HHsearch alignment for GI: 254780861 and conserved domain: PRK09476
>PRK09476 napG quinol dehydrogenase periplasmic component; Provisional.
Probab=98.42 E-value=1.8e-07 Score=65.52 Aligned_cols=54 Identities=31% Similarity=0.731 Sum_probs=28.2
Q ss_pred CCEECCCCHHHHHHCCCCCCCCCC-CCCCCEEEEEEEEEHHHCCCCC--CCHHHCCCCEE
Q ss_conf 221345223253308832101224-5447335778885055558688--72333783103
Q gi|254780861|r 62 RCIACKLCEAICPAQAITIESGPR-CHDGTRRTVRYDIDMIKCIYCG--LCQEACPVDAI 118 (163)
Q Consensus 62 kCi~C~~C~~~CP~~aI~i~~~~~-~~~~~~~~~~~~id~~~Ci~Cg--~Cv~vCP~~AI 118 (163)
T Consensus 60 ~CirCG~Cv~aCPy~tl~la~~~~~~~~GTPy---~~pr~~pC~mC~dipCv~aCPTGAL 116 (254)
T PRK09476 60 ACIRCGLCVQACPYDTLKLATLASGLSAGTPY---FVARDIPCEMCEDIPCVKACPSGAL 116 (254)
T ss_pred HCCHHCCHHHHCCHHHEECCCCCCCCCCCCCE---ECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 63032403655876243326666787478821---5556577204789753156886646