HHsearch alignment for GI: 254780859 and conserved domain: cd02770
>cd02770 MopB_DmsA-EC This CD (MopB_DmsA-EC) includes the DmsA enzyme of the dmsABC operon encoding the anaerobic dimethylsulfoxide reductase (DMSOR) of Escherichia coli and other related DMSOR-like enzymes. Unlike other DMSOR-like enzymes, this group has a predicted N-terminal iron-sulfur [4Fe-4S] cluster binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.
Probab=100.00 E-value=0 Score=489.79 Aligned_cols=392 Identities=17% Similarity=0.200 Sum_probs=287.6
Q ss_pred ECCCC-CCCCCEEEEECCCCEEEEEECCCCCCCCCCE----ECCCCCCCCCHH-HHCCCCHHHEECC----CCEEECCHH
Q ss_conf 01211-6886436675159999885247888777741----135542210000-0000110110022----220232414
Q gi|254780859|r 232 SIDVM-DALGSAIRIDARGCEVMRILPRINESINEEW----ISDKTRFIWDGL-KVQRLDCPYARIN----GRLKPVSWD 301 (700)
Q Consensus 232 SvC~~-C~~GC~i~v~v~~g~i~rv~~~~~~~vN~g~----lC~KGRf~~d~~-~~dRL~~PliR~~----g~~~~iSWd 301 (700)
T Consensus 2 s~C~~nC~~~C~i~v~V~dG~v~kv~g~~~~p~~~g~~~~r~C~KG~~~~~~~y~pdRl~~PLkR~g~rG~g~f~~ISWd 81 (617)
T cd02770 2 SACTVNCGGRCPLKAHVKDGVITRIETDDTGDDDPGFHQIRACLRGRSQRKRVYNPDRLKYPMKRVGKRGEGKFVRISWD 81 (617)
T ss_pred CCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHCCCEEECCCCCCCCEEEECHH
T ss_conf 63079988898869999999999998479998999988868986835338876597540388161799889987894699
Q ss_pred HHHHHHHHHHCCCCCCEEE--E---ECCCCCCHHHH---HHHHHHHHCCCCCEECCCCCCCCCHHHH----CCCCCCCCC
Q ss_conf 5668887520134453147--8---50432323555---4788986368772420233444664340----125467787
Q gi|254780859|r 302 YALKAIKSAVLSSDVKLGA--V---VGDLSSVEEIY---ALKLLMQSLGCENFDCRQNGEYLDPSYG----RASYIFNPT 369 (700)
Q Consensus 302 eAl~~ia~~L~~~~~~~g~--~---~g~~~t~Ee~y---~~k~l~~~lGt~nid~~~~~~~~~~~~~----~~~~~~~~~ 369 (700)
T Consensus 82 EAl~~IA~kl~~i~~~~G~~si~~~~g~g~~~~~~~~~~~~~r~~~~~g~-~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 160 (617)
T cd02770 82 EALDTIASELKRIIEKYGNEAIYVNYGTGTYGGVPAGRGAIARLLNLTGG-YLNYYGTYSWAQITTATPYTYGAAASGSS 160 (617)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHEECCCCCCC
T ss_conf 99999999999999874964599953588766305689999999997089-87899887377899999987618888898
Q ss_pred HHHHHCCCEEEEECCCCCCCCCCHH---HHHHHHHHCCCCEEECCCCCHHHH----HHHHCCCCCHH-------------
Q ss_conf 8774018579997385322573102---577899975997066168501223----34430489867-------------
Q gi|254780859|r 370 IQGIEEADAMLIIGSNPRLEAAVLN---ARIRKRWRRGNFPIAVIGDVGELR----YKYEHLGNGSE------------- 429 (700)
Q Consensus 370 i~die~ad~illiG~Np~~~~Pvl~---~rirka~~~g~~~I~vi~~~~~l~----~~~~~l~~~~e------------- 429 (700)
T Consensus 161 ~~D~~~a~~il~~G~Np~~t~~~~~~~~~~~~~ak~~GaklIvVDPr~t~ta~~~AD~wlpirPGTD~ALalam~~vii~ 240 (617)
T cd02770 161 LDDLKDSKLVVLFGHNPAETRMGGGGSTYYYLQAKKAGAKFIVIDPRYTDTAVTLADEWIPIRPGTDAALVAAMAYVMIT 240 (617)
T ss_pred HHHHHHCCEEEEECCCHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 76897497999986888995788650789999998779869996798773577751785066788489999999999997
Q ss_pred -------HHHHHHCCCC---------------------------------------------HHHHHHHHCCCCHHHHHH
Q ss_conf -------8888826877---------------------------------------------889998723531023544
Q gi|254780859|r 430 -------ALADLVSGQH---------------------------------------------PFFKKLQEATRPLIIVGQ 457 (700)
Q Consensus 430 -------~l~~~~~g~~---------------------------------------------~~~~~l~~a~~~~ii~G~ 457 (700)
T Consensus 241 e~l~D~~Fv~~~t~Gfd~~~~~~~~~~~~~~~~~v~~~~~d~~~~TPE~aa~itGV~ae~I~~lAr~~a~~~~~~i~~g~ 320 (617)
T cd02770 241 ENLHDQAFLDRYCVGFDAEHLPEGAPPNESYKDYVLGTGYDGTPKTPEWASEITGVPAETIRRLAREIATTKPAAILQGW 320 (617)
T ss_pred CCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 78746899998706757221312465467799997033434665899999998895999999999999724883899574
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH-HCCCCCCCCCCCHH--------------------
Q ss_conf 332104746989898999887410585334754246753104521-01776586523688--------------------
Q gi|254780859|r 458 GALRASDNVEVMANIAKLVIDVGGISDSWNGFAVLHTVASRVGAL-DLGFVPADDTINAM-------------------- 516 (700)
Q Consensus 458 g~~~~~~g~~~~~al~~l~~~~G~ig~~g~G~~~L~~~~n~~Ga~-d~g~~P~~~~~~~~-------------------- 516 (700)
T Consensus 321 G~~~~~~g~~~~rai~~L~aLtGnig~pGg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (617)
T cd02770 321 GPQRHANGEQAARAIMMLAAMTGNVGIPGGNTGARPGGSAYNGAGLPAGKNPVKTSIPCFMWTDAIERGEEMTADDGGVK 400 (617)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 30103348999999999999976899989736777654456887766677864441242356566653454654322103
Q ss_pred ---HHHHCCCEEEECCCCHHH---------------CCCCCCEEEHHHHHHHHHHHHCCEEECCCCCCCCCCEEEEECC-
Q ss_conf ---886016759980764220---------------1665434502211666688745577047862024720882088-
Q gi|254780859|r 517 ---NILDKTDIVFLLGADELD---------------FSDKQALTVYIGSHGDRGAQSADVILPGAAYTEKSGLWVNTEG- 577 (700)
Q Consensus 517 ---~~~~~~~~l~~~g~d~l~---------------~~~~~~fvV~~d~~~t~tA~~ADVVLP~a~~~Ek~Gtf~N~Eg- 577 (700)
T Consensus 401 ~~~~~~~~ik~l~~~~~n~l~~~~~~~~~~~~~~~~~~~kl~f~Vv~D~~~teTa~~ADiVLPa~t~~Er~d~~~~~~~~ 480 (617)
T cd02770 401 GADKLKSNIKMIWNYAGNTLINQHSDDNNTTRALLDDESKCEFIVVIDNFMTPSARYADILLPDTTELEREDIVLTSNAG 480 (617)
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECEECCCHHHCCEEECCCCHHHCCCCCCCCCCC
T ss_conf 54335788589999078850247874048999998444159869997145663453172893588632137741367888
Q ss_pred ---EEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCC---CCHHHHHHHHHH
Q ss_conf ---67420443288555740799999999980779968---798999999999
Q gi|254780859|r 578 ---RVQMGMRAIFPPGDAKEDWEIICALADELKCSLPF---SSLSQLRSHLYS 624 (700)
Q Consensus 578 ---RvQ~~~~av~p~geak~dw~Il~~La~~LG~~~~~---~~~~ei~~ei~~ 624 (700)
T Consensus 481 ~~~~~~~~~~ai~P~gEak~d~~I~~~La~rlG~~~~f~~~~~~~~~~~~~~~ 533 (617)
T cd02770 481 MMEYLIYSQKAIEPLYECKSDYEICAELAKRLGVEDQFTEGKTEQEWLEELYG 533 (617)
T ss_pred CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 71289980667589645768999999999980996536899999999999999