HHsearch alignment for GI: 254780861 and conserved domain: TIGR02936

>TIGR02936 fdxN_nitrog ferredoxin III, nif-specific; InterPro: IPR014283 This entry consists of ferredoxins which are encoded in the nitrogen fixation regions of many nitrogen-fixing bacteria. The charcterised protein from Rhodobacter capsulatus (Rhodopseudomonas capsulata) is homodimeric and contains two [4Fe-4S] clusters bound per monomer. Although nif-specific, these prtoeins are not universal in nitrogen-fixers as other nitrogenase systems may substitute flavodoxins, or different types of ferredoxin. .
Probab=96.65  E-value=0.00051  Score=44.44  Aligned_cols=26  Identities=38%  Similarity=0.722  Sum_probs=19.6

Q ss_pred             EEEHHHCCCCCCCHHHCCCCEEECCC
Q ss_conf             85055558688723337831030367
Q gi|254780861|r   97 DIDMIKCIYCGLCQEACPVDAIVEGP  122 (163)
Q Consensus        97 ~id~~~Ci~Cg~Cv~vCP~~AI~~~~  122 (163)
T Consensus        17 ~ID~~kCIGCGRCfKVCgr~Vl~L~G   42 (96)
T TIGR02936        17 SIDQEKCIGCGRCFKVCGRDVLTLKG   42 (96)
T ss_pred             HCCHHCCCCCCCCCCCCCCCCCEEEE
T ss_conf             11431075454631417867642221