HHsearch alignment for GI: 254780861 and conserved domain: TIGR00397

>TIGR00397 mauM_napG MauM/NapG family ferredoxin-type protein; InterPro: IPR004494 MauM ferredoxin-type protein is involved in methylamine utilization. NapG ferredoxin-type protein is associated with nitrate reductase activity.; GO: 0006118 electron transport.

Probab=97.38  E-value=5.5e-05  Score=50.38  Aligned_cols=66  Identities=30%  Similarity=0.661  Sum_probs=44.6

Q ss_pred             CCCEEEEEECCCCCCC-----EECCCCHHHHHH--CCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCCCCHHHCCCC--EE
Q ss_conf             5723787405887422-----134522325330--88321012245447335778885055558688723337831--03
Q gi|254780861|r   48 RGEHALRRYPNGEERC-----IACKLCEAICPA--QAITIESGPRCHDGTRRTVRYDIDMIKCIYCGLCQEACPVD--AI  118 (163)
Q Consensus        48 RG~~~l~~~~~~~ekC-----i~C~~C~~~CP~--~aI~i~~~~~~~~~~~~~~~~~id~~~Ci~Cg~Cv~vCP~~--AI  118 (163)
T Consensus       122 MGVAVLV----gHETCLNYKGL~CSICVRVCPI~G~AISL~~~~~---~~~~l~IP~V~S~~CTGCGTCEK~CVLs~AAI  194 (213)
T TIGR00397       122 MGVAVLV----GHETCLNYKGLNCSICVRVCPIRGEAISLKPIEN---ERGLLQIPTVDSAKCTGCGTCEKHCVLSEAAI  194 (213)
T ss_pred             CCEEEEE----CCEEECCCCCCCEEEEEEECCCCCCEECCCHHHH---CCCEEEECCEECCCCCCCCCCCCCEECCCHHH
T ss_conf             7127882----5601003478732377873254366000211210---58777614032577677887433103000243


Q ss_pred             EC
Q ss_conf             03
Q gi|254780861|r  119 VE  120 (163)
Q Consensus       119 ~~  120 (163)
T Consensus       195 Rv  196 (213)
T TIGR00397       195 RV  196 (213)
T ss_pred             HH
T ss_conf             00