HHsearch alignment for GI: 254780861 and conserved domain: TIGR02512
>TIGR02512 Fe_only_hydrog hydrogenases, Fe-only; InterPro: IPR013352 This model describes iron-only hydrogenases of anaerobic and microaerophilic bacteria and protozoa. These proteins represent a subdivision within a larger family which includes proteins such as nuclear prelamin A recognition factor in animals. These proteins show some heterogeneity in terms of periplasmic, cytosolic or hydrogenosomic location, NAD or NADP dependence, and overall protein length.; GO: 0005506 iron ion binding, 0008901 ferredoxin hydrogenase activity, 0009055 electron carrier activity, 0051536 iron-sulfur cluster binding, 0006118 electron transport.
Probab=97.16 E-value=0.00015 Score=47.62 Aligned_cols=65 Identities=31% Similarity=0.592 Sum_probs=43.8
Q ss_pred CCCCCEECCCCHHHHHHCCCCCCCCCCCCCCC-E--EEEEEEEEHHHCCCCCCCHHHCCCCEEECCCC
Q ss_conf 87422134522325330883210122454473-3--57788850555586887233378310303677
Q gi|254780861|r 59 GEERCIACKLCEAICPAQAITIESGPRCHDGT-R--RTVRYDIDMIKCIYCGLCQEACPVDAIVEGPN 123 (163)
Q Consensus 59 ~~ekCi~C~~C~~~CP~~aI~i~~~~~~~~~~-~--~~~~~~id~~~Ci~Cg~Cv~vCP~~AI~~~~~ 123 (163)
T Consensus 5 ~~~kc~~c~~c~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~cgqc~~~c~~~~~~~~~~ 72 (380)
T TIGR02512 5 DMSKCILCGRCVRACTNVQIVGALGFLNRGGKTEVAPAFGRLLDESECISCGQCSLVCPVGAITEKDD 72 (380)
T ss_pred CCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 43100011101211000010000000123332101211011011111123442101244210000001