HHsearch alignment for GI: 254780861 and conserved domain: COG1140
>COG1140 NarY Nitrate reductase beta subunit [Energy production and conversion].
Probab=91.92 E-value=0.079 Score=31.02 Aligned_cols=50 Identities=36% Similarity=0.638 Sum_probs=30.9
Q ss_pred CEECC--CCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCHHHCCCCEEECC
Q ss_conf 21345--223253308832101224544733577888505555868872333783103036
Q gi|254780861|r 63 CIACK--LCEAICPAQAITIESGPRCHDGTRRTVRYDIDMIKCIYCGLCQEACPVDAIVEG 121 (163)
Q Consensus 63 Ci~C~--~C~~~CP~~aI~i~~~~~~~~~~~~~~~~~id~~~Ci~Cg~Cv~vCP~~AI~~~ 121 (163)
T Consensus 183 CeHCLNPsCvasCPsgaiY----KReEDGIV-----LiDQd~CRGwR~CvsgCPYKKvYfN 234 (513)
T COG1140 183 CEHCLNPSCVASCPSGAIY----KREEDGIV-----LIDQDKCRGWRMCVSGCPYKKVYFN 234 (513)
T ss_pred HHHCCCCHHHHCCCCCCCC----CCCCCCEE-----EEECCCCCCHHHHHCCCCCCEEEEE
T ss_conf 7641891886328865521----14668669-----9612324403444137984136763