HHsearch alignment for GI: 254780861 and conserved domain: TIGR00403
>TIGR00403 ndhI NADH-plastoquinone oxidoreductase, I subunit; InterPro: IPR004497 NADH-plastoquinone oxidoreductase subunit I (1.6.5.3 from EC) catalyses the conversion of plastoquinone and NADH to plastoquinol and NAD(+). The enzyme binds two 4FE-4S clusters at iron-sulphur centres which are similar to those of the bacterial-type 4FE-4S ferredoxins.; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0006118 electron transport.
Probab=90.03 E-value=0.076 Score=31.13 Aligned_cols=18 Identities=39% Similarity=1.191 Sum_probs=10.9
Q ss_pred EHHHCCCCCCCHHHCCCC
Q ss_conf 055558688723337831
Q gi|254780861|r 99 DMIKCIYCGLCQEACPVD 116 (163)
Q Consensus 99 d~~~Ci~Cg~Cv~vCP~~ 116 (163)
T Consensus 61 efdkCiaCevCvrvCPi~ 78 (187)
T TIGR00403 61 EFDKCIACEVCVRVCPIN 78 (187)
T ss_pred EECCEEEEEEEEEEECCC
T ss_conf 313334423456762143