HHsearch alignment for GI: 254780861 and conserved domain: COG3383

Probab=99.20  E-value=4.1e-12  Score=94.04  Aligned_cols=83  Identities=30%  Similarity=0.616  Sum_probs=60.0

Q ss_pred             CCCCCCCCC-CCCCHHCCCEEEEEECCCCCCCEECCCCHHHHH----HCCCCCCCCCCCCCCCEEEE--EEEEEHHHCCC
Q ss_conf             225787577-568000572378740588742213452232533----08832101224544733577--88850555586
Q gi|254780861|r   33 TINYPFEKG-STSPRFRGEHALRRYPNGEERCIACKLCEAICP----AQAITIESGPRCHDGTRRTV--RYDIDMIKCIY  105 (163)
Q Consensus        33 T~~YP~e~~-~~~~rfRG~~~l~~~~~~~ekCi~C~~C~~~CP----~~aI~i~~~~~~~~~~~~~~--~~~id~~~Ci~  105 (163)
T Consensus       123 ~q~y~y~~k~~~~~~Des~Pfy~ydp~---qCIlCgRCVeaCqevqv~eaL~i~w~~~~p---RV~wd~~~~i~~SSCVs  196 (978)
T COG3383         123 EQRYPYEEKNPPYPKDESNPFYIYDPN---QCILCGRCVEACQEVQVNEALTIDWRGEDP---RVIWDNDVPINESSCVS  196 (978)
T ss_pred             CCCCCCCCCCCCCCCCCCCCEEEECCH---HEEEHHHHHHHHHHHHCEEEEEEECCCCCC---CEECCCCCCCCCCCCCC
T ss_conf             433676655788875567970875622---424256899998764133699861146776---03347897553012554


Q ss_pred             CCCCHHHCCCCEEECC
Q ss_conf             8872333783103036
Q gi|254780861|r  106 CGLCQEACPVDAIVEG  121 (163)
Q Consensus       106 Cg~Cv~vCP~~AI~~~  121 (163)
T Consensus       197 CG~CvtVCP~nALmek  212 (978)
T COG3383         197 CGACVTVCPVNALMEK  212 (978)
T ss_pred             CCCCCEECCHHHHHHH
T ss_conf             5760201560564312