HHsearch alignment for GI: 254780859 and conserved domain: cd02753
>cd02753 MopB_Formate-Dh-H Formate dehydrogenase H (Formate-Dh-H) catalyzes the reversible oxidation of formate to CO2 with the release of a proton and two electrons. It is a component of the anaerobic formate hydrogen lyase complex. The E. coli formate dehydrogenase H (Fdh-H) is a monomer composed of a single polypeptide chain with a Mo active site region and a [4Fe-4S] center. Members of the MopB_Formate-Dh-H CD belong to the molybdopterin_binding (MopB) superfamily of proteins.
Probab=100.00 E-value=0 Score=639.51 Aligned_cols=398 Identities=26% Similarity=0.328 Sum_probs=343.0
Q ss_pred EECCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCEECCCCCCCCCHHH-HCCCCHHHEECCCCEEECCHHHHHHHHHH
Q ss_conf 20121168864366751599998852478887777411355422100000-00011011002222023241456688875
Q gi|254780859|r 231 DSIDVMDALGSAIRIDARGCEVMRILPRINESINEEWISDKTRFIWDGLK-VQRLDCPYARINGRLKPVSWDYALKAIKS 309 (700)
Q Consensus 231 ~SvC~~C~~GC~i~v~v~~g~i~rv~~~~~~~vN~g~lC~KGRf~~d~~~-~dRL~~PliR~~g~~~~iSWdeAl~~ia~ 309 (700)
T Consensus 1 kT~C~~C~~gC~i~v~v~dg~v~rv~g~~~~p~n~g~lC~kG~~~~~~~~~pdRl~~Pl~R~~g~~~~isWdeAl~~ia~ 80 (512)
T cd02753 1 KTVCPYCGVGCGLELWVKDNKIVGVEPVKGHPVNRGKLCVKGRFGFDFVNSKDRLTKPLIRKNGKFVEASWDEALSLVAS 80 (512)
T ss_pred CCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCEEEEECHHHHHHHHHH
T ss_conf 94795973689928999999999987789898787553787986888747984316981941992789139999999999
Q ss_pred HHCCCCCCEE-----EEECCCCCCHHHHHHHHHHHH-CCCCCEECCCCCCCCCHHHHC----CCCCCCCCHHHHHCCCEE
Q ss_conf 2013445314-----785043232355547889863-687724202334446643401----254677878774018579
Q gi|254780859|r 310 AVLSSDVKLG-----AVVGDLSSVEEIYALKLLMQS-LGCENFDCRQNGEYLDPSYGR----ASYIFNPTIQGIEEADAM 379 (700)
Q Consensus 310 ~L~~~~~~~g-----~~~g~~~t~Ee~y~~k~l~~~-lGt~nid~~~~~~~~~~~~~~----~~~~~~~~i~die~ad~i 379 (700)
T Consensus 81 kl~~i~~~~G~~~i~~~~s~~~~~e~~~~~~~~~~~~~gs~~~d~~~~~c~~~~~~~~~~~~G~~~~~~~~~D~~~ad~i 160 (512)
T cd02753 81 RLKEIKDKYGPDAIAFFGSAKCTNEENYLFQKLARAVGGTNNVDHCARLCHSPTVAGLAETLGSGAMTNSIADIEEADVI 160 (512)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHCCEE
T ss_conf 99999987199849999069875077999999998548985015877655417888999970889888898789739889
Q ss_pred EEECCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHH---HHCCCC------------------------------
Q ss_conf 99738532257310257789997599706616850122334---430489------------------------------
Q gi|254780859|r 380 LIIGSNPRLEAAVLNARIRKRWRRGNFPIAVIGDVGELRYK---YEHLGN------------------------------ 426 (700)
Q Consensus 380 lliG~Np~~~~Pvl~~rirka~~~g~~~I~vi~~~~~l~~~---~~~l~~------------------------------ 426 (700)
T Consensus 161 l~~G~N~~~~~p~~~~~i~~a~~~Gak~vviDPr~t~ta~~Ad~~l~irPGtD~al~~a~~~~ii~~~~~d~~fi~~~t~ 240 (512)
T cd02753 161 LVIGSNTTEAHPVIARRIKRAKRNGAKLIVADPRRTELARFADLHLQLRPGTDVALLNAMAHVIIEEGLYDEEFIEERTE 240 (512)
T ss_pred EEECCCCHHHCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCCCCHHHHHHHCC
T ss_conf 99898804667899999999987898799946866707887552425688942877647635850066645145776057
Q ss_pred CHHHHHHHHCCCC----------------HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8678888826877----------------889998723531023544332104746989898999887410585334754
Q gi|254780859|r 427 GSEALADLVSGQH----------------PFFKKLQEATRPLIIVGQGALRASDNVEVMANIAKLVIDVGGISDSWNGFA 490 (700)
Q Consensus 427 ~~e~l~~~~~g~~----------------~~~~~l~~a~~~~ii~G~g~~~~~~g~~~~~al~~l~~~~G~ig~~g~G~~ 490 (700)
T Consensus 241 gf~~~~~~~~~~tpe~~a~itgv~~~~I~~~A~~~a~~~~~~i~~g~g~~~~~~g~~~~~ai~~L~~ltG~~g~~G~g~~ 320 (512)
T cd02753 241 GFEELKEIVEKYTPEYAERITGVPAEDIREAARMYATAKSAAILWGMGVTQHSHGTDNVMALSNLALLTGNIGRPGTGVN 320 (512)
T ss_pred CHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 79999998650899999988598899999999999756987999660440030069999999999998478899886606
Q ss_pred CCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCCCEEEECCCCHHH----------CCCCCCEEEHHHHHHHHHHHHCCEEE
Q ss_conf 24675310452101776586523688886016759980764220----------16654345022116666887455770
Q gi|254780859|r 491 VLHTVASRVGALDLGFVPADDTINAMNILDKTDIVFLLGADELD----------FSDKQALTVYIGSHGDRGAQSADVIL 560 (700)
Q Consensus 491 ~L~~~~n~~Ga~d~g~~P~~~~~~~~~~~~~~~~l~~~g~d~l~----------~~~~~~fvV~~d~~~t~tA~~ADVVL 560 (700)
T Consensus 321 p~~g~~n~~g~~~~g~~~~~~-------pg~ikal~v~g~Np~~~~pd~~~~~~al~k~df~Vv~d~~~t~Ta~~ADiVL 393 (512)
T cd02753 321 PLRGQNNVQGACDMGALPNVL-------PGYVKALYIMGENPALSDPNTNHVRKALESLEFLVVQDIFLTETAELADVVL 393 (512)
T ss_pred CCCCCCCCCHHHHHCCCCCCC-------CCCCEEEEEECCCHHHHCCCHHHHHHHHHCCCEEEEECCCCCCCHHHHCEEC
T ss_conf 256875310166623595438-------8741699993778543086878999886479959996388895366616014
Q ss_pred CCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 478620247208820886742044328855574079999999998077996879899999999978111055422
Q gi|254780859|r 561 PGAAYTEKSGLWVNTEGRVQMGMRAIFPPGDAKEDWEIICALADELKCSLPFSSLSQLRSHLYSHHPHFMQLDEI 635 (700)
Q Consensus 561 P~a~~~Ek~Gtf~N~EgRvQ~~~~av~p~geak~dw~Il~~La~~LG~~~~~~~~~ei~~ei~~~~P~~~~~~~~ 635 (700)
T Consensus 394 Paat~~E~~g~~~n~e~~v~~~~~~i~P~geak~d~~I~~~La~~lG~~~~~~~~~~~~~~~~~~~~~~~g~t~e 468 (512)
T cd02753 394 PAASFAEKDGTFTNTERRVQRVRKAVEPPGEARPDWEIIQELANRLGYPGFYSHPEEIFDEIARLTPQYAGISYE 468 (512)
T ss_pred CCCCCCCCCCEEECCCCEEEEECCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHH
T ss_conf 456434457517826883898566558930036399999999998389987899999999999858475899899