HHsearch alignment for GI: 254780862 and conserved domain: TIGR00940

>TIGR00940 2a6301s01 monovalent cation:proton antiporter; InterPro: IPR005663 This family of proteins consists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterised systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter.; GO: 0015077 monovalent inorganic cation transmembrane transporter activity, 0030004 cellular monovalent inorganic cation homeostasis.
Probab=97.26  E-value=0.01  Score=33.25  Aligned_cols=168  Identities=20%  Similarity=0.282  Sum_probs=95.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf             9999999999999999999724--28999999999999999999980870799999999999999999999998173111
Q gi|254780862|r    5 SLFFYLFSFMAIISSFLVVTVR--NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIE   82 (199)
Q Consensus         5 ~i~F~~~a~l~i~sal~vi~~k--n~v~s~l~Li~~f~~vAgl~~lL~aeFla~~qIlVYvGAI~VLflFvIMll~~~~~   82 (199)
T Consensus       629 ~p~~~~l~~~~i~~a~~i~f~~kfhRl~sii~lg~~G~~~~~~Fv~f~APDLAlTQllVE~vt-tvLflL~fyhLP~l~~  707 (809)
T TIGR00940       629 DPYFVVLVLILIAAALAIAFAKKFHRLASIILLGAVGYVVAILFVFFKAPDLALTQLLVEIVT-TVLFLLAFYHLPKLRK  707 (809)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHCCCCCC
T ss_conf             499999999999999999988877899999999999999999999971641789999999999-9999998751752002


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHCCCCCCCC-CCCCCCHHHHHH--H----HHHHH-HHHHHHHHHHH
Q ss_conf             21233221001246899999999--999997766215666554-344611389999--9----99875-26999999999
Q gi|254780862|r   83 VAEPRKKRGFLGSFFIGILAAEL--IVCASNFMVFSAEGELSR-LVFKGNNVENIG--K----VLYTQ-YAYPLEISGFI  152 (199)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iG--~----~L~t~-y~~~fel~svi  152 (199)
T Consensus       708 e~~~~~f~--l~n~~I~~GVG~~V~~I~L~~y~~Gt-e~~l~~IS~yy~E~~~~LA~G~NMVNVILVDFRGlDTLlE~~V  784 (809)
T TIGR00940       708 EKVAAKFS--LSNSLIAIGVGLLVILIALIAYALGT-EAGLESISKYYIENVKDLAGGKNMVNVILVDFRGLDTLLEVLV  784 (809)
T ss_pred             CCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHH
T ss_conf             45420133--44436762257999999999752100-0124577888876446641784258888850442579999999


Q ss_pred             HHHHHHHHHHHH-HHCCCCCCCCCH
Q ss_conf             999999999999-750588754689
Q gi|254780862|r  153 LLLSMIGAIVLM-LRHRRDIKRQDI  176 (199)
Q Consensus       153 LLvamiGAi~La-~~~~~~~krq~~  176 (199)
T Consensus       785 LGIA~L~V~~MIKLRkkr~T~~~~V  809 (809)
T TIGR00940       785 LGIAALAVIAMIKLRKKRQTQREDV  809 (809)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             9999999999999765305677789