HHsearch alignment for GI: 254780861 and conserved domain: PRK05352

>PRK05352 Na(+)-translocating NADH-quinone reductase subunit A; Provisional.
Probab=96.30  E-value=0.00034  Score=45.55  Aligned_cols=56  Identities=20%  Similarity=0.290  Sum_probs=34.5

Q ss_pred             CCCCC-CEECCCCHHHHHHCCCCCC--CCCCCCCCCEEEEEEEEEHHHCCC--CCCCHHHCCCC
Q ss_conf             88742-2134522325330883210--122454473357788850555586--88723337831
Q gi|254780861|r   58 NGEER-CIACKLCEAICPAQAITIE--SGPRCHDGTRRTVRYDIDMIKCIY--CGLCQEACPVD  116 (163)
Q Consensus        58 ~~~ek-Ci~C~~C~~~CP~~aI~i~--~~~~~~~~~~~~~~~~id~~~Ci~--Cg~Cv~vCP~~  116 (163)
T Consensus       370 nG~~Ra~I~~g~~e~v~P~di~P~qL~ka~~~~d~e~~-e--~lGi~e~~eED~alcsyvCpSK  430 (448)
T PRK05352        370 NGSERAMVPIGNYERVMPLDILPTLLLRALIAGDTDEA-Q--ALGALELDEEDLALCTFVCPGK  430 (448)
T ss_pred             CCCCCCEEECCHHHHHCCCCCCHHHHHHHHHCCCHHHH-H--HCCCCCCCHHHCCEEEEECCCH
T ss_conf             88644378867476427885689999999870699999-8--7599033853641464588861