BLAST/PSIBLAST alignment of GI: 254780862 and GI: 209548873 at iteration 1
>gi|209548873|ref|YP_002280790.1| NADH dehydrogenase subunit J [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 204
>gi|209534629|gb|ACI54564.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 204
 Score =  181 bits (458), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/207 (49%), Positives = 139/207 (67%), Gaps = 11/207 (5%)

Query: 1   MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
           M +Q+LFFYLF+F+A+ S+F+V+  +NP++SV  LI  F NAAGLFLLLGAEF+AMI LV
Sbjct: 1   MGLQALFFYLFAFVAVASAFMVIWAKNPVHSVLFLILVFFNAAGLFLLLGAEFLAMILLV 60

Query: 61  VYVGAVIVFFLFIIMMLDID-IEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
           VYVGAV V FLF++MMLDID  E+     +   +G     ILAAELIV     ++     
Sbjct: 61  VYVGAVAVLFLFVVMMLDIDFTELRAGVLEYAPIGGLIGIILAAELIVVIGGSVI---SP 117

Query: 120 ELSRLVF-------KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
           E+++ V        +  N   +G VLYT Y Y  EI+G +LL++MIGAIVL LRHR +IK
Sbjct: 118 EIAKSVAMPIPALSERTNTAALGDVLYTNYVYFFEIAGLVLLVAMIGAIVLTLRHRTNIK 177

Query: 173 RQDISKQLESNPDNSIVMVKVKSGKGI 199
           RQ+I +Q+   P  ++ +V VK G+G+
Sbjct: 178 RQNIPRQVARTPATAVEVVSVKPGQGV 204