HHsearch alignment for GI: 254780861 and conserved domain: PRK09477
>PRK09477 napH quinol dehydrogenase membrane component; Provisional.
Probab=99.13 E-value=1.3e-11 Score=91.01 Aligned_cols=64 Identities=20% Similarity=0.526 Sum_probs=45.3
Q ss_pred CCCCCCEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCHHHCCCCEEECCCCCCCC
Q ss_conf 8874221345223253308832101224544733577888505555868872333783103036773567
Q gi|254780861|r 58 NGEERCIACKLCEAICPAQAITIESGPRCHDGTRRTVRYDIDMIKCIYCGLCQEACPVDAIVEGPNFEFA 127 (163)
Q Consensus 58 ~~~ekCi~C~~C~~~CP~~aI~i~~~~~~~~~~~~~~~~~id~~~Ci~Cg~Cv~vCP~~AI~~~~~~e~a 127 (163)
T Consensus 221 ~~~~~C~~C~~C~~VCP~~~v-ir~~l~~~~~~-----~~v~~~eCI~CG~CIDvC~~~al~f~~r~~~~ 284 (287)
T PRK09477 221 HDREKCTRCMDCFHVCPEPQV-LRPPLKGKQSS-----PQVLSGDCTTCGRCIDVCSEDVFNFTIRFKSG 284 (287)
T ss_pred CCCCCCCCCCHHHHHCCCCCC-CCHHHCCCCCC-----CCCCCCCCCCHHHHHHHHCCCCEEEEEECCCC
T ss_conf 788758092357675799542-44443144446-----88488310536599967181551544212788