HHsearch alignment for GI: 254780861 and conserved domain: PRK06273
>PRK06273 ferredoxin; Provisional.
Probab=98.68 E-value=1.3e-09 Score=78.73 Aligned_cols=143 Identities=24% Similarity=0.385 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCHHCCCEEEEEECCCCCCCEECCCCHHHHHHCCCCCCCCC
Q ss_conf 999999999999999999998406-9852257875775680005723787405887422134522325330883210122
Q gi|254780861|r 6 CNVSFLFLKEFVGAFFLCLRYFFK-AKTTINYPFEKGSTSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIESGP 84 (163)
Q Consensus 6 ~~~~~~~~~~~~~gl~~t~k~~~~-~~~T~~YP~e~~~~~~rfRG~~~l~~~~~~~ekCi~C~~C~~~CP~~aI~i~~~~ 84 (163)
T Consensus 4 k~~~ki~l~G~Y~Nle---RIifgsdr~Td~Emr-----~~IL~G~Ve~~~-~V~e~~CIGC~GCaNvCPT~AIeM~~~e 74 (163)
T PRK06273 4 KNLAKVFISGIYENLE---RIIFGSDRYTSKEMR-----AEILTGNVELPK-KVFEELCIGCGGCANACPTKAIEMIPVE 74 (163)
T ss_pred HHHHHHHHHHHHHHHH---HHEECCCCCCCHHHH-----HHHHCCCCCCCH-HHHHHHCCCCCCCCCCCCCCCEEEEECC
T ss_conf 8888999987775145---403336753309999-----999728756876-6758864365550023887755777656
Q ss_pred CCC--CCCEEEEEEEEEHHHCCCCCCCHHHCCCCEEEC--CCCCCCCCCCHHHHCCCHHHHHHH----HHHHHHHHHHHH
Q ss_conf 454--473357788850555586887233378310303--677356757687733299999884----899999998507
Q gi|254780861|r 85 RCH--DGTRRTVRYDIDMIKCIYCGLCQEACPVDAIVE--GPNFEFATETRQELYYDKERLLNN----GDRWESEIVRNI 156 (163)
Q Consensus 85 ~~~--~~~~~~~~~~id~~~Ci~Cg~Cv~vCP~~AI~~--~~~~e~a~~~r~~l~~~k~~Ll~~----g~~~~~~~~~~~ 156 (163)
T Consensus 75 PVkite~~vK~~iP~id~ekCV~C~yCHDFCPvfslF~E~spIHPr~VGe-~~i~vD~~klL~kpveIseeql~~Is~~L 153 (163)
T PRK06273 75 PVKITETYVKEAIPKIDYEKCVYCLYCHDFCPVFALFNEISPIHPRHVGE-DLVDVDLSKLLEKPVEISEEQLSKIAQIL 153 (163)
T ss_pred CEEEECCHHHHCCCCCCHHHEEEEEECCCCCHHHHHHCCCCCCCCCCCCC-HHHHCCHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 56741103331266467332079887365243889854667768642241-00003599985585558999999999885
Q ss_pred HH
Q ss_conf 74
Q gi|254780861|r 157 VT 158 (163)
Q Consensus 157 ~~ 158 (163)
T Consensus 154 s~ 155 (163)
T PRK06273 154 SI 155 (163)
T ss_pred EE
T ss_conf 13