HHsearch alignment for GI: 254780860 and conserved domain: MTH00010
>MTH00010 ND1 NADH dehydrogenase subunit 1; Validated.
Probab=100.00 E-value=0 Score=635.45 Aligned_cols=306 Identities=41% Similarity=0.711 Sum_probs=285.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999972789985744531888999999986305464535403898589899999
Q gi|254780860|r 15 MAIKSIVFLVGLLIFIAYVLLMDRKVWAAVQLRRGPNVVGPWGLLQSFADFLKFVFKEPIIPSKSNKILFLLAPLVSVIL 94 (348)
Q Consensus 15 ~~i~~i~~~i~~l~~~~f~~~~eRKi~A~iQ~R~GP~~vg~~GilQp~~D~~KL~~Ke~i~p~~~~~~~f~~~P~i~~~~ 94 (348)
T Consensus 5 ~~~~~l~~~i~~ll~vaf~tl~ERKila~~Q~R~GPn~vg~~GllQp~aD~~KLl~Ke~i~p~~~~~~~f~~aP~~~~~~ 84 (311)
T MTH00010 5 FFTSILISYIMALLAMAFYTLLERKALGYFQLRKGPNKVGLMGIPQPFADAIKLFTKEQAKPMPANYTPFLLAPMMSLIL 84 (311)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999654808096673564599999999987067775420499999999999999
Q ss_pred HHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 98665318785523564050578999999999999999987512443210123344310136787668999999998237
Q gi|254780860|r 95 SLSAWAVVPVADGWIIADINVGILYILAISSLEIYGIIIGGWASNSKYAFLGALRSAAQMISYEVSIGLVIVTVVLCAGS 174 (348)
Q Consensus 95 ~~~~~~~iP~~~~~~~~~~~~~ll~~~~l~sl~~~~i~l~G~~S~s~ys~iG~~R~~~q~isyE~~l~l~i~~~~l~~gs 174 (348)
T Consensus 85 ~~~~~~~~P~~~~~~--~~~~~ll~~l~l~sl~~~~~~l~GwsS~skYs~iGa~R~~aq~iSYEv~l~l~~~~~~~~~~s 162 (311)
T MTH00010 85 ALLLWSLYPFSHPSF--FLKFSVLYFLCISSMNVYTTLAAGWSSNSKYALLGALRSVAQTISYEVSMSLILLSALCLLLS 162 (311)
T ss_pred HHHHHHHHCCCCCHH--HHCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999998704565125--523029999998889998867025445886477407588999997788899999999999667
Q ss_pred CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 89899999851000022111124466699999989999999976875430100357608888987543023201158899
Q gi|254780860|r 175 LNLTDIVYSQKSGLGTFLGFPPSMLDWYWLALFPMFVVFFISLLAETNRPPFDLSEAESELVAGYMVEYSSTPYLLFMLA 254 (348)
Q Consensus 175 ~~~~~iv~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~lae~~R~PFD~~EaEsELv~G~~tEYsG~~~~l~~l~ 254 (348)
T Consensus 163 ~~l~~i~~~q~~--------------~~~~~~~p~~~~~~i~~laE~nR~PFDl~EaEsELVsG~~tEYsg~~f~l~fla 228 (311)
T MTH00010 163 FDFSKMITNQYS--------------WILLMTIPLFFSWFITTLAETNRTPFDLAEGESELVSGFNVEYSSGLFALIFMA 228 (311)
T ss_pred CCHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEHHHCCCHHHHHHHHH
T ss_conf 869999999999--------------999999999999999999983899999886526562121232178789999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999997323655431223666656899999999999999999997410125499998854278999999999
Q gi|254780860|r 255 EYSTIVLMCTLASILFLGGWLPPFDISLFKSIPGFFWLVFKTLGLFFMVAMVKAFVPRYRYDQLMRLGWKVFLPLSFAMV 334 (348)
Q Consensus 255 ey~~~~~~s~l~~~lFlGg~~~p~~~~~~~~l~~~~~~~~k~~~~~~~~i~ir~~~pR~R~Dq~~~~~Wk~llpl~l~~~ 334 (348)
T Consensus 229 EY~~~~~~s~l~~~lFlg~~~~~--------~~~~~~~~lk~~~~~~~~i~iR~~~PR~R~Dqlm~l~Wk~llPlsl~~l 300 (311)
T MTH00010 229 EYANILIMCLFSSAIFMSSSPTF--------FISDAMLILKTFTLAFLFVWIRATFPRMRYDHLMNLTWKSFLPMSLTSL 300 (311)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHH--------HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999972877301--------4789999999999999999999827446199989987899999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780860|r 335 LIVSFFLKIY 344 (348)
Q Consensus 335 ~~~~~~~~~~ 344 (348)
T Consensus 301 ~~~~~i~l~~ 310 (311)
T MTH00010 301 MISISIMLLF 310 (311)
T ss_pred HHHHHHHHHH
T ss_conf 9999999996