HHsearch alignment for GI: 254780861 and conserved domain: TIGR00402
>TIGR00402 napF ferredoxin-type protein NapF; InterPro: IPR004496 Members of this family are the ferredoxin-type protein subunits of nitrate reductase. These NapF proteins are involved in electron transfer, and contain iron-sulphur centres similar to those of bacterial-type 4FE-4S ferredoxins.; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0006118 electron transport.
Probab=97.63 E-value=4.6e-05 Score=50.84 Aligned_cols=31 Identities=23% Similarity=0.405 Sum_probs=23.8
Q ss_pred HCCCEEEEEECCCCCCCEECCCCHHHHHHCCCCC
Q ss_conf 0572378740588742213452232533088321
Q gi|254780861|r 47 FRGEHALRRYPNGEERCIACKLCEAICPAQAITI 80 (163)
Q Consensus 47 fRG~~~l~~~~~~~ekCi~C~~C~~~CP~~aI~i 80 (163)
T Consensus 60 ~~G~p~v~fd-n~--eC~fCgkCa~aCp~~~f~P 90 (161)
T TIGR00402 60 DAGYPEVEFD-NA--ECDFCGKCAEACPESLFYP 90 (161)
T ss_pred CCCCEEEEEE-CC--CCCCCCHHHHHCCCCCCCC
T ss_conf 7885068875-68--7672212264287555788