HHsearch alignment for GI: 254780860 and conserved domain: MTH00010

>MTH00010 ND1 NADH dehydrogenase subunit 1; Validated.
Probab=100.00  E-value=0  Score=635.45  Aligned_cols=306  Identities=41%  Similarity=0.711  Sum_probs=285.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             99999999999999999999999999999972789985744531888999999986305464535403898589899999
Q gi|254780860|r   15 MAIKSIVFLVGLLIFIAYVLLMDRKVWAAVQLRRGPNVVGPWGLLQSFADFLKFVFKEPIIPSKSNKILFLLAPLVSVIL   94 (348)
Q Consensus        15 ~~i~~i~~~i~~l~~~~f~~~~eRKi~A~iQ~R~GP~~vg~~GilQp~~D~~KL~~Ke~i~p~~~~~~~f~~~P~i~~~~   94 (348)
T Consensus         5 ~~~~~l~~~i~~ll~vaf~tl~ERKila~~Q~R~GPn~vg~~GllQp~aD~~KLl~Ke~i~p~~~~~~~f~~aP~~~~~~   84 (311)
T MTH00010          5 FFTSILISYIMALLAMAFYTLLERKALGYFQLRKGPNKVGLMGIPQPFADAIKLFTKEQAKPMPANYTPFLLAPMMSLIL   84 (311)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999999999999999654808096673564599999999987067775420499999999999999


Q ss_pred             HHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             98665318785523564050578999999999999999987512443210123344310136787668999999998237
Q gi|254780860|r   95 SLSAWAVVPVADGWIIADINVGILYILAISSLEIYGIIIGGWASNSKYAFLGALRSAAQMISYEVSIGLVIVTVVLCAGS  174 (348)
Q Consensus        95 ~~~~~~~iP~~~~~~~~~~~~~ll~~~~l~sl~~~~i~l~G~~S~s~ys~iG~~R~~~q~isyE~~l~l~i~~~~l~~gs  174 (348)
T Consensus        85 ~~~~~~~~P~~~~~~--~~~~~ll~~l~l~sl~~~~~~l~GwsS~skYs~iGa~R~~aq~iSYEv~l~l~~~~~~~~~~s  162 (311)
T MTH00010         85 ALLLWSLYPFSHPSF--FLKFSVLYFLCISSMNVYTTLAAGWSSNSKYALLGALRSVAQTISYEVSMSLILLSALCLLLS  162 (311)
T ss_pred             HHHHHHHHCCCCCHH--HHCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999998704565125--523029999998889998867025445886477407588999997788899999999999667


Q ss_pred             CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf             89899999851000022111124466699999989999999976875430100357608888987543023201158899
Q gi|254780860|r  175 LNLTDIVYSQKSGLGTFLGFPPSMLDWYWLALFPMFVVFFISLLAETNRPPFDLSEAESELVAGYMVEYSSTPYLLFMLA  254 (348)
Q Consensus       175 ~~~~~iv~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~lae~~R~PFD~~EaEsELv~G~~tEYsG~~~~l~~l~  254 (348)
T Consensus       163 ~~l~~i~~~q~~--------------~~~~~~~p~~~~~~i~~laE~nR~PFDl~EaEsELVsG~~tEYsg~~f~l~fla  228 (311)
T MTH00010        163 FDFSKMITNQYS--------------WILLMTIPLFFSWFITTLAETNRTPFDLAEGESELVSGFNVEYSSGLFALIFMA  228 (311)
T ss_pred             CCHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEHHHCCCHHHHHHHHH
T ss_conf             869999999999--------------999999999999999999983899999886526562121232178789999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999999997323655431223666656899999999999999999997410125499998854278999999999
Q gi|254780860|r  255 EYSTIVLMCTLASILFLGGWLPPFDISLFKSIPGFFWLVFKTLGLFFMVAMVKAFVPRYRYDQLMRLGWKVFLPLSFAMV  334 (348)
Q Consensus       255 ey~~~~~~s~l~~~lFlGg~~~p~~~~~~~~l~~~~~~~~k~~~~~~~~i~ir~~~pR~R~Dq~~~~~Wk~llpl~l~~~  334 (348)
T Consensus       229 EY~~~~~~s~l~~~lFlg~~~~~--------~~~~~~~~lk~~~~~~~~i~iR~~~PR~R~Dqlm~l~Wk~llPlsl~~l  300 (311)
T MTH00010        229 EYANILIMCLFSSAIFMSSSPTF--------FISDAMLILKTFTLAFLFVWIRATFPRMRYDHLMNLTWKSFLPMSLTSL  300 (311)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCHH--------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999972877301--------4789999999999999999999827446199989987899999999999


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999999
Q gi|254780860|r  335 LIVSFFLKIY  344 (348)
Q Consensus       335 ~~~~~~~~~~  344 (348)
T Consensus       301 ~~~~~i~l~~  310 (311)
T MTH00010        301 MISISIMLLF  310 (311)
T ss_pred             HHHHHHHHHH
T ss_conf             9999999996