HHsearch alignment for GI: 254780861 and conserved domain: TIGR00402

>TIGR00402 napF ferredoxin-type protein NapF; InterPro: IPR004496 Members of this family are the ferredoxin-type protein subunits of nitrate reductase. These NapF proteins are involved in electron transfer, and contain iron-sulphur centres similar to those of bacterial-type 4FE-4S ferredoxins.; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0006118 electron transport.
Probab=97.63  E-value=4.6e-05  Score=50.84  Aligned_cols=31  Identities=23%  Similarity=0.405  Sum_probs=23.8

Q ss_pred             HCCCEEEEEECCCCCCCEECCCCHHHHHHCCCCC
Q ss_conf             0572378740588742213452232533088321
Q gi|254780861|r   47 FRGEHALRRYPNGEERCIACKLCEAICPAQAITI   80 (163)
Q Consensus        47 fRG~~~l~~~~~~~ekCi~C~~C~~~CP~~aI~i   80 (163)
T Consensus        60 ~~G~p~v~fd-n~--eC~fCgkCa~aCp~~~f~P   90 (161)
T TIGR00402        60 DAGYPEVEFD-NA--ECDFCGKCAEACPESLFYP   90 (161)
T ss_pred             CCCCEEEEEE-CC--CCCCCCHHHHHCCCCCCCC
T ss_conf             7885068875-68--7672212264287555788