HHsearch alignment for GI: 254780861 and conserved domain: TIGR03149
>TIGR03149 cyt_nit_nrfC cytochrome c nitrite reductase, Fe-S protein. Members of this protein family are the Fe-S protein, NrfC, of a cytochrome c nitrite reductase system for which the pentaheme cytochrome c protein, NrfB (family TIGR03146) is an unambiguous marker. Members of this protein family show similarity to other ferredoxin-like proteins, including a subunit of a polysulfide reductase.
Probab=98.66 E-value=1.1e-08 Score=73.04 Aligned_cols=28 Identities=29% Similarity=0.579 Sum_probs=17.0
Q ss_pred EEEHHHCCCCCCCHHHCCCCEEECCCCC
Q ss_conf 8505555868872333783103036773
Q gi|254780861|r 97 DIDMIKCIYCGLCQEACPVDAIVEGPNF 124 (163)
Q Consensus 97 ~id~~~Ci~Cg~Cv~vCP~~AI~~~~~~ 124 (163)
T Consensus 121 ~vd~~~CiGC~~C~~aCPy~a~~~~~~~ 148 (225)
T TIGR03149 121 DVHKDLCVGCQYCIAACPYRVRFIHPVT 148 (225)
T ss_pred EEEHHHCCCHHHHHHCCCCCCCEECCCC
T ss_conf 9756869404189861999983548888