HHsearch alignment for GI: 254780861 and conserved domain: TIGR02910
>TIGR02910 sulfite_red_A sulfite reductase, subunit A; InterPro: IPR014259 This entry represents subunit A, one of the three subunits of the anaerobic sulphite reductase of Salmonella, and close homologues from various Clostridium species, where the three-gene neighbourhood is preserved. Two such gene clusters are found in Clostridium perfringens, but it may be that these sets of genes correspond to the distinct assimilatory and dissimilatory forms seen in Clostridium pasteurianum. Note that any one of these enzymes may have secondary substrates such as NH2OH, SeO3(2-), and SO3(2-). Heterologous expression of the anaerobic sulphite reductase of Salmonella confers on Escherichia coli the ability to produce hydrogen sulphide gas from sulphite..
Probab=97.81 E-value=5.2e-06 Score=56.64 Aligned_cols=106 Identities=24% Similarity=0.490 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHH------HHCCCCCCCCCCCCCCCCCCHHCCCEEEE---EECCCCCCCEECCCCHHHHHH-CCCCCCCC
Q ss_conf 999999999999------84069852257875775680005723787---405887422134522325330-88321012
Q gi|254780861|r 14 KEFVGAFFLCLR------YFFKAKTTINYPFEKGSTSPRFRGEHALR---RYPNGEERCIACKLCEAICPA-QAITIESG 83 (163)
Q Consensus 14 ~~~~~gl~~t~k------~~~~~~~T~~YP~e~~~~~~rfRG~~~l~---~~~~~~ekCi~C~~C~~~CP~-~aI~i~~~ 83 (163)
T Consensus 176 ~~~~~~~~~eee~~~~P~fv~EN~~~V~~p~svcrdPqki~~a~i~~~~~W~eY~-sRCI~CGRCn~vCPTCtCf~mqDv 254 (346)
T TIGR02910 176 EEAFKEVELEEELEVEPSFVSENKVKVKIPDSVCRDPQKIRDAKIFKSDLWDEYD-SRCIACGRCNTVCPTCTCFSMQDV 254 (346)
T ss_pred HHHHHCCCCCEECCCCCCEECCCEEEEECCHHHCCCCCCCCCEEEECCCCHHHHH-HCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 9997206721000014642202402743170211673334410121120202120-034457776888876333303545
Q ss_pred ---CCCCCCCEEEE---------------------------------------EEEEEHHHCCCCCCCHHHCCCCEEECC
Q ss_conf ---24544733577---------------------------------------888505555868872333783103036
Q gi|254780861|r 84 ---PRCHDGTRRTV---------------------------------------RYDIDMIKCIYCGLCQEACPVDAIVEG 121 (163)
Q Consensus 84 ---~~~~~~~~~~~---------------------------------------~~~id~~~Ci~Cg~Cv~vCP~~AI~~~ 121 (163)
T Consensus 255 fY~dN~~~GERRRvWASC~vdGFt~mAGGh~FR~~~G~RmRfkvmHKv~DYkkR~Gye-HMCVGCGRCDD~CpeY-IsFS 332 (346)
T TIGR02910 255 FYKDNKKAGERRRVWASCMVDGFTNMAGGHGFREKKGQRMRFKVMHKVNDYKKRNGYE-HMCVGCGRCDDICPEY-ISFS 332 (346)
T ss_pred EEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCC-CEEECCCCCCCCCCCH-HHHH
T ss_conf 5503678887232211530588655557765325788611234310211000016863-0032477746667203-4565
Q ss_pred C
Q ss_conf 7
Q gi|254780861|r 122 P 122 (163)
Q Consensus 122 ~ 122 (163)
T Consensus 333 n 333 (346)
T TIGR02910 333 N 333 (346)
T ss_pred H
T ss_conf 5