RPSBLAST alignment for GI: 254780861 and conserved domain: TIGR01944

>gnl|CDD|162616 TIGR01944, rnfB, electron transport complex, RnfABCDGE type, B subunit. The six subunit complex RnfABCDGE in Rhodobacter capsulatus encodes an apparent NADH oxidoreductase responsible for electron transport to nitrogenase, necessary for nitrogen fixation. A closely related complex in E. coli, RsxABCDGE (Reducer of SoxR), reduces the 2Fe-2S-containing superoxide sensor SoxR, active as a transcription factor when oxidized. This family of putative NADH oxidoreductase complexes exists in many of the same species as the related NQR, a Na(+)-translocating NADH-quinone reductase, but is distinct. This model describes the B subunit. Length = 165
 Score = 41.7 bits (98), Expect = 9e-05
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 10/60 (16%)

Query: 60  EERCIACKLCEAICPAQAITIESGPRCHDGTRRTVRYDIDMIKCIYCGLCQEACPVDAIV 119
           E+ CI C  C   CP  AI          G  + +   I   +C  C LC E CP D I 
Sbjct: 112 EDNCIGCTKCIQACPVDAIV---------GAAKAMHTVI-ADECTGCDLCVEPCPTDCIE 161