BLAST/PSIBLAST alignment of GI: 254780862 and GI: 15888608 at iteration 1
>gi|15888608|ref|NP_354289.1| NADH dehydrogenase subunit J [Agrobacterium tumefaciens str. C58] Length = 204
>gi|15156330|gb|AAK87074.1| NADH ubiquinone oxidoreductase chain J [Agrobacterium tumefaciens str. C58] Length = 204
 Score =  181 bits (458), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 100/206 (48%), Positives = 135/206 (65%), Gaps = 9/206 (4%)

Query: 1   MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
           M + ++FFY+F+F+A+ S+F+V+  +NP++SV  LI  F NAA LFLL GAEF+AMI LV
Sbjct: 1   MGLHAVFFYIFAFVAVASAFMVIASKNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLV 60

Query: 61  VYVGAVIVFFLFIIMMLDIDIEVAEPRK---KRGFLGSFFIGILAAELIVCASNFMVFSA 117
           VYVGAV V FLF++MMLD+D   AE R    +   +G+    ILAAELIV     M+   
Sbjct: 61  VYVGAVAVLFLFVVMMLDVDF--AELRSGVLQYAPIGALIGVILAAELIVVVGGSMLNPI 118

Query: 118 EGELSRLVFKG----NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
             +   +         N   +G VLYT Y Y  +++G +LL++MIGAIVL LRHR DIKR
Sbjct: 119 AAKSITMPIPPAAERTNTAALGDVLYTNYVYFFQLAGLVLLVAMIGAIVLTLRHRTDIKR 178

Query: 174 QDISKQLESNPDNSIVMVKVKSGKGI 199
           QDIS Q+  +P  ++  VKVK G+GI
Sbjct: 179 QDISTQVGRDPKTAVTTVKVKPGQGI 204