HHsearch alignment for GI: 254780861 and conserved domain: PRK09477

>PRK09477 napH quinol dehydrogenase membrane component; Provisional.
Probab=99.13  E-value=1.3e-11  Score=91.01  Aligned_cols=64  Identities=20%  Similarity=0.526  Sum_probs=45.3

Q ss_pred             CCCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCHHHCCCCEEECCCCCCCC
Q ss_conf             8874221345223253308832101224544733577888505555868872333783103036773567
Q gi|254780861|r   58 NGEERCIACKLCEAICPAQAITIESGPRCHDGTRRTVRYDIDMIKCIYCGLCQEACPVDAIVEGPNFEFA  127 (163)
Q Consensus        58 ~~~ekCi~C~~C~~~CP~~aI~i~~~~~~~~~~~~~~~~~id~~~Ci~Cg~Cv~vCP~~AI~~~~~~e~a  127 (163)
T Consensus       221 ~~~~~C~~C~~C~~VCP~~~v-ir~~l~~~~~~-----~~v~~~eCI~CG~CIDvC~~~al~f~~r~~~~  284 (287)
T PRK09477        221 HDREKCTRCMDCFHVCPEPQV-LRPPLKGKQSS-----PQVLSGDCTTCGRCIDVCSEDVFNFTIRFKSG  284 (287)
T ss_pred             CCCCCCCCCCHHHHHCCCCCC-CCHHHCCCCCC-----CCCCCCCCCCHHHHHHHHCCCCEEEEEECCCC
T ss_conf             788758092357675799542-44443144446-----88488310536599967181551544212788