BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780862|ref|YP_003065275.1| NADH dehydrogenase subunit J
[Candidatus Liberibacter asiaticus str. psy62]
(199 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780862|ref|YP_003065275.1| NADH dehydrogenase subunit J [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040539|gb|ACT57335.1| NADH dehydrogenase subunit J [Candidatus Liberibacter asiaticus
str. psy62]
Length = 199
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 199/199 (100%), Positives = 199/199 (100%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV
Sbjct: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE
Sbjct: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL
Sbjct: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
Query: 181 ESNPDNSIVMVKVKSGKGI 199
ESNPDNSIVMVKVKSGKGI
Sbjct: 181 ESNPDNSIVMVKVKSGKGI 199
>gi|327188497|gb|EGE55711.1| NADH dehydrogenase subunit J [Rhizobium etli CNPAF512]
Length = 251
Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 96/204 (47%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFYLF+F+A+ S+F+V+ +NP++SV LI F NAAGLFLLLGAEF+AMI LV
Sbjct: 48 MGLQALFFYLFAFVAVASAFMVIWAKNPVHSVLFLILVFFNAAGLFLLLGAEFLAMILLV 107
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IGI+ A ++ V S E
Sbjct: 108 VYVGAVAVLFLFVVMMLDIDFTELRAGVLEYAPIGGLIGIILAAELIVVIGGSVISPEIA 167
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + + N +G VLYT Y Y +I+G +LL++MIGAIVL LRHR +IKRQ+
Sbjct: 168 KTVAMPIPALTERTNTAALGDVLYTNYVYFFQIAGLVLLVAMIGAIVLTLRHRTNIKRQN 227
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I +Q+ P ++ +V VK G+G+
Sbjct: 228 IPRQVARTPATAVEVVSVKPGQGV 251
>gi|218462498|ref|ZP_03502589.1| NADH dehydrogenase subunit J [Rhizobium etli Kim 5]
Length = 230
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 97/204 (47%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFYLF+F+A+ S+F+V+ +NP++SV LI F NAAGLFLLLGAEF+AMI LV
Sbjct: 27 MGLQALFFYLFAFVAVASAFMVIWAKNPVHSVLFLILVFFNAAGLFLLLGAEFLAMILLV 86
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IGI+ A ++ V S E
Sbjct: 87 VYVGAVAVLFLFVVMMLDIDFTELRAGVLEYAPIGGLIGIILAAELIVVIGGSVISPEIA 146
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
S + + N +G VLYT Y Y +I+G +LL++MIGAIVL LRHR +IKRQ+
Sbjct: 147 KSVAMPIPALTERTNTAALGDVLYTNYVYFFQIAGLVLLVAMIGAIVLTLRHRTNIKRQN 206
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I +Q+ P ++ +V VK G+G+
Sbjct: 207 IPRQVARTPATAVEVVTVKPGQGV 230
>gi|291613547|ref|YP_003523704.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sideroxydans
lithotrophicus ES-1]
gi|291583659|gb|ADE11317.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sideroxydans
lithotrophicus ES-1]
Length = 215
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 124/195 (63%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++++ FY F+ + ++++ V+T RNP+++V L+ AFV++AG++LLL AEF+A++ ++
Sbjct: 1 MNLETVLFYFFAIVTVLAALRVITARNPLHAVLFLVLAFVSSAGIWLLLEAEFLAIVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+IE R + L +V SA
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIERLREGFWRWLPVGLLLAALIGVQMVWVLGAKETSAGMR 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + +N + +G+++YT Y YP E++ +LL++M+ AI L LR RRD KRQDI++Q+
Sbjct: 121 VVKHAADYSNTKELGRLVYTDYVYPFELAAILLLVAMVAAIALTLRRRRDAKRQDINQQV 180
Query: 181 ESNPDNSIVMVKVKS 195
+ + + +V V S
Sbjct: 181 KVKKQDRLRIVSVPS 195
>gi|114327957|ref|YP_745114.1| NADH-quinone oxidoreductase chain J [Granulibacter bethesdensis
CGDNIH1]
gi|114316131|gb|ABI62191.1| NADH-quinone oxidoreductase chain J [Granulibacter bethesdensis
CGDNIH1]
Length = 247
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ ++ FY+FS + I+S +VV+ RNP+++V LI AF NAAGLFLL GAEF+AMI ++V
Sbjct: 1 MIAAIAFYVFSAILIVSGAMVVSARNPVHAVLFLILAFFNAAGLFLLTGAEFLAMILVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPR-KKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
YVGAV V FLF++MML+I+ ++ +G+ G+L EL + + V
Sbjct: 61 YVGAVAVLFLFVVMMLNINFAEVRDGWQRYAPVGAAIGGVLLVELAMVLGGWQVAPGASA 120
Query: 121 --LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
S N +G+++YT Y +++G ILL++MIGAIVL LR R+ + Q+I++
Sbjct: 121 LRFSPRPDHVQNTVALGQIVYTHYVMLFQMAGLILLVAMIGAIVLTLRDRKTSRHQNIAE 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ ++++ +V G+GI
Sbjct: 181 QVNRRIEDTLQLVNAPVGQGI 201
>gi|194289168|ref|YP_002005075.1| NADH dehydrogenase subunit j [Cupriavidus taiwanensis LMG 19424]
gi|193223003|emb|CAQ69008.1| NADH:ubiquinone oxidoreductase complex I, chain J [Cupriavidus
taiwanensis LMG 19424]
Length = 240
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 65/199 (32%), Positives = 116/199 (58%), Gaps = 3/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY+F+ + ++S+ V+T +NP+++ L+ +F AA +++LL AEF+A++ ++
Sbjct: 27 MELTTTIFYVFALVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLQAEFLAILLVL 86
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MM+DIDIE + +G L +
Sbjct: 87 VYVGAVMVLFLFVVMMIDIDIEHLRRDFWTYVPMASIVGALIIAEMAIVLVRNFVGTTTP 146
Query: 121 LSRLVFKG---NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
++ + +N +GK++YT Y Y E++G ILL+++I A+ L LR R+D+K QD+S
Sbjct: 147 VAPAGSQEPGYSNTAALGKLIYTDYIYAFEVAGIILLVAIIAAVALTLRRRKDVKAQDVS 206
Query: 178 KQLESNPDNSIVMVKVKSG 196
QL + D + +V + +
Sbjct: 207 AQLRTRRDERVRLVPMAAE 225
>gi|254294093|ref|YP_003060116.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Hirschia
baltica ATCC 49814]
gi|254042624|gb|ACT59419.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Hirschia
baltica ATCC 49814]
Length = 204
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 113/197 (57%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
MQ + FY+ S + +IS+ V+ RNP++SV LI +F AAGL +L+GAEF+AM+ +VVY
Sbjct: 1 MQLIAFYILSTVVLISAISVIASRNPVHSVLWLILSFFTAAGLLVLIGAEFLAMLLIVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLD+D F+ + + I +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAEMRKGFADYFVVGGLVALALLAEIGVVAASANSVEGRNFD 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
N E + VLYT Y +++G +LL++MIGAIVL LRHR D+KRQ + +Q
Sbjct: 121 PSPGADTNAEALSNVLYTDYLLLFQMAGIVLLVAMIGAIVLTLRHRPDVKRQKVEEQTAR 180
Query: 183 NPDNSIVMVKVKSGKGI 199
+ ++ ++KV G+GI
Sbjct: 181 RREEAVELIKVNPGQGI 197
>gi|312116311|ref|YP_004013907.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Rhodomicrobium vannielii ATCC 17100]
gi|311221440|gb|ADP72808.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Rhodomicrobium vannielii ATCC 17100]
Length = 200
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 89/199 (44%), Positives = 128/199 (64%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FFYLFS + I S +V++ RNP++SV LI AF+NAAGLF+LLGAEF+AMI ++
Sbjct: 1 MTIAGYFFYLFSIVLISSGAMVISARNPVHSVLFLILAFLNAAGLFVLLGAEFLAMILVI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++M LDID R +G++ ++ +
Sbjct: 61 VYVGAVAVLFLFVVMTLDIDFGQLRKGMSRYLPIGILVGLVLVTELILVVGGFTMAPGAI 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ +N E IG+VLYT Y Y ++SG +LL++MIGAIVL LRHR D KRQ++++Q+
Sbjct: 121 RPVASAQVSNTEAIGRVLYTDYLYFFQLSGLVLLVAMIGAIVLTLRHRPDSKRQNVARQV 180
Query: 181 ESNPDNSIVMVKVKSGKGI 199
+++I +VKV++GKGI
Sbjct: 181 GRKREDAIEVVKVETGKGI 199
>gi|296116525|ref|ZP_06835135.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Gluconacetobacter hansenii ATCC 23769]
gi|295976737|gb|EFG83505.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Gluconacetobacter hansenii ATCC 23769]
Length = 257
Score = 154 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + FY+F+ + ++S+ +VV+ RNP++SV LI AF NAAGLFL+ GAEF+AMI ++V
Sbjct: 1 MMTQIVFYIFAAVLVLSASMVVSARNPVHSVLFLILAFFNAAGLFLIAGAEFLAMILVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPR-KKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
YVGAV V FLF++MMLDI I A ++ G+ +L EL++ ++ V S G+
Sbjct: 61 YVGAVAVLFLFVVMMLDIRIAQAREGLQRYAPFGAAIGAVLLGELVLAFMHWRVASNIGD 120
Query: 121 LSRLVFKG---NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
++ LV +N IG VLYT Y + + +LL++MIGAIVL LR R +RQDI
Sbjct: 121 VAHLVPSTPTRSNTAAIGDVLYTHYIFLFQACALVLLVAMIGAIVLTLRDRPTGRRQDIE 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
+Q E +P S+ M+ + G+ +
Sbjct: 181 RQHERDPAESMEMLSLPLGRSV 202
>gi|91776404|ref|YP_546160.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Methylobacillus flagellatus KT]
gi|91710391|gb|ABE50319.1| NADH dehydrogenase subunit J [Methylobacillus flagellatus KT]
Length = 212
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ Q FY + + + + V+T RNP+++ L+ AF AAG++LLL AEF+A+ ++
Sbjct: 1 MIFQDYVFYALAAILLFAGVRVITTRNPVHATLFLVLAFFTAAGIWLLLEAEFLAIALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+++ + +G+L A +V FS +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDKMREGFWNALPVALPVGLLMAGEMVMILGSKHFSPDML 120
Query: 121 LSRL--VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ +N IG+ LYT Y P E++ +LL++++ AI L LR R+D K D ++
Sbjct: 121 STPAPRPAGYSNTAEIGRQLYTDYLLPFELASVVLLVAIVAAIALTLRERKDSKFMDPAE 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q++ + + +V + + K
Sbjct: 181 QVKVKRADRVRIVSMPAEK 199
>gi|162148802|ref|YP_001603263.1| NADH-quinone oxidoreductase subunit J [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545450|ref|YP_002277679.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Gluconacetobacter diazotrophicus PAl 5]
gi|161787379|emb|CAP56974.1| putative NADH-quinone oxidoreductase chain J [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533127|gb|ACI53064.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Gluconacetobacter diazotrophicus PAl 5]
Length = 253
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 85/201 (42%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + FY+F+ + ++S+ +VV+ RNP++SV LI AF NAAGLFL+ GAEF+AMI ++V
Sbjct: 1 MMAQIVFYVFATVLVLSAGMVVSARNPVHSVLFLILAFFNAAGLFLVAGAEFLAMILVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDI-EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
YVGAV V FLF++MMLD+ E+ E ++ G+ +L AEL + ++ V +
Sbjct: 61 YVGAVAVLFLFVVMMLDVRFTEMREGLQRYAPFGAAVGAVLFAELALAFGHWQVARNIAD 120
Query: 121 LSRLVFKGN--NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+S LV N +G VLYT Y + E G +LL++MIGAIVL LR R +RQ+I +
Sbjct: 121 VSHLVPTPGRTNTAALGDVLYTHYIFLFESCGLVLLVAMIGAIVLTLRERPVGRRQNIER 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q E +S+ M+ + G+G+
Sbjct: 181 QHERTAADSLDMMALPLGQGV 201
>gi|329114687|ref|ZP_08243446.1| NADH-quinone oxidoreductase subunit J [Acetobacter pomorum DM001]
gi|326696167|gb|EGE47849.1| NADH-quinone oxidoreductase subunit J [Acetobacter pomorum DM001]
Length = 243
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 83/200 (41%), Positives = 124/200 (62%), Gaps = 2/200 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M L FY+F+ + + S+ +V++ RNP++SV LI AF NAAGLFL+ GAEF+AM+ ++V
Sbjct: 7 MMAQLVFYVFATVLLFSAVMVISARNPVHSVLFLILAFFNAAGLFLVAGAEFLAMLLVIV 66
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRK-KRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
YVGAV V FLF++MMLDID K LG G+L AEL++ SN+ + A
Sbjct: 67 YVGAVAVLFLFVVMMLDIDFSSLREGFQKHAPLGVCVGGVLFAELLMAFSNWKMAPANIV 126
Query: 121 LS-RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ N E +G V+YT Y + + G +LL++MIGAIVL LR R +RQ+I KQ
Sbjct: 127 APLNPAPQLTNTEALGTVIYTHYVFLFQACGLVLLVAMIGAIVLTLRERATGRRQNIDKQ 186
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ ++ +V++ G+ +
Sbjct: 187 HARTVEETLELVQLPLGENV 206
>gi|78067037|ref|YP_369806.1| NADH dehydrogenase subunit J [Burkholderia sp. 383]
gi|77967782|gb|ABB09162.1| NADH dehydrogenase subunit J [Burkholderia sp. 383]
Length = 216
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ KR + +G + +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDYLRRDFKRFVPMATVVGAIIVIETALILWRGYGDTQTV 120
Query: 121 LSRLV---FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N IGKV+YT Y + EI+G +LL+++I AI L R +D KRQ +S
Sbjct: 121 HAMATGEMANWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTERKGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
Q++ ++ + +VK+++ K
Sbjct: 181 DQVKVRRNDRVRLVKMEAEK 200
>gi|107023179|ref|YP_621506.1| NADH dehydrogenase subunit J [Burkholderia cenocepacia AU 1054]
gi|116690261|ref|YP_835884.1| NADH dehydrogenase subunit J [Burkholderia cenocepacia HI2424]
gi|170733600|ref|YP_001765547.1| NADH dehydrogenase subunit J [Burkholderia cenocepacia MC0-3]
gi|105893368|gb|ABF76533.1| NADH dehydrogenase subunit J [Burkholderia cenocepacia AU 1054]
gi|116648350|gb|ABK08991.1| NADH dehydrogenase subunit J [Burkholderia cenocepacia HI2424]
gi|169816842|gb|ACA91425.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
cenocepacia MC0-3]
Length = 216
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDYLRRDFKRFVPMATVVGAIIVIETALILWRGYGDTHTV 120
Query: 121 LSRLV---FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N IGKV+YT Y + EI+G +LL+++I AI L R +D KRQ +S
Sbjct: 121 HAMATGEMANWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTERKGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
Q++ ++ + +VK+++ K
Sbjct: 181 DQVKVRRNDRVRLVKMEADK 200
>gi|253998392|ref|YP_003050455.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylovorus
sp. SIP3-4]
gi|313200469|ref|YP_004039127.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylovorus
sp. MP688]
gi|253985071|gb|ACT49928.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylovorus
sp. SIP3-4]
gi|312439785|gb|ADQ83891.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylovorus
sp. MP688]
Length = 213
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/197 (32%), Positives = 109/197 (55%), Gaps = 2/197 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M FY+ + + + + V+T RNP+++ L+ AF AAG++LLL AEF+A+ ++
Sbjct: 1 MNFNDYVFYVLAAILLFAGLRVITSRNPVHAALHLVLAFFTAAGIWLLLEAEFLAIALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE-- 118
VYVGAV+V FLF++MMLDI+++ + +GIL +V F +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDKLREGFWEALPIALPVGILMTLEMVMILGSKHFGVDRV 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ +N +G+ LYT Y P E++ +LL++++ AI L LR R+D K D ++
Sbjct: 121 AAPTPHPAGYSNTAELGRQLYTDYLLPFELASVVLLVAIVAAIALTLRDRKDSKFIDPAE 180
Query: 179 QLESNPDNSIVMVKVKS 195
Q++ + I MV + +
Sbjct: 181 QVKVKRADRIRMVSMPA 197
>gi|150396122|ref|YP_001326589.1| NADH dehydrogenase subunit J [Sinorhizobium medicae WSM419]
gi|150027637|gb|ABR59754.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
medicae WSM419]
Length = 222
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 96/204 (47%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFYLF+F+A+ S+F+V+ +NP+YSV LI F NAAGLFLL GAEF+AMI LV
Sbjct: 19 MGLQALFFYLFAFIAVASAFMVIAAKNPVYSVLFLILTFFNAAGLFLLTGAEFLAMILLV 78
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IG++ A ++ + FS E
Sbjct: 79 VYVGAVAVLFLFVVMMLDIDFAELRAGVLEYAPIGALIGMILAAELIVVAGGWAFSPEIA 138
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ N +G VLYT Y Y +I+G +LL++MIGAIVL LRHR++IKRQ
Sbjct: 139 KGIAMPIPAPSERTNTAALGDVLYTHYVYFFQIAGLVLLVAMIGAIVLTLRHRQNIKRQS 198
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I +Q+ P+ ++ +V VK G+GI
Sbjct: 199 IPQQVARTPETAVEVVTVKPGQGI 222
>gi|115352329|ref|YP_774168.1| NADH dehydrogenase subunit J [Burkholderia ambifaria AMMD]
gi|170698118|ref|ZP_02889198.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
ambifaria IOP40-10]
gi|171316312|ref|ZP_02905533.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
ambifaria MEX-5]
gi|115282317|gb|ABI87834.1| NADH dehydrogenase subunit J [Burkholderia ambifaria AMMD]
gi|170136976|gb|EDT05224.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
ambifaria IOP40-10]
gi|171098538|gb|EDT43339.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
ambifaria MEX-5]
Length = 216
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDYLRRDFKRFVPMATVVGAIIVVETALILWRGYGDTHTV 120
Query: 121 LS---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + +N IGKV+YT Y + EI+G +LL+++I AI L R +D KRQ +S
Sbjct: 121 HAMATGAMADWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTERKGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
Q++ ++ + +VK+++ K
Sbjct: 181 DQVKVRRNDRVRLVKMEAEK 200
>gi|172061200|ref|YP_001808852.1| NADH dehydrogenase subunit J [Burkholderia ambifaria MC40-6]
gi|171993717|gb|ACB64636.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
ambifaria MC40-6]
Length = 216
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDYLRRDFKRFVPMATVVGAIIVVETALILWRGYGDTHAV 120
Query: 121 LS---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + +N IGKV+YT Y + EI+G +LL+++I AI L R +D KRQ +S
Sbjct: 121 HAMATGAMADWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTERKGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
Q++ ++ + +VK+++ K
Sbjct: 181 DQVKVRRNDRVRLVKMEAEK 200
>gi|258542713|ref|YP_003188146.1| NADH-quinone oxidoreductase chain J [Acetobacter pasteurianus IFO
3283-01]
gi|256633791|dbj|BAH99766.1| NADH-quinone oxidoreductase chain J [Acetobacter pasteurianus IFO
3283-01]
gi|256636850|dbj|BAI02819.1| NADH-quinone oxidoreductase chain J [Acetobacter pasteurianus IFO
3283-03]
gi|256639903|dbj|BAI05865.1| NADH-quinone oxidoreductase chain J [Acetobacter pasteurianus IFO
3283-07]
gi|256642959|dbj|BAI08914.1| NADH-quinone oxidoreductase chain J [Acetobacter pasteurianus IFO
3283-22]
gi|256646014|dbj|BAI11962.1| NADH-quinone oxidoreductase chain J [Acetobacter pasteurianus IFO
3283-26]
gi|256649067|dbj|BAI15008.1| NADH-quinone oxidoreductase chain J [Acetobacter pasteurianus IFO
3283-32]
gi|256652054|dbj|BAI17988.1| NADH-quinone oxidoreductase chain J [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655111|dbj|BAI21038.1| NADH-quinone oxidoreductase chain J [Acetobacter pasteurianus IFO
3283-12]
Length = 243
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 83/200 (41%), Positives = 125/200 (62%), Gaps = 2/200 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M L FY+F+ + + S+ +V++ RNP++SV LI AF NAAGLFL+ GAEF+AM+ ++V
Sbjct: 7 MMAQLVFYVFATVLLFSAVMVISARNPVHSVLFLILAFFNAAGLFLVAGAEFLAMLLVIV 66
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRK-KRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
YVGAV V FLF++MMLDID K LG G+L AEL++ SN+ + A
Sbjct: 67 YVGAVAVLFLFVVMMLDIDFSSLREGFQKHAPLGVCVGGVLFAELLMAFSNWKMAPANIV 126
Query: 121 LS-RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
V + N E +G V+YT Y + + G +LL++MIGAIVL LR R +RQ+I +Q
Sbjct: 127 APLNPVPQLTNTEALGTVIYTHYVFLFQACGLVLLVAMIGAIVLTLRERATGRRQNIDQQ 186
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ ++ +V++ G+ +
Sbjct: 187 HARTVEETLELVQLPLGENV 206
>gi|206560694|ref|YP_002231459.1| NADH dehydrogenase subunit J [Burkholderia cenocepacia J2315]
gi|198036736|emb|CAR52636.1| NADH dehydrogenase I chain J [Burkholderia cenocepacia J2315]
Length = 216
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDYLRRDFKRFVPMATVVGAIIVIETALILWRGYGDTHTV 120
Query: 121 LSRLV---FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N IGKV+YT Y + EI+G +LL+++I AI L R +D KRQ +S
Sbjct: 121 HAMATGEMANWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTERKGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
Q++ ++ + +VK+++ K
Sbjct: 181 DQVKVRRNDRVRLVKMEADK 200
>gi|325524299|gb|EGD02411.1| NADH:ubiquinone oxidoreductase subunit J [Burkholderia sp. TJI49]
Length = 216
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDFLRRDFKRFVPMATVVGAIIVIETALILWRGYGDTHAA 120
Query: 121 LS---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + +N IGKV+YT Y + EI+G +LL+++I AI L R +D KRQ +S
Sbjct: 121 HAMATGAMADWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTERKGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
Q++ D+ + +VK+++ K
Sbjct: 181 DQVKVRRDDRVRLVKMEAEK 200
>gi|73540673|ref|YP_295193.1| NADH dehydrogenase subunit J [Ralstonia eutropha JMP134]
gi|72118086|gb|AAZ60349.1| NADH dehydrogenase (quinone) [Ralstonia eutropha JMP134]
Length = 240
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 3/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY+F+ + ++S+ V+T +NP++S L+ +F AA ++LLL AEF+A++ ++
Sbjct: 27 MELTTTIFYVFALVLVLSALKVITAKNPVHSALFLVLSFFTAAAIWLLLKAEFLAILLVL 86
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MM+DIDIE + +G L +
Sbjct: 87 VYVGAVMVLFLFVVMMIDIDIEHLRRDFWTYVPLASVVGALIIAEMAIVLVRNFIGTTAP 146
Query: 121 LSRL---VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N +GK++Y Y Y E++G ILL+++I A+ L LR R+D+K QDI
Sbjct: 147 VLPAGSQDPGYSNTAALGKLIYNDYIYAFEVAGIILLVAIIAAVALTLRRRKDVKGQDIP 206
Query: 178 KQLESNPDNSIVMVKVKSG 196
QL + D+ + +V + +
Sbjct: 207 SQLRTRRDDRVRLVAMPAE 225
>gi|254247666|ref|ZP_04940987.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Burkholderia
cenocepacia PC184]
gi|124872442|gb|EAY64158.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Burkholderia
cenocepacia PC184]
Length = 216
Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 115/200 (57%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVPFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDYLRRDFKRFVPMATVVGAIIVIETALILWRGYGDTHTV 120
Query: 121 LSRLV---FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N IGKV+YT Y + EI+G +LL+++I AI L R +D KRQ +S
Sbjct: 121 HAMATGEMANWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTERKGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
Q++ ++ + +VK+++ K
Sbjct: 181 DQVKVRRNDRVRLVKMEADK 200
>gi|254455980|ref|ZP_05069409.1| NADH dehydrogenase i chain j [Candidatus Pelagibacter sp. HTCC7211]
gi|207082982|gb|EDZ60408.1| NADH dehydrogenase i chain j [Candidatus Pelagibacter sp. HTCC7211]
Length = 210
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 74/206 (35%), Positives = 123/206 (59%), Gaps = 7/206 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ ++FFYLFS +AI+S+ +V +N ++SVF LI F++ + LF+++GAEF+ MI L+
Sbjct: 1 MIAHAIFFYLFSLIAIVSAIMVTASKNTVHSVFFLILDFISISCLFIMIGAEFLGMIMLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG- 119
VYVGAV V FLF++MML++ + + G +G++ + LI ++ +
Sbjct: 61 VYVGAVAVLFLFVVMMLNVAQQKNQWFASEESSGHIPVGLIISTLIFFELIIVIGGWKYK 120
Query: 120 ------ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
S + +N +IG++LYT Y + +ISG ILL++M+GAIVL R R +K
Sbjct: 121 PDLFDLNNSMTNYSLSNTHSIGQILYTDYIHIFQISGMILLVAMVGAIVLTFRKREGVKT 180
Query: 174 QDISKQLESNPDNSIVMVKVKSGKGI 199
Q KQ+ + +++V+S KG+
Sbjct: 181 QSYLKQISRERSEGVKIIEVESNKGV 206
>gi|295689615|ref|YP_003593308.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Caulobacter
segnis ATCC 21756]
gi|295431518|gb|ADG10690.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Caulobacter
segnis ATCC 21756]
Length = 205
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 127/203 (62%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q++ FYL +F+ I + LVV+ RNP++SV LI AF +AAGLF+LLGAEF+AM+ +V
Sbjct: 1 MALQAIAFYLLAFVTIAAGLLVVSARNPVHSVLFLITAFFSAAGLFVLLGAEFLAMLLIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS---- 116
VYVGAV V FLF++MMLD+D + +G + ++ + + +
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELRQGFAQYLPIGGLVGGILTLEMIFVAATVATNGAAA 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
G + N E IG+VLYT Y + +++G +LL++MIGAIVL LRH+ +KRQDI
Sbjct: 121 KNGLPNASPGGVPNTEAIGRVLYTDYIFFFQLAGLVLLVAMIGAIVLTLRHKPGVKRQDI 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
KQ+ P + +V++K G+GI
Sbjct: 181 GKQVARTPKTGMTLVQIKPGEGI 203
>gi|71083591|ref|YP_266310.1| NADH dehydrogenase I subunit J [Candidatus Pelagibacter ubique
HTCC1062]
gi|91761988|ref|ZP_01263953.1| NADH Dehydrogenase I Chain J [Candidatus Pelagibacter ubique
HTCC1002]
gi|71062704|gb|AAZ21707.1| NADH Dehydrogenase I Chain J [Candidatus Pelagibacter ubique
HTCC1062]
gi|91717790|gb|EAS84440.1| NADH Dehydrogenase I Chain J [Candidatus Pelagibacter ubique
HTCC1002]
Length = 210
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 121/206 (58%), Gaps = 7/206 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ ++FFY FSF+AI+S+ +V +N ++SVF LI F++ + LF+++GAEF+ MI L+
Sbjct: 1 MLAHAIFFYTFSFIAIVSAIMVTVSKNTVHSVFFLILDFISISCLFIMIGAEFLGMIMLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MML++ + + + IG++ + +I ++ + +
Sbjct: 61 VYVGAVAVLFLFVVMMLNVAQQKNQWFSAQESSKHIPIGLIVSVIIFFELIIVIGGWKYK 120
Query: 121 LS-------RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ N +IG VLYT Y + ++SG ILL++MIGAIVL R R +KR
Sbjct: 121 PDLVSAMSLTIDKNITNTHSIGYVLYTDYIHVFQLSGMILLVAMIGAIVLTFRQRSGVKR 180
Query: 174 QDISKQLESNPDNSIVMVKVKSGKGI 199
Q Q+ + + ++ V++ KG+
Sbjct: 181 QSYFSQISRERSDGVELIDVENNKGV 206
>gi|307942128|ref|ZP_07657479.1| NADH-quinone oxidoreductase subunit j [Roseibium sp. TrichSKD4]
gi|307774414|gb|EFO33624.1| NADH-quinone oxidoreductase subunit j [Roseibium sp. TrichSKD4]
Length = 204
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 84/204 (41%), Positives = 134/204 (65%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FFYLF+ + + S+F+V+ RNP++SV LI AFVN+AGLF+LLGAE++AM+ +V
Sbjct: 1 MFLNAFFFYLFAGVTVASAFMVIAARNPVHSVLFLILAFVNSAGLFVLLGAEYLAMLLIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF----- 115
VYVGAV V FLF++MM+D+D + +G++ ++ + +
Sbjct: 61 VYVGAVAVLFLFVVMMMDVDFAELRQGFLQYLPAGALVGLVLLIELLMGVSAWILAPGLI 120
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
E + + + +N+E IG+VLYT+Y Y ++SG +LL++MIGAIVL LRH+ KRQD
Sbjct: 121 GQGSEPTPALNEVSNIEAIGQVLYTKYIYFFQVSGLVLLVAMIGAIVLTLRHKPYAKRQD 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I+ Q+ ++++ + KV++GKGI
Sbjct: 181 IATQVGRRREDAVEVRKVETGKGI 204
>gi|221199665|ref|ZP_03572709.1| NADH dehydrogenase I, J subunit [Burkholderia multivorans CGD2M]
gi|221205435|ref|ZP_03578450.1| NADH dehydrogenase I, J subunit [Burkholderia multivorans CGD2]
gi|221174273|gb|EEE06705.1| NADH dehydrogenase I, J subunit [Burkholderia multivorans CGD2]
gi|221180950|gb|EEE13353.1| NADH dehydrogenase I, J subunit [Burkholderia multivorans CGD2M]
Length = 216
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 114/200 (57%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDFLRRDFKRFVPMATVVGAIIVIETALILWRGYGDTHAV 120
Query: 121 L---SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
S +N IGKV+YT Y + EI+G +LL+++I AI L +D KRQ +S
Sbjct: 121 HAMTSGATEGWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTSHKGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
Q++ D+ + +VK+++ K
Sbjct: 181 DQVKVRRDDRVRLVKMEADK 200
>gi|126727167|ref|ZP_01743004.1| NADH dehydrogenase subunit J [Rhodobacterales bacterium HTCC2150]
gi|126703595|gb|EBA02691.1| NADH dehydrogenase subunit J [Rhodobacterales bacterium HTCC2150]
Length = 204
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 125/204 (61%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M FYLF+ + + S L V R P++SV LI AF ++AGLF+LLGAEF+AM+ ++
Sbjct: 1 MTFFDFTFYLFAIVTVGSGLLCVLARQPVHSVLWLICAFFSSAGLFVLLGAEFIAMLLVI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + + + IG++ + S + E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAQLKAEMAKFMPVALLIGVVLLMELGLVFGSWTVSPDAE 120
Query: 121 -----LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
++ + + +N +G+++YT+Y Y + +G ILL++MIGAIVL LRHR+D+KRQ
Sbjct: 121 GLRAAVTPALDEVHNTAALGQLIYTKYIYLFQAAGLILLVAMIGAIVLTLRHRKDVKRQV 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I Q+ +P +++ + VK G+G+
Sbjct: 181 IRDQILRDPKDAMEIKDVKPGQGL 204
>gi|161524213|ref|YP_001579225.1| NADH dehydrogenase subunit J [Burkholderia multivorans ATCC 17616]
gi|189351030|ref|YP_001946658.1| NADH dehydrogenase subunit J [Burkholderia multivorans ATCC 17616]
gi|221211744|ref|ZP_03584723.1| NADH dehydrogenase I, J subunit [Burkholderia multivorans CGD1]
gi|160341642|gb|ABX14728.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
multivorans ATCC 17616]
gi|189335052|dbj|BAG44122.1| NADH dehydrogenase I chain J [Burkholderia multivorans ATCC 17616]
gi|221169105|gb|EEE01573.1| NADH dehydrogenase I, J subunit [Burkholderia multivorans CGD1]
Length = 216
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 114/200 (57%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDFLRRDFKRFVPMATVVGAIIVIETALILWRGYGDTHAV 120
Query: 121 L---SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
S +N IGKV+YT Y + EI+G +LL+++I AI L +D KRQ +S
Sbjct: 121 HAMTSGATEGWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTSHKGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
Q++ ++ + +VK+++ K
Sbjct: 181 DQVKVRRNDRVRLVKMEADK 200
>gi|254251870|ref|ZP_04945188.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Burkholderia
dolosa AUO158]
gi|124894479|gb|EAY68359.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Burkholderia
dolosa AUO158]
Length = 216
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDYLRRDFKRFVPMATVVGAIIVIETALILWRGYGDTHTV 120
Query: 121 L---SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
S +N IGKV+YT Y + EI+G +LL+++I AI L + +D KRQ +S
Sbjct: 121 HAMTSAATEGWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTAQKGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
+Q++ ++ + +VK+++ K
Sbjct: 181 EQVKVRRNDRVRLVKMEADK 200
>gi|163759531|ref|ZP_02166616.1| NADH dehydrogenase subunit J [Hoeflea phototrophica DFL-43]
gi|162283128|gb|EDQ33414.1| NADH dehydrogenase subunit J [Hoeflea phototrophica DFL-43]
Length = 204
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 95/204 (46%), Positives = 133/204 (65%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFY+F+F+A+ S+F+V+ RNP++SV LI F NAAGLFLL GAEF+AMI LV
Sbjct: 1 MGLQALFFYMFAFVAVASAFMVIAARNPVHSVLFLILTFFNAAGLFLLTGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID + +GI+ A ++ FS
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFTEMKSGALEYAPVGALVGIILAAELIIVLGGNAFSPSAA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
S + + +N + +G VLYT Y + +I+G +L ++MIGAIVL LRHR IKRQD
Sbjct: 121 TSGANPIPALSERSNTQALGDVLYTDYIFFFQIAGLVLFVAMIGAIVLTLRHREHIKRQD 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I++Q+ P+ ++ +VKVK G+GI
Sbjct: 181 INQQVARTPETAVEVVKVKPGQGI 204
>gi|241663475|ref|YP_002981835.1| NADH dehydrogenase subunit J [Ralstonia pickettii 12D]
gi|309781861|ref|ZP_07676594.1| NADH dehydrogenase (ubiquinone), J subunit [Ralstonia sp.
5_7_47FAA]
gi|240865502|gb|ACS63163.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Ralstonia
pickettii 12D]
gi|308919502|gb|EFP65166.1| NADH dehydrogenase (ubiquinone), J subunit [Ralstonia sp.
5_7_47FAA]
Length = 210
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 64/199 (32%), Positives = 117/199 (58%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FY F+ + ++++ V+T +NP+++ L+ +F AA +++LL AEF+A+ ++
Sbjct: 1 MEITTIIFYCFALVLVLAALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--NFMVFSAE 118
VYVGAV+V FLF++MM+DIDIE + F+G++ + FM
Sbjct: 61 VYVGAVMVLFLFVVMMIDIDIEHLRRDFWTYVPMAAFVGVVIILEMAVVLTKTFMGRVQP 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ F G N + +GK++YT Y Y E++G +LLL+++ A+ L R R+D K Q++S
Sbjct: 121 VQELPKGFNGPNTQALGKLIYTDYIYAFEVAGAVLLLAIVAAVALTARRRKDTKAQNVSD 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ + + +V + + K
Sbjct: 181 QIRVKRKDRVRLVSMPAEK 199
>gi|253996964|ref|YP_003049028.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylotenera
mobilis JLW8]
gi|253983643|gb|ACT48501.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylotenera
mobilis JLW8]
Length = 226
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 2/196 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
Q + FY + + +I+ V+T RNP+Y+ L+ AF AAG++LLL AEF+A+ ++VY
Sbjct: 8 FQDIVFYTLATILLIAGLRVITTRNPVYAALYLVLAFFTAAGIWLLLEAEFLAIALVLVY 67
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV+V FLF++MMLDI+++ + + +G L A +V F + +
Sbjct: 68 VGAVMVLFLFVVMMLDINLDKLREGFWKALPVALPVGGLMAVEMVMVVGARNFGVDVVAA 127
Query: 123 RLV--FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+N +G+VLYT Y E++ +LL++++ AI L LR RRD K D +KQ+
Sbjct: 128 PPAHPADYSNTAELGRVLYTDYLLSFELASVVLLVAIVAAIALTLRDRRDSKSMDPAKQV 187
Query: 181 ESNPDNSIVMVKVKSG 196
+ I +VK+++
Sbjct: 188 LVKKADRIRIVKMEAE 203
>gi|134296424|ref|YP_001120159.1| NADH dehydrogenase subunit J [Burkholderia vietnamiensis G4]
gi|134139581|gb|ABO55324.1| NADH dehydrogenase subunit J [Burkholderia vietnamiensis G4]
Length = 216
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 69/200 (34%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ K+ + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDFLRRDFKKFVPMATVVGAIIVVETALILWRGYGDTHTV 120
Query: 121 LS---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + +N IGKV+YT Y + EI+G +LL+++I AI L RH +D KRQ +S
Sbjct: 121 HAMATGAMADWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIGLTARHGKDSKRQRVS 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
Q++ ++ + +VK+++ K
Sbjct: 181 DQVKVRRNDRVRLVKMEADK 200
>gi|90423914|ref|YP_532284.1| NADH dehydrogenase subunit J [Rhodopseudomonas palustris BisB18]
gi|90105928|gb|ABD87965.1| NADH dehydrogenase (quinone) [Rhodopseudomonas palustris BisB18]
Length = 212
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 87/202 (43%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + LFFYL+S + + ++ +V+ RNP+++V LI FVNAAGLF+L+GAEF+AMI ++
Sbjct: 1 MTLPDLFFYLYSGVCVAAATMVIVSRNPVHAVLFLILVFVNAAGLFMLMGAEFLAMILII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--- 117
VYVGAV V FLF+IMMLDID + IG++ ++ + V
Sbjct: 61 VYVGAVAVLFLFVIMMLDIDFKQLREGFFEYLPFGLLIGVIFLAELLLLAGGWVIHPTLT 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + + +N E +G VLYT+Y + +ISG ILL++MIGAIVL +RHR +KRQ+IS
Sbjct: 121 KAITAPIPDNISNTEALGMVLYTRYIHYFQISGLILLVAMIGAIVLTMRHRVSVKRQNIS 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q NP+ ++ + KV SG+G+
Sbjct: 181 AQNARNPETAMDVRKVASGQGL 202
>gi|207723882|ref|YP_002254280.1| transmembrane nadh dehydrogenaseI(chain j) protein [Ralstonia
solanacearum MolK2]
gi|206589087|emb|CAQ36049.1| transmembrane nadh dehydrogenaseI(chain j) protein [Ralstonia
solanacearum MolK2]
Length = 210
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/199 (32%), Positives = 114/199 (57%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FY FS + ++S+ V+T +NP+++ L+ +F AA +++LL AEF+A+ ++
Sbjct: 1 MEITTIIFYCFSLVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN--FMVFSAE 118
VYVGAV+V FLF++MM+D+DIE F+G + + FM S
Sbjct: 61 VYVGAVMVLFLFVVMMIDVDIEHLRRDFWTYVPMGAFVGAIIIMEMAVVLTKAFMGRSQP 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ G N + +GK++YT Y Y EI+G +LLL+++ A+ L R R+D K Q ++
Sbjct: 121 VQELPKALSGPNTQALGKLIYTDYLYAFEIAGAVLLLAIVAAVALTARRRKDTKAQKVAD 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ + + +V + + K
Sbjct: 181 QVRVQRKDRVRLVSMPAEK 199
>gi|83746306|ref|ZP_00943359.1| NADH-quinone oxidoreductase chain J [Ralstonia solanacearum UW551]
gi|207742744|ref|YP_002259136.1| transmembrane nadh dehydrogenaseI(chain j) protein [Ralstonia
solanacearum IPO1609]
gi|300703651|ref|YP_003745253.1| NADH-quinone oxidoreductase subunit j [Ralstonia solanacearum
CFBP2957]
gi|83727056|gb|EAP74181.1| NADH-quinone oxidoreductase chain J [Ralstonia solanacearum UW551]
gi|206594138|emb|CAQ61065.1| transmembrane nadh dehydrogenaseI(chain j) protein [Ralstonia
solanacearum IPO1609]
gi|299071314|emb|CBJ42632.1| NADH-quinone oxidoreductase subunit J [Ralstonia solanacearum
CFBP2957]
Length = 210
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 66/199 (33%), Positives = 114/199 (57%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FY FS + ++S+ V+T +NP+++ L+ +F AA +++LL AEF+A+ ++
Sbjct: 1 MEITTIIFYCFSLVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN--FMVFSAE 118
VYVGAV+V FLF++MM+DIDIE F+G + + FM S
Sbjct: 61 VYVGAVMVLFLFVVMMIDIDIEHLRRDFWTYVPMGAFVGAVIIMEMAVVLTKAFMGRSQP 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ G N + +GK++YT Y Y EI+G +LLL+++ A+ L R R+D K Q ++
Sbjct: 121 VQELPKALSGPNTQALGKLIYTDYLYAFEIAGAVLLLAIVAAVALTARRRKDTKAQKVAD 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ + + +V + + K
Sbjct: 181 QVRVQRKDRVRLVSMPAEK 199
>gi|299135023|ref|ZP_07028214.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Afipia sp.
1NLS2]
gi|298590000|gb|EFI50204.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Afipia sp.
1NLS2]
Length = 212
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 88/202 (43%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++ +LFFYLF+ + + S+ +VVT RNP++SV LI FVNAAGLF+LL AEF+AMI +V
Sbjct: 1 MILPALFFYLFAGVCVASAVMVVTARNPVHSVLFLILTFVNAAGLFVLLNAEFLAMILIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF+IMMLD+D IG + ++ + V S
Sbjct: 61 VYVGAVAVLFLFVIMMLDVDFAELRQGFIEYLPVGLLIGAIFLAELLLVAGGWVLSPNVA 120
Query: 121 LS---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
S + N E IG VLYT+Y + +++G +LL++MIGAIVL LRH+ +KRQ+IS
Sbjct: 121 HSITAPIPATVTNTEAIGLVLYTRYIHYFQLAGLVLLVAMIGAIVLTLRHKPSVKRQNIS 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q ++ + +V SG+G+
Sbjct: 181 AQNARGKATAMAVRQVPSGQGL 202
>gi|89053681|ref|YP_509132.1| NADH dehydrogenase subunit J [Jannaschia sp. CCS1]
gi|88863230|gb|ABD54107.1| NADH dehydrogenase subunit J [Jannaschia sp. CCS1]
Length = 205
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 120/205 (58%), Gaps = 6/205 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FYLF+ + VT +NP++SV LI AF+++AGLF+LLGAEFVAM+ ++
Sbjct: 1 MTIVDFTFYLFALSVVAGGLFTVTSKNPVHSVLWLILAFLSSAGLFVLLGAEFVAMLMII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + + IG++ + A + +
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELKAEMAKYVPLGGLIGVILLMQLTLAFGVWEAADGVD 120
Query: 121 LSRLVF------KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+S +N + +G ++Y Y ++SG ILL++M+GAIVL LRHR D+KRQ
Sbjct: 121 ISATPIGTPEGAGDHNTQALGLIVYDDYFLAFQLSGLILLVAMVGAIVLTLRHRVDVKRQ 180
Query: 175 DISKQLESNPDNSIVMVKVKSGKGI 199
D+ Q+ +P ++ + VK G+G+
Sbjct: 181 DVVAQMMRDPAKAMELKDVKPGQGL 205
>gi|187929284|ref|YP_001899771.1| NADH dehydrogenase subunit J [Ralstonia pickettii 12J]
gi|187726174|gb|ACD27339.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Ralstonia
pickettii 12J]
Length = 210
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 64/199 (32%), Positives = 117/199 (58%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FY F+ + ++++ V+T +NP+++ L+ +F AA +++LL AEF+A+ ++
Sbjct: 1 MEITTIIFYCFALVLVLAALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--NFMVFSAE 118
VYVGAV+V FLF++MM+DIDIE + F+G++ + FM
Sbjct: 61 VYVGAVMVLFLFVVMMIDIDIEHLRRDFWTYVPMAAFVGVVIILEMAVVLTKTFMGRVQP 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ F G N + +GK++YT Y Y E++G +LLL+++ A+ L R R+D K Q++S
Sbjct: 121 VQELPKGFTGPNTQALGKLIYTDYIYAFEVAGAVLLLAIVAAVALTARRRKDTKAQNVSD 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ + + +V + + K
Sbjct: 181 QIRVKRKDRVRLVSMPAEK 199
>gi|221234956|ref|YP_002517392.1| NADH dehydrogenase subunit J [Caulobacter crescentus NA1000]
gi|220964128|gb|ACL95484.1| NADH-quinone oxidoreductase chain J [Caulobacter crescentus NA1000]
Length = 217
Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 87/203 (42%), Positives = 127/203 (62%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q++ FYL +F+ I + LVV+ RNP++SV LI AF +AAGLF+LLGAEF+AM+ +V
Sbjct: 13 MPVQAIAFYLLAFVTIAAGLLVVSARNPVHSVLFLITAFFSAAGLFVLLGAEFLAMLLVV 72
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + I ++ A +V + +
Sbjct: 73 VYVGAVAVLFLFVVMMLDVDFAELRQGFVQYLPFGGLIALVIAIEMVMVVAAVATNGAAA 132
Query: 121 LSRLVF----KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ L N E IG+VLYT Y + +++G +LL++MIGAIVL LRH+ +KRQDI
Sbjct: 133 KNPLPNASPGGVPNTEAIGRVLYTDYVFFFQLAGLVLLVAMIGAIVLTLRHKPGVKRQDI 192
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
KQ+ P + +V++K G+GI
Sbjct: 193 GKQVARTPKTGMELVQIKPGEGI 215
>gi|167585981|ref|ZP_02378369.1| NADH dehydrogenase subunit J [Burkholderia ubonensis Bu]
Length = 217
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILA----AELIVCASNFMVFS 116
VYVGAV+V FLF++MMLDI+I+ K+ + +G + A ++
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDFLRRDFKKFVPMATVVGAIIVVETALVLWHGYGATEAP 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ N IGKV+YT Y + EI+G +LL+++I A+ L R +D KRQ +
Sbjct: 121 VRAMAQGAMATWPNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAVALTERKGKDSKRQRV 180
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
S Q++ D+ + +VK+++ K
Sbjct: 181 SDQVKVRRDDRVRLVKMEADK 201
>gi|254469512|ref|ZP_05082917.1| NADH-quinone oxidoreductase chain j [Pseudovibrio sp. JE062]
gi|211961347|gb|EEA96542.1| NADH-quinone oxidoreductase chain j [Pseudovibrio sp. JE062]
Length = 204
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 92/204 (45%), Positives = 140/204 (68%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV+Q+LFFYLF+ +A+ S+F+V+ RNP++SV LI F NAAGLF+L+GAE++AM+ +V
Sbjct: 1 MVLQALFFYLFAALAVASAFMVIASRNPVHSVLFLILCFFNAAGLFVLIGAEYLAMLLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAE- 118
VYVGAV+V FLF++MMLD+D + IG IL EL++ S + +
Sbjct: 61 VYVGAVMVLFLFVVMMLDVDFAEMRQGFLQYLPIGALIGVILLVELLMVVSGWYIAPGML 120
Query: 119 ---GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ V + N+ IG++LYT+Y Y +++G +LL++MIGAIVL LRH+ ++RQ+
Sbjct: 121 GEGSAPTPPVEQTQNIAAIGELLYTRYIYWFQVAGLVLLVAMIGAIVLTLRHKPGVRRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
IS+Q+ P+ +I +VKV+SGKG+
Sbjct: 181 ISEQVARRPETAIEVVKVESGKGL 204
>gi|255263382|ref|ZP_05342724.1| NADH-quinone oxidoreductase subunit j [Thalassiobium sp. R2A62]
gi|255105717|gb|EET48391.1| NADH-quinone oxidoreductase subunit j [Thalassiobium sp. R2A62]
Length = 201
Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY F+ I V RNP++SV LI AF+++AGLF+LLGAEFVAM+ ++
Sbjct: 1 MTPVVIAFYAFAVSTIAGGLFTVISRNPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS--AE 118
VYVGAV V FLF++MMLD+D + + IG++ + A +S +
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELKAEMSKYLPLGLLIGVIVLMQLSLAFGVWDYSEGYQ 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
L+ N E +G +LY +Y +++G ILL++MIGAIVL LRHR D+KRQ+I
Sbjct: 121 TRLAAPEGDAMNTEALGLLLYDKYILLFQLAGLILLVAMIGAIVLTLRHREDVKRQNIVS 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ +P + + VK G+G+
Sbjct: 181 QILRDPAKQMKLKDVKPGQGL 201
>gi|319779207|ref|YP_004130120.1| NADH-ubiquinone oxidoreductase chain J [Taylorella equigenitalis
MCE9]
gi|317109231|gb|ADU91977.1| NADH-ubiquinone oxidoreductase chain J [Taylorella equigenitalis
MCE9]
Length = 263
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 104/197 (52%), Gaps = 1/197 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FYL + + + + VV R+P+ V LI AF NA+ L++L+GAEF+ ++ ++
Sbjct: 1 MTFTDILFYLLAIVLLYAGVRVVLARHPVVGVLHLILAFFNASMLWILIGAEFLGLLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGAV+V FLF++MM+D+ E + +G + I +
Sbjct: 61 IYVGAVMVLFLFVVMMVDVVPETLRKDFRTYLPIGLVVGGVMVSEIAFILGSAYLDSSSP 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
S N + +G +Y++Y+YP+++ ILL+ MI AI L LR R++ K +S QL
Sbjct: 121 KSWPDTYNNTL-ALGIEMYSKYSYPIQVGALILLVGMIAAIALTLRERKNRKYVLVSDQL 179
Query: 181 ESNPDNSIVMVKVKSGK 197
+ + + +V + S
Sbjct: 180 KVEAKDRVRLVSLPSEP 196
>gi|149927550|ref|ZP_01915804.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Limnobacter
sp. MED105]
gi|149823823|gb|EDM83049.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Limnobacter
sp. MED105]
Length = 210
Score = 147 bits (371), Expect = 8e-34, Method: Composition-based stats.
Identities = 62/195 (31%), Positives = 111/195 (56%), Gaps = 2/195 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FFY+F+ + + ++ V+T N +++ L+ +F +A+ L++LL AEF+A+ ++
Sbjct: 1 MDAITGFFYVFAAILVFAAVRVITASNAVHAALYLVLSFFSASALWMLLEAEFLAISLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MM+D++++ + + +G L A + + E
Sbjct: 61 VYVGAVMVLFLFVVMMVDVNMDKVRAGFWKNLPVAAIVGSLIAFQMSVVLLRGFWDPNLE 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
N E +GK+LYT+Y YP E++ ILL++M+ AI L LR R+D K Q S Q+
Sbjct: 121 TPEQAAN--NTEALGKLLYTEYLYPFEVAALILLVAMVAAIALTLRKRKDTKGQVPSDQV 178
Query: 181 ESNPDNSIVMVKVKS 195
+ + +V + +
Sbjct: 179 RVKSTDRVKLVSMPA 193
>gi|254439778|ref|ZP_05053272.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Octadecabacter antarcticus 307]
gi|198255224|gb|EDY79538.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Octadecabacter antarcticus 307]
Length = 201
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 121/201 (60%), Gaps = 2/201 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY F+ I + V RNP++SV LI AF+++AGLF+LLGAEFVAM+ ++
Sbjct: 1 MTPVVIAFYAFAATTIGGGLMTVLARNPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + R + IG++ + A +S E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGVVLLMQLAMAFGVWDYSDGFE 120
Query: 121 L--SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
++ + N + +G V+Y Y ++SG ILL++MIGAIVL LRHR D+KRQ++
Sbjct: 121 TRLAQPIVDVENTKQLGLVIYDDYFLIFQLSGLILLVAMIGAIVLTLRHRTDVKRQNVMV 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ +P ++ + VK G+G+
Sbjct: 181 QMSRDPAKAMELKDVKPGQGL 201
>gi|209885061|ref|YP_002288918.1| j subunit of NADH dehydrogenase i [Oligotropha carboxidovorans OM5]
gi|209873257|gb|ACI93053.1| j subunit of NADH dehydrogenase i [Oligotropha carboxidovorans OM5]
Length = 212
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 89/202 (44%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++ +LFFYLF+ + + S+ +VVT RNP++SV LI FVNAAGLF+LL AEF+AMI +V
Sbjct: 1 MILPALFFYLFAGVCVASAVMVVTARNPVHSVLFLILTFVNAAGLFVLLNAEFLAMILIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF+IMMLD+D +G + ++ V S +
Sbjct: 61 VYVGAVAVLFLFVIMMLDVDFAALRQGFIEYLPVGLLVGAIFLVELLLVVGGWVLSPDVA 120
Query: 121 LS---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
S + N E IG VLYT+Y + +++G +LL++MIGAIVL LRH+ ++KRQ+IS
Sbjct: 121 HSITAPIPTTVTNTEAIGLVLYTRYIHYFQLAGLVLLVAMIGAIVLTLRHKPNVKRQNIS 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q +I M KV G+G+
Sbjct: 181 VQNARGKATAIAMRKVAPGQGL 202
>gi|15888608|ref|NP_354289.1| NADH dehydrogenase subunit J [Agrobacterium tumefaciens str. C58]
gi|15156330|gb|AAK87074.1| NADH ubiquinone oxidoreductase chain J [Agrobacterium tumefaciens
str. C58]
Length = 204
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 91/204 (44%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++FFY+F+F+A+ S+F+V+ +NP++SV LI F NAA LFLL GAEF+AMI LV
Sbjct: 1 MGLHAVFFYIFAFVAVASAFMVIASKNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + IG++ A ++ + +
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELRSGVLQYAPIGALIGVILAAELIVVVGGSMLNPIAA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
S + N +G VLYT Y Y +++G +LL++MIGAIVL LRHR DIKRQD
Sbjct: 121 KSITMPIPPAAERTNTAALGDVLYTNYVYFFQLAGLVLLVAMIGAIVLTLRHRTDIKRQD 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
IS Q+ +P ++ VKVK G+GI
Sbjct: 181 ISTQVGRDPKTAVTTVKVKPGQGI 204
>gi|146278032|ref|YP_001168191.1| NADH dehydrogenase subunit J [Rhodobacter sphaeroides ATCC 17025]
gi|145556273|gb|ABP70886.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Rhodobacter
sphaeroides ATCC 17025]
Length = 204
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 76/204 (37%), Positives = 123/204 (60%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + L FY F+ A+ ++ +VVT RN +++V LI F+++AG+F+LLGAEFVAM+ ++
Sbjct: 1 MSVADLAFYCFAVPAVFAALMVVTQRNMVHAVLWLILVFLSSAGMFVLLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D E + R + IGI+ + V +
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFEALKSEMARYMPVAALIGIVILLQLSMGIGAWVTAEGAP 120
Query: 121 -----LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + N +G ++Y +Y Y + +G ILL++M+GAI+L LR RRD+KRQ+
Sbjct: 121 GLRQAPTPDPNQIENSRALGLLIYDKYLYLFQTAGLILLVAMVGAILLTLRERRDVKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
+ Q+ +P ++ + VK G+G+
Sbjct: 181 VLAQMWRDPAEAMELKDVKPGQGL 204
>gi|167646785|ref|YP_001684448.1| NADH dehydrogenase subunit J [Caulobacter sp. K31]
gi|167349215|gb|ABZ71950.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Caulobacter
sp. K31]
Length = 203
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 88/201 (43%), Positives = 125/201 (62%), Gaps = 4/201 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
MQ++ FYL + +++ LVV+ RNP++SV LI AF +AAGLF+LLGAEF+AM+ +VVY
Sbjct: 1 MQAIAFYLLAVATVVAGLLVVSARNPVHSVLFLITAFFSAAGLFVLLGAEFLAMLLIVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL-GSFFIGILAAELIVCASNFMVFSAEGEL 121
VGAV V FLF++MMLD+D + G G L E+I A+ G
Sbjct: 61 VGAVAVLFLFVVMMLDVDFTELRQGFAQYLPIGGLVAGFLTLEMIFIAATVATNGKAGLN 120
Query: 122 SRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V E IG+VLYT Y + +++G +LL++MIGAIVL LRH+ +KRQDI K
Sbjct: 121 ALPNASPGGVPNTEAIGRVLYTDYVFFFQLAGLVLLVAMIGAIVLTLRHKAGVKRQDIGK 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ P + +V++K G+GI
Sbjct: 181 QIARTPKTGMEIVQIKPGEGI 201
>gi|325292643|ref|YP_004278507.1| NADH dehydrogenase I chain J [Agrobacterium sp. H13-3]
gi|325060496|gb|ADY64187.1| NADH dehydrogenase I chain J [Agrobacterium sp. H13-3]
Length = 204
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 92/204 (45%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++FFY+F+F+A+ S+F+V+ +NP++SV LI F NAA LFLL GAEF+AMI LV
Sbjct: 1 MGLHAVFFYIFAFVAVASAFMVIASKNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + IGI+ A ++ V + +
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELRSGVLQYAPIGALIGIILAAELIVVVGGSVLNPQAA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
S N +G VLYT Y Y +++G +LL++MIGAIVL LRHR DIKRQ+
Sbjct: 121 KSITMPIPSPAVRTNTAALGDVLYTNYVYFFQLAGLVLLVAMIGAIVLTLRHRTDIKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
IS Q+ +P ++ VKVK G+GI
Sbjct: 181 ISTQVGRDPKTAVTTVKVKPGQGI 204
>gi|91789107|ref|YP_550059.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Polaromonas
sp. JS666]
gi|91698332|gb|ABE45161.1| NADH dehydrogenase subunit J [Polaromonas sp. JS666]
Length = 217
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 120/198 (60%), Gaps = 3/198 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + + ++F V+T RNP+++ L+ AF AA +++LL AEF+A+ ++
Sbjct: 1 MDAKTGLFYVFAAVLLFAAFRVITARNPVHAALYLVLAFFQAAAVWILLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ + F + +G + A +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDSVRKGFWKHFPLAGTVGAIIALEMSYVLMGGFREPPKA 120
Query: 121 LS---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
S ++ + +N + +GK+LY++Y YPLE++ ILL++MI AI L LR R+D K + S
Sbjct: 121 ASAPGQIGAQVSNTKELGKLLYSEYLYPLEVAAVILLVAMIAAIALTLRQRKDTKYINPS 180
Query: 178 KQLESNPDNSIVMVKVKS 195
Q+ + + +VK+KS
Sbjct: 181 DQIRVKRGDRVSLVKMKS 198
>gi|325983280|ref|YP_004295682.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosomonas
sp. AL212]
gi|325532799|gb|ADZ27520.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosomonas
sp. AL212]
Length = 201
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 71/199 (35%), Positives = 116/199 (58%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ Q + FY FS + I+S+ V+ VRNP+ S L+ +FV AGL+LLL AEF+A+ ++
Sbjct: 1 MIFQDILFYSFSAILIVSALGVIIVRNPVNSALLLVLSFVTCAGLWLLLEAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI--VCASNFMVFSAE 118
VYVGAV+V FLF++MMLDI+++ + F I ++ I V + +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDRLREGFWKWFPFGAMIALVIVVEISMVLMGKYFGYEEM 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+N + +G+++YT+Y Y E++ +LL++MI AI L LRHR D K + K
Sbjct: 121 PIPEPKGADYSNTKELGRLIYTEYVYAFELAAVLLLVAMIAAIALTLRHREDKKSTNPFK 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q++ ++ I +V + + K
Sbjct: 181 QVKVKKEDRIRIVSMSAEK 199
>gi|82702229|ref|YP_411795.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Nitrosospira
multiformis ATCC 25196]
gi|82410294|gb|ABB74403.1| NADH dehydrogenase subunit J [Nitrosospira multiformis ATCC 25196]
Length = 201
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/199 (34%), Positives = 115/199 (57%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY FS + + S+ V+T RNP++S L+ AF +AGL+LLL AEF+A+ ++
Sbjct: 1 MSFTDIIFYFFSAVLVASALGVITARNPVHSALLLVLAFFASAGLWLLLEAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI++ + F +G++ + + F A
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLARLREGFWKWFPFGLLLGLVMSIEMAMVLTGKQFGANEL 120
Query: 121 LSRL--VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ +N + +G+++YT+Y Y E++ ILL++++ AI L LR R + K D++K
Sbjct: 121 PAPAARAADYSNTKELGRLIYTEYVYAFELAAVILLVAIVAAIALTLRQRGESKSMDVAK 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ ++ I +V + S K
Sbjct: 181 QVAVKREDRIRIVSMASEK 199
>gi|99080597|ref|YP_612751.1| NADH dehydrogenase subunit J [Ruegeria sp. TM1040]
gi|99036877|gb|ABF63489.1| NADH dehydrogenase (quinone) [Ruegeria sp. TM1040]
Length = 200
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 81/200 (40%), Positives = 120/200 (60%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ AI V R P++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLD+D + R + IG++ V A + +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYTPLALLIGLVILMQFVIAYGSWESAHSVAEN 120
Query: 123 ---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ +N E +G +LY QY +++G ILL++MIGAIVL LRHR+D+KRQD+ Q
Sbjct: 121 LSQPIPTDRHNTEALGLILYDQYFLLFQLAGLILLVAMIGAIVLTLRHRQDVKRQDVLAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + +K G+G+
Sbjct: 181 MYRDPAKAMELKDIKPGQGL 200
>gi|113867079|ref|YP_725568.1| NADH dehydrogenase subunit J [Ralstonia eutropha H16]
gi|113525855|emb|CAJ92200.1| NADH dehydrogenase chain J [Ralstonia eutropha H16]
Length = 214
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/199 (33%), Positives = 116/199 (58%), Gaps = 3/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY+F+ + ++S+ V+T +NP++S L+ +F AA +++LL AEF+A++ ++
Sbjct: 1 MELTTTIFYVFALVLVLSALKVITAKNPVHSALFLVLSFFTAAAIWMLLKAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MM+DIDIE + +G L +
Sbjct: 61 VYVGAVMVLFLFVVMMIDIDIEHLRRDFWTYVPMASVVGALIIAEMAIVLVRNFIGTTTP 120
Query: 121 LSRL---VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
++ +N +GK++YT Y Y E++G ILL+++I A+ L LR R+D+K QD+S
Sbjct: 121 VATNGSQDPGYSNTAALGKLIYTDYIYAFEVAGIILLVAIIAAVALTLRRRKDVKAQDVS 180
Query: 178 KQLESNPDNSIVMVKVKSG 196
QL + D + +V ++S
Sbjct: 181 AQLRTRRDERVRLVPMQSE 199
>gi|296536147|ref|ZP_06898275.1| NADH-quinone oxidoreductase subunit J [Roseomonas cervicalis ATCC
49957]
gi|296263518|gb|EFH10015.1| NADH-quinone oxidoreductase subunit J [Roseomonas cervicalis ATCC
49957]
Length = 241
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 81/203 (39%), Positives = 119/203 (58%), Gaps = 7/203 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ +L FY+F+ + I S+ +VVT RNP++SV LI AF NAA LFL+ GAEF+AMI ++V
Sbjct: 1 MIAALAFYVFAAILIASAVMVVTSRNPVHSVLFLILAFFNAAALFLIAGAEFLAMILVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE- 120
YVGAV V FLFI+MMLDID +R IG + ++ F+ +
Sbjct: 61 YVGAVAVLFLFIVMMLDIDFARLREGFQRYAPIGAVIGAILFLELLFVFGSWQFAPDAAA 120
Query: 121 ---LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR-DIKRQDI 176
N E +G ++YT Y + +++G ILL++MIGAIVL LR + + KRQDI
Sbjct: 121 LRLNPAPDAGVTNTEALGLLVYTDYVFLFQLAGLILLVAMIGAIVLTLRDKPANSKRQDI 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+ Q+ ++ M +V S G+
Sbjct: 181 AVQVAR--GEAVTMKQVPSRAGL 201
>gi|118590028|ref|ZP_01547432.1| NADH dehydrogenase subunit J [Stappia aggregata IAM 12614]
gi|118437525|gb|EAV44162.1| NADH dehydrogenase subunit J [Stappia aggregata IAM 12614]
Length = 229
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 86/204 (42%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++++LFFYLF+ + + S+F+V+ RNP+ SV LI AFVN+AGLF+LLGAE++A++ +V
Sbjct: 26 MILKALFFYLFAGVTLASAFMVIASRNPVTSVLFLILAFVNSAGLFILLGAEYLALLLVV 85
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM-----VF 115
VYVGAV V FLF++MMLD+D + +G++ ++ V
Sbjct: 86 VYVGAVAVLFLFVVMMLDVDFVELRQGFLQYLPVGALVGVILLVELLMGLGAWVIAPGVL 145
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
E + +N++ IG VLYT+Y Y +++G +LL++MIGAIVL LRH+ ++KRQ
Sbjct: 146 GHGAEPMPALSDVSNIQAIGSVLYTKYIYFFQVAGLVLLVAMIGAIVLTLRHKPNVKRQS 205
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I Q+ N + SI + KV++GKGI
Sbjct: 206 IPDQVARNRETSIEVRKVETGKGI 229
>gi|167836058|ref|ZP_02462941.1| NADH dehydrogenase subunit J [Burkholderia thailandensis MSMB43]
Length = 218
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+FS + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MDFTTVLFYIFSLLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILA----AELIVCASNFMVFS 116
VYVGAV+V FLF++MMLDI+I+V +R + +G + A ++
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDVLRRDFRRFVPMATVVGAIIVVETALILWRGYGATGSP 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ N + IGKV+YT Y + EI+G +LL+++I A+ L + +D KRQ +
Sbjct: 121 VHDMAAGAAAGMPNTKLIGKVIYTDYIFAFEIAGLVLLVAIIAAVALTAQKGKDSKRQRV 180
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
S+Q++ ++ + +VK+++ K
Sbjct: 181 SEQVKVRREDRVRLVKMQADK 201
>gi|94309881|ref|YP_583091.1| NADH dehydrogenase subunit J [Cupriavidus metallidurans CH34]
gi|93353733|gb|ABF07822.1| NADH dehydrogenase chain J [Cupriavidus metallidurans CH34]
Length = 225
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 112/197 (56%), Gaps = 3/197 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY+F+ + ++S+ V+T +NP++S L+ AF AA ++++L AEF+A++ L+
Sbjct: 13 MELTTTIFYVFALVLVLSALKVITAKNPVHSALFLVLAFFTAAAIWMILKAEFLAILLLL 72
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MM+DIDIE + IG L +
Sbjct: 73 VYVGAVMVLFLFVVMMIDIDIEHLRRDFWTYVPMASIIGALIIAEMAIVLVRNFIGTTNA 132
Query: 121 LSRL---VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N +GK++YT Y Y E++G ILL+++I A+ L LR R+D+K QD+
Sbjct: 133 VLPPGAQDPNYSNTAALGKLIYTDYIYAFEVAGIILLVAIIAAVALTLRRRKDVKAQDVG 192
Query: 178 KQLESNPDNSIVMVKVK 194
QL D + +VK+
Sbjct: 193 AQLRVRRDERVRLVKLP 209
>gi|84686446|ref|ZP_01014340.1| NADH dehydrogenase subunit J [Maritimibacter alkaliphilus HTCC2654]
gi|84665629|gb|EAQ12105.1| NADH dehydrogenase subunit J [Rhodobacterales bacterium HTCC2654]
Length = 204
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 76/204 (37%), Positives = 120/204 (58%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY F+ ++ V RNP++SV LI AF+ +AGLF++LGAEF+AM+ ++
Sbjct: 1 MTVADFAFYAFAVTTLVGGLFTVLARNPVHSVLWLIMAFIGSAGLFVVLGAEFLAMLLMI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + + + I ++ + F+ E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELKAGMAKYMPLALLIAVVLLMQMGMIYGTWQFADGAE 120
Query: 121 LSRLVFKGNNVE-----NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+R + E +G+++Y Y ++SG +LL++MIGAIVL LRHR+DIKRQD
Sbjct: 121 AARRAVTPDMTEVENTAALGQLIYDDYFLLFQLSGLVLLVAMIGAIVLTLRHRKDIKRQD 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
+ Q+ +P ++ +V VK G+G+
Sbjct: 181 VLAQMYRDPAKALELVDVKPGQGL 204
>gi|74317169|ref|YP_314909.1| NADH dehydrogenase I subunit J [Thiobacillus denitrificans ATCC
25259]
gi|74056664|gb|AAZ97104.1| NADH dehydrogenase I chain J [Thiobacillus denitrificans ATCC
25259]
Length = 211
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 113/198 (57%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + FY F+ + + + V+T RNP+++ L+ AF AAGL+LLL AEF+A+ ++V
Sbjct: 1 MYTTAIFYFFAAILVFAGLRVITARNPVHAALFLVLAFFTAAGLWLLLEAEFLAITLVLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE--G 119
YVGAV+V FLF++MMLDI+++ + + IL + F + G
Sbjct: 61 YVGAVMVLFLFVVMMLDINLDQLREGFWNYLPLAGVVAILLVIEMALILGGRHFGLDVIG 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+N + +G+++YT Y Y E++ ILL++++ AI L LR R+D K D ++Q
Sbjct: 121 VPPAQPADYSNTKELGRLIYTDYVYAFELAAVILLVAIVAAIALTLRRRKDTKYIDPAQQ 180
Query: 180 LESNPDNSIVMVKVKSGK 197
++ ++ + ++K+ + K
Sbjct: 181 VKVKRNDRLRIIKMPAEK 198
>gi|154253656|ref|YP_001414480.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Parvibaculum
lavamentivorans DS-1]
gi|154157606|gb|ABS64823.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Parvibaculum
lavamentivorans DS-1]
Length = 204
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 125/204 (61%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ ++ FYLF+ + + + F+V++ RNP++SV LI AF NAA LF+LLGAEF+A I ++
Sbjct: 1 MIGTAIAFYLFAGITVAAGFMVISARNPVHSVLFLILAFFNAAALFVLLGAEFIAFILVI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--- 117
VYVGAV V FLF++MMLD+D + IGI+ ++ V +
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFVELREGFLQYLPIGALIGIILLIELLLVLGGWVIAPGAG 120
Query: 118 --EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ ++ +N +G+V+YTQY Y + +G ILL++M+GAIVL LRH+ ++KRQ
Sbjct: 121 SVAASPTPILTDVDNTRALGQVIYTQYVYLFQAAGLILLVAMVGAIVLTLRHKTNVKRQV 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
IS Q+ + + + KV+ G+G+
Sbjct: 181 ISDQVARTRETGVELKKVEPGQGL 204
>gi|218679751|ref|ZP_03527648.1| NADH dehydrogenase subunit J [Rhizobium etli CIAT 894]
Length = 206
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 98/204 (48%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFYLF+F+AI S+F+V+ +NP++SV LI F NAAGLFLL GAEF+AMI LV
Sbjct: 3 MGLQALFFYLFAFVAIASAFMVIWAKNPVHSVLFLILVFFNAAGLFLLAGAEFLAMILLV 62
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IGI+ A ++ V S E
Sbjct: 63 VYVGAVAVLFLFVVMMLDIDFTELRAGVLEYAPIGGLIGIILAAELIVVIGGSVISPEIA 122
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
S + + N +G VLYT Y Y EI+G +LL++MIGAIVL LRHR +IKRQ+
Sbjct: 123 KSVAMPIPALTERTNTAALGDVLYTNYVYFFEIAGLVLLVAMIGAIVLTLRHRTNIKRQN 182
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I +Q+ P ++ +V VK G+G+
Sbjct: 183 IPRQVARTPATAVEVVSVKPGQGV 206
>gi|222085586|ref|YP_002544116.1| NADH-ubiquinone oxidoreductase chain J protein [Agrobacterium
radiobacter K84]
gi|221723034|gb|ACM26190.1| NADH-ubiquinone oxidoreductase chain J protein [Agrobacterium
radiobacter K84]
Length = 204
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 100/204 (49%), Positives = 133/204 (65%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFY+F+F+A+ S+F+V++ RNP++SV LI F NAAGLFLLLGAEF+AMI LV
Sbjct: 1 MGLQALFFYIFAFVAVASAFMVISARNPVHSVLFLILVFFNAAGLFLLLGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IGI+ A ++ V S E
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFSELRAGILEYAPIGALIGIILAAELIVVVGGSVISPEIA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
S + + N +G VLYT Y Y EI+G +LL++MIGAIVL LRHR IKRQ+
Sbjct: 121 RSVAMPIPALTERTNTAALGDVLYTNYVYFFEIAGLVLLVAMIGAIVLTLRHRTHIKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
IS+Q+ P ++ +VKVK G+G+
Sbjct: 181 ISQQVARTPATAVEVVKVKPGQGV 204
>gi|167562186|ref|ZP_02355102.1| NADH dehydrogenase subunit J [Burkholderia oklahomensis EO147]
gi|167569431|ref|ZP_02362305.1| NADH dehydrogenase subunit J [Burkholderia oklahomensis C6786]
Length = 218
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+FS + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MDFTTVLFYIFSLLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILA----AELIVCASNFMVFS 116
VYVGAV+V FLF++MMLDI+++V KR + +G + A ++
Sbjct: 61 VYVGAVMVLFLFVVMMLDINVDVLRRDFKRFVPMATAVGAIIIVETALILWRGYGATASP 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + N + IGKV+YT Y + EI+G +LL+++I A+ L + +D KRQ +
Sbjct: 121 VRDVAAGALAGMPNTKLIGKVIYTDYIFAFEIAGLVLLVAIIAAVALTAQKGKDSKRQRV 180
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
S+Q++ ++ + +VK+++ K
Sbjct: 181 SEQVKVRREDRVRLVKMQADK 201
>gi|209548873|ref|YP_002280790.1| NADH dehydrogenase subunit J [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209534629|gb|ACI54564.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 204
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 98/204 (48%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFYLF+F+A+ S+F+V+ +NP++SV LI F NAAGLFLLLGAEF+AMI LV
Sbjct: 1 MGLQALFFYLFAFVAVASAFMVIWAKNPVHSVLFLILVFFNAAGLFLLLGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IGI+ A ++ V S E
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFTELRAGVLEYAPIGGLIGIILAAELIVVIGGSVISPEIA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
S + + N +G VLYT Y Y EI+G +LL++MIGAIVL LRHR +IKRQ+
Sbjct: 121 KSVAMPIPALSERTNTAALGDVLYTNYVYFFEIAGLVLLVAMIGAIVLTLRHRTNIKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I +Q+ P ++ +V VK G+G+
Sbjct: 181 IPRQVARTPATAVEVVSVKPGQGV 204
>gi|304391411|ref|ZP_07373353.1| NADH-quinone oxidoreductase chain 10 [Ahrensia sp. R2A130]
gi|303295640|gb|EFL89998.1| NADH-quinone oxidoreductase chain 10 [Ahrensia sp. R2A130]
Length = 203
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 131/204 (64%), Gaps = 6/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + +LFFYLF+ + + S+F+V+ RNP++SV LI F NAAGLF+L GAEF+A+I +V
Sbjct: 1 MGVAALFFYLFATICVASAFMVIASRNPVHSVLFLILCFFNAAGLFMLTGAEFLALILIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG- 119
VYVGAV V FLF++MMLD+D + IGI+ A ++ + F E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELRDGFLQYMPIGAVIGIILAVELILVLGGLSFDPEIA 120
Query: 120 ----ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + + +N++ IG +LYT+Y + ++ G ILL++MIGAIVL L HR D++RQ+
Sbjct: 121 ARAVQPIPDLAEVSNIQAIGDLLYTKYIFFFQLCGLILLVAMIGAIVLTLSHRPDVRRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I+ Q+ +P++ + + VK G+GI
Sbjct: 181 IADQVARDPND-VELRSVKPGEGI 203
>gi|13471397|ref|NP_102963.1| NADH dehydrogenase subunit J [Mesorhizobium loti MAFF303099]
gi|14022139|dbj|BAB48749.1| NADH-ubiquinone dehydrogenase chain 10 [Mesorhizobium loti
MAFF303099]
Length = 206
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 87/202 (43%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+++ FFYLF+F+A+ S+F+V++ RNP++SV LI F NAAGLF+L GAEF+AMI LVVY
Sbjct: 5 LEAAFFYLFAFVAVASAFMVISSRNPVHSVLFLILTFFNAAGLFMLTGAEFLAMILLVVY 64
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV+V FLF++MMLD+D + + +G++ A ++ F+ + +
Sbjct: 65 VGAVMVLFLFVVMMLDVDFAEMKEGALQYAPIGALVGLILAAELIIVLGGYTFAPKLAAT 124
Query: 123 -----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N +G +LYT Y Y +ISG ILL++MIGAIVL LRH+ +KRQ I+
Sbjct: 125 VSKPIPDLATRSNTAALGDILYTDYLYYFQISGLILLVAMIGAIVLTLRHKEGVKRQSIA 184
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ P + + KVKSG+G+
Sbjct: 185 AQVGRTPATGMEIRKVKSGEGV 206
>gi|330994063|ref|ZP_08317993.1| NADH-quinone oxidoreductase subunit J [Gluconacetobacter sp.
SXCC-1]
gi|329759009|gb|EGG75523.1| NADH-quinone oxidoreductase subunit J [Gluconacetobacter sp.
SXCC-1]
Length = 257
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 79/202 (39%), Positives = 125/202 (61%), Gaps = 4/202 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + FY+F+ + ++S+ +VV RNP++SV LI AF NAAGLFL+ GAEF+AM ++V
Sbjct: 1 MMTQIVFYVFAAVLVLSATMVVCARNPVHSVLFLILAFFNAAGLFLIAGAEFLAMTLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPR-KKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
YVGAV V FLF++MMLD++ ++ +G G+L EL++ + + S +
Sbjct: 61 YVGAVAVLFLFVVMMLDVNFTRMREGVQRYAPIGGLVGGVLLVELVMAFARWRSASNIDQ 120
Query: 121 LSRLVFKG---NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
++ LV N +G V+YT Y + + +LL++MIGAIVL LR R +RQ+I
Sbjct: 121 IAHLVPSSPTRTNTAALGDVIYTHYIFLFQSCALVLLVAMIGAIVLTLRDRPSGRRQNID 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
+Q + P +S+ M++V G G+
Sbjct: 181 RQHDRVPHDSLEMLQVPLGAGV 202
>gi|260462241|ref|ZP_05810485.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Mesorhizobium
opportunistum WSM2075]
gi|259032101|gb|EEW33368.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Mesorhizobium
opportunistum WSM2075]
Length = 206
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 87/202 (43%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+++ FFYLF+F+A+ S+F+V++ RNP++SV LI F NAAGLF+L GAEF+AMI LVVY
Sbjct: 5 LEAAFFYLFAFVAVASAFMVISSRNPVHSVLFLILTFFNAAGLFMLTGAEFLAMILLVVY 64
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV+V FLF++MMLD+D + + +G++ A ++ F+ + +
Sbjct: 65 VGAVMVLFLFVVMMLDVDFAEMKEGALQYAPIGALVGLILAAELIVVLGGYTFAPQLAST 124
Query: 123 -----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N +G +LYT Y Y +ISG ILL++MIGAIVL LRH+ +KRQ I+
Sbjct: 125 VAKPIPDLAARSNTAALGDILYTDYLYYFQISGLILLVAMIGAIVLTLRHKEGVKRQSIA 184
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ P + + KVKSG+G+
Sbjct: 185 AQVGRTPATGMEIRKVKSGEGV 206
>gi|300311104|ref|YP_003775196.1| transmembrane NADH dehydrogenase I subunit J [Herbaspirillum
seropedicae SmR1]
gi|300073889|gb|ADJ63288.1| transmembrane NADH dehydrogenase I (Chain J) oxidoreductase protein
[Herbaspirillum seropedicae SmR1]
Length = 219
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 120/196 (61%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++ FY+F+ + +I++ V+T RNP+++ L+ +F +AAG+++LL AEF+A++ ++
Sbjct: 1 MEFKTVLFYVFAVILVIAAVRVITARNPVHAALFLVLSFFSAAGIWMLLKAEFLAIVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+++ F + IG++ + ++ E +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINMDKLREGFWGYFPLAATIGVIIVLEMAAVLLRSFWTPETQ 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + +GK+++T+Y Y EI+ ILL++++ A+ L LR R+D K D +K +
Sbjct: 121 VPAASDTLGQTKPLGKLIFTEYVYAFEIAAVILLVAIVAAVALTLRKRKDSKYFDPAKAV 180
Query: 181 ESNPDNSIVMVKVKSG 196
+ + + +V +K+
Sbjct: 181 KVKASDRVRLVSMKAE 196
>gi|115524539|ref|YP_781450.1| NADH dehydrogenase subunit J [Rhodopseudomonas palustris BisA53]
gi|115518486|gb|ABJ06470.1| NADH dehydrogenase (quinone) [Rhodopseudomonas palustris BisA53]
Length = 212
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 84/202 (41%), Positives = 123/202 (60%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + LFFYL+S + S+ +V+ RNP+++V LI F N+AGLF+LLGAEF+AMI ++
Sbjct: 1 MTLPDLFFYLYSAGCVASAVMVIVSRNPVHAVLFLILVFANSAGLFVLLGAEFLAMILVI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--- 117
VYVGAV V FLF+IMMLDID + +G + ++ +
Sbjct: 61 VYVGAVAVLFLFVIMMLDIDFKQLREGFLSHLPVGLLVGAVFLAELLLLAAGWAIRPTVT 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ S + N E +G VLYT Y + +I+G +LL+SMIGAIVL +RHR +KRQDI+
Sbjct: 121 KAITSPIPSGVGNTEALGLVLYTTYIHYFQIAGMVLLVSMIGAIVLTMRHRSSVKRQDIA 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q +P+ ++ + KV SG+G+
Sbjct: 181 AQNARSPETAMAVRKVASGQGL 202
>gi|16126184|ref|NP_420748.1| NADH dehydrogenase subunit J [Caulobacter crescentus CB15]
gi|13423398|gb|AAK23916.1| NADH dehydrogenase I, J subunit [Caulobacter crescentus CB15]
Length = 205
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 87/203 (42%), Positives = 127/203 (62%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q++ FYL +F+ I + LVV+ RNP++SV LI AF +AAGLF+LLGAEF+AM+ +V
Sbjct: 1 MPVQAIAFYLLAFVTIAAGLLVVSARNPVHSVLFLITAFFSAAGLFVLLGAEFLAMLLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + I ++ A +V + +
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELRQGFVQYLPFGGLIALVIAIEMVMVVAAVATNGAAA 120
Query: 121 LSRLVF----KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ L N E IG+VLYT Y + +++G +LL++MIGAIVL LRH+ +KRQDI
Sbjct: 121 KNPLPNASPGGVPNTEAIGRVLYTDYVFFFQLAGLVLLVAMIGAIVLTLRHKPGVKRQDI 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
KQ+ P + +V++K G+GI
Sbjct: 181 GKQVARTPKTGMELVQIKPGEGI 203
>gi|86357248|ref|YP_469140.1| NADH dehydrogenase subunit J [Rhizobium etli CFN 42]
gi|86281350|gb|ABC90413.1| NADH-ubiquinone oxidoreductase chain J protein [Rhizobium etli CFN
42]
Length = 204
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 97/204 (47%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFYLF+F+A+ S+F+V+ +NP++SV LI F NAAGLFLLLGAEF+AMI LV
Sbjct: 1 MGLQALFFYLFAFVAVASAFMVIWAKNPVHSVLFLILVFFNAAGLFLLLGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IGI+ A ++ V S +
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFTELRAGVLEYAPIGGLIGIILAAELIVVIGGSVISPDIA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
S + + N +G VLYT Y Y +I+G +LL++MIGAIVL LRHR +IKRQ+
Sbjct: 121 KSVAMPIPALSERTNTAALGDVLYTNYVYFFQIAGLVLLVAMIGAIVLTLRHRTNIKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
IS+Q+ P ++ +V VK G+G+
Sbjct: 181 ISRQVARTPATAVEVVSVKPGQGV 204
>gi|56478185|ref|YP_159774.1| NADH dehydrogenase I, chain J [Aromatoleum aromaticum EbN1]
gi|56314228|emb|CAI08873.1| NADH dehydrogenase I, chain J [Aromatoleum aromaticum EbN1]
Length = 200
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 60/199 (30%), Positives = 111/199 (55%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + V+T RNP+++ L+ +F +A G++LLL AEF+A++ ++
Sbjct: 1 MDFKTFVFYVLAVIMVFAGLRVITARNPVHAALFLVLSFFSAGGIWLLLAAEFLAVVLVM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+++ IG+L + F E
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDRLRQGFWSYLPVGALIGVLLVVEMALVLGGRYFGLEAM 120
Query: 121 LSRLVFKGN--NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ N +G++LYT Y YP E++ +LL++MI A+ L LR R+ ++ + S+
Sbjct: 121 PEPPAAQAGYSNTRELGRLLYTDYVYPFELASLLLLVAMIVAVTLTLRKRKGVRYLNPSE 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ + + ++ + + K
Sbjct: 181 QISIKRGDRVELISMPAEK 199
>gi|328543696|ref|YP_004303805.1| NADH dehydrogenase I chain J transmembrane protein [polymorphum
gilvum SL003B-26A1]
gi|326413440|gb|ADZ70503.1| Probable NADH dehydrogenase I chain J transmembrane protein
[Polymorphum gilvum SL003B-26A1]
Length = 204
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 136/204 (66%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++++LFFYLF+ + + S+F+V+ RNP++SV LI AFVN+AGLF+LLGAE++AM+ +V
Sbjct: 1 MILKALFFYLFAGVTVASAFMVIASRNPVHSVLFLILAFVNSAGLFVLLGAEYLAMLLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM-----VF 115
VYVGAV V FLF++MMLD+D + +G++ ++ V
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFVELRQGFLQYLPVGALVGVILMVELLLVVGAWAIAPEVI 120
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + + + +NVE IG+VLYT+Y + +++G +LL++M+GAIVL LRH+ +KRQD
Sbjct: 121 AHGSQPIPPLDQMSNVEAIGQVLYTKYVFFFQVAGLVLLVAMVGAIVLTLRHKEGVKRQD 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I Q+ N ++I + KV+SGKGI
Sbjct: 181 IPTQVARNKKSAIEIRKVESGKGI 204
>gi|15965028|ref|NP_385381.1| NADH dehydrogenase subunit J [Sinorhizobium meliloti 1021]
gi|307301100|ref|ZP_07580869.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
meliloti BL225C]
gi|307317834|ref|ZP_07597272.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
meliloti AK83]
gi|15074207|emb|CAC45854.1| Probable NADH dehydrogenase I chain J transmembrane protein
[Sinorhizobium meliloti 1021]
gi|306896596|gb|EFN27344.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
meliloti AK83]
gi|306904055|gb|EFN34641.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
meliloti BL225C]
Length = 204
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 97/204 (47%), Positives = 129/204 (63%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFYLF+F+A+ S+F+V+ RNP+YSV LI F NAAGLFLL GAEF+AMI LV
Sbjct: 1 MGLQALFFYLFAFIAVASAFMVIAARNPVYSVLFLILTFFNAAGLFLLTGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IG++ A ++ FS E
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFTELRAGVLEYAPIGALIGLILAAELIVVVGGSAFSPEIA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ N +G VLYT Y Y +I+G +LL++MIGAIVL LRHR++IKRQ
Sbjct: 121 KGIAMPIPAPSERTNTAALGDVLYTHYVYFFQIAGLVLLVAMIGAIVLTLRHRQNIKRQS 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I +Q+ P+ ++ +V VK G+GI
Sbjct: 181 IPQQVARTPETAVEVVTVKPGQGI 204
>gi|116251476|ref|YP_767314.1| NADH dehydrogenase subunit J [Rhizobium leguminosarum bv. viciae
3841]
gi|115256124|emb|CAK07205.1| putative NADH-quinone oxidoreductase subunit 10 [Rhizobium
leguminosarum bv. viciae 3841]
Length = 204
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 95/204 (46%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFYLF+F+A+ S+F+V+ +NP++SV LI F NAAGLFLLLGAEF+AMI LV
Sbjct: 1 MGLQALFFYLFAFVAVASAFMVIWAKNPVHSVLFLILVFFNAAGLFLLLGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IG++ A ++ V S E
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFTELRAGVLEYAPIGGLIGVILAAELIVVIGGSVISPEIA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + + N +G VLYT Y Y +I+G +LL++MIGAIVL LRHR +IKRQ+
Sbjct: 121 KTVAMPIPALSERTNTAALGDVLYTNYVYFFQIAGLVLLVAMIGAIVLTLRHRTNIKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I +Q+ P ++ +V VK G+G+
Sbjct: 181 IPRQVARTPATAVEVVSVKPGQGV 204
>gi|75676069|ref|YP_318490.1| NADH dehydrogenase subunit J [Nitrobacter winogradskyi Nb-255]
gi|74420939|gb|ABA05138.1| NADH dehydrogenase subunit J [Nitrobacter winogradskyi Nb-255]
Length = 212
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 84/202 (41%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++ +LFFYLF+ + + S+ +V++ RNP++SV LI AFVNAAGLF+L+GAEF+AMI +V
Sbjct: 1 MILPALFFYLFAGVCVASAAMVISSRNPVHSVLFLILAFVNAAGLFILMGAEFLAMILIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--- 117
VYVGAV V FLF+IMMLD+D I + ++ +
Sbjct: 61 VYVGAVAVLFLFVIMMLDVDFAELREGFLEYLPFGLVIAAIFLLELLLVVGGWTLNPAVT 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + + +N E +G VLYT+Y + +++G +LL++MIGAIVL LRHR +KRQDI+
Sbjct: 121 KSITAAIPGDVSNTEALGLVLYTKYIHYFQLAGMVLLVAMIGAIVLTLRHRAGVKRQDIN 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q P+ ++ + +V SG+G+
Sbjct: 181 VQNARTPEMAMSVRQVASGQGL 202
>gi|91782621|ref|YP_557827.1| NADH dehydrogenase subunit J [Burkholderia xenovorans LB400]
gi|296160638|ref|ZP_06843453.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
sp. Ch1-1]
gi|91686575|gb|ABE29775.1| NADH dehydrogenase subunit J [Burkholderia xenovorans LB400]
gi|295889164|gb|EFG68967.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
sp. Ch1-1]
Length = 229
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 119/203 (58%), Gaps = 6/203 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVSSALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN------FMV 114
VYVGAV+V FLF++MMLDI+I+V KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDVLRKDFKRFVPMATLVGAIIVIETALILWHGYGATATA 120
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + +N IGK++YT Y + E++G +LL+++I AI L H++D KRQ
Sbjct: 121 LRDTTAAANGMGDWSNTRLIGKIIYTDYIFAFEVAGLVLLVAIIAAIALTTSHKKDSKRQ 180
Query: 175 DISKQLESNPDNSIVMVKVKSGK 197
++S+Q++ + + +VK+KS K
Sbjct: 181 NVSEQVKVRAQDRVRVVKMKSEK 203
>gi|126736050|ref|ZP_01751794.1| NADH dehydrogenase (quinone) [Roseobacter sp. CCS2]
gi|126714607|gb|EBA11474.1| NADH dehydrogenase (quinone) [Roseobacter sp. CCS2]
Length = 201
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 122/201 (60%), Gaps = 2/201 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FYLF+ + + V RNP++SV LI AF+++AGLF+ LGAEFVAM+ ++
Sbjct: 1 MTVFAFTFYLFAVTTVTGGLMTVVSRNPVHSVLWLILAFLSSAGLFVTLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--E 118
VYVGAV V FLF++MMLD+D + + IG++ + A F+ E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELKAEMTKYLPLGLLIGVVILMQLALAFGVWGFADGVE 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G ++ +N +G ++Y +Y ++SG ILL++MIGAIVL LRHR DIKRQ++
Sbjct: 121 GRIAAPTGDLDNTRALGLLIYDKYILLFQLSGLILLVAMIGAIVLTLRHRVDIKRQNVLA 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ +P ++ + VK G+G+
Sbjct: 181 QMYRDPAKAMELKDVKPGQGL 201
>gi|254459906|ref|ZP_05073322.1| NADH-quinone oxidoreductase chain j [Rhodobacterales bacterium
HTCC2083]
gi|206676495|gb|EDZ40982.1| NADH-quinone oxidoreductase chain j [Rhodobacteraceae bacterium
HTCC2083]
Length = 202
Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats.
Identities = 81/202 (40%), Positives = 118/202 (58%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FYLF+ V RNP++SV LI AF+++AGLF+LLGAEFVAM+ ++
Sbjct: 1 MSVAVFTFYLFAICTFTGGLFTVISRNPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID + + + IG++ A S +
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFAELKAEMVKYMPLALLIGLVLLMQFTMAFGVWEASDQAA 120
Query: 121 ---LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N E +G +LY +Y ++SG ILL++MIGAIVL LRHR D+KRQD+
Sbjct: 121 GLRGAVTPTDAHNTEALGLLLYDKYFLIFQLSGMILLVAMIGAIVLTLRHRTDVKRQDVM 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ +P ++ + VK G+G+
Sbjct: 181 AQMHRDPAKAMELKDVKPGQGL 202
>gi|254450873|ref|ZP_05064310.1| NADH dehydrogenase i, j subunit [Octadecabacter antarcticus 238]
gi|198265279|gb|EDY89549.1| NADH dehydrogenase i, j subunit [Octadecabacter antarcticus 238]
Length = 197
Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 118/196 (60%), Gaps = 2/196 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ FY F+ I + V RNP++SV LI AF+++AGLF+LLGAEFVAM+ ++VYVGA
Sbjct: 2 IAFYAFAVTTIGGGLMTVLARNPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLIIVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL--SR 123
V V FLF++MMLD+D + R + IG++ + A +S E +
Sbjct: 62 VAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGVVLLMQLALAFGVWDYSDGFETRLVQ 121
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
+ N + +G VLY Y ++SG ILL++MIGAIVL LRHR D+KRQ++ Q+ +
Sbjct: 122 PIMDVENTKQLGLVLYDDYFLIFQLSGLILLVAMIGAIVLTLRHRTDVKRQNVMVQMSRD 181
Query: 184 PDNSIVMVKVKSGKGI 199
P + + VK G+G+
Sbjct: 182 PAKQMELKDVKPGQGL 197
>gi|189184496|ref|YP_001938281.1| NADH dehydrogenase subunit J [Orientia tsutsugamushi str. Ikeda]
gi|189181267|dbj|BAG41047.1| NADH dehydrogenase I chain J [Orientia tsutsugamushi str. Ikeda]
Length = 202
Score = 144 bits (362), Expect = 8e-33, Method: Composition-based stats.
Identities = 84/195 (43%), Positives = 124/195 (63%), Gaps = 1/195 (0%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
LFFYLFS +A++ S V+T +NP+Y+V LIF F N +GL +LLGAEF+A + ++VY GA
Sbjct: 2 LFFYLFSVLALLGSIGVITSKNPVYAVLWLIFVFCNTSGLLILLGAEFLAFLLVIVYAGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V + FLF++MML+I + K R L I++ I+ S +V
Sbjct: 62 VAILFLFVVMMLNIKSDNLVLVKTRTILNIPIYVIISFIFIIDLSIIIVMGFGNYCPIHY 121
Query: 126 FKGN-NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
+ N +++ IG+VLYT+YA P ++SG ILL++MIG +VL +R R +KRQD Q+ N
Sbjct: 122 EENNLDIKAIGRVLYTEYALPFQLSGIILLIAMIGCVVLTVRKRSGVKRQDHYSQINRNR 181
Query: 185 DNSIVMVKVKSGKGI 199
++SI +VKV+ KGI
Sbjct: 182 NSSIQVVKVEVNKGI 196
>gi|241204097|ref|YP_002975193.1| NADH dehydrogenase subunit J [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857987|gb|ACS55654.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 204
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 96/204 (47%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFYLF+F+A+ S+F+V+ +NP++SV LI F NAAGLFLLLGAEF+AMI LV
Sbjct: 1 MGLQALFFYLFAFVAVASAFMVIWAKNPVHSVLFLILVFFNAAGLFLLLGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IG++ A ++ V S E
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFTELRAGVLEYAPIGGLIGVILAAELIVVIGGSVISPEIA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
S + + N +G VLYT Y Y +I+G +LL++MIGAIVL LRHR +IKRQ+
Sbjct: 121 KSVAMPIPALSERTNTAALGDVLYTNYVYFFQIAGLVLLVAMIGAIVLTLRHRTNIKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I +Q+ P ++ +V VK G+G+
Sbjct: 181 IPRQVARTPATAVKVVSVKPGQGV 204
>gi|114771828|ref|ZP_01449221.1| NADH dehydrogenase subunit J [alpha proteobacterium HTCC2255]
gi|114547644|gb|EAU50535.1| NADH dehydrogenase subunit J [alpha proteobacterium HTCC2255]
Length = 204
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 126/204 (61%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FYLFS A++S+ VV RNP++SV LI F +AA +F+L+GAEFVAM+ +
Sbjct: 1 MTITLFAFYLFSITAVMSALFVVVARNPVHSVLWLILTFFSAASMFVLMGAEFVAMLLAI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG- 119
VYVGAV V FLF++MMLD+D + ++ FL IG++ + + + E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFVELKSGMQKYFLIGSSIGLVLLMELGLVISHWKVAPEAG 120
Query: 120 ----ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + +N +G++LY+ Y Y +I+G ILL +MIGAIVL LRHR D+KRQ
Sbjct: 121 SLLQSPTPPIDTTHNTLALGQILYSDYIYLFQIAGLILLTAMIGAIVLTLRHRTDVKRQS 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
+ Q++ +P +++ ++ VK G+G+
Sbjct: 181 VVDQMQRDPADAMEVITVKPGQGL 204
>gi|134283969|ref|ZP_01770665.1| NADH dehydrogenase I, J subunit [Burkholderia pseudomallei 305]
gi|167893554|ref|ZP_02480956.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 7894]
gi|167902000|ref|ZP_02489205.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei NCTC 13177]
gi|167918269|ref|ZP_02505360.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei BCC215]
gi|217420305|ref|ZP_03451811.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 576]
gi|237811591|ref|YP_002896042.1| NADH dehydrogenase subunit j [Burkholderia pseudomallei MSHR346]
gi|254181178|ref|ZP_04887775.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
1655]
gi|134244758|gb|EBA44856.1| NADH dehydrogenase I, J subunit [Burkholderia pseudomallei 305]
gi|184211716|gb|EDU08759.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
1655]
gi|217397609|gb|EEC37625.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 576]
gi|237502691|gb|ACQ95009.1| NADH dehydrogenase subunit j [Burkholderia pseudomallei MSHR346]
Length = 218
Score = 144 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+FS + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MDFTTVLFYIFSLLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILA----AELIVCASNFMVFS 116
VYVGAV+V FLF++MMLD++I+V KR + +G + A ++
Sbjct: 61 VYVGAVMVLFLFVVMMLDVNIDVLRRDFKRFVPMATAVGAIIVVETALILWRGYGATASP 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + N + IGKV+YT Y + EI+G +LL+++I A+ L + +D KRQ +
Sbjct: 121 VRDMAAGALAGMPNTKLIGKVIYTDYIFAFEIAGLVLLVAIIAAVALTAQKGKDSKRQRV 180
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
S+Q++ ++ + +VK+ + K
Sbjct: 181 SEQVKVRREDRVRLVKMPAEK 201
>gi|114151611|ref|YP_740454.1| NADH dehydrogenase subunit 6 [Zea luxurians]
gi|110287607|gb|ABG65653.1| NADH dehydrogenase subunit 6 [Zea luxurians]
Length = 375
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLGLDFSAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL----- 124
FLF++MM +I I R S IG++ + +
Sbjct: 65 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLKY 124
Query: 125 ------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
V N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLE 181
+
Sbjct: 185 RNA 187
>gi|259418750|ref|ZP_05742667.1| NADH-quinone oxidoreductase subunit j [Silicibacter sp. TrichCH4B]
gi|259344972|gb|EEW56826.1| NADH-quinone oxidoreductase subunit j [Silicibacter sp. TrichCH4B]
Length = 198
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 79/197 (40%), Positives = 120/197 (60%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
FYLF+ AI V R P++SV LI AF+++AGLF+LLGAEFVAM+ ++VYVGA
Sbjct: 2 FAFYLFAISAITGGLFTVISRQPVHSVLWLILAFISSAGLFVLLGAEFVAMLLVIVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V V FLF++MMLD+D + R + IG++ V A + + +
Sbjct: 62 VAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLVILMQFVIAYGSWESAHDVAQNLSQ 121
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N E +G ++Y QY +++G ILL++MIGAIVL LRHR+D+KRQD+ Q+
Sbjct: 122 PIPVDRHNTEALGLIIYDQYFLLFQLAGLILLVAMIGAIVLTLRHRQDVKRQDVLAQMYR 181
Query: 183 NPDNSIVMVKVKSGKGI 199
+P ++ + +K G+G+
Sbjct: 182 DPAKAMELKDIKPGQGL 198
>gi|148285164|ref|YP_001249254.1| NADH dehydrogenase subunit J [Orientia tsutsugamushi str. Boryong]
gi|146740603|emb|CAM81257.1| NADH dehydrogenase I chain J [Orientia tsutsugamushi str. Boryong]
Length = 202
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 83/195 (42%), Positives = 122/195 (62%), Gaps = 1/195 (0%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
LFFYLFS +A++ S V+T +NP+Y+ LIF F N +GL +LLGAEF+A + ++VY GA
Sbjct: 2 LFFYLFSVLALLGSIGVITSKNPVYAALWLIFVFCNTSGLLILLGAEFLAFLLVIVYAGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V + FLF++MML+I + K R L I+A I+ S +V
Sbjct: 62 VAILFLFVVMMLNIKSDNLVLVKTRTILNIPIYVIIAFIFIIDLSIIIVMCFSNYCPIHY 121
Query: 126 FKGN-NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
+ N +++ IG+VLYT+YA ++SG ILL++MIG +VL +R R +KRQD Q+ N
Sbjct: 122 EENNLDIKAIGRVLYTEYALQFQLSGIILLIAMIGCVVLTVRKRSGVKRQDHYSQINRNR 181
Query: 185 DNSIVMVKVKSGKGI 199
++SI +VKV+ KGI
Sbjct: 182 NSSIQVVKVEVNKGI 196
>gi|217970165|ref|YP_002355399.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thauera sp.
MZ1T]
gi|217507492|gb|ACK54503.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thauera sp.
MZ1T]
Length = 201
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 66/199 (33%), Positives = 113/199 (56%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY + + ++++ V+T RNP+++ L+ F NA GL+LLL AEF+A+ ++
Sbjct: 1 MEFKTFVFYFLAAIMVLAALRVITARNPVHAALFLVLTFFNAGGLWLLLQAEFLAVTLVM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF--SAE 118
VYVGAV+V FLF++MMLDI+++ +GIL +V F A
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDRLREGFWSYLPVGALVGILMLVEMVMVLGGSYFGLEAM 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + +N +G+VLYT Y Y E++ +LL++M+ A+ L LR R+ +K S+
Sbjct: 121 PAPAPVAADYSNTRELGRVLYTDYVYAFELASLVLLVAMVSAVALTLRKRKGLKSIPPSE 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ + + +VK++S K
Sbjct: 181 QVAVRREGRVELVKMQSEK 199
>gi|256821524|ref|YP_003145487.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Kangiella
koreensis DSM 16069]
gi|256795063|gb|ACV25719.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Kangiella
koreensis DSM 16069]
Length = 226
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 112/196 (57%), Gaps = 2/196 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY+F+ + I+S+ VVTVRN + +V L+ F +AA L++LL AEF+A+ ++
Sbjct: 1 MTAEQIVFYIFATLTIVSALGVVTVRNSVQAVLCLVLTFFSAAVLWMLLEAEFLAIALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLD+D R + I + VF E
Sbjct: 61 VYVGAVMVLFLFVVMMLDVDFASLNQGFTRYVPLGILVAIGLLIGLYWVLRGEVFGLEAM 120
Query: 121 LSRL--VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + +NVE +G++LYT Y Y EI+G ILL++++ AI L R RR+ + Q +
Sbjct: 121 PEPVKHGAEHSNVEVLGRLLYTDYFYAFEIAGVILLVAIVAAISLTFRGRRERRGQSVPS 180
Query: 179 QLESNPDNSIVMVKVK 194
Q ++ D + +VK+
Sbjct: 181 QHRASKDERLHIVKMD 196
>gi|121604339|ref|YP_981668.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Polaromonas
naphthalenivorans CJ2]
gi|120593308|gb|ABM36747.1| NADH dehydrogenase subunit J [Polaromonas naphthalenivorans CJ2]
Length = 215
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 73/200 (36%), Positives = 122/200 (61%), Gaps = 5/200 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + + ++F V+T RNP+++ L+ AF AA +++LL AEF+A+ ++
Sbjct: 1 MDAKTGLFYVFAAVLLFAAFRVITARNPVHAALFLVLAFFQAAAVWILLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI--VCASNFMVFSAE 118
VYVGAV+V FLF++MMLDI+++ + F + +G + A + V F
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDSVRKGFWKHFPLAGTVGAIIALEMSYVLMGGFREPPQG 120
Query: 119 GELS---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ L + +N + +GKVLY+QY YPLEI+ ILL+++I AI L LR R+D KR +
Sbjct: 121 ASMPVSGELAAQVSNTKELGKVLYSQYIYPLEIAAVILLVAIIAAIALTLRERKDSKRTN 180
Query: 176 ISKQLESNPDNSIVMVKVKS 195
+ Q+ + + +VK+KS
Sbjct: 181 PADQVRVKSQDRVRLVKMKS 200
>gi|260574772|ref|ZP_05842775.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Rhodobacter
sp. SW2]
gi|259023189|gb|EEW26482.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Rhodobacter
sp. SW2]
Length = 204
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 122/204 (59%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FYLF+F+ + S+ LV RNP++SV LI AF++ AGLF+LLGAEFVAM+ ++
Sbjct: 1 MNVADYAFYLFAFVTLTSALLVTVSRNPVHSVLWLILAFISTAGLFVLLGAEFVAMLLMI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAE-----LIVCASNFMVF 115
VYVGAV V FLF++MMLDID + R G++ L V
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFAALRGKMTRYLPIGLAFGVVLLLEFSMALFVWVQADGAV 120
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ ++ + N +G ++Y +Y Y + +G ILL++MIGAI+L LRHR+DIKRQ+
Sbjct: 121 AMRQAVAPDPGQVENTRALGLLIYDKYIYLFQAAGLILLVAMIGAILLTLRHRKDIKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
+ Q+ +P ++ + +K G+G+
Sbjct: 181 VLHQMWRDPAKTMEIKDIKPGQGL 204
>gi|53718856|ref|YP_107842.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei K96243]
gi|53725806|ref|YP_103425.1| NADH dehydrogenase subunit J [Burkholderia mallei ATCC 23344]
gi|67642183|ref|ZP_00440943.1| NADH dehydrogenase subunit J [Burkholderia mallei GB8 horse 4]
gi|76809961|ref|YP_332853.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 1710b]
gi|121601517|ref|YP_992478.1| NADH dehydrogenase subunit J [Burkholderia mallei SAVP1]
gi|124383891|ref|YP_001026719.1| NADH dehydrogenase subunit J [Burkholderia mallei NCTC 10229]
gi|126440562|ref|YP_001058347.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 668]
gi|126449514|ref|YP_001079996.1| NADH dehydrogenase subunit J [Burkholderia mallei NCTC 10247]
gi|126453874|ref|YP_001065586.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 1106a]
gi|167000359|ref|ZP_02266177.1| NADH dehydrogenase subunit J [Burkholderia mallei PRL-20]
gi|167718854|ref|ZP_02402090.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei DM98]
gi|167737862|ref|ZP_02410636.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 14]
gi|167815045|ref|ZP_02446725.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 91]
gi|167823461|ref|ZP_02454932.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 9]
gi|167845013|ref|ZP_02470521.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei B7210]
gi|167910236|ref|ZP_02497327.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 112]
gi|226195411|ref|ZP_03791000.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei Pakistan 9]
gi|242315732|ref|ZP_04814748.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 1106b]
gi|254175409|ref|ZP_04882069.1| NADH dehydrogenase I, J subunit [Burkholderia mallei ATCC 10399]
gi|254190541|ref|ZP_04897048.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
Pasteur 52237]
gi|254194999|ref|ZP_04901428.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
S13]
gi|254202101|ref|ZP_04908464.1| NADH dehydrogenase I, J subunit [Burkholderia mallei FMH]
gi|254207431|ref|ZP_04913781.1| NADH dehydrogenase I, J subunit [Burkholderia mallei JHU]
gi|254258350|ref|ZP_04949404.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
1710a]
gi|254298542|ref|ZP_04965994.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
406e]
gi|254359853|ref|ZP_04976123.1| NADH dehydrogenase I, J subunit [Burkholderia mallei 2002721280]
gi|52209270|emb|CAH35215.1| NADH dehydrogenase I chain J [Burkholderia pseudomallei K96243]
gi|52429229|gb|AAU49822.1| NADH dehydrogenase I, J subunit [Burkholderia mallei ATCC 23344]
gi|76579414|gb|ABA48889.1| NADH dehydrogenase I chain J [Burkholderia pseudomallei 1710b]
gi|121230327|gb|ABM52845.1| NADH dehydrogenase I, J subunit [Burkholderia mallei SAVP1]
gi|124291911|gb|ABN01180.1| NADH dehydrogenase I, J subunit [Burkholderia mallei NCTC 10229]
gi|126220055|gb|ABN83561.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
668]
gi|126227516|gb|ABN91056.1| NADH dehydrogenase I, J subunit [Burkholderia pseudomallei 1106a]
gi|126242384|gb|ABO05477.1| NADH dehydrogenase I, J subunit [Burkholderia mallei NCTC 10247]
gi|147746348|gb|EDK53425.1| NADH dehydrogenase I, J subunit [Burkholderia mallei FMH]
gi|147751325|gb|EDK58392.1| NADH dehydrogenase I, J subunit [Burkholderia mallei JHU]
gi|148029093|gb|EDK86998.1| NADH dehydrogenase I, J subunit [Burkholderia mallei 2002721280]
gi|157808368|gb|EDO85538.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
406e]
gi|157938216|gb|EDO93886.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
Pasteur 52237]
gi|160696453|gb|EDP86423.1| NADH dehydrogenase I, J subunit [Burkholderia mallei ATCC 10399]
gi|169651747|gb|EDS84440.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
S13]
gi|225932613|gb|EEH28611.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei Pakistan 9]
gi|238523279|gb|EEP86718.1| NADH dehydrogenase subunit J [Burkholderia mallei GB8 horse 4]
gi|242138971|gb|EES25373.1| NADH dehydrogenase subunit J [Burkholderia pseudomallei 1106b]
gi|243063693|gb|EES45879.1| NADH dehydrogenase subunit J [Burkholderia mallei PRL-20]
gi|254217039|gb|EET06423.1| NADH-quinone oxidoreductase, J subunit [Burkholderia pseudomallei
1710a]
Length = 218
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 120/201 (59%), Gaps = 4/201 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+FS + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MDFTTVLFYIFSLLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILA----AELIVCASNFMVFS 116
VYVGAV+V FLF++MMLD++I+V KR + +G + A ++
Sbjct: 61 VYVGAVMVLFLFVVMMLDVNIDVLRRDFKRFVPMATAVGAIIVVETALILWRGYGATASP 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + N + IGKV+YT Y + EI+G +LL+++I A+ L + +D KRQ +
Sbjct: 121 VRDMAAGALAGMPNTKLIGKVIYTDYIFAFEIAGLVLLVAIIAAVALTAQKGKDSKRQRV 180
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
S+Q++ ++ + +VK+ + K
Sbjct: 181 SEQVKVRREDRVRLVKMPADK 201
>gi|27380019|ref|NP_771548.1| NADH dehydrogenase subunit J [Bradyrhizobium japonicum USDA 110]
gi|27353173|dbj|BAC50173.1| NADH ubiquinone oxidoreductase chain J [Bradyrhizobium japonicum
USDA 110]
Length = 212
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++ +LFFYLF+ + + S+ +V+ RNP++SV LI AFVNA+GLF+L+GAEF+ M+ +V
Sbjct: 1 MILPALFFYLFAGVCVASAVMVIVSRNPVHSVLYLILAFVNASGLFVLMGAEFLGMMLIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--- 117
VYVGAV V FLF+IMMLD+D IG + ++ F V +
Sbjct: 61 VYVGAVAVLFLFVIMMLDVDFLELREGFIEYLPVGLVIGGIFLFELLLTVGFWVINPGVS 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + + +N E +G VLYT+Y Y +++G +LL++MIGAIVL LRH+ +KRQDI+
Sbjct: 121 KTITAAIPTNVSNTEALGLVLYTKYVYYFQLAGMVLLVAMIGAIVLTLRHKVSVKRQDIN 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q PD ++ M KV G+G+
Sbjct: 181 VQNARTPDMAMAMRKVAPGQGL 202
>gi|190891296|ref|YP_001977838.1| NADH-ubiquinone oxidoreductase, chain J [Rhizobium etli CIAT 652]
gi|190696575|gb|ACE90660.1| NADH-ubiquinone oxidoreductase protein, chain J [Rhizobium etli
CIAT 652]
Length = 204
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 96/204 (47%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+LFFYLF+F+AI S+F+V+ +NP++SV LI F NAAGLFLL GAEF+AMI LV
Sbjct: 1 MGLQALFFYLFAFVAIASAFMVIWAKNPVHSVLFLILVFFNAAGLFLLAGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IGI+ A ++ V S E
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFTELRAGVLEYAPIGGLIGIILAAELIVVIGGSVISPEIA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + + N +G VLYT Y Y +I+G +LL++MIGAIVL LRHR +IKRQ+
Sbjct: 121 KTVAMPIPALTERTNTAALGDVLYTNYVYFFQIAGLVLLVAMIGAIVLTLRHRTNIKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I +Q+ P ++ +V VK G+G+
Sbjct: 181 IPRQVARTPATAVEVVSVKPGQGV 204
>gi|299066342|emb|CBJ37526.1| NADH-quinone oxidoreductase subunit J [Ralstonia solanacearum
CMR15]
Length = 210
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 62/196 (31%), Positives = 113/196 (57%), Gaps = 2/196 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FY FS + ++S+ V+T +NP+++ L+ +F AA +++LL AEF+A+ ++
Sbjct: 1 MEITTIIFYCFSLVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN--FMVFSAE 118
VYVGAV+V FLF++MM+D+DIE F+G + + FM S
Sbjct: 61 VYVGAVMVLFLFVVMMIDVDIEHLRRDFWTYVPMGAFVGAVIIMEMAVVLTKAFMGRSQP 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ G N + +GK++YT Y Y E++G +LLL+++ A+ L R R+D K Q+++
Sbjct: 121 VQELPKALSGPNTQALGKLIYTDYIYAFEVAGAVLLLAIVAAVALTARRRKDSKAQNVAD 180
Query: 179 QLESNPDNSIVMVKVK 194
Q+ + + ++ +
Sbjct: 181 QVRVQRKDRVRLISMP 196
>gi|149202656|ref|ZP_01879628.1| NADH dehydrogenase subunit J [Roseovarius sp. TM1035]
gi|149143938|gb|EDM31972.1| NADH dehydrogenase subunit J [Roseovarius sp. TM1035]
Length = 202
Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 82/202 (40%), Positives = 121/202 (59%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FYLF+ + + V RNP++SV LI +F++AAGLF+LLGAEFVAM+ ++
Sbjct: 1 MTFAAMAFYLFAVSLLTGGLMTVISRNPVHSVLWLILSFISAAGLFVLLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + + + IG++ A + E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELKAEMAKYMPLALLIGVILLMQFGLAFGNWEMADGAE 120
Query: 121 LSRLVFKGNNVEN---IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+R VEN +G +LY Y ++SG ILL++MIGAIVL LRHR D+KRQD+
Sbjct: 121 AARRAVTPEGVENTAALGLLLYDTYFILFQLSGLILLVAMIGAIVLTLRHRTDVKRQDVL 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ +P ++ + VK G+G+
Sbjct: 181 AQMYRDPAKAMELRDVKPGQGL 202
>gi|254467844|ref|ZP_05081250.1| NADH-ubiquinone oxidoreductase chain 6 [beta proteobacterium KB13]
gi|207086654|gb|EDZ63937.1| NADH-ubiquinone oxidoreductase chain 6 [beta proteobacterium KB13]
Length = 198
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 76/197 (38%), Positives = 120/197 (60%), Gaps = 1/197 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ FYLFS + +++S V+T NP+YS SL+ AF +AAG++LLL AEF+A+ ++
Sbjct: 1 MIFTDYLFYLFSGILVLASLRVITANNPVYSALSLVLAFFSAAGIWLLLHAEFLAIALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+IE R F + I +L I F + +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIEALRQRFWSYFPVALLIALLFIFEIYLVVTDKFF-SSSD 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + + +N +IG VLYT Y P +++ ILL+++I AIVL + ++ K D Q+
Sbjct: 120 PAGIPLEKSNTHSIGSVLYTDYLLPFQVAAVILLVAIISAIVLTMYGKKSHKAIDPKDQI 179
Query: 181 ESNPDNSIVMVKVKSGK 197
+ N ++ + +VK+KS K
Sbjct: 180 KVNRNDRVRVVKMKSEK 196
>gi|170696390|ref|ZP_02887519.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
graminis C4D1M]
gi|170138718|gb|EDT06917.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
graminis C4D1M]
Length = 228
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 117/203 (57%), Gaps = 6/203 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVSSALFLVLAFFNAAAIWMLLQAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN------FMV 114
VYVGAV+V FLF++MMLDI+++V +R + +G + V
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDVLRKDFRRFVPMATVVGAIIVLETALILWHGYGATSTV 120
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + +N IGKV+YT Y + E++G +LL+++I AI L H++D KRQ
Sbjct: 121 VPDTTAAAGGMGDWSNTRLIGKVIYTDYIFAFEVAGLVLLVAIIAAIALTTSHKKDSKRQ 180
Query: 175 DISKQLESNPDNSIVMVKVKSGK 197
IS Q++ + + +VK+ S K
Sbjct: 181 KISDQVKVRAQDRVRVVKMPSEK 203
>gi|254419970|ref|ZP_05033694.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Brevundimonas sp. BAL3]
gi|196186147|gb|EDX81123.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Brevundimonas sp. BAL3]
Length = 208
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 83/202 (41%), Positives = 124/202 (61%), Gaps = 4/202 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q + FYL + A++S LVVT RNP++SV LI AF +AAGLF+LLGAEF+AM+ +VV
Sbjct: 1 MLQGIAFYLLAATAVVSGLLVVTARNPVHSVLWLILAFFSAAGLFVLLGAEFLAMLLVVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE- 120
YVGAV V FLF++MMLD+D R I + ++ S+ ++
Sbjct: 61 YVGAVAVLFLFVVMMLDVDFLKLREGYARYLPIGAVIAAVLLAEMILVSSAVIQGGATAG 120
Query: 121 ---LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+NVE IG+VLYT Y Y + +G +LL++MIGAI L LRH+ IKRQ+I+
Sbjct: 121 LAGPGAPDPDMSNVEAIGRVLYTDYIYFFQAAGIVLLIAMIGAITLTLRHKPHIKRQNIT 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ + ++ + V++G+G+
Sbjct: 181 DQVNRSAAKAMEVKSVQTGQGV 202
>gi|103486786|ref|YP_616347.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Sphingopyxis
alaskensis RB2256]
gi|98976863|gb|ABF53014.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Sphingopyxis
alaskensis RB2256]
Length = 203
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 124/201 (61%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q + FYLF+ + I S+ +V+ RNP++SV LI AF NAAGL LL GAEF+AM+ ++V
Sbjct: 1 MIQLIAFYLFATIVIASAAMVIFARNPVHSVMWLILAFFNAAGLMLLAGAEFIAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF---SAE 118
YVGAV V FLF++MMLDID R + I+ A ++ A
Sbjct: 61 YVGAVAVLFLFVVMMLDIDFAELRAGFVRYLPLGALVAIILAAELIFAVGAWSAGGVDLA 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ +V +N++ IG++LYT+Y + E +G +LL++MIGAIVL R R ++ Q+IS+
Sbjct: 121 ARTAPVVSDKSNIQQIGELLYTKYIFLFEAAGIVLLVAMIGAIVLTHRQRGGVRAQNISQ 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ P+++ +V +G+G+
Sbjct: 181 QVRRRPEDATRLVDPGTGQGV 201
>gi|262277292|ref|ZP_06055085.1| NADH-quinone oxidoreductase, j subunit [alpha proteobacterium
HIMB114]
gi|262224395|gb|EEY74854.1| NADH-quinone oxidoreductase, j subunit [alpha proteobacterium
HIMB114]
Length = 206
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 127/202 (62%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ +L FYLFSF+AI SS V++ +N +++VF LI FV+ + LF+++GAE++ M+TL+
Sbjct: 1 MLAHALVFYLFSFIAISSSLAVISSKNTVHAVFFLILDFVSISCLFIMMGAEYLGMLTLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MML+++ + IGI+ + +
Sbjct: 61 VYVGAVAVLFLFVVMMLNVNFKDLRTGFLSYLPFGLLIGIVIIIELGMMIGTWKYKDSFI 120
Query: 121 LS---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ ++ K +N E +G VLYT + + +ISG ILL++MIGAI+L R + ++KRQDI+
Sbjct: 121 KTSEIQISSKVSNTEALGNVLYTDFIHYFQISGIILLVAMIGAILLTFRQKENLKRQDIT 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
KQ+ D+ +++ +V+S KG+
Sbjct: 181 KQVSRERDDGVLLEEVESFKGV 202
>gi|254466369|ref|ZP_05079780.1| NADH dehydrogenase i, j subunit [Rhodobacterales bacterium Y4I]
gi|206687277|gb|EDZ47759.1| NADH dehydrogenase i, j subunit [Rhodobacterales bacterium Y4I]
Length = 200
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 80/200 (40%), Positives = 119/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ I V R P++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MSVFAFYLFAISTITGGLFTVISRQPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL- 121
VGAV V FLF++MMLD+D + R + IG++ V A + +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLVILMQFVMAFGVWETAHQAPEL 120
Query: 122 --SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ + +N E +G ++Y QY +++G ILL++MIGAIVL LRHR D+KRQD+ Q
Sbjct: 121 LANPVPADRHNTEALGLIIYDQYFLLFQLAGLILLVAMIGAIVLTLRHRTDVKRQDVVAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MMRDPAKAMELRDVKPGQGL 200
>gi|121998535|ref|YP_001003322.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Halorhodospira halophila SL1]
gi|121589940|gb|ABM62520.1| NADH dehydrogenase subunit J [Halorhodospira halophila SL1]
Length = 203
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 120/194 (61%), Gaps = 1/194 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + FY+F+ + + ++ +V++VRNP+++ L+ AF NAA +++L GAEF+ + ++VY
Sbjct: 1 MEQVIFYIFAGVLLFAATMVISVRNPVHAALFLVLAFFNAAVIWVLAGAEFLGIALVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL-AAELIVCASNFMVFSAEGEL 121
VGAV+V FLF++MMLDI+I R + +L AA+L+ + G +
Sbjct: 61 VGAVMVLFLFVLMMLDINIAPMREGFTRYLPVGALVAVLMAAQLVAVIVSERADLISGTI 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NN++ IG VLYT Y YP EI+ ILLL+++ AI L LR R +QD+S+QL
Sbjct: 121 PEPAADVNNIQAIGGVLYTVYVYPFEIAAVILLLAIVAAITLTLRRREGTHKQDVSRQLS 180
Query: 182 SNPDNSIVMVKVKS 195
D+ + +V++KS
Sbjct: 181 VKKDDRLRLVRMKS 194
>gi|297538947|ref|YP_003674716.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylotenera
sp. 301]
gi|297258294|gb|ADI30139.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylotenera
sp. 301]
Length = 217
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 113/195 (57%), Gaps = 2/195 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
Q + FY + + + ++ V+T RNP+Y+ L+ AF AAG++LLL AEF+A+ ++VY
Sbjct: 8 FQDIVFYTLAAVLLYAAISVITTRNPVYAALYLVLAFFTAAGIWLLLEAEFLAIALVLVY 67
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV+V FLF++MMLDI+++ + +G L A +V F A+ ++
Sbjct: 68 VGAVMVLFLFVVMMLDINLDKLREGFWNALPVALPVGGLMAVEMVMIVGVRNFGADKVIA 127
Query: 123 RL--VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+N +G+VLYT Y P E++ +LL++++ AI L LR R++ K D SKQ+
Sbjct: 128 PPAHAADYSNTAELGRVLYTDYLLPFELASVVLLVAIVAAIALTLRDRKESKSVDPSKQV 187
Query: 181 ESNPDNSIVMVKVKS 195
+ I ++K+ +
Sbjct: 188 LVKKADRIRILKMDA 202
>gi|152979954|ref|YP_001353161.1| NADH dehydrogenase I chain J [Janthinobacterium sp. Marseille]
gi|151280031|gb|ABR88441.1| NADH dehydrogenase I chain J [Janthinobacterium sp. Marseille]
Length = 213
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 110/195 (56%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+FS + ++++ V+T NP+++ L+ +F +AA L++LL AEF++++ ++
Sbjct: 1 MEFTTVLFYVFSAILVLAAIRVITESNPVHAALFLVLSFCSAAALWMLLKAEFLSIVLIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MM+DI + + IG++ + + + +
Sbjct: 61 VYVGAVMVLFLFVVMMVDIKLTKLREGFWGYLPLAATIGVVIVLEMALVLFRGFWRSHTQ 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + N + +GK++YT Y Y EI+ +LL+ MI A+ L +R R+D K +
Sbjct: 121 VPEVSANIGNAKELGKLIYTDYLYAFEIAAVLLLVGMIAAVALTMRKRKDSKYFAPGDAV 180
Query: 181 ESNPDNSIVMVKVKS 195
+ + +VK+K+
Sbjct: 181 RVKASDRLRVVKMKA 195
>gi|300691034|ref|YP_003752029.1| NADH-quinone oxidoreductase subunit J [Ralstonia solanacearum
PSI07]
gi|299078094|emb|CBJ50737.1| NADH-quinone oxidoreductase subunit J [Ralstonia solanacearum
PSI07]
Length = 210
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 112/195 (57%), Gaps = 2/195 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FY FS + ++S+ V+T +NP+++ L+ +F AA +++LL AEF+A+ ++
Sbjct: 1 MEITTIIFYCFSLVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN--FMVFSAE 118
VYVGAV+V FLF++MM+D+DIE F+G + + FM S
Sbjct: 61 VYVGAVMVLFLFVVMMIDVDIENLRRDFWTYVPMGAFVGAVIIMEMAVVLTKAFMGRSQP 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ G N + +GK++YT Y Y E++G +LLL+++ A+ L R R+D K Q ++
Sbjct: 121 VQELPKTLSGPNTQALGKLIYTDYIYAFEVAGAVLLLAIVAAVALTARRRKDSKAQKVAD 180
Query: 179 QLESNPDNSIVMVKV 193
Q+ + + +V +
Sbjct: 181 QIRVQRKDRVRLVSM 195
>gi|146341104|ref|YP_001206152.1| NADH dehydrogenase subunit J [Bradyrhizobium sp. ORS278]
gi|146193910|emb|CAL77927.1| NADH-quinone oxidoreductase chain J (NADH dehydrogenase I, chain J)
(NDH-1, chain J) [Bradyrhizobium sp. ORS278]
Length = 212
Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++ +LFFYLF+ + + S+ +V+ +NP++SV LI AFVNA+GLF+L+GAEF+AMI +V
Sbjct: 1 MILPALFFYLFAAVCVASAVMVIVSKNPVHSVLYLILAFVNASGLFVLMGAEFLAMILIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF+IMMLD+D + IG + ++ ++ V +
Sbjct: 61 VYVGAVAVLFLFVIMMLDVDFTELREGFLQYMPIGLVIGGIFLFELLLTVSYWVINPSTP 120
Query: 121 L---SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + N E +G VLYT+Y + ++SG ILL++MIGAIVL LRH+ +KRQDI+
Sbjct: 121 KAITAAIPTNVTNTEALGLVLYTKYVHYFQLSGMILLVAMIGAIVLTLRHKASVKRQDIN 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q PD ++ + KV G+G+
Sbjct: 181 VQNARTPDMAMAVRKVAVGQGL 202
>gi|310816704|ref|YP_003964668.1| NADH dehydrogenase subunit J [Ketogulonicigenium vulgare Y25]
gi|308755439|gb|ADO43368.1| NADH dehydrogenase subunit J [Ketogulonicigenium vulgare Y25]
Length = 204
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 75/198 (37%), Positives = 118/198 (59%), Gaps = 3/198 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FY+F+ +I + VT RNP+++V LI AF++AAGLF+L GAEFVAMI ++VYVG
Sbjct: 2 AFIFYVFAAGTLIGGLMTVTARNPVHAVLWLISAFLSAAGLFVLQGAEFVAMILMIVYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE---L 121
AV V FLF++MMLD+D + + IG + A +V +
Sbjct: 62 AVAVLFLFVVMMLDVDFAALRAKSRAFVPVGVVIGAVLAAQLVMVFGDWSAAPGASARLA 121
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ +N + +LY +Y +++G +LL++MIGAIVL +RHR+D+KRQ++ +Q+
Sbjct: 122 TPTPAGVDNTHALALILYDRYFIAFQLAGLVLLVAMIGAIVLTMRHRQDVKRQNVLEQMS 181
Query: 182 SNPDNSIVMVKVKSGKGI 199
+P +I M SG+G+
Sbjct: 182 RDPAKAIRMANPGSGQGL 199
>gi|17546772|ref|NP_520174.1| NADH dehydrogenase subunit J [Ralstonia solanacearum GMI1000]
gi|17429072|emb|CAD15760.1| probable transmembrane nadh dehydrogenaseI(chain j) oxidoreductase
protein [Ralstonia solanacearum GMI1000]
Length = 210
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 113/195 (57%), Gaps = 2/195 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FY FS + ++S+ V+T +NP+++ L+ +F AA +++LL AEF+A+ ++
Sbjct: 1 MEITTIIFYCFSLVLVLSALKVITAKNPVHAALFLVLSFFTAAAIWMLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN--FMVFSAE 118
VYVGAV+V FLF++MM+D+DIE F+G + + FM S
Sbjct: 61 VYVGAVMVLFLFVVMMIDVDIEHLRRDFWTYVPMGAFVGAVIIMEMAVVLTKAFMGRSQP 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ G N + +GK++YT Y Y E++G +LLL+++ A+ L R R+D K Q+++
Sbjct: 121 VQELPKALSGPNTQALGKLIYTDYIYAFEVAGAVLLLAIVAAVALTARRRKDSKAQNVAD 180
Query: 179 QLESNPDNSIVMVKV 193
Q+ + + +V +
Sbjct: 181 QIRVQRKDRVRLVSM 195
>gi|77463083|ref|YP_352587.1| NADH dehydrogenase subunit J [Rhodobacter sphaeroides 2.4.1]
gi|126461955|ref|YP_001043069.1| NADH dehydrogenase subunit J [Rhodobacter sphaeroides ATCC 17029]
gi|332557956|ref|ZP_08412278.1| NADH:ubiquinone oxidoreductase subunit J [Rhodobacter sphaeroides
WS8N]
gi|77387501|gb|ABA78686.1| NADH dehydrogenase I-ubiquinone oxidoreductase subunit 6 (chain J)
[Rhodobacter sphaeroides 2.4.1]
gi|126103619|gb|ABN76297.1| NADH dehydrogenase (quinone) [Rhodobacter sphaeroides ATCC 17029]
gi|332275668|gb|EGJ20983.1| NADH:ubiquinone oxidoreductase subunit J [Rhodobacter sphaeroides
WS8N]
Length = 204
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 124/204 (60%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY F+ A+ ++ +VVT RN +++V LI F+++AG+F+LLGAEFVAM+ ++
Sbjct: 1 MSVADVAFYCFAVPAVFAALMVVTQRNMVHAVLWLILVFLSSAGMFVLLGAEFVAMLLVI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV-----F 115
VYVGAV V FLF++MMLD+D E + R + +GI+ + V
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFEALKSEVVRYMPVAALMGIVILLQLSMGIGAWVTADGAP 120
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ ++ + N +G ++Y +Y Y + +G ILL++M+GAI+L LR RRD+KRQ+
Sbjct: 121 AMRQAVTPDPNQIENSRALGLLIYDKYLYLFQTAGLILLVAMVGAILLTLRERRDVKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
+ Q+ +P ++ + VK G+G+
Sbjct: 181 VLAQMWRDPAKAMELKDVKPGQGL 204
>gi|163746213|ref|ZP_02153572.1| NADH dehydrogenase subunit J [Oceanibulbus indolifex HEL-45]
gi|161380958|gb|EDQ05368.1| NADH dehydrogenase subunit J [Oceanibulbus indolifex HEL-45]
Length = 200
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 84/200 (42%), Positives = 121/200 (60%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ I V RNP++SV LI +F++AAGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MTVFSFYLFAISVITGGLFTVISRNPVHSVLWLILSFLSAAGLFVLLGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL- 121
VGAV V FLF++MMLD+D + R + I ++ V A SA E
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIALVILMQFVMAFGAWEQSAAAEGL 120
Query: 122 --SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ + N E +G +LY +Y +++G ILL++MIGAIVL LRHR+D+KRQD+ Q
Sbjct: 121 RLNTIDPDRFNTEALGLLLYDRYFLLFQLAGLILLVAMIGAIVLTLRHRKDVKRQDVVAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VKSG+G+
Sbjct: 181 MMRDPAKAMELRDVKSGQGL 200
>gi|260434166|ref|ZP_05788137.1| NADH-quinone oxidoreductase subunit j [Silicibacter
lacuscaerulensis ITI-1157]
gi|260417994|gb|EEX11253.1| NADH-quinone oxidoreductase subunit j [Silicibacter
lacuscaerulensis ITI-1157]
Length = 200
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 120/200 (60%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ AI V R P++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLD+D + R + IG++ V A + +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLVILMQFVMAFGAWESAQGAAAN 120
Query: 123 ---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ +N E +G +LY QY +++G ILL++MIGAIVL LRHR+D+KRQD+ Q
Sbjct: 121 LAQPIPADRHNTEALGLILYDQYFLLFQLAGLILLVAMIGAIVLTLRHRKDVKRQDVIAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MMRDPAQALELKDVKPGQGL 200
>gi|254509596|ref|ZP_05121663.1| NADH dehydrogenase i, j subunit [Rhodobacteraceae bacterium KLH11]
gi|221533307|gb|EEE36295.1| NADH dehydrogenase i, j subunit [Rhodobacteraceae bacterium KLH11]
Length = 200
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ AI V R P++SV LI +F+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MTVFAFYLFAISAITGGLFTVISRQPVHSVLWLILSFLSSAGLFVLLGAEFVAMLLIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLD+D + R + IG++ V A + +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLVILMQFVMAFGAWDSAQGAAAN 120
Query: 123 ---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ +N E +G +LY QY +++G ILL++MIGAIVL LRHR+DIKRQDI Q
Sbjct: 121 LAQPVPTDRHNTEALGVILYDQYFLLFQLAGLILLVAMIGAIVLTLRHRQDIKRQDIIGQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MMRDPAKAMELKDVKPGQGL 200
>gi|319782991|ref|YP_004142467.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317168879|gb|ADV12417.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 206
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+++ FFYLF+F+A+ S+F+V++ RNP++SV LI F NAAGLF+L GAEF+AMI LVVY
Sbjct: 5 LEAAFFYLFAFVAVASAFMVISSRNPVHSVLFLILTFFNAAGLFMLTGAEFLAMILLVVY 64
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV+V FLF++MMLD+D + + +G++ A ++ F+ + +
Sbjct: 65 VGAVMVLFLFVVMMLDVDFAELKSGALQYAPIGALVGLILAAELIVVLGGYTFAPQLAST 124
Query: 123 -----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ N +G +LYT Y Y +ISG +LL++MIGAIVL LRH+ +KRQ I+
Sbjct: 125 VSKPIPDLATRTNTAALGDILYTDYLYYFQISGLVLLVAMIGAIVLTLRHKPGVKRQSIA 184
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ P + + KVK+G+G+
Sbjct: 185 AQVGRTPATGMEIRKVKTGEGL 206
>gi|114765007|ref|ZP_01444154.1| NADH dehydrogenase subunit J [Pelagibaca bermudensis HTCC2601]
gi|114542554|gb|EAU45579.1| NADH dehydrogenase subunit J [Roseovarius sp. HTCC2601]
Length = 202
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 79/202 (39%), Positives = 119/202 (58%), Gaps = 5/202 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ I+ V RNP++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MTVFAFYLFALCTIVGGLFTVISRNPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM-----VFSA 117
VGAV V FLF++MMLD+D + + IG++ + A S
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELRAGMAKYMPLALLIGVILLMQLGMAFGVWEVSEIAASQ 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ L + N +G +LY +Y +++G ILL++MIGAIVL LRHR+D+KRQ++
Sbjct: 121 LSAPTPLATETQNTAALGLLLYDRYFLLFQLAGLILLVAMIGAIVLTLRHRQDVKRQNVL 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ +P ++ + VK G+G+
Sbjct: 181 AQMYRDPKKAMELRDVKPGQGL 202
>gi|319943357|ref|ZP_08017639.1| NADH-quinone oxidoreductase subunit J [Lautropia mirabilis ATCC
51599]
gi|319743172|gb|EFV95577.1| NADH-quinone oxidoreductase subunit J [Lautropia mirabilis ATCC
51599]
Length = 254
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 121/194 (62%), Gaps = 1/194 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + S+ F+LF+ + + ++ V+T RNP++S L+ FV++A ++LL+ AEF+A++ ++
Sbjct: 1 MDVISVLFFLFALVTVFAATRVITARNPVHSALFLVLTFVSSAAIWLLMKAEFLAIVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-GILAAELIVCASNFMVFSAEG 119
VYVGAV+V FLF++MMLDID++ R F+ I+ EL + E
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDLDNLRVGFWRSLPVGLFVAAIIVVELSLVLWAHFGGVQEA 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+L + +N + +G++LYT Y YPLEI+G ILL++M+ AI L LR R+D K Q+ S+Q
Sbjct: 121 DLVQPAADYDNAKALGELLYTGYIYPLEIAGMILLVAMVAAIALTLRRRKDRKSQNPSQQ 180
Query: 180 LESNPDNSIVMVKV 193
+ + + +V +
Sbjct: 181 VRVRAADRVRLVSM 194
>gi|86137585|ref|ZP_01056162.1| NADH dehydrogenase I, J subunit [Roseobacter sp. MED193]
gi|85825920|gb|EAQ46118.1| NADH dehydrogenase I, J subunit [Roseobacter sp. MED193]
Length = 200
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ AI V R P++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFISSAGLFVLLGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE-- 120
VGAV V FLF++MMLD+D + + + IG++ V A +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAALKAEMAQYMPLALLIGLVILMQFVMAYGSWESAHGAAAQ 120
Query: 121 -LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ +N E +G ++Y QY ++SG ILL++MIGAI L LRHR+D+KRQD+ Q
Sbjct: 121 LAQPIPEDRHNTEALGLIIYDQYFLLFQLSGLILLVAMIGAITLTLRHRKDVKRQDVMLQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + +K G+G+
Sbjct: 181 MSRDPAKAMELKDIKPGQGL 200
>gi|34496405|ref|NP_900620.1| NADH-ubiquinone oxidoreductase, chain J [Chromobacterium violaceum
ATCC 12472]
gi|34102258|gb|AAQ58624.1| NADH-ubiquinone oxidoreductase, chain J [Chromobacterium violaceum
ATCC 12472]
Length = 214
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 67/201 (33%), Positives = 116/201 (57%), Gaps = 2/201 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FY+ S + + + VVT +NP+++ L+ AF +AG +LL+ +EF+A+ ++
Sbjct: 1 MNLTTVIFYVLSAILVFAGLRVVTAKNPVHAALYLVLAFFTSAGHWLLMESEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAEL--IVCASNFMVFSAE 118
VYVGAV+V FLF++MMLDI+IE + + +G + ++ S S
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIEKLREGFWKNLPVAATVGAIMVFEMALILVSPQASLSQY 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ L +NV+ +G LYT Y P EI+ +LLL+MI AI L +R R+D K D +
Sbjct: 121 KAAAPLAADFSNVKMLGSQLYTTYLLPFEIAAVVLLLAMIAAIGLTMRTRKDSKVIDPAV 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q++ ++ + +VK+ + K +
Sbjct: 181 QVKVRREDRVRIVKMDAVKKV 201
>gi|56697605|ref|YP_167974.1| NADH dehydrogenase subunit J [Ruegeria pomeroyi DSS-3]
gi|56679342|gb|AAV96008.1| NADH dehydrogenase I, J subunit [Ruegeria pomeroyi DSS-3]
Length = 200
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 119/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ AI V R P++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFISSAGLFVLLGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE-- 120
VGAV V FLF++MMLD+D + R + IG++ V A +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLVILMQFVMAYGAWETAEGAAGH 120
Query: 121 -LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ +N E +G ++Y QY +++G ILL++MIGAIVL LRHR+D+KRQDI Q
Sbjct: 121 LAQPMPADRHNTEALGLIIYDQYFLLFQLAGLILLVAMIGAIVLTLRHRQDVKRQDIVAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MMRDPAKAMELKDVKPGQGL 200
>gi|254476174|ref|ZP_05089560.1| NADH dehydrogenase i, j subunit [Ruegeria sp. R11]
gi|214030417|gb|EEB71252.1| NADH dehydrogenase i, j subunit [Ruegeria sp. R11]
Length = 200
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 83/200 (41%), Positives = 119/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ AI V R P++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MTVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFISSAGLFVLLGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL- 121
VGAV V FLF++MMLD+D + R + IG++ V A +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLVILMQFVMAFGAWESAPAAGSQ 120
Query: 122 --SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ +N E +G +LY QY ++SG ILL++MIGAIVL LRHR+D+KRQD+ Q
Sbjct: 121 LAQPIPADKHNTEALGLILYDQYFLLFQLSGLILLVAMIGAIVLTLRHRQDVKRQDVVAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MMRDPAKAMELKDVKPGQGL 200
>gi|159043873|ref|YP_001532667.1| NADH dehydrogenase subunit J [Dinoroseobacter shibae DFL 12]
gi|157911633|gb|ABV93066.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Dinoroseobacter shibae DFL 12]
Length = 204
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 121/204 (59%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FYLF+ + + V RNP++SV LI AF+++AGLF+LLGAEFVAM+ ++
Sbjct: 1 MTVADITFYLFAITVVTAGLFVTLARNPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE-- 118
VYVGAV V FLF++MMLD+D + + IGI+ + FS E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELKAEMASYIPMAALIGIVLLMQLAMVFGNWTFSEEAL 120
Query: 119 ---GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
G ++ + + N +G ++Y Y + SG ILL++MIGAIVL LRHR IKRQ+
Sbjct: 121 AQRGAVTPDLNEVQNTAALGLLIYDDYILLFQASGLILLVAMIGAIVLTLRHRVGIKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
+ Q++ +P ++ + VK G+G+
Sbjct: 181 VVAQMQRDPAKAMELKDVKPGQGL 204
>gi|126740390|ref|ZP_01756078.1| NADH dehydrogenase subunit J [Roseobacter sp. SK209-2-6]
gi|126718526|gb|EBA15240.1| NADH dehydrogenase subunit J [Roseobacter sp. SK209-2-6]
Length = 200
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 80/200 (40%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ AI V R P++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFISSAGLFVLLGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL- 121
VGAV V FLF++MMLD+D + + + IG++ V A +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAALKAEMAQYMPLALLIGLVILMQFVMAYGSWESAHGASEL 120
Query: 122 --SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+N E +G ++Y QY ++SG ILL++MIGAI+L LRHR+D+KRQD+ Q
Sbjct: 121 LAQPTPADKHNTEALGLIIYDQYFLLFQLSGLILLVAMIGAIMLTLRHRQDVKRQDVLAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MYRDPAKAMELKDVKPGQGL 200
>gi|149914593|ref|ZP_01903123.1| NADH dehydrogenase subunit J [Roseobacter sp. AzwK-3b]
gi|149811386|gb|EDM71221.1| NADH dehydrogenase subunit J [Roseobacter sp. AzwK-3b]
Length = 202
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 87/202 (43%), Positives = 122/202 (60%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M M + FYLF+ A+ V RNP++SV LI AF+++AGLF+LLGAEFVAM+ ++
Sbjct: 1 MSMTVMSFYLFAISALAGGLFTVISRNPVHSVLWLILAFISSAGLFVLLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + R + IG++ A S E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAALKAEMARYMPLALLIGVILLMQFGLAFGNWQMSEGAE 120
Query: 121 LSRLVFKGNNVEN---IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+R + VEN +G +LY +Y + SG ILL++MIGAIVL LRHR DIKRQD+
Sbjct: 121 AARAAVTPDGVENTAALGMLLYDKYFLLFQTSGLILLVAMIGAIVLTLRHRSDIKRQDVL 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ +P ++ + VK G+G+
Sbjct: 181 AQMYRDPAKAMELKDVKPGQGL 202
>gi|227821628|ref|YP_002825598.1| NADH dehydrogenase subunit J [Sinorhizobium fredii NGR234]
gi|227340627|gb|ACP24845.1| NADH dehydrogenase subunit J [Sinorhizobium fredii NGR234]
Length = 204
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 96/204 (47%), Positives = 129/204 (63%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q LFFYLF+F+A+ S+F+V+ +NP+YSV LI F NAAGLFLL GAEF+AMI LV
Sbjct: 1 MGLQVLFFYLFAFIAVASAFMVIAAKNPVYSVLFLILTFFNAAGLFLLTGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID IG++ A ++ FS E
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFAELRAGVLEYAPVGALIGLILAAELIIVVGGSTFSPEIA 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
V + N +G VLYT Y Y +I+G +LL++MIGAIVL LRHR +IKRQ
Sbjct: 121 KGIAMPIPAVTERTNTAALGDVLYTHYIYFFQIAGLVLLVAMIGAIVLTLRHRENIKRQS 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I +Q+ +P+ ++ +V VK G+G+
Sbjct: 181 IPRQVARSPETAVEVVTVKPGQGL 204
>gi|110633385|ref|YP_673593.1| NADH dehydrogenase subunit J [Mesorhizobium sp. BNC1]
gi|110284369|gb|ABG62428.1| NADH dehydrogenase subunit J [Chelativorans sp. BNC1]
Length = 206
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 82/202 (40%), Positives = 133/202 (65%), Gaps = 5/202 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
++++FFYLF+F+ + ++F+V++ RNP++SV LI F NAA LFLL GAEF+AMI L+VY
Sbjct: 5 LEAIFFYLFAFIGVAAAFMVISARNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLIVY 64
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE---- 118
VGAV V FLF++MMLD+D + + +GI+ A ++ F+ E
Sbjct: 65 VGAVAVLFLFVVMMLDVDFAELKQGALQYAPVGAIVGIILAVELIVVLGGYAFTPEIAAE 124
Query: 119 -GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + + + +N +G +LYT Y Y +++G ILL++M+GAIVL LRH+ +++RQ+I+
Sbjct: 125 IAQPAPAIAERHNTAALGDILYTNYFYFFQVAGLILLVAMVGAIVLTLRHKPNVRRQNIA 184
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ P +I + KV++G+GI
Sbjct: 185 AQVARTPATAIEIRKVETGEGI 206
>gi|110680453|ref|YP_683460.1| NADH dehydrogenase subunit J [Roseobacter denitrificans OCh 114]
gi|109456569|gb|ABG32774.1| NADH-quinone oxidoreductase chain J [Roseobacter denitrificans OCh
114]
Length = 200
Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats.
Identities = 86/200 (43%), Positives = 120/200 (60%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ I V RNP++SV LI AF++AAGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MTVFAFYLFAISVIAGGLFTVISRNPVHSVLWLILAFLSAAGLFVLLGAEFVAMLLIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLD+D + + + IG++ A +A E
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMSKYLPLALLIGVVLLMQFAIAFGAWESNAAAEGM 120
Query: 123 RL---VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
R +N E +G +LY QY ++SG ILL++MIGAIVL LRHR D+KRQD+ Q
Sbjct: 121 RAQVTPVDRHNTEALGMILYDQYFLLFQLSGLILLVAMIGAIVLTLRHRSDVKRQDVVAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VKSG+G+
Sbjct: 181 MMRDPAKAMELKDVKSGQGL 200
>gi|163732048|ref|ZP_02139494.1| NADH dehydrogenase subunit J [Roseobacter litoralis Och 149]
gi|161394346|gb|EDQ18669.1| NADH dehydrogenase subunit J [Roseobacter litoralis Och 149]
Length = 200
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 86/200 (43%), Positives = 120/200 (60%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ I V RNP++SV LI AF++AAGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MTVFAFYLFAISVIAGGLFTVISRNPVHSVLWLILAFLSAAGLFVLLGAEFVAMLLIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLD+D + + + IG++ A +A E
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMSKYLPLALLIGVVLLMQFAIAFGAWESNAAAEGM 120
Query: 123 RL---VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
R +N E +G +LY QY ++SG ILL++MIGAIVL LRHR D+KRQD+ Q
Sbjct: 121 RAQVTPVDRHNTEALGLILYDQYFLLFQLSGLILLVAMIGAIVLTLRHRSDVKRQDVVAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VKSG+G+
Sbjct: 181 MMRDPAKAMELKDVKSGQGL 200
>gi|84516723|ref|ZP_01004081.1| NADH dehydrogenase subunit J [Loktanella vestfoldensis SKA53]
gi|84509191|gb|EAQ05650.1| NADH dehydrogenase subunit J [Loktanella vestfoldensis SKA53]
Length = 201
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 83/201 (41%), Positives = 124/201 (61%), Gaps = 2/201 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FYLF+ + V RNP++SV LI AF+++AGLF+ LGAEFVAM+ ++
Sbjct: 1 MSVFAFTFYLFAISTVTGGLFTVISRNPVHSVLWLILAFLSSAGLFVTLGAEFVAMLMII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--E 118
VYVGAV V FLF++MMLD+D + + + IG++ + A FS E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAGLKAEMTKYLPLALLIGVVILMQLAMALGVWGFSEGVE 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G ++ V + +N +G +LY QY ++SG ILL++MIGAIVL LRHR DIKRQ++
Sbjct: 121 GRIAAPVGELDNTRALGMLLYDQYFLLFQLSGLILLVAMIGAIVLTLRHRVDIKRQNVLN 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ +P ++ + VK G+G+
Sbjct: 181 QMYRDPAKAMELRDVKPGQGL 201
>gi|85703192|ref|ZP_01034296.1| NADH dehydrogenase subunit J [Roseovarius sp. 217]
gi|85672120|gb|EAQ26977.1| NADH dehydrogenase subunit J [Roseovarius sp. 217]
Length = 202
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 81/202 (40%), Positives = 122/202 (60%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FYLF+ +I V RNP++SV LI +F++AAGLF+LLGAEFVAM+ ++
Sbjct: 1 MTIAAMAFYLFAVSLLIGGLFTVISRNPVHSVLWLILSFISAAGLFVLLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + + + IG++ + E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELKAEMAKYMPLALLIGVILLMQFGLVFGNWQMADGAE 120
Query: 121 LSRLVFKGNNVEN---IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+R + VEN +G +LY Y +++G ILL++MIGAIVL LRHR D+KRQD+
Sbjct: 121 AARRSVTPDGVENTAALGLLLYDTYFILFQLAGLILLVAMIGAIVLTLRHRTDVKRQDVL 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ +P ++ + VK G+G+
Sbjct: 181 AQMYRDPAKAMELRDVKPGQGL 202
>gi|222148284|ref|YP_002549241.1| NADH dehydrogenase subunit J [Agrobacterium vitis S4]
gi|221735272|gb|ACM36235.1| NADH ubiquinone oxidoreductase chain J [Agrobacterium vitis S4]
Length = 204
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 94/204 (46%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q++FFYLF+F+A+ S+F+V++ RNP++SV LI FVNAAGLF+L GAEF+AMI LV
Sbjct: 1 MGLQAIFFYLFAFVAVASAFMVISSRNPVHSVLFLILTFVNAAGLFMLTGAEFLAMILLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID + + IG + A ++ S +
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFTELRAGASKYGPLAALIGAIVAAELIFVIGGSAISPAAK 120
Query: 121 LS-----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + N +G VLYT Y + +I+G +LL++MIGAIVL LRHR+ IKRQ+
Sbjct: 121 QAITMPIPALADRQNTAALGDVLYTNYVFFFQIAGLVLLVAMIGAIVLTLRHRQHIKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I+ Q+ P +I +VKVK G+GI
Sbjct: 181 IAHQVARGPATAIKVVKVKPGQGI 204
>gi|260428617|ref|ZP_05782596.1| NADH-quinone oxidoreductase subunit j [Citreicella sp. SE45]
gi|260423109|gb|EEX16360.1| NADH-quinone oxidoreductase subunit j [Citreicella sp. SE45]
Length = 200
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 78/200 (39%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLFS I+ V RNP++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MTVFAFYLFSLCTILGGLFTVISRNPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE-- 120
VGAV V FLF++MMLD+D + + IG++ + A S
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELRAGMAKYMPLALLIGVVILMQLGMAFGAWETSDLAAGQ 120
Query: 121 -LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ + N +G ++Y +Y +++G ILL++MIGAIVL LRHR+D+KRQ++ Q
Sbjct: 121 LSAPVPGDMQNTAALGVLIYDRYFLAFQLAGLILLVAMIGAIVLTLRHRQDVKRQNVLAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MWRDPAKAMELKDVKPGQGL 200
>gi|292493659|ref|YP_003529098.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosococcus
halophilus Nc4]
gi|291582254|gb|ADE16711.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosococcus
halophilus Nc4]
Length = 201
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 111/197 (56%), Gaps = 3/197 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + FY F+ + + ++ +V+TVRNP+ + L+ AF +A ++LLL AEF+A++ ++VY
Sbjct: 1 MEKILFYSFAAILLFAATMVITVRNPVRAALFLVLAFFTSAAIWLLLEAEFLAIVLVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF--SAEGE 120
+GAV+V FLF++MMLDI++ R F + L A ++ F
Sbjct: 61 IGAVMVLFLFVVMMLDINLAPLREGFARYLPVGFLVAALIALEMMAVLGAENFGLEQFTS 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+N + +G +LYT Y YP E++ ILL++++ AI L LR R K QD +Q+
Sbjct: 121 PPPQGPDYSNTKELGNLLYTVYVYPFELASVILLVAIVAAIALTLRRRT-SKAQDPVQQI 179
Query: 181 ESNPDNSIVMVKVKSGK 197
+ + +VK+ + K
Sbjct: 180 RVRRQDRVRLVKMAAEK 196
>gi|83858405|ref|ZP_00951927.1| NADH dehydrogenase subunit J [Oceanicaulis alexandrii HTCC2633]
gi|83853228|gb|EAP91080.1| NADH dehydrogenase subunit J [Oceanicaulis alexandrii HTCC2633]
Length = 202
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 121/201 (60%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + FY+ S A++S+ +VV +NP+ +V LI AF +AAGLF+LLGAEF+AMI ++V
Sbjct: 1 MLSAAAFYILSATAVLSALMVVIAKNPVRAVLFLILAFFSAAGLFVLLGAEFLAMILVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE- 120
YVGAV V FLF++MMLDID + + + A ++ V +
Sbjct: 61 YVGAVAVLFLFVVMMLDIDFAQLKEGFISHAPLGGVVALALAGILAMTGLSWVSADSASA 120
Query: 121 --LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
S NV +G ++Y +Y +I+G +LL++MIGAIVL LRHR +KRQD+
Sbjct: 121 ALQSPTPDDMTNVAALGALIYDRYVLFFQIAGLVLLVAMIGAIVLTLRHRDGVKRQDMHA 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ ++S+ +V +KSG+GI
Sbjct: 181 QVNRKREDSVEIVDIKSGEGI 201
>gi|89070161|ref|ZP_01157490.1| NADH dehydrogenase I, J subunit [Oceanicola granulosus HTCC2516]
gi|89044278|gb|EAR50424.1| NADH dehydrogenase I, J subunit [Oceanicola granulosus HTCC2516]
Length = 196
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 81/196 (41%), Positives = 122/196 (62%), Gaps = 3/196 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ I V RNP++SV LI AF+++AGLF+LLGAEFVAM+ ++VYVGAV
Sbjct: 1 MFYVFAVTTIAGGLFTVVSRNPVHSVLWLILAFLSSAGLFILLGAEFVAMLLVIVYVGAV 60
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL---SR 123
V FLF++MMLD+D + R + IGI+ + A F A + +
Sbjct: 61 AVLFLFVVMMLDVDFAALKAEMARYMPLALLIGIVILMQLALAFGVWTFGAGVDERLAAP 120
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
+V +N E +G +LY +Y +++G ILL++MIGAIVL LRHR D+KRQ++ +Q+ +
Sbjct: 121 VVGGVHNTEGLGFLLYDRYILLFQLAGLILLVAMIGAIVLTLRHREDVKRQNVLEQMYRD 180
Query: 184 PDNSIVMVKVKSGKGI 199
P ++ + VK G+G+
Sbjct: 181 PATAMELRDVKPGQGL 196
>gi|85717020|ref|ZP_01047982.1| NADH dehydrogenase subunit J [Nitrobacter sp. Nb-311A]
gi|85696144|gb|EAQ34040.1| NADH dehydrogenase subunit J [Nitrobacter sp. Nb-311A]
Length = 211
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 83/201 (41%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ FFYLF+ + + S+ +V++ RNP++SV LI AFVNAAGLF+LLGAEF+AMI +VV
Sbjct: 1 MILPAFFYLFAGVCVASAVMVISSRNPVHSVLFLILAFVNAAGLFILLGAEFLAMILIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA---E 118
YVGAV V FLF+IMMLD+D I + ++ + +
Sbjct: 61 YVGAVAVLFLFVIMMLDVDFAELREGFLEYLPFGLVIAAIFLLELLLVVGGWTLNPTVTK 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + +N E +G VLYT+Y + +++G +LL++MIGAIVL LRHR +KRQDI+
Sbjct: 121 SITAAIPGDVSNTEALGLVLYTKYIHYFQLAGMVLLVAMIGAIVLTLRHRVSVKRQDINV 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q P+ ++ + +V SG+G+
Sbjct: 181 QNARTPEMAMSVRQVASGQGL 201
>gi|163741478|ref|ZP_02148869.1| NADH dehydrogenase subunit J [Phaeobacter gallaeciensis 2.10]
gi|161385212|gb|EDQ09590.1| NADH dehydrogenase subunit J [Phaeobacter gallaeciensis 2.10]
Length = 200
Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 119/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ AI V R P++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFISSAGLFVLLGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL- 121
VGAV V FLF++MMLD+D + R + IG++ V A +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLVILMQFVMAYGAWETAPAAATQ 120
Query: 122 --SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ +N E +G ++Y QY ++SG ILL++MIGAIVL LRHR+D+KRQD+ Q
Sbjct: 121 LAQPIPTDQHNTEALGLIIYDQYFLLFQLSGLILLVAMIGAIVLTLRHRQDVKRQDVVAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MMRDPATAMELKDVKPGQGL 200
>gi|209518506|ref|ZP_03267327.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
sp. H160]
gi|209501051|gb|EEA01086.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
sp. H160]
Length = 230
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 116/203 (57%), Gaps = 6/203 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVACALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL------AAELIVCASNFMV 114
VYVGAV+V FLF++MMLD++++V KR + +G + +
Sbjct: 61 VYVGAVMVLFLFVVMMLDVNLDVLRKDFKRFVPMASAVGAIIVVETALILWHGYGATTAA 120
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + +N IGKV+YT Y + EI+G ILL+++I AI L H++D KRQ
Sbjct: 121 LHDTASAAAGMGDWSNTRVIGKVIYTNYIFAFEIAGLILLVAIIAAIALTTSHKKDSKRQ 180
Query: 175 DISKQLESNPDNSIVMVKVKSGK 197
++S Q+ + + +VK+ S K
Sbjct: 181 NVSAQVRVRAQDRVRVVKMPSEK 203
>gi|307730331|ref|YP_003907555.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
sp. CCGE1003]
gi|307584866|gb|ADN58264.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
sp. CCGE1003]
Length = 229
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 118/203 (58%), Gaps = 6/203 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVSSALFLVLAFFNAAAIWMLLQAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN------FMV 114
VYVGAV+V FLF++MMLDI+++V KR + +G + V
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDVLRKDFKRFVPMATLVGAIIVLETALILWHGYGATSTV 120
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + +N IGKV+YT Y + EI+G +LL+++I AI L H++D KRQ
Sbjct: 121 VRDTTAAASGMGDWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIALTTSHKKDSKRQ 180
Query: 175 DISKQLESNPDNSIVMVKVKSGK 197
IS+Q++ + + +VK+ S K
Sbjct: 181 KISQQVKVRAQDRVRVVKMPSEK 203
>gi|218200865|gb|EEC83292.1| hypothetical protein OsI_28652 [Oryza sativa Indica Group]
Length = 673
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 79/205 (38%), Positives = 123/205 (60%), Gaps = 8/205 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F V+T RNP+++V LI AF AA ++LLL AEF+A+ ++
Sbjct: 452 MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAAIWLLLKAEFLAIALVL 511
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+GAV+V FLF++MMLDI I+ R F + FIG L A + +
Sbjct: 512 VYLGAVMVLFLFVVMMLDIHIDTVRQGFWRHFPLAAFIGALIALEMAAVLMGGFRGMDEP 571
Query: 121 L--------SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ V + +N + +GK+LYT+Y YP+EI+ ILL++MI AI L LR R+D K
Sbjct: 572 KAVAAMVDAAGNVVQYSNTKALGKLLYTEYLYPVEIAAVILLVAMIAAIALTLRQRKDTK 631
Query: 173 RQDISKQLESNPDNSIVMVKVKSGK 197
+S+Q+ + + +VKV + +
Sbjct: 632 VTKVSEQVRVRAADRVALVKVAATQ 656
>gi|83718554|ref|YP_441623.1| NADH dehydrogenase subunit J [Burkholderia thailandensis E264]
gi|167580431|ref|ZP_02373305.1| NADH dehydrogenase subunit J [Burkholderia thailandensis TXDOH]
gi|167618540|ref|ZP_02387171.1| NADH dehydrogenase subunit J [Burkholderia thailandensis Bt4]
gi|257139681|ref|ZP_05587943.1| NADH dehydrogenase subunit J [Burkholderia thailandensis E264]
gi|83652379|gb|ABC36442.1| NADH dehydrogenase I, J subunit [Burkholderia thailandensis E264]
Length = 218
Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+FS + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MDFTTVLFYIFSLLLVVSGLKVITSRNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILA----AELIVCASNFMVFS 116
VYVGAV+V FLF++MMLDI+I+V KR + +G + A ++
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDVLRRDFKRFVPMATVVGAIIVVETALILWRGYGATGSP 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + N + IGKV+YT Y + EI+G +LL+++I A+ L + +D KRQ +
Sbjct: 121 VRDMAAGALAGMPNTKLIGKVIYTDYIFAFEIAGLVLLVAIIAAVALTAQKGKDSKRQRV 180
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
S+Q++ ++ + +VK+++ K
Sbjct: 181 SEQVKVRREDRVRLVKMQADK 201
>gi|295676046|ref|YP_003604570.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
sp. CCGE1002]
gi|295435889|gb|ADG15059.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
sp. CCGE1002]
Length = 230
Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats.
Identities = 70/203 (34%), Positives = 116/203 (57%), Gaps = 6/203 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVACALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN------FMV 114
VYVGAV+V FLF++MMLDI+++V KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDVLRKDFKRFVPMASAVGAIIVIETALILWHGYGATATA 120
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + +N IGKV+YT Y + EI+G ILL+++I AI L H++D KRQ
Sbjct: 121 LHDTASAAAGMGDWSNTRLIGKVIYTNYIFAFEIAGLILLVAIIAAIALTTSHKKDSKRQ 180
Query: 175 DISKQLESNPDNSIVMVKVKSGK 197
++S Q++ + + +VK+ S K
Sbjct: 181 NVSAQVKVRAQDRVRVVKMPSEK 203
>gi|221068603|ref|ZP_03544708.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Comamonas
testosteroni KF-1]
gi|220713626|gb|EED68994.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Comamonas
testosteroni KF-1]
Length = 226
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 9/206 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F VVT RNP+++V +LI AF AA ++LLL AEF+ + ++
Sbjct: 1 MDAKTGFFYLFSVVLLFAAFRVVTARNPVHAVLNLILAFSQAAAIWLLLKAEFLGIALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-------- 112
VY+GAV+V FLF++MMLDI I+ + F + IG+L A +
Sbjct: 61 VYLGAVMVLFLFVVMMLDIRIDAMRRGFWKHFPFAALIGVLIAFEMGMVLMGGFGDVEDA 120
Query: 113 -MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
V + + +N + +GK+LYT+Y YP+EI+ ILL++MI AI L LR R+D
Sbjct: 121 KAVGTTMVNAAGQTVPYSNTQALGKLLYTEYLYPVEIAAVILLVAMIAAIALTLRKRKDS 180
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGK 197
K + + Q+ + I +VKV S K
Sbjct: 181 KAMNPADQIRVRASDRIKLVKVDSTK 206
>gi|288958980|ref|YP_003449321.1| NADH dehydrogenase I chain J [Azospirillum sp. B510]
gi|288911288|dbj|BAI72777.1| NADH dehydrogenase I chain J [Azospirillum sp. B510]
Length = 204
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 123/204 (60%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++Q + FY+F+ + + S +V++ RNP++SV LI AF AAGL +L+GAEF+AMI ++
Sbjct: 1 MIVQGIAFYVFAALLVASGVMVISARNPVHSVLYLILAFFQAAGLCVLMGAEFIAMILVI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE-- 118
VYVGAV V FLF++MMLDI+ +G++ + + +
Sbjct: 61 VYVGAVAVLFLFVVMMLDINFRELRQGAMEALPLGALVGLILLAELAAVLGGWIVAPNVA 120
Query: 119 ---GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
G + + + N +G+++YTQY Y + SG ILL++MIGAIVL LRHR +++Q+
Sbjct: 121 ATIGAPTPALDQVTNTHALGRLIYTQYVYLFQASGIILLIAMIGAIVLTLRHRAGVRKQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
+ Q+ ++ + + KV +G+G+
Sbjct: 181 VGVQIARRREDVVAIRKVTTGEGV 204
>gi|299530751|ref|ZP_07044166.1| NADH-ubiquinone/plastoquinone oxidoreductase [Comamonas
testosteroni S44]
gi|298721267|gb|EFI62209.1| NADH-ubiquinone/plastoquinone oxidoreductase [Comamonas
testosteroni S44]
Length = 226
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 9/206 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F VVT RNP+++V +LI AF AA ++LLL AEF+ + ++
Sbjct: 1 MDAKTGFFYLFSVVLLFAAFRVVTARNPVHAVLNLILAFSQAAAIWLLLKAEFLGIALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-------- 112
VY+GAV+V FLF++MMLDI I+ + F + IG+L A +
Sbjct: 61 VYLGAVMVLFLFVVMMLDIRIDSMRRGFWKHFPFAALIGVLIAFEMGMVLMGGFGDVEDA 120
Query: 113 -MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
V + + +N + +GK+LYT+Y YP+EI+ ILL++MI AI L LR R+D
Sbjct: 121 KAVGATMVNAAGQTVPYSNTQALGKLLYTEYLYPVEIAAVILLVAMIAAIALTLRKRKDS 180
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGK 197
K + + Q+ + I +VKV S K
Sbjct: 181 KAMNPADQIRVRASDRIKLVKVDSTK 206
>gi|264677207|ref|YP_003277113.1| NADH-ubiquinone/plastoquinone oxidoreductase [Comamonas
testosteroni CNB-2]
gi|262207719|gb|ACY31817.1| NADH-ubiquinone/plastoquinone oxidoreductase [Comamonas
testosteroni CNB-2]
Length = 226
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 79/206 (38%), Positives = 121/206 (58%), Gaps = 9/206 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F VVT RNP+++V +LI AF AA ++LLL AEF+ + ++
Sbjct: 1 MDAKTGFFYLFSVVLLFAAFRVVTARNPVHAVLNLILAFSQAAAIWLLLKAEFLGIALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-------- 112
VY+GAV+V FLF++MMLDI I+ + F + IG+L A +
Sbjct: 61 VYLGAVMVLFLFVVMMLDIRIDSMRRGFWKHFPFAALIGVLIAFEMGMVLMGGFGDVEDA 120
Query: 113 -MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
V + + +N + +GK+LYT+Y YP+EI+ ILL++MI AI L LR R+D
Sbjct: 121 KAVGATMVNAAGQTVPYSNTQALGKLLYTEYLYPVEIAAVILLVAMIAAIALTLRKRKDS 180
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGK 197
K + + Q+ + I +VKV S K
Sbjct: 181 KAMNPADQIRVRASDRIKLVKVDSTK 206
>gi|148555901|ref|YP_001263483.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Sphingomonas
wittichii RW1]
gi|148501091|gb|ABQ69345.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Sphingomonas
wittichii RW1]
Length = 203
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 119/201 (59%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q++ FYLF+ + + S L + RNP++SV LI AF NAAGL +L+GAEF+AM+ ++V
Sbjct: 1 MIQTIAFYLFAALVVASGTLTILARNPVHSVLWLILAFFNAAGLMILVGAEFIAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM---VFSAE 118
YVGAV V FLF++MMLDID + + ++ A ++ A
Sbjct: 61 YVGAVAVLFLFVVMMLDIDFAELRAGFAQYLPFGILLVLVLAAEMIFAIGAWKAGGIDMG 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
++ + N+E IG ++YT+Y Y E +G ILL++++GAIVL R R +K Q+++
Sbjct: 121 ARIAPTPSEVPNIEAIGTLIYTRYLYIFEGAGLILLVALVGAIVLTHRTRGGVKTQNVTA 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q P+++ VK G+G+
Sbjct: 181 QNMRRPEDATRNVKPAVGQGV 201
>gi|94496471|ref|ZP_01303048.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Sphingomonas
sp. SKA58]
gi|94424217|gb|EAT09241.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Sphingomonas
sp. SKA58]
Length = 203
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 115/201 (57%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + FYLF+ + + S L + RNP++SV LI AF NAAGL +LLGAEF+AM+ ++V
Sbjct: 1 MIHVVAFYLFATIVVCSGALTILSRNPVHSVLWLILAFFNAAGLMILLGAEFIAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA---E 118
YVGAV V FLF++MMLDID + ++ IV
Sbjct: 61 YVGAVAVLFLFVVMMLDIDFAELRAGFVSYLPFGLLVALVLLAEIVLGIGLWSVGPIELA 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + +N++ IG +LYT+Y + E +G +LL++MIGAIVL R R ++ Q+I++
Sbjct: 121 QRAGPVNPELSNIQAIGALLYTRYIFLFEAAGIVLLVAMIGAIVLTHRARGGVRPQNIAR 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q + P +++ V G+G+
Sbjct: 181 QNQRRPQDAVRNVNQPVGQGV 201
>gi|90417834|ref|ZP_01225746.1| NADH dehydrogenase I, J subunit [Aurantimonas manganoxydans
SI85-9A1]
gi|90337506|gb|EAS51157.1| NADH dehydrogenase I, J subunit [Aurantimonas manganoxydans
SI85-9A1]
Length = 205
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q++FFYLF+ +A+ S +VV RNP++SV LI FV AAGLFLL GAEF+A+I +VVY
Sbjct: 4 LQAVFFYLFALVAVGSGLMVVLARNPVHSVLFLILTFVAAAGLFLLAGAEFLALILIVVY 63
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV + FLF++MMLDID + + IG++ +V A+ + + ++
Sbjct: 64 VGAVAILFLFVVMMLDIDFGRVKRDTLKYAPVGVIIGVVLLAELVIAATGNYYDPQMAVA 123
Query: 123 -----RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N+E +G VLYT+Y +++G IL ++M+GAIVL LRH+ +KRQ I
Sbjct: 124 TSMPIPPLEVVSNIEALGSVLYTRYILFFQLAGLILFVAMVGAIVLTLRHKEGLKRQSIP 183
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
+Q+ P ++ + KV+SGKGI
Sbjct: 184 QQVGRTPATAVEIRKVESGKGI 205
>gi|302879332|ref|YP_003847896.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Gallionella
capsiferriformans ES-2]
gi|302582121|gb|ADL56132.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Gallionella
capsiferriformans ES-2]
Length = 200
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 114/197 (57%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FYLF+ + +++ VV RNP+++ L+ AF +AAG+++LL AEF+A+ ++
Sbjct: 1 MSFFDVVFYLFATITVLAGVGVVVARNPVHAALFLVLAFCSAAGIWMLLEAEFLAITLIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI++ R F + L +V + +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLVKLREGFWRWFPFGALLAGLMVFEMVWVLGSRQTADVSK 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+N + +G+++YTQY YP EI+ ILL++M+ AI L LR R +K Q+++ Q+
Sbjct: 121 AIVHAADYSNTKELGRLIYTQYVYPFEIAAVILLVAMVAAIALTLRRRAGVKSQNVADQV 180
Query: 181 ESNPDNSIVMVKVKSGK 197
+ + + +V +KS
Sbjct: 181 KVKKADRLRIVSMKSEP 197
>gi|266660|sp|P29922|NQO10_PARDE RecName: Full=NADH-quinone oxidoreductase chain 10; AltName:
Full=NADH dehydrogenase I, chain 10; AltName:
Full=NDH-1, chain 10
gi|150612|gb|AAA25596.1| NADH dehydrogenase [Paracoccus denitrificans]
Length = 200
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 128/200 (64%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FYLF+ A ++ F+VV RNP++SV LI AF++AAGLF+L GAEFVAM+ +VVY
Sbjct: 1 MMTFAFYLFAISACVAGFMVVIGRNPVHSVLWLILAFLSAAGLFVLQGAEFVAMLLVVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLD+D + R + IG++ + A + S + E
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKGELARYLPLALVIGVVLLAQLGIAFSGWTPSDQAESL 120
Query: 123 RLVFKGNNVEN---IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
R VEN +G VLY +Y +++G +LL++MIGAIVL +RHR+D+KRQ++ +Q
Sbjct: 121 RAAPVDAAVENTLGLGLVLYDRYVLMFQLAGLVLLVAMIGAIVLTMRHRKDVKRQNVLEQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MWRDPAKTMELKDVKPGQGL 200
>gi|163738811|ref|ZP_02146225.1| NADH dehydrogenase subunit J [Phaeobacter gallaeciensis BS107]
gi|161388139|gb|EDQ12494.1| NADH dehydrogenase subunit J [Phaeobacter gallaeciensis BS107]
Length = 200
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 119/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ AI V R P++SV LI AF+++AGLF+LLGAEFVAM+ ++VY
Sbjct: 1 MSVFAFYLFAISAITGGLFTVISRQPVHSVLWLILAFISSAGLFVLLGAEFVAMLLIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL- 121
VGAV V FLF++MMLD+D + R + IG++ V A +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLVILMQFVMAFGAWETAPAAATQ 120
Query: 122 --SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ +N E +G ++Y QY ++SG ILL++MIGAIVL LRHR+D+KRQD+ Q
Sbjct: 121 LAQPIPADQHNTEALGLIIYDQYFLLFQLSGLILLVAMIGAIVLTLRHRQDVKRQDVVAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MMRDPATAMELKDVKPGQGL 200
>gi|83951756|ref|ZP_00960488.1| NADH dehydrogenase subunit J [Roseovarius nubinhibens ISM]
gi|83836762|gb|EAP76059.1| NADH dehydrogenase subunit J [Roseovarius nubinhibens ISM]
Length = 202
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 82/202 (40%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + +L FYLF+ I+ V RNP++SV LI +F++AAGLF+LLGAEFVAM+ ++
Sbjct: 1 MTVFALAFYLFATCVIVGGLFTVISRNPVHSVLWLILSFLSAAGLFVLLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + R + IG++ A F+ E
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGVVLLMQFALAYGAWDFAEGAE 120
Query: 121 LSRLVFKGNNVEN---IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+R + VEN +G ++Y +Y ++SG ILL++M+GAI L LRHR+D+KRQ++
Sbjct: 121 AARGAVTPDGVENTAALGLLIYDKYFLLFQLSGLILLVAMVGAIALTLRHRQDVKRQNVL 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ +P ++ + VK G+G+
Sbjct: 181 AQMYRDPAKAMELRDVKPGQGL 202
>gi|323525445|ref|YP_004227598.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
sp. CCGE1001]
gi|323382447|gb|ADX54538.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
sp. CCGE1001]
Length = 227
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 72/203 (35%), Positives = 118/203 (58%), Gaps = 6/203 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVSSALFLVLAFFNAAAIWMLLQAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN------FMV 114
VYVGAV+V FLF++MMLDI+++V KR + +G + V
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDVLRKDFKRFVPMATVVGAIIVLETALILWHGYGATSTV 120
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + +N IGKV+YT Y + EI+G +LL+++I AI L H++D KRQ
Sbjct: 121 VRDTTAAASGMGDWSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAIALTTSHKKDSKRQ 180
Query: 175 DISKQLESNPDNSIVMVKVKSGK 197
IS+Q++ + + +VK+ S K
Sbjct: 181 TISQQVKVRAQDRVRVVKMPSEK 203
>gi|171058194|ref|YP_001790543.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Leptothrix
cholodnii SP-6]
gi|170775639|gb|ACB33778.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Leptothrix
cholodnii SP-6]
Length = 216
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 118/196 (60%), Gaps = 1/196 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY+FS + + ++F V+T R+P+++ L+ AF A+ +++LL AEF+A+ ++
Sbjct: 1 MDTTTALFYVFSAVLLFAAFRVITARSPVHAALYLVLAFFTASCVWMLLQAEFLAISLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAEG 119
VYVGAV+V FLF++MMLDI+++V F + +G I+A E+ V
Sbjct: 61 VYVGAVMVLFLFVVMMLDINVDVLRQGFWSHFPVAATVGVIIALEMAVVLLRGFNLPIAK 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ N + +G LYT Y YPLEI+ ILL+++I AI L LR R+D+K Q+ ++Q
Sbjct: 121 AMPGAAEGVPNTKLLGIELYTDYLYPLEIAAVILLVAIIAAIALTLRRRKDVKGQNPAEQ 180
Query: 180 LESNPDNSIVMVKVKS 195
+++ + + +VK+
Sbjct: 181 VKAKKADRLRIVKMDP 196
>gi|114797370|ref|YP_760458.1| NADH-quinone oxidoreductase subunit J [Hyphomonas neptunium ATCC
15444]
gi|114737544|gb|ABI75669.1| NADH-quinone oxidoreductase, J subunit [Hyphomonas neptunium ATCC
15444]
Length = 197
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 77/197 (39%), Positives = 118/197 (59%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F L + + ++++ V+ RNP++SV LI F +AAGL +L+GAEF+AM+ +VVY
Sbjct: 1 MALIAFSLIAAIVVLAAMFVIAARNPVHSVLWLILTFFSAAGLLVLIGAEFLAMLLVVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLD+D + R + + +G++ + S EG ++
Sbjct: 61 VGAVAVLFLFVVMMLDVDFVELKQGTLRYWPFALLVGVILLAELALVSVAGDAIPEGNMN 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
N E IG V+YT Y ++SG +LL++M+GAIVL LRHR IKRQDI+KQ
Sbjct: 121 ASPNAPTNAEAIGYVMYTDYLLLFQLSGIVLLIAMVGAIVLTLRHRPHIKRQDIAKQTGR 180
Query: 183 NPDNSIVMVKVKSGKGI 199
+++ + G+GI
Sbjct: 181 RRVDAVDLKDPTPGQGI 197
>gi|114569914|ref|YP_756594.1| NADH dehydrogenase (quinone) [Maricaulis maris MCS10]
gi|114340376|gb|ABI65656.1| NADH dehydrogenase subunit J [Maricaulis maris MCS10]
Length = 203
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 81/201 (40%), Positives = 123/201 (61%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ +L F+ FS +AI+S+ +VV RNP+ SV LI AF +AAGLF+LLGAEF+AM+ +VV
Sbjct: 1 MLANLAFWAFSGVAILSALMVVIARNPVRSVLFLILAFFSAAGLFVLLGAEFLAMLLIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE- 120
YVGAV V FLF++MMLD+D + + I+ A + S +
Sbjct: 61 YVGAVAVLFLFVVMMLDVDFTELKQGFLSYLPLGGLVAIILAVELGMIGMTWQASEQAMA 120
Query: 121 --LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + NVE +G V+Y QY Y + +G +LL++MIGAIVL LRH+ ++RQ +S
Sbjct: 121 LRDAAIPDGLTNVEALGLVIYDQYVYFFQAAGLVLLVAMIGAIVLTLRHKPGVRRQSVSA 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ + +++ M +K G+GI
Sbjct: 181 QVARDRKDAVTMHDIKPGQGI 201
>gi|119384967|ref|YP_916023.1| NADH dehydrogenase subunit J [Paracoccus denitrificans PD1222]
gi|119374734|gb|ABL70327.1| NADH dehydrogenase subunit J [Paracoccus denitrificans PD1222]
Length = 199
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 84/198 (42%), Positives = 127/198 (64%), Gaps = 3/198 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FYLF+ A ++ F+VV RNP++SV LI AF++AAGLF+L GAEFVAM+ +VVYVG
Sbjct: 2 TFAFYLFAISACVAGFMVVIGRNPVHSVLWLILAFLSAAGLFVLQGAEFVAMLLVVVYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV V FLF++MMLD+D + R + IG++ + A + S + E R
Sbjct: 62 AVAVLFLFVVMMLDVDFAELKGELARYLPLALVIGVVLLAQLGIAFSGWTPSDQAESLRA 121
Query: 125 VFKGNNVEN---IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
VEN +G VLY +Y +++G +LL++MIGAIVL +RHR+D+KRQ++ +Q+
Sbjct: 122 APVDAAVENTLGLGLVLYDRYVLMFQLAGLVLLVAMIGAIVLTMRHRKDVKRQNVLEQMW 181
Query: 182 SNPDNSIVMVKVKSGKGI 199
+P ++ + VK G+G+
Sbjct: 182 RDPAKTMELKDVKPGQGL 199
>gi|182679343|ref|YP_001833489.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Beijerinckia
indica subsp. indica ATCC 9039]
gi|182635226|gb|ACB96000.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 202
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 124/202 (61%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q+ FF LFS + I+S+ +V+ RNP++SV LI AF NAAGLF++LGAEF+AMI +V
Sbjct: 1 MDVQAFFFTLFSTVMIVSAIMVIAARNPVHSVLFLILAFCNAAGLFVMLGAEFLAMILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF---SA 117
VYVGA+ V FLF++MMLD+D + + IG + + V S
Sbjct: 61 VYVGAIAVLFLFVVMMLDVDFTEFKQGFLQYLPVGALIGAVVLVELFLVLGSWVAGSGSV 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + +N +G+VLYTQY Y + + +LL +MIGAIVL LRH+ +KRQDI+
Sbjct: 121 TAIATPVPPGMSNTMALGRVLYTQYLYLFQAAAMVLLTAMIGAIVLTLRHKVGVKRQDIA 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q P ++I + KV SG+G+
Sbjct: 181 AQNARTPVDAIEIRKVASGQGL 202
>gi|319794659|ref|YP_004156299.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Variovorax
paradoxus EPS]
gi|315597122|gb|ADU38188.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Variovorax
paradoxus EPS]
Length = 221
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 120/196 (61%), Gaps = 2/196 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++ FYLF+ + + ++F V+T RNP+Y+ L+ AF A+ ++LLL AEF+A+ ++
Sbjct: 1 MDVKTGLFYLFAAVLLFAAFRVITARNPVYAALYLVLAFFQASAIWLLLRAEFLAISLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI--VCASNFMVFSAE 118
VYVGAV+V FLF++MMLDI+++ + F + +G L A + V F + A
Sbjct: 61 VYVGAVMVLFLFVVMMLDINVDSLRQGFWKHFPLAAGVGALIALEMAAVLMGGFRLGEAP 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
++ +N +GK+LY++Y YPLEI+ ILL+++I AI L LR R+D K + S
Sbjct: 121 RAMAVTSPNTSNTMELGKLLYSEYLYPLEIAAVILLVAIIAAIALTLRTRKDSKYTNPSD 180
Query: 179 QLESNPDNSIVMVKVK 194
Q+ + + +V++
Sbjct: 181 QVRVKARDRVRIVQMP 196
>gi|315499799|ref|YP_004088602.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Asticcacaulis
excentricus CB 48]
gi|315417811|gb|ADU14451.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Asticcacaulis
excentricus CB 48]
Length = 202
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 126/200 (63%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M ++ FY+ + + ++S LV+T RNP++SV LI AF +AAGLF+L+GAEF+AM+ +VVY
Sbjct: 1 MLAIAFYILAAVTVVSGALVITARNPVHSVLFLILAFFSAAGLFVLMGAEFLAMLLVVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLD+D +GIL ++ S+ +
Sbjct: 61 VGAVAVLFLFVVMMLDVDFTKLRQGFANYLPIGMVVGILLLIELIMISSAVAQRGAAAGQ 120
Query: 123 RL---VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ +N+E IG+VLYT Y Y + SG +LL++MIGAIVL L+HR +KRQDI Q
Sbjct: 121 SPQVYGAEMSNIEAIGRVLYTDYVYVFQASGLVLLVAMIGAIVLTLQHRTYVKRQDIHTQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +++ +VKVK+G+GI
Sbjct: 181 VTRRRKDAVAIVKVKTGEGI 200
>gi|86749701|ref|YP_486197.1| NADH dehydrogenase subunit J [Rhodopseudomonas palustris HaA2]
gi|86572729|gb|ABD07286.1| NADH dehydrogenase (quinone) [Rhodopseudomonas palustris HaA2]
Length = 212
Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats.
Identities = 87/202 (43%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M M LFFYL++ AI ++ +VV RNP++S LI FVNAAG+F+L+GAEF+AMI +V
Sbjct: 1 MSMPVLFFYLYAGAAIAAAVMVVFARNPVHSALFLILVFVNAAGMFVLMGAEFLAMILIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--- 117
VYVGAV V FLF+IMMLD+D IG + ++ + V +
Sbjct: 61 VYVGAVAVLFLFVIMMLDVDFSRLREGFLEYLPFGLLIGFIFLAELLLLAGGWVITPTVT 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + + +N E +G VLYT+Y + +ISG ILL++MIGAIVL LRH++ +KRQ+IS
Sbjct: 121 KTITAPIPTDVSNTEALGLVLYTRYIHYFQISGVILLVAMIGAIVLTLRHKKSVKRQNIS 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
+Q + + ++ + KVK G+G+
Sbjct: 181 EQNARSKETAMAIRKVKPGQGL 202
>gi|261856541|ref|YP_003263824.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Halothiobacillus neapolitanus c2]
gi|261837010|gb|ACX96777.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Halothiobacillus neapolitanus c2]
Length = 219
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 67/197 (34%), Positives = 114/197 (57%), Gaps = 2/197 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY+F+ A+IS+ VVTV+NP+++ L+ F + ++L+ AEF+ ++ L+
Sbjct: 1 MTLYQFLFYVFASSAVISAIRVVTVKNPVHAALFLVLTFFTTSLTWILMEAEFLGIVLLL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAA--ELIVCASNFMVFSAE 118
VYVGAV+V FLF++MMLDI++ R F+ ++ ++ S+ +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLAPLREGFVRNLPVGVFVALVMVIELGLIVGSHAFGLANY 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ +N +G VLYT+Y YP EI+ FILL++++ AI L R R + Q+I +
Sbjct: 121 PAPTAAAAGTSNTLALGSVLYTEYVYPFEIAAFILLVAIVAAISLAHRKREGVLYQNIDQ 180
Query: 179 QLESNPDNSIVMVKVKS 195
Q++ N D+ + MVK+ S
Sbjct: 181 QVKVNRDDRVRMVKMVS 197
>gi|197105258|ref|YP_002130635.1| NADH dehydrogenase I, J subunit [Phenylobacterium zucineum HLK1]
gi|196478678|gb|ACG78206.1| NADH dehydrogenase I, J subunit [Phenylobacterium zucineum HLK1]
Length = 207
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 81/205 (39%), Positives = 122/205 (59%), Gaps = 6/205 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q++ FYL + + + + F VV+ RNP++SV LI AF +AAGLF+L+GAEF+AM+ +V
Sbjct: 1 MALQAIAFYLMAAVTVSAGFGVVSARNPVHSVLWLILAFFSAAGLFVLMGAEFLAMLLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D R I + A ++ S +
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFTALRQGFARYMPVGLLIAAVLAVEMIVVSTTVATRGAAR 120
Query: 121 LSRLV------FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ N E IG+VLYT Y Y + +G +LL++MIGAIVL LRH+ +KRQ
Sbjct: 121 ANETPMAAGQGADVTNAEAIGRVLYTDYVYFFQAAGLVLLVAMIGAIVLTLRHKPGVKRQ 180
Query: 175 DISKQLESNPDNSIVMVKVKSGKGI 199
++ Q+ +P + +V +K G+G+
Sbjct: 181 LVADQVLRSPKTGMRVVSLKPGEGV 205
>gi|289207902|ref|YP_003459968.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thioalkalivibrio sp. K90mix]
gi|288943533|gb|ADC71232.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thioalkalivibrio sp. K90mix]
Length = 217
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 2/197 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FYLF + + + +++VRNP+++ L+ FV AA ++LL AEF+ ++ ++
Sbjct: 1 MTFELILFYLFGAILLGGALAMISVRNPVHAALFLVLCFVAAAAVWLLAEAEFLGIVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI++ + + A ++V + E
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLAKLREGFTEYLPVGIVVAVAMATVLVAVITRYITMDVPE 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + N E +G +LYT+Y YP EI+ ILL+++I AI L +R R D K D +Q+
Sbjct: 121 RAGP--EYANTEALGAILYTEYVYPFEIAAVILLVAIIAAISLTMRKRPDNKSIDPGQQM 178
Query: 181 ESNPDNSIVMVKVKSGK 197
+ + + MV + S K
Sbjct: 179 AVSREGRVRMVSMASEK 195
>gi|294011318|ref|YP_003544778.1| NADH dehydrogenase I chain J [Sphingobium japonicum UT26S]
gi|292674648|dbj|BAI96166.1| NADH dehydrogenase I chain J [Sphingobium japonicum UT26S]
Length = 203
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + FYLF+ + + S L + RNP++SV LI AF NAAGL +LLGAEF+AM+ ++V
Sbjct: 1 MIHVIAFYLFAILVVSSGALTILSRNPVHSVLWLIMAFFNAAGLMVLLGAEFIAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA---E 118
YVGAV V FLF++MMLDID I ++ IV
Sbjct: 61 YVGAVAVLFLFVVMMLDIDFAELRAGFVDYLPFGLLIALVLLAEIVLGIGLWSAGPIELA 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + + +N++ IG +LYT+Y + E +G +LL++MIGAIVL R R ++ Q+++K
Sbjct: 121 QRAAPVNPELSNIQAIGALLYTRYIFLFEAAGIVLLVAMIGAIVLTHRARGGVRGQNVAK 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q P++++ V G+G+
Sbjct: 181 QNRRRPEDAVRNVNQPVGQGV 201
>gi|330813991|ref|YP_004358230.1| NADH-ubiquinone oxidoreductase chain J [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487086|gb|AEA81491.1| NADH-ubiquinone oxidoreductase chain J [Candidatus Pelagibacter sp.
IMCC9063]
Length = 205
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 122/201 (60%), Gaps = 2/201 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ S+ FY FSF+ I SS +V+ +N +++VF LI FV+ + LF+++GAEF+ M+TL+
Sbjct: 1 MLAHSIIFYFFSFITIASSLMVIASKNTVHAVFFLILDFVSISSLFIMMGAEFLGMLTLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MM++++ + IG++ + + +
Sbjct: 61 VYVGAVAVLFLFVVMMINVNFSELKSGFLEYIPFGLLIGLVILLELGMMIATWKYKPDFV 120
Query: 121 LSRLVFK--GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
S + N E++G V+YT Y + ++SGFILL++MIGAIVL R + ++RQDI+
Sbjct: 121 PSNTIINKTITNTESLGLVIYTDYIFFFQLSGFILLVAMIGAIVLTFRRKESLRRQDITT 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ +S+ +V+VK +G+
Sbjct: 181 QVSRERTDSVELVEVKHSEGV 201
>gi|254501714|ref|ZP_05113865.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Labrenzia alexandrii DFL-11]
gi|222437785|gb|EEE44464.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Labrenzia alexandrii DFL-11]
Length = 204
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 134/204 (65%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++++LFFYLF+ + + S+F+V+ RNP+ SV LI AFVN+AGLF+LLGAE++A++ +V
Sbjct: 1 MILKALFFYLFAGVTVASAFMVIAARNPVTSVLFLILAFVNSAGLFILLGAEYLALLLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF----- 115
VYVGAV V FLF++MMLD+D + +G++ ++ V
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFVELRQGFLQYLPVGGLVGLILLVELLMGFGAWVILPELT 120
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ E + + + N+E +G VLYT+Y Y +++G ILL++MIGAIVL LRH+ ++KRQD
Sbjct: 121 ANTVEPTPPLTEMTNIEALGSVLYTKYIYFFQVAGLILLVAMIGAIVLTLRHKPNVKRQD 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I Q+ + ++ + KV++GKGI
Sbjct: 181 IPTQVGRTREAAVEVRKVETGKGI 204
>gi|294677070|ref|YP_003577685.1| NADH-quinone oxidoreductase subunit J [Rhodobacter capsulatus SB
1003]
gi|1709410|sp|P50975|NUOJ_RHOCA RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|3282575|gb|AAC25001.1| NUOJ [Rhodobacter capsulatus]
gi|294475890|gb|ADE85278.1| NADH-quinone oxidoreductase, J subunit [Rhodobacter capsulatus SB
1003]
gi|1586524|prf||2204231E NADH ubiquinone oxidoreductase
Length = 202
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 80/202 (39%), Positives = 122/202 (60%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FYLF+ +A+++ +VV +NP+++V LI F++AAGLF+L+GAEFVAM+ ++
Sbjct: 1 MTVFVFAFYLFAVVAVVAGLMVVLSKNPVHAVLWLILTFLSAAGLFVLMGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID + R I ++ + +
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFAALRGQLVRYAPVGGLIALVMLAQLATGLMVWNTADAAN 120
Query: 121 LSRLVFKGNNVEN---IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
R VEN +G +LY +Y Y + +G +LL++MIGAI+L LRHR DIKRQ++
Sbjct: 121 GLRAAPAPEGVENTAALGMILYDRYLYLFQGAGLVLLVAMIGAILLTLRHRTDIKRQNVL 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ +P ++ MV VK G+G+
Sbjct: 181 AQMHRDPAKALEMVDVKPGQGL 202
>gi|255067293|ref|ZP_05319148.1| NADH dehydrogenase, J subunit [Neisseria sicca ATCC 29256]
gi|255048444|gb|EET43908.1| NADH dehydrogenase, J subunit [Neisseria sicca ATCC 29256]
Length = 223
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT+Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDVPADYNNIRDLGSRIYTEYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|329850719|ref|ZP_08265564.1| NADH-quinone oxidoreductase subunit J [Asticcacaulis biprosthecum
C19]
gi|328841034|gb|EGF90605.1| NADH-quinone oxidoreductase subunit J [Asticcacaulis biprosthecum
C19]
Length = 204
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 84/202 (41%), Positives = 122/202 (60%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FYL + + +++ LVVT RNP++SV LI AF +AAGLF+LLGAEF+AM+ +V
Sbjct: 1 MTLMAIAFYLMAAVTLVAGLLVVTARNPVHSVLYLILAFFSAAGLFVLLGAEFLAMLLIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + + A ++ +
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFIKLRQGFANYLAPGAVVAGILAFELIFVGWAVAGRGAAA 120
Query: 121 LSRLV---FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ N++ IG LYT YAY E +GF+LL++MIGAIVL LRHR +KRQDI
Sbjct: 121 GNAPQAARPDATNIQTIGLELYTTYAYVFEAAGFVLLVAMIGAIVLTLRHRTYVKRQDIY 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
KQ+ +++ +V K+G+GI
Sbjct: 181 KQVTRRRKDAVAVVPAKTGEGI 202
>gi|220934171|ref|YP_002513070.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995481|gb|ACL72083.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thioalkalivibrio sp. HL-EbGR7]
Length = 197
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 62/196 (31%), Positives = 108/196 (55%), Gaps = 2/196 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY FS + + ++ ++TVRNP+++ L+ F +A L+++L AEF+ ++ ++
Sbjct: 1 MNFEAFLFYFFSVILVGAAVAMITVRNPVHAALFLVLTFFTSAALWIMLEAEFLGIVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI++ R + + ++ E
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLARMREGFIRFLPVGIVVAVAMVSVMTLVIVRHFHMEAPE 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ NN E +G++LYT+Y YP EI+ ILL++++ AI L +R R K D ++Q+
Sbjct: 121 RAGA--DYNNTEALGQILYTEYVYPFEIAAVILLVAIVAAIALTMRRRPGTKAIDPAQQV 178
Query: 181 ESNPDNSIVMVKVKSG 196
+ MV +KS
Sbjct: 179 RITRKGRVRMVDMKSE 194
>gi|221638939|ref|YP_002525201.1| NADH dehydrogenase subunit J [Rhodobacter sphaeroides KD131]
gi|221159720|gb|ACM00700.1| NADH dehydrogenase [Rhodobacter sphaeroides KD131]
Length = 199
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 121/198 (61%), Gaps = 5/198 (2%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY F+ A+ ++ +VVT RN +++V LI F+++AG+F+LLGAEFVAM+ ++VYVGAV
Sbjct: 2 AFYCFAVPAVFAALMVVTQRNMVHAVLWLILVFLSSAGMFVLLGAEFVAMLLVIVYVGAV 61
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV-----FSAEGEL 121
V FLF++MMLD+D E + R + +GI+ + V + +
Sbjct: 62 AVLFLFVVMMLDVDFEALKSEVVRYMPVAALMGIVILLQLSMGIGAWVTADGAPAMRQAV 121
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ + N +G ++Y +Y Y + +G ILL++M+GAI+L LR RRD+KRQ++ Q+
Sbjct: 122 TPDPNQIENSRALGLLIYDKYLYLFQTAGLILLVAMVGAILLTLRERRDVKRQNVLAQMW 181
Query: 182 SNPDNSIVMVKVKSGKGI 199
+P ++ + VK G+G+
Sbjct: 182 RDPAKAMELKDVKPGQGL 199
>gi|126729569|ref|ZP_01745382.1| NADH dehydrogenase subunit J [Sagittula stellata E-37]
gi|126709688|gb|EBA08741.1| NADH dehydrogenase subunit J [Sagittula stellata E-37]
Length = 200
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FYLF+ I V RNP++SV LI AF+++AGLF+L+GAEFVAM+ ++VY
Sbjct: 1 MMAFAFYLFALGVIAGGLFTVVSRNPVHSVLWLILAFLSSAGLFVLMGAEFVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE-- 120
VGAV V FLF++MMLD+D + R + IG++ + A S
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLVILMQLAMAFGVWEASDLAAGQ 120
Query: 121 -LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ N +G +LY +Y ++SG ILL++MIGAIVL LRHR+D+KRQD+ Q
Sbjct: 121 LSAPAPEGIENTAALGMILYDKYFLLFQLSGLILLVAMIGAIVLTLRHRQDVKRQDVLAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + V+ G+G+
Sbjct: 181 MYRDPAKAMELRDVRPGQGL 200
>gi|237746742|ref|ZP_04577222.1| predicted protein [Oxalobacter formigenes HOxBLS]
gi|229378093|gb|EEO28184.1| predicted protein [Oxalobacter formigenes HOxBLS]
Length = 220
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 62/196 (31%), Positives = 113/196 (57%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++ FY F+ + +++ VVT RNP+++V L+ +F A L++LL AEF+A+I L+
Sbjct: 1 MEFETVLFYAFAAILTLAALRVVTSRNPVHAVLYLVLSFFTGAALWILLKAEFLALILLL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MM+DI++ + ++ + F+G L + F+ +
Sbjct: 61 VYVGAVMVLFLFVVMMMDIELGELKRIARKNLALALFVGGLIVLEMSAVIFRGFFALDLH 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ IGK L+T Y + +EI+ ILL+++I A+ L +R R D + S +
Sbjct: 121 APDDASRIGLTSEIGKALFTDYLFSVEIAAIILLVALIAAVTLTIRRRSDARYTSASVAI 180
Query: 181 ESNPDNSIVMVKVKSG 196
P++ + +V++K+
Sbjct: 181 RVRPEDRLRVVEMKAE 196
>gi|71906597|ref|YP_284184.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Dechloromonas aromatica RCB]
gi|71846218|gb|AAZ45714.1| NADH dehydrogenase subunit J [Dechloromonas aromatica RCB]
Length = 198
Score = 137 bits (346), Expect = 6e-31, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 105/197 (53%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q+ FY S + + +S V+T RNP+++ LI AF G++ LL AEF+A+ ++
Sbjct: 1 MDFQTAVFYFLSAILVFASLRVITARNPVHAALHLILAFFTCGGIWALLQAEFLAIAIIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+I+ +G+L + F
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDRIREGFWNYLPLGALLGLLMVMEMGLVLGSKYFQVPAA 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + +N + IG ++++ Y YP E++ ILL+ MI AIVL R + K + ++Q+
Sbjct: 121 EAMVPAGVSNTKAIGALMFSDYVYPFELASLILLVGMIAAIVLTYRGPKKSKYTNPNQQV 180
Query: 181 ESNPDNSIVMVKVKSGK 197
+ + ++++ K
Sbjct: 181 FVKAKDRVRVLQMPVEK 197
>gi|300023444|ref|YP_003756055.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525265|gb|ADJ23734.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Hyphomicrobium denitrificans ATCC 51888]
Length = 216
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 82/204 (40%), Positives = 127/204 (62%), Gaps = 6/204 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ ++ FFYLF+ +A+ S +V+ RNP+++V L+ AF NAAGLFLLLGAEF+AM+ ++V
Sbjct: 1 MAEAGFFYLFAVLAVASGAMVILARNPVHAVLFLVLAFFNAAGLFLLLGAEFLAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V FLF++MMLD+D + + +G + +V +F FS +
Sbjct: 61 YVGAVSVIFLFVVMMLDVDFAELKAGFIKNAKIGAIVGGVVLAELVALFSFRGFSIAPTV 120
Query: 122 SRLVFKG------NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ N +G++LYT+Y Y + SG ILL++MIGAIVL L+HR ++KRQ
Sbjct: 121 NVAAPMPAAGSTLTNTAALGQILYTKYVYLFQASGMILLVAMIGAIVLTLKHRTNVKRQS 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I+ Q+ +P ++ +VKV +G +
Sbjct: 181 IAAQVSRDPAKTLEVVKVPTGGSV 204
>gi|218767057|ref|YP_002341569.1| NADH dehydrogenase I chain J [Neisseria meningitidis Z2491]
gi|121051065|emb|CAM07335.1| NADH dehydrogenase I chain J [Neisseria meningitidis Z2491]
Length = 223
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 65/200 (32%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + FY+F+ + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFQLILFYIFAVIILYGAIKTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTVNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|88812967|ref|ZP_01128210.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Nitrococcus
mobilis Nb-231]
gi|88789745|gb|EAR20869.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Nitrococcus
mobilis Nb-231]
Length = 202
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 111/200 (55%), Gaps = 4/200 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ L FY+F+ + + ++ +V+T +NP++S L+ AF N+A L+L+ AEF+ + ++V
Sbjct: 1 MIELLLFYVFAAVLLFAATMVITAKNPVHSALFLVLAFFNSAALWLMAEAEFLGIALVLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFSA 117
YVGAV+V FLF++MMLDI++ R +G + + +
Sbjct: 61 YVGAVMVLFLFVVMMLDINLAPMREGFARYLPIGALVGCVMVVEMALVVGSKDVNLIHGG 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +N + +G VLYT YAYP EI+ +LL++++ AI+L R R K+Q+I
Sbjct: 121 PVTSAAEGVGMSNTKALGSVLYTVYAYPFEIASVVLLVAIVAAIMLTHRRRPGTKQQNID 180
Query: 178 KQLESNPDNSIVMVKVKSGK 197
+Q+ + + +V + K
Sbjct: 181 RQVRVRKEQRLRIVTMAPEK 200
>gi|261379571|ref|ZP_05984144.1| NADH dehydrogenase, J subunit [Neisseria subflava NJ9703]
gi|284798045|gb|EFC53392.1| NADH dehydrogenase, J subunit [Neisseria subflava NJ9703]
Length = 223
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 110/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLDAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|298370370|ref|ZP_06981686.1| NADH dehydrogenase (ubiquinone), J subunit [Neisseria sp. oral
taxon 014 str. F0314]
gi|298281830|gb|EFI23319.1| NADH dehydrogenase (ubiquinone), J subunit [Neisseria sp. oral
taxon 014 str. F0314]
Length = 223
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELASVLLLLGMVAAIALVHRKTFNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|325131603|gb|EGC54310.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
M6190]
gi|325139142|gb|EGC61688.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
ES14902]
gi|325203368|gb|ADY98821.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
M01-240355]
Length = 223
Score = 137 bits (345), Expect = 7e-31, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTVNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|83311877|ref|YP_422141.1| NADH:ubiquinone oxidoreductase subunit 6 [Magnetospirillum
magneticum AMB-1]
gi|82946718|dbj|BAE51582.1| NADH:ubiquinone oxidoreductase subunit 6 [Magnetospirillum
magneticum AMB-1]
Length = 202
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 129/203 (63%), Gaps = 6/203 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +L FY+F+ +A+ S +V++ RNP++SV LI AF NAAGLFLLLGAEF+AM+ ++V
Sbjct: 1 MFTALIFYMFAAIAVASGVMVISSRNPVHSVLWLILAFFNAAGLFLLLGAEFLAMVLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE- 120
YVGAV V FLF++MMLDI++ + + IG++ ++ F+ + E
Sbjct: 61 YVGAVAVLFLFVVMMLDINMVEMKEGFLQYLPTGALIGLVLLVELLAMFGGWAFAPDVEA 120
Query: 121 ----LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + + +N +GK++YT Y Y + SG +LL++MIG I+L R R +++Q I
Sbjct: 121 MIKAPTPTLDQASNTVALGKLIYTNYVYLFQASGLVLLVAMIGTILLTHRKRTGVRKQVI 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
++Q+ + +S+ + KV+SG+GI
Sbjct: 181 AEQVNRSR-DSVELKKVQSGRGI 202
>gi|241760703|ref|ZP_04758795.1| NADH dehydrogenase i chain j [Neisseria flavescens SK114]
gi|241318884|gb|EER55410.1| NADH dehydrogenase i chain j [Neisseria flavescens SK114]
Length = 223
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|225077028|ref|ZP_03720227.1| hypothetical protein NEIFLAOT_02080 [Neisseria flavescens
NRL30031/H210]
gi|224951585|gb|EEG32794.1| hypothetical protein NEIFLAOT_02080 [Neisseria flavescens
NRL30031/H210]
gi|325129048|gb|EGC51898.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
N1568]
Length = 223
Score = 137 bits (345), Expect = 8e-31, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|254670966|emb|CBA07654.1| NADH-ubiquinone oxidoreductase, chain J [Neisseria meningitidis
alpha153]
Length = 223
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 64/200 (32%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + FY+F+ + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFQLILFYIFAVIILYGAIKTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTVNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|92117734|ref|YP_577463.1| NADH dehydrogenase subunit J [Nitrobacter hamburgensis X14]
gi|91800628|gb|ABE63003.1| NADH dehydrogenase subunit J [Nitrobacter hamburgensis X14]
Length = 212
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 84/202 (41%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++ +LFFYLF+ + + S+ +V++ RNP++SV LI AFVNAAGLF+L+GAEF+AMI +V
Sbjct: 1 MILPALFFYLFAGVCVASAAMVISSRNPVHSVLFLILAFVNAAGLFILMGAEFLAMILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--- 117
VYVGAV V FLF+IMMLD++ I + ++ +
Sbjct: 61 VYVGAVAVLFLFVIMMLDVNFAELREGFLEYLPLGLVIAAIFLLELLLVVGGWTLNPTVT 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + + +N E IG VLYT+Y + +++G +LL++M+GAIVL LRHR +KRQDI+
Sbjct: 121 KSITAAIPGDVSNTEAIGLVLYTKYIHYFQLAGMVLLVAMVGAIVLTLRHRASVKRQDIN 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q P+ ++ + KV SG+G+
Sbjct: 181 VQNARTPEMAMSVRKVASGRGL 202
>gi|261400481|ref|ZP_05986606.1| NADH dehydrogenase, J subunit [Neisseria lactamica ATCC 23970]
gi|269209740|gb|EEZ76195.1| NADH dehydrogenase, J subunit [Neisseria lactamica ATCC 23970]
Length = 223
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|30249728|ref|NP_841798.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosomonas
europaea ATCC 19718]
gi|30180765|emb|CAD85679.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosomonas
europaea ATCC 19718]
Length = 201
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 66/199 (33%), Positives = 119/199 (59%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q FY + + +I++ V+T+RNP++S L+ AFV ++GL+LLL AEF+A++ ++
Sbjct: 1 MNLQDFVFYSLASVVVIAALGVITLRNPVHSALLLVLAFVTSSGLWLLLEAEFLAIVLIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+++ + F + ++ I F E
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDRMREGFWKWFPFGAILALIMTGEIGIVLMSKQFGPENI 120
Query: 121 LSRL--VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ +N + +G++LYT Y Y E+S ILL++M+ AI + LR+R D K ++SK
Sbjct: 121 QIPVSKSVDYSNTKELGQLLYTDYVYAFELSAVILLVAMVAAIAITLRYRTDKKSSNVSK 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ ++ + + ++ + + +
Sbjct: 181 QVAASREKRLKVISIPAER 199
>gi|261364358|ref|ZP_05977241.1| NADH dehydrogenase, J subunit [Neisseria mucosa ATCC 25996]
gi|288567622|gb|EFC89182.1| NADH dehydrogenase, J subunit [Neisseria mucosa ATCC 25996]
Length = 223
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|254805705|ref|YP_003083926.1| NADH dehydrogenase I chain J [Neisseria meningitidis alpha14]
gi|254669247|emb|CBA08121.1| NADH dehydrogenase I chain J [Neisseria meningitidis alpha14]
Length = 223
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|15676177|ref|NP_273309.1| NADH dehydrogenase I chain J [Neisseria meningitidis MC58]
gi|7225476|gb|AAF40707.1| NADH dehydrogenase I, J subunit [Neisseria meningitidis MC58]
gi|316985181|gb|EFV64133.1| NADH-quinone oxidoreductase subunit J [Neisseria meningitidis
H44/76]
gi|325135056|gb|EGC57684.1| NADH-quinone oxidoreductase subunit J [Neisseria meningitidis
M13399]
gi|325141089|gb|EGC63592.1| NADH dehydrogenase i, j subunit [Neisseria meningitidis CU385]
gi|325145246|gb|EGC67525.1| NADH dehydrogenase i, j subunit [Neisseria meningitidis M01-240013]
gi|325145317|gb|EGC67595.1| NADH dehydrogenase i, j subunit [Neisseria meningitidis M01-240013]
gi|325199456|gb|ADY94911.1| NADH-quinone oxidoreductase subunit J [Neisseria meningitidis
H44/76]
Length = 223
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/200 (32%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + FY+F+ + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFQLILFYIFAVIILYGALKTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTVNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|313669275|ref|YP_004049559.1| NADH dehydrogenase I chain J [Neisseria lactamica ST-640]
gi|313006737|emb|CBN88207.1| NADH dehydrogenase I chain J [Neisseria lactamica 020-06]
Length = 223
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|117926900|ref|YP_867517.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Magnetococcus sp. MC-1]
gi|117610656|gb|ABK46111.1| NADH dehydrogenase subunit J [Magnetococcus sp. MC-1]
Length = 196
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 70/197 (35%), Positives = 119/197 (60%), Gaps = 2/197 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + FYL + + ++++ V+T +NP+ SV L+ AF AAGLFLL+ AEF+A+I ++V
Sbjct: 1 MLVDVVFYLLAAIMLVAALRVITAKNPVSSVMFLVLAFFTAAGLFLLIEAEFLAVILVMV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+GAV + FLF++MMLD+D + + +G + ++ + G
Sbjct: 61 YMGAVAILFLFVVMMLDVDFALLRQGARDHLPLGIAVGAVVLFEFAAVASSIHPEQHG-- 118
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ + NN IGK+LYT+Y +P E++ ILL+++IGA+ L R R +++ Q+I Q+
Sbjct: 119 AVVGENVNNTLEIGKILYTKYLFPFEVASLILLVALIGAVALAHRKRNNVRTQNIPDQIA 178
Query: 182 SNPDNSIVMVKVKSGKG 198
D S+ + KVKSG+G
Sbjct: 179 RTRDESVALKKVKSGEG 195
>gi|163793196|ref|ZP_02187172.1| NADH dehydrogenase subunit I [alpha proteobacterium BAL199]
gi|159181842|gb|EDP66354.1| NADH dehydrogenase subunit I [alpha proteobacterium BAL199]
Length = 204
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 125/204 (61%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV+Q+L FYLF+ +A+ S +V+T RNP++SV LI AF NAAGLF+L+GAEF+AMI +V
Sbjct: 1 MVVQALVFYLFAAVAVASGAMVITSRNPVHSVLFLILAFFNAAGLFVLMGAEFLAMILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM-----VF 115
VYVGAV V FLF++MMLDI+ R IG++ ++ + +
Sbjct: 61 VYVGAVAVLFLFVVMMLDINFVELRQGFIRYVPVGAAIGLVLLAELLLITGAWTVAPGIP 120
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+A G + N +G +LYT+Y Y + +G ILL++MIGAIVL LR R ++RQ
Sbjct: 121 NAMGAVIPPAADVTNTHALGGLLYTRYVYLFQAAGLILLIAMIGAIVLTLRSREGVRRQS 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I Q ++++ ++KV G G+
Sbjct: 181 ILVQNARRREDAVEVMKVTRGGGV 204
>gi|153871401|ref|ZP_02000582.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Beggiatoa
sp. PS]
gi|152072135|gb|EDN69420.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Beggiatoa
sp. PS]
Length = 195
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 70/194 (36%), Positives = 108/194 (55%), Gaps = 2/194 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ + I ++ V+TV+NP+++ L+ AF ++A ++LLL AEF+A+ ++VY
Sbjct: 1 MIKFIFYLFALILIFAASRVITVKNPVHAALFLVLAFFSSAAIWLLLQAEFLAIALILVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV+V FLF++MMLDI+ R + +G L +V +
Sbjct: 61 VGAVMVLFLFVVMMLDINFTQLREGFVRHLPIAGIVGALILLEMVLVVG--TWHQVPIPE 118
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
N E +G+VLYT+Y YP EI+ ILL++MI AI L LR RR K Q +Q+
Sbjct: 119 IAADALPNTEALGQVLYTEYVYPFEIAAVILLVAMIAAIALTLRPRRQTKTQKPEQQVNV 178
Query: 183 NPDNSIVMVKVKSG 196
+ +VK+ +
Sbjct: 179 RRSERVRLVKMPAE 192
>gi|307293261|ref|ZP_07573107.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sphingobium
chlorophenolicum L-1]
gi|306881327|gb|EFN12543.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sphingobium
chlorophenolicum L-1]
Length = 203
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 114/201 (56%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ L FYLF+ + + S L + RNP++SV LI AF NAAGL +LLGAEF+AM+ ++V
Sbjct: 1 MIHVLAFYLFAILVVSSGALTILSRNPVHSVLWLIMAFFNAAGLMVLLGAEFIAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA---E 118
YVGAV V FLF++MMLDID I + IV
Sbjct: 61 YVGAVAVLFLFVVMMLDIDFAELRAGFVNYLPFGLLIAFVLLAEIVLGIGLWSAGPIELA 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + + +N++ IG +LYT+Y + E +G +LL++MIGAIVL R R ++ Q+++K
Sbjct: 121 QRAAPVNPELSNIQAIGGLLYTRYIFLFEAAGIVLLVAMIGAIVLTHRARGGVRGQNVAK 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q P +++ V G+G+
Sbjct: 181 QNRRRPQDAVRNVNQPVGQGV 201
>gi|254486921|ref|ZP_05100126.1| NADH-quinone oxidoreductase chain j [Roseobacter sp. GAI101]
gi|214043790|gb|EEB84428.1| NADH-quinone oxidoreductase chain j [Roseobacter sp. GAI101]
Length = 200
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 82/200 (41%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ I V RNP++SV LI AF++AAGLF++L AEFVAM+ ++VY
Sbjct: 1 MSVFAFYLFATCLIAGGLFTVISRNPVHSVLWLILAFLSAAGLFVMLNAEFVAMLLIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLD+D + R + IG++ V A + E
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLIILMQFVMAFGAWDANVAAEGL 120
Query: 123 R---LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
R + N +G +LY +Y ++SG ILL++MIGAIVL LRHR D+KRQD+ Q
Sbjct: 121 RAHVVTDDVQNTAALGLILYDEYFLLFQLSGLILLVAMIGAIVLTLRHRPDVKRQDVVAQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MMRDPKLAMKLNDVKPGQGL 200
>gi|145589225|ref|YP_001155822.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047631|gb|ABP34258.1| NADH dehydrogenase subunit J [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 215
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 71/196 (36%), Positives = 121/196 (61%), Gaps = 2/196 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ ++FFY F+ + +IS+ V+T RNP+++ L+ AF A+GL++LL AEF+++ ++V
Sbjct: 7 TLFAVFFYGFAGLLVISALRVITARNPVHAALFLVLAFFCASGLWMLLKAEFLSLALILV 66
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG--ILAAELIVCASNFMVFSAEG 119
YVGAV+V FLF++MMLD+DIE K+ +F +G I+ IV +F+
Sbjct: 67 YVGAVMVLFLFVVMMLDLDIEHLRRDFKKFLPVAFLMGTVIVLELSIVIIRSFIGTDTPV 126
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ NN + +G +++ Y Y EI+G ILL+++I A+ L LR+R+D K Q+I +Q
Sbjct: 127 QPMPEEMMANNTQALGMLIFVDYVYAFEIAGVILLVAIIAAVALTLRNRKDSKSQNIHEQ 186
Query: 180 LESNPDNSIVMVKVKS 195
+ + + +VK+ S
Sbjct: 187 VNVVAADRMRIVKMDS 202
>gi|111220508|ref|YP_711302.1| NADH dehydrogenase subunit J [Frankia alni ACN14a]
gi|111148040|emb|CAJ59706.1| NADH dehydrogenase (quinone) [Frankia alni ACN14a]
Length = 358
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 97/199 (48%), Gaps = 2/199 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ F++ + +A++++ +V VR+ ++ L+ A +L+ A F+ + ++V
Sbjct: 18 TGEATVFWILAPIAVLAALGMVFVRSAVHCALLLVANLFCVAVFYLVQQAPFLGFVQIIV 77
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL-GSFFIGILAAELIVCASNFMVFSAEGE 120
Y GA++V FLF++M++ +D + RG G+ G+ A L+V + +
Sbjct: 78 YAGAIMVLFLFVLMLVGVDSSDSLVETIRGQRLGAAIFGLGFAGLLVFPIGSAIDGETAK 137
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+G NV+ IG++L++ Y + E +L+++ IG +VL R R R D +++
Sbjct: 138 GLDTPNEGGNVQAIGRLLFSDYVFVFEAVSALLVVAAIGTMVLGHREREGG-RVDQRERM 196
Query: 181 ESNPDNSIVMVKVKSGKGI 199
+ G G+
Sbjct: 197 RRRFAEPGRQLTPLPGPGV 215
>gi|325143092|gb|EGC65439.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
961-5945]
gi|325143162|gb|EGC65508.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
961-5945]
gi|325197537|gb|ADY92993.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
G2136]
Length = 223
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTVNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|257095310|ref|YP_003168951.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047834|gb|ACV37022.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 200
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 60/198 (30%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY S + + + V+T RNP+++ L+ AF A+G+++LL AEF+AM ++
Sbjct: 1 MEFKTFVFYFLSAILVFAGLRVITARNPVHAALFLVLAFFTASGVWILLQAEFLAMALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL-GSFFIGILAAELIVCASNFMVFSAEG 119
VYVGAV+V FLF++MMLDI+++ GS ++ AE+ + + E
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDRLREGFWSYLPLGSIIALLMVAEMGLVLGGNYLGLFES 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ + +NV+ +G++++T+Y YP E++ ILL+ ++ A+ L R +R K + S+Q
Sbjct: 121 SVRQTGADESNVQAVGRLMFTEYVYPFELASVILLVGIVAAVALTQRGKRKNKAVNPSQQ 180
Query: 180 LESNPDNSIVMVKVKSGK 197
+ + ++++ + K
Sbjct: 181 VFVKAGERVRVLQMPAEK 198
>gi|296313737|ref|ZP_06863678.1| NADH dehydrogenase, J subunit [Neisseria polysaccharea ATCC 43768]
gi|296839660|gb|EFH23598.1| NADH dehydrogenase, J subunit [Neisseria polysaccharea ATCC 43768]
Length = 223
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|254496131|ref|ZP_05109030.1| NADH dehydrogenase I, J subunit [Legionella drancourtii LLAP12]
gi|254354672|gb|EET13308.1| NADH dehydrogenase I, J subunit [Legionella drancourtii LLAP12]
Length = 219
Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 20/211 (9%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ + + S+ +V+T NP+ V L+ F ++ L++L AEF+A+I ++VYVGAV
Sbjct: 9 IFYVFAALTVGSALMVITQNNPVRCVLFLVLTFFTSSVLWILAEAEFLALILVLVYVGAV 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV- 125
+ FLF++MML+IDIE KR + L L++ A+ F E +
Sbjct: 69 MTLFLFVVMMLNIDIESMRGHFKRYLPFGLILVALLTGLLMVATPAGTFKDNVERQQNAG 128
Query: 126 -------------------FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +N E +G VLYT Y E++ +LL++++ AI L+ R
Sbjct: 129 QPILIQQGRTSELKTEPQLIEMSNTEALGMVLYTDYFLAFELAAVLLLVAIVSAITLVHR 188
Query: 167 HRRDIKRQDISKQLESNPDNSIVMVKVKSGK 197
R KRQDI +Q+ + D + +V +K+ K
Sbjct: 189 GPRQSKRQDIKQQIMTRRDERVKLVSMKAEK 219
>gi|148255904|ref|YP_001240489.1| NADH dehydrogenase subunit J [Bradyrhizobium sp. BTAi1]
gi|146408077|gb|ABQ36583.1| NADH dehydrogenase subunit J [Bradyrhizobium sp. BTAi1]
Length = 212
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++ +LFFYLF+ + + S+ +V+ +NP++SV LI AFVNA+GLF+L+GAEF+AMI +V
Sbjct: 1 MILPALFFYLFAAVCVASAVMVIVSKNPVHSVLYLILAFVNASGLFVLMGAEFLAMILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF+IMMLD+D + IG + ++ ++ V +
Sbjct: 61 VYVGAVAVLFLFVIMMLDVDFTELREGFLQYMPIGLVIGGIFLFELLLTVSYWVINPTTP 120
Query: 121 L---SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + N E +G VLYT+Y + ++SG ILL++MIGAIVL LRH+ +KRQDI+
Sbjct: 121 KAITAAIPTNVTNTEALGLVLYTKYIHYFQLSGMILLVAMIGAIVLTLRHKVSVKRQDIN 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q P+ ++ + KV G+G+
Sbjct: 181 VQNARTPEMAMAVRKVAVGQGL 202
>gi|304389076|ref|ZP_07371120.1| NADH-quinone oxidoreductase subunit J [Neisseria meningitidis ATCC
13091]
gi|304336949|gb|EFM03139.1| NADH-quinone oxidoreductase subunit J [Neisseria meningitidis ATCC
13091]
Length = 223
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ +I L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVASIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|261378530|ref|ZP_05983103.1| NADH dehydrogenase, J subunit [Neisseria cinerea ATCC 14685]
gi|269145080|gb|EEZ71498.1| NADH dehydrogenase, J subunit [Neisseria cinerea ATCC 14685]
Length = 223
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|261391784|emb|CAX49239.1| NADH-quinone oxidoreductase chain J (NADH dehydrogenase I, chain J;
NDH-1, chain J) [Neisseria meningitidis 8013]
Length = 223
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|124266605|ref|YP_001020609.1| NADH-ubiquinone oxidoreductase, subunit J [Methylibium
petroleiphilum PM1]
gi|124259380|gb|ABM94374.1| NADH-ubiquinone oxidoreductase, chain J [Methylibium petroleiphilum
PM1]
Length = 215
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 70/194 (36%), Positives = 116/194 (59%), Gaps = 1/194 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +S FY+FS + + +SF V+T R+ +Y+ L+ AF NAA +++LL AEF+A+ ++
Sbjct: 1 MNTESALFYVFSAILLFASFRVITARSAVYAALYLVLAFFNAACVWMLLEAEFLAISLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAEG 119
VYVGAV+V FLF++MMLD + + + F + IG ++AAE+I
Sbjct: 61 VYVGAVMVLFLFVVMMLDANADTVRKGFWQLFPVAGTIGAVIAAEMIWVLRRGFDLPEAP 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
L + + N + +G +YT Y YPL+I+ +LL+++I AI L LR R+D K D S Q
Sbjct: 121 PLDAVAAQMGNTKLLGIEIYTHYLYPLQIAAVLLLVAIIAAIALTLRKRKDSKYVDPSAQ 180
Query: 180 LESNPDNSIVMVKV 193
++ + + +V++
Sbjct: 181 VKVRKADRVRIVQM 194
>gi|241763297|ref|ZP_04761354.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Acidovorax
delafieldii 2AN]
gi|241367572|gb|EER61859.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Acidovorax
delafieldii 2AN]
Length = 222
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 77/200 (38%), Positives = 119/200 (59%), Gaps = 8/200 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F V+T RNP+++V LI AF AA ++LLL AEF+A++ ++
Sbjct: 1 MDAKTGFFYLFSVVLLFAAFRVITARNPVHAVLHLILAFSQAAAIWLLLKAEFLAIVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+GAV+V FLF++MMLDI I+ + F + FIG + A + +
Sbjct: 61 VYLGAVMVLFLFVVMMLDIHIDTIRKGFWKHFPLAAFIGAMIALEMAAVLMGGFRGLDEP 120
Query: 121 LSRL--------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ V +N + +GK+LYT+Y YP+EI+ ILL++MI AI L LR R+D K
Sbjct: 121 KAAAVVLDAAGQVVPYSNAKALGKLLYTEYLYPVEIAAVILLVAMIAAIALTLRQRKDTK 180
Query: 173 RQDISKQLESNPDNSIVMVK 192
D S Q+ + + +VK
Sbjct: 181 AIDPSSQIRVRAKDRLQVVK 200
>gi|121634123|ref|YP_974368.1| NADH dehydrogenase I chain J [Neisseria meningitidis FAM18]
gi|120865829|emb|CAM09561.1| NADH dehydrogenase I chain J [Neisseria meningitidis FAM18]
Length = 223
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGALRTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR + +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTVNPKRMEPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|238028134|ref|YP_002912365.1| NADH dehydrogenase subunit J [Burkholderia glumae BGR1]
gi|237877328|gb|ACR29661.1| Hypothetical protein bglu_1g25850 [Burkholderia glumae BGR1]
Length = 220
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 119/201 (59%), Gaps = 4/201 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+FS + +IS+ V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MDFTTVLFYIFSLLLVISALKVITARNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILA----AELIVCASNFMVFS 116
VYVGAV+V FLF++MMLDI+++V +R + +G + A ++
Sbjct: 61 VYVGAVMVLFLFVVMMLDINVDVLRRDFRRFVPMATVVGAIIVVETALILWRGYGATASP 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
S + +N IGKV+YT Y + EI+G +LL+++I A+ L + KRQ++
Sbjct: 121 VRDVASGALANMSNTRLIGKVIYTDYIFAFEIAGLVLLVAIIAAVSLTAGKGKYRKRQNV 180
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
S+Q+ ++ + +VK+ + K
Sbjct: 181 SEQIRVRREDRVRLVKMAAEK 201
>gi|319411264|emb|CBY91671.1| NADH-quinone oxidoreductase chain J (NADH dehydrogenase I, chain J;
NDH-1, chain J) [Neisseria meningitidis WUE 2594]
Length = 223
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/200 (32%), Positives = 112/200 (56%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + FY+F+ + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFQLILFYIFAVIILYGAIKTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTVNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|198284337|ref|YP_002220658.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666659|ref|YP_002426999.1| NADH-quinone oxidoreductase, J subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198248858|gb|ACH84451.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518872|gb|ACK79458.1| NADH-quinone oxidoreductase, J subunit [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 198
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 71/192 (36%), Positives = 111/192 (57%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ FY+FS + + S+ LV+T RNP+Y+ L+ AF NAA LF+LLGAEF+ +I ++VY
Sbjct: 4 VTTILFYIFSAILLGSATLVITARNPVYATLYLVLAFFNAAALFILLGAEFLGLILILVY 63
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV+V FLF++MMLDI++ + I IL + +
Sbjct: 64 VGAVMVLFLFVVMMLDINLARIKEGFLSYLPLGLAIAILGVLELAVVFWTSSLGHIPAPA 123
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
L +N +G +LYT+Y YP EI+ ILL+++I AI L LR R K Q+I+ Q+
Sbjct: 124 ALPADTDNTRALGILLYTKYLYPFEIAAVILLVAIIAAIALTLRRRTGTKTQNIAAQMAV 183
Query: 183 NPDNSIVMVKVK 194
+ + +V ++
Sbjct: 184 RAKDRVQLVDLR 195
>gi|83942658|ref|ZP_00955119.1| NADH dehydrogenase I, J subunit [Sulfitobacter sp. EE-36]
gi|83953897|ref|ZP_00962618.1| NADH dehydrogenase subunit J [Sulfitobacter sp. NAS-14.1]
gi|83841842|gb|EAP81011.1| NADH dehydrogenase subunit J [Sulfitobacter sp. NAS-14.1]
gi|83846751|gb|EAP84627.1| NADH dehydrogenase I, J subunit [Sulfitobacter sp. EE-36]
Length = 200
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 81/200 (40%), Positives = 119/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FYLF+ I V RNP++SV LI +F++AAGLF+LL AEFVAM+ ++VY
Sbjct: 1 MSVFAFYLFAISVIAGGLFTVISRNPVHSVLWLILSFLSAAGLFVLLNAEFVAMLLIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE-- 120
VGAV V FLF++MMLD+D + R + IG++ V A ++ E
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKAEMARYMPLALLIGLVILMQFVMAFGAWDANSAAEGL 120
Query: 121 -LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ + +N +G +LY QY ++SG ILL++MIGAIVL LRHR D+KRQ++ Q
Sbjct: 121 RTQVITDEVHNTAALGLILYDQYFLLFQLSGLILLVAMIGAIVLTLRHRADVKRQNVVDQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P ++ + VK G+G+
Sbjct: 181 MMRDPKLAMKLNDVKPGQGL 200
>gi|316933902|ref|YP_004108884.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Rhodopseudomonas palustris DX-1]
gi|315601616|gb|ADU44151.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Rhodopseudomonas palustris DX-1]
Length = 212
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M M LFFYL++ +AI ++ +VV RNP++S LI FVNAAG+F+L+GAEF+AMI +V
Sbjct: 1 MSMPVLFFYLYAGVAIAAAVMVVFARNPVHSALFLILVFVNAAGMFVLMGAEFLAMILIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--- 117
VYVGAV V FLF+IMMLD+D IG++ ++ + V S
Sbjct: 61 VYVGAVAVLFLFVIMMLDVDYSELREGFLEYLPFGLLIGVIFLAELLLLAGGWVISPTVT 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + + +N E +G VLYT+Y + ++SG ILL++M+GAIVL LRH++ +KRQDI+
Sbjct: 121 KTVTAPIPADVSNTEALGLVLYTRYIHYFQVSGMILLVAMVGAIVLTLRHKKKVKRQDIA 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q + + ++ + VK+G+G+
Sbjct: 181 AQNARSKETAMAIRHVKTGQGL 202
>gi|325130979|gb|EGC53706.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
OX99.30304]
gi|325205337|gb|ADZ00790.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
M04-240196]
Length = 223
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ +I L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVASIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|312796892|ref|YP_004029814.1| NADH-quinone oxidoreductase chain J [Burkholderia rhizoxinica HKI
454]
gi|312168667|emb|CBW75670.1| NADH-quinone oxidoreductase chain J (EC 1.6.5.3) [Burkholderia
rhizoxinica HKI 454]
Length = 265
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 108/188 (57%), Gaps = 9/188 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + +S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 36 MEFTTVLFYIFALLMTVSGLKVITARNPVSSALFLVLAFFNAAAIWMLLEAEFLAILLVL 95
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+++V +R + +G + +
Sbjct: 96 VYVGAVMVLFLFVVMMLDINLDVLRRDFRRFVPVATIVGAIIVIETALILWHGYGATVSP 155
Query: 121 LSRLVFKG---------NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ V +N IG+++Y+ Y + E++G +LL++++ A+ L +R +D+
Sbjct: 156 VHDAVQATQAAGAGGALSNTRMIGRIIYSDYIFAFEVAGLVLLVAIVAALALTIRDGKDV 215
Query: 172 KRQDISKQ 179
KRQ +S+Q
Sbjct: 216 KRQRVSEQ 223
>gi|302383059|ref|YP_003818882.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brevundimonas
subvibrioides ATCC 15264]
gi|302193687|gb|ADL01259.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brevundimonas
subvibrioides ATCC 15264]
Length = 208
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 83/202 (41%), Positives = 121/202 (59%), Gaps = 4/202 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q + FYL S +A++S LVVT RNP++SV LI AF ++AGLF+LLGAEF+AM+ +VV
Sbjct: 1 MLQGIAFYLLSAVAVVSGLLVVTARNPVHSVLWLILAFFSSAGLFVLLGAEFLAMLLVVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV----FSA 117
YVGAV V FLF++MMLD+D + + + +V S +V S
Sbjct: 61 YVGAVAVLFLFVVMMLDVDFVRLREGYATYLPLAAIVAGVLLAEMVMISIVVVQGGAASD 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ +NVE IG+VLYT Y Y + +G +LL++MIGAIVL LR + ++RQD
Sbjct: 121 AVAPAVATADASNVETIGRVLYTDYIYFFQAAGIVLLIAMIGAIVLTLRKKPSVRRQDPG 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q + S+ + V +G G+
Sbjct: 181 AQTNRDRKTSVEIKGVVTGAGV 202
>gi|161870813|ref|YP_001599986.1| NADH dehydrogenase I chain J [Neisseria meningitidis 053442]
gi|161596366|gb|ABX74026.1| NADH dehydrogenase I chain J [Neisseria meningitidis 053442]
Length = 223
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSTILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTNLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTVNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|294083720|ref|YP_003550477.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663292|gb|ADE38393.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 201
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 81/196 (41%), Positives = 122/196 (62%), Gaps = 2/196 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ ++LFFYLF+ + + S+F+VV +NP+YSV LI +F NAAGLF+L+GAEF+AM+ +VV
Sbjct: 1 MFEALFFYLFAGIMLASAFMVVISKNPVYSVLFLILSFFNAAGLFVLIGAEFLAMLLVVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V FLF++MMLDI+ ++ +G + +V A F +G
Sbjct: 61 YVGAVAVLFLFVVMMLDINFAEMRAGFQKYLPLGLIVGGILVFELVAAMYGDAF--KGAT 118
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ N +G VLYT+Y Y +++G ILL++MIGAI L +RHR ++RQ ++ Q
Sbjct: 119 LPEASEIPNTTRLGGVLYTKYIYLFQVAGLILLVAMIGAISLTMRHRPGVRRQVVANQNM 178
Query: 182 SNPDNSIVMVKVKSGK 197
D ++ +V V GK
Sbjct: 179 RRRDETVEVVSVPVGK 194
>gi|298291837|ref|YP_003693776.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Starkeya
novella DSM 506]
gi|296928348|gb|ADH89157.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Starkeya
novella DSM 506]
Length = 201
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 85/201 (42%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + +LFFYLF+ +A+ S+F+V+ RNP++SV LI FVNA+GLF+L+GAE++AM+ +V
Sbjct: 1 MSLAALFFYLFAGVAVASAFMVIASRNPVHSVLFLILTFVNASGLFILIGAEYLAMLLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--E 118
VYVGAV V FLF++MMLD+D + +G++ +V F
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFVELRQGFLQYLPVGVLVGLVFLAELVLVLGTWTFGEGVT 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G ++ +N IG+VLYT Y + + +G ILL++MIGAIVL LRH+ ++KRQ +
Sbjct: 121 GAVASAAPGASNAVQIGRVLYTDYVFFFQAAGLILLVAMIGAIVLTLRHKENVKRQSVPV 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q +I +VKV SGKG+
Sbjct: 181 QNARTKAMAIDVVKVPSGKGL 201
>gi|325267329|ref|ZP_08133991.1| NADH-quinone oxidoreductase subunit J [Kingella denitrificans ATCC
33394]
gi|324981266|gb|EGC16916.1| NADH-quinone oxidoreductase subunit J [Kingella denitrificans ATCC
33394]
Length = 217
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 66/198 (33%), Positives = 116/198 (58%), Gaps = 3/198 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + FYLF+ + + + VT +NP+++ L+ F +A ++LL+ AEF+ + +V
Sbjct: 1 MTFQLILFYLFAAVILYGALQTVTAKNPVHAALHLVLTFCASAMMWLLMQAEFLGITLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+ID+E R + +G+L A L++ +
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDVEEMRQGFWRHAPAALVVGVLMAALLIAIFLAPDTALNQF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + +NV ++GK +YT Y P E++ +L+L M+ AI L+ R + KRQD ++
Sbjct: 121 GLMKDIPADYSNVRDLGKQIYTAYLLPFELAAVLLVLGMVAAIALVHRKTNNPKRQDPAE 180
Query: 179 QLESNP-DNSIVMVKVKS 195
Q++ + N + +VK++S
Sbjct: 181 QVKVSADKNRMRLVKMES 198
>gi|309379793|emb|CBX21569.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 223
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTVNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|89900295|ref|YP_522766.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Rhodoferax
ferrireducens T118]
gi|89345032|gb|ABD69235.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Rhodoferax
ferrireducens T118]
Length = 219
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++ FFY FS + + ++F V+T RNP+Y+V L+ AF AA ++LLL AEF+A+ ++
Sbjct: 1 MDVKTGFFYFFSIVLLFAAFRVITSRNPVYAVLYLVLAFFQAAAIWLLLRAEFLAIALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI ++ + F + +G+ A + +
Sbjct: 61 VYVGAVMVLFLFVVMMLDIKVDGLREGFWKHFPLAATVGVFIALEMAAVLMGGFRVGDEP 120
Query: 121 LSRLV-----FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
S + + +N +GKVLY QY YPLEI+G ILL++MI AI L LR R+D K+
Sbjct: 121 QSAVALGQASAEFSNTRELGKVLYGQYVYPLEIAGAILLVAMIAAIALTLRQRKDSKQVS 180
Query: 176 ISKQLESNPDNSIVMVKVKSGK 197
S Q+ + + ++K+ S K
Sbjct: 181 PSMQVRVKARDRMTVLKMASTK 202
>gi|254674113|emb|CBA09897.1| NADH-ubiquinone oxidoreductase, chain J [Neisseria meningitidis
alpha275]
gi|308388471|gb|ADO30791.1| NADH dehydrogenase I chain J [Neisseria meningitidis alpha710]
gi|325137078|gb|EGC59674.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
M0579]
gi|325202920|gb|ADY98374.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
M01-240149]
gi|325207281|gb|ADZ02733.1| NADH:ubiquinone dehydrogenase, J subunit [Neisseria meningitidis
NZ-05/33]
Length = 223
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A L++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMLWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVYRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|187923349|ref|YP_001894991.1| NADH dehydrogenase subunit J [Burkholderia phytofirmans PsJN]
gi|187714543|gb|ACD15767.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
phytofirmans PsJN]
Length = 230
Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 119/203 (58%), Gaps = 6/203 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + ++S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MEFTTVLFYIFALLLVVSGLKVITSRNPVSSALFLVLAFFNAAAIWMLLQAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN------FMV 114
VYVGAV+V FLF++MMLDI+I+V KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINIDVLRKDFKRFVPMATLVGAIIVIETALILWHGYGATATA 120
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + +N IGKV+YT Y + E++G +LL+++I AI L H++D KRQ
Sbjct: 121 LRDTTAAANGMGDWSNTRLIGKVIYTDYIFAFEVAGLVLLVAIIAAIALTASHKKDSKRQ 180
Query: 175 DISKQLESNPDNSIVMVKVKSGK 197
++S+Q++ + + +VK+KS K
Sbjct: 181 NVSEQVKVRAQDRVRVVKMKSEK 203
>gi|91977346|ref|YP_570005.1| NADH dehydrogenase subunit J [Rhodopseudomonas palustris BisB5]
gi|91683802|gb|ABE40104.1| NADH dehydrogenase (quinone) [Rhodopseudomonas palustris BisB5]
Length = 212
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 126/202 (62%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M M LFFYL++ AI ++ +VV RNP++S LI FVNAAG+F+L+GAEF+AMI +V
Sbjct: 1 MSMPVLFFYLYAGAAIAAAVMVVVARNPVHSALFLILVFVNAAGMFVLMGAEFLAMILIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV---FSA 117
VYVGAV V FLF+IMMLD+D IG + ++ + V
Sbjct: 61 VYVGAVAVLFLFVIMMLDVDFSRLREGFLEYLPFGLLIGAIFLAELLLLAGGWVITPTIT 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + + +N E +G VLYT+Y + +ISG ILL++MIGAIVL LRH++ +KRQ+I+
Sbjct: 121 KTITAPIPTNVSNTEALGLVLYTRYIHYFQISGVILLVAMIGAIVLTLRHKKSVKRQNIN 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
+Q + ++ + +VK G+G+
Sbjct: 181 EQNARTKEAAMAIRQVKPGQGL 202
>gi|304321907|ref|YP_003855550.1| NADH dehydrogenase subunit J [Parvularcula bermudensis HTCC2503]
gi|303300809|gb|ADM10408.1| NADH dehydrogenase subunit J [Parvularcula bermudensis HTCC2503]
Length = 200
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 77/200 (38%), Positives = 117/200 (58%), Gaps = 1/200 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M F +F+ ++ V+ RNP++SV LI AF++ AGLF+L+GAE++A + +V
Sbjct: 1 MGFADFAFSIFATAVVVWGLGVIFARNPVHSVMCLIMAFISTAGLFVLIGAEYLAFLLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRK-KRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VYVGAV V FLF++MMLDID + G L E+ V +++ A
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFAELRAGYARYLPFGVVVAAALVIEIGVMVTSWSGAPAAQ 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
NN E +G VLYT+Y + +I+G +LL++MIGAI+L R R+ IK QD+S+Q
Sbjct: 121 APVAASDGPNNAEQLGMVLYTEYVHFFQIAGLVLLVAMIGAILLTFRQRQGIKTQDVSRQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ ++ + +V V +GKGI
Sbjct: 181 VGRRREDGVEVVSVPTGKGI 200
>gi|59802063|ref|YP_208775.1| hypothetical protein NGO1742 [Neisseria gonorrhoeae FA 1090]
gi|194099638|ref|YP_002002769.1| NuoJ [Neisseria gonorrhoeae NCCP11945]
gi|239999834|ref|ZP_04719758.1| NuoJ [Neisseria gonorrhoeae 35/02]
gi|240017441|ref|ZP_04723981.1| NuoJ [Neisseria gonorrhoeae FA6140]
gi|240081580|ref|ZP_04726123.1| NuoJ [Neisseria gonorrhoeae FA19]
gi|240113862|ref|ZP_04728352.1| NuoJ [Neisseria gonorrhoeae MS11]
gi|240118817|ref|ZP_04732879.1| NuoJ [Neisseria gonorrhoeae PID1]
gi|240124356|ref|ZP_04737312.1| NuoJ [Neisseria gonorrhoeae PID332]
gi|240126568|ref|ZP_04739454.1| NuoJ [Neisseria gonorrhoeae SK-92-679]
gi|240129033|ref|ZP_04741694.1| NuoJ [Neisseria gonorrhoeae SK-93-1035]
gi|254494617|ref|ZP_05107788.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae 1291]
gi|260439646|ref|ZP_05793462.1| NuoJ [Neisseria gonorrhoeae DGI2]
gi|268595644|ref|ZP_06129811.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae 35/02]
gi|268597676|ref|ZP_06131843.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae FA19]
gi|268599928|ref|ZP_06134095.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae MS11]
gi|268604528|ref|ZP_06138695.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae PID1]
gi|268682983|ref|ZP_06149845.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae PID332]
gi|268685148|ref|ZP_06152010.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae SK-92-679]
gi|268687411|ref|ZP_06154273.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae SK-93-1035]
gi|291042887|ref|ZP_06568628.1| NADH-quinone oxidoreductase subunit J [Neisseria gonorrhoeae DGI2]
gi|293398103|ref|ZP_06642308.1| NADH dehydrogenase I subunit J [Neisseria gonorrhoeae F62]
gi|59718958|gb|AAW90363.1| putative NADH dehydrogenase I chain J [Neisseria gonorrhoeae FA
1090]
gi|193934928|gb|ACF30752.1| NuoJ [Neisseria gonorrhoeae NCCP11945]
gi|226513657|gb|EEH63002.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae 1291]
gi|268549033|gb|EEZ44451.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae 35/02]
gi|268551464|gb|EEZ46483.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae FA19]
gi|268584059|gb|EEZ48735.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae MS11]
gi|268588659|gb|EEZ53335.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae PID1]
gi|268623267|gb|EEZ55667.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae PID332]
gi|268625432|gb|EEZ57832.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae SK-92-679]
gi|268627695|gb|EEZ60095.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae SK-93-1035]
gi|291013321|gb|EFE05287.1| NADH-quinone oxidoreductase subunit J [Neisseria gonorrhoeae DGI2]
gi|291611366|gb|EFF40436.1| NADH dehydrogenase I subunit J [Neisseria gonorrhoeae F62]
gi|317165123|gb|ADV08664.1| hypothetical protein NGTW08_1707 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 223
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 110/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSVILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|121593386|ref|YP_985282.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Acidovorax
sp. JS42]
gi|120605466|gb|ABM41206.1| NADH dehydrogenase subunit J [Acidovorax sp. JS42]
Length = 222
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 74/206 (35%), Positives = 120/206 (58%), Gaps = 9/206 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLF+ + + ++F V+T RNP+++V LI AF AAG++LLL AEF+A+ ++
Sbjct: 1 MDAKTGFFYLFAVVLLYAAFRVITARNPVHAVLHLILAFSQAAGIWLLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-------- 112
VY+GAV+V FLF++MMLDI I+ + F + IG + +
Sbjct: 61 VYLGAVMVLFLFVVMMLDIRIDAVRKGFWKHFPVAALIGAIVTFEMAAVLMTGFRGMEEP 120
Query: 113 -MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ + +N + +GK+LYT+Y YP+E++ ILL++MI AI L LR R+D
Sbjct: 121 KAIADVVVNAAGQAVPYSNTKALGKLLYTEYLYPVEVAAVILLVAMIAAIALTLRQRKDS 180
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGK 197
K D S+Q+ + +VMV++ +
Sbjct: 181 KAIDPSEQVRVRARDRLVMVQLPVTQ 206
>gi|323138154|ref|ZP_08073227.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylocystis
sp. ATCC 49242]
gi|322396616|gb|EFX99144.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylocystis
sp. ATCC 49242]
Length = 200
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 118/200 (59%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M ++FFY+F+ + I S+ +V+ RNP++SV LI AF N AGLFLL GAEF+AMI +VVY
Sbjct: 1 MAAVFFYIFATIMIASACVVIFARNPVHSVLFLILAFCNGAGLFLLAGAEFLAMILIVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL---GSFFIGILAAELIVCASNFMVFSAEG 119
VGAV V FLF++MMLD+D + + + + ++ ++
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELKQGFNKYLPVGAAVGVVVLAELGMVAIGWQSAPSASSA 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ +V +N +G+VLYT+Y + S +LL +MIGAIVL L H+ ++KRQ I++Q
Sbjct: 121 AATPIVANVSNTAALGQVLYTKYVIFFQASALVLLTAMIGAIVLTLHHKPNVKRQKIAEQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
N DN I + KV G+
Sbjct: 181 NARNRDNVIEIKKVPFRTGV 200
>gi|222110095|ref|YP_002552359.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Acidovorax
ebreus TPSY]
gi|221729539|gb|ACM32359.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Acidovorax
ebreus TPSY]
Length = 221
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 79/205 (38%), Positives = 122/205 (59%), Gaps = 8/205 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F V+T RNP+++V LI AF AAG++ LL AEF+A+ ++
Sbjct: 1 MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAGVWFLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE-- 118
VY+GAV+V FLF++MMLDI I+ + F + FIG L A + E
Sbjct: 61 VYLGAVMVLFLFVVMMLDIRIDTVRRGFWKHFPLAAFIGALVAFEMAAVLMTGFRGIEEP 120
Query: 119 ------GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ V +N + +GK+LYT+Y YP+E++ ILL++MI AI L LR R+D K
Sbjct: 121 KAVEVLVNAAGQVVPYSNTKALGKLLYTEYLYPVEVAAVILLVAMIAAIALTLRQRKDSK 180
Query: 173 RQDISKQLESNPDNSIVMVKVKSGK 197
D S+Q+ + +VMV++ +
Sbjct: 181 AIDPSEQVRVRARDRLVMVQLPVTQ 205
>gi|332185920|ref|ZP_08387667.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Sphingomonas sp. S17]
gi|332014278|gb|EGI56336.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Sphingomonas sp. S17]
Length = 203
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 119/201 (59%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q++ FY+F+ + I+S+ L + RNP++SV LI AF NAAGL +L GAEF+AM+ ++V
Sbjct: 1 MIQAIAFYIFATVVIVSAGLTIASRNPVHSVMWLILAFFNAAGLMVLCGAEFIAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV---FSAE 118
YVGAV V FLF++MMLDI++ R + + ++ A
Sbjct: 61 YVGAVAVLFLFVVMMLDIEVAAMRAGFARYLPLGLALAVALLAEVIIAFQAWSVGGVQLA 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + + +N++ IG +LYT+Y + E +G +LL++MIGAIVL R R ++ Q+I+K
Sbjct: 121 ARAAPIAPEVSNIQAIGNLLYTRYLFIFEGAGLVLLVAMIGAIVLTHRKRGGVRPQNIAK 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q P +I + G+G+
Sbjct: 181 QNARQPHEAIRNINQPIGQGV 201
>gi|240014993|ref|ZP_04721906.1| NuoJ [Neisseria gonorrhoeae DGI18]
gi|240116593|ref|ZP_04730655.1| NuoJ [Neisseria gonorrhoeae PID18]
gi|240122062|ref|ZP_04735024.1| NuoJ [Neisseria gonorrhoeae PID24-1]
gi|268602262|ref|ZP_06136429.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae PID18]
gi|268586393|gb|EEZ51069.1| NADH dehydrogenase subunit I J [Neisseria gonorrhoeae PID18]
Length = 223
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 110/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSVILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTTNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|85374151|ref|YP_458213.1| NADH dehydrogenase I, J subunit [Erythrobacter litoralis HTCC2594]
gi|84787234|gb|ABC63416.1| NADH dehydrogenase I, J subunit [Erythrobacter litoralis HTCC2594]
Length = 206
Score = 134 bits (338), Expect = 6e-30, Method: Composition-based stats.
Identities = 77/204 (37%), Positives = 119/204 (58%), Gaps = 6/204 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q+ FYLF+ + I S L + RNP++SV LI AF NAAGL +LLGAEF+AM+ ++V
Sbjct: 1 MIQAFAFYLFAALMIASGVLTIMSRNPVHSVLWLILAFFNAAGLMVLLGAEFIAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----NFMVFS 116
YVGAV V FLF++MMLDID + F I ++ +V +
Sbjct: 61 YVGAVAVLFLFVVMMLDIDFAELRAGFIKNFPLGIAIALVLLAELVLGIGAYRAGIVELG 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK-RQD 175
+ + N+E++G ++Y +Y + E +G ILL++MIGAIVL R ++ + Q+
Sbjct: 121 TPDGSAAPLVGETNIESLGALMYGKYLFLFEGAGLILLVAMIGAIVLTHRDLKNTRGHQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I KQ+ P+ + VM + + GKG+
Sbjct: 181 IGKQVSRRPEEATVMKQPEIGKGV 204
>gi|239816474|ref|YP_002945384.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Variovorax
paradoxus S110]
gi|239803051|gb|ACS20118.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Variovorax
paradoxus S110]
Length = 218
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 69/194 (35%), Positives = 119/194 (61%), Gaps = 1/194 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++ FYLF+ + + ++F V+T RNP+Y+ L+ AF A+ ++LLL AEF+A+ ++
Sbjct: 1 MDVKTGLFYLFAAVLLFAAFRVITARNPVYAALYLVLAFFQASAIWLLLRAEFLAISLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAEG 119
VYVGAV+V FLF++MMLDI+++ + F + +G ++A E+ A
Sbjct: 61 VYVGAVMVLFLFVVMMLDINVDGLRQGFWKHFPLAAGVGALIALEMAAVLMGGFRLEAPR 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ G+N +GK+LY++Y YPLEI+ ILL++++ AI L LR R+D K + S Q
Sbjct: 121 AGAAAAAHGSNTLELGKLLYSEYLYPLEIAAVILLVAIVAAIALTLRTRKDSKYVNPSDQ 180
Query: 180 LESNPDNSIVMVKV 193
+ + + +V++
Sbjct: 181 VRVKARDRVRIVQM 194
>gi|84502625|ref|ZP_01000744.1| NADH dehydrogenase subunit J [Oceanicola batsensis HTCC2597]
gi|84389020|gb|EAQ01818.1| NADH dehydrogenase subunit J [Oceanicola batsensis HTCC2597]
Length = 201
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 85/201 (42%), Positives = 122/201 (60%), Gaps = 2/201 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +L FYLF+F + V RNP++SV LI AF+++AGLF+LLGAEFVAM+ ++
Sbjct: 1 MTAAALAFYLFAFSTLAGGLFTVIARNPVHSVLWLILAFLSSAGLFVLLGAEFVAMLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDID + + + IG++ A S
Sbjct: 61 VYVGAVAVLFLFVVMMLDIDFAALKAEMAKYMPLALLIGVILLMQFGLAYGSWEASDMAA 120
Query: 121 LSRLV--FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+RL +G N +G ++Y QY +++G ILL++MIGAIVL LRHR DIKRQ++
Sbjct: 121 SNRLAAMPEGENTAGLGLLIYDQYFLLFQLAGLILLVAMIGAIVLTLRHRTDIKRQNVLA 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q+ +P S+ + VK G+G+
Sbjct: 181 QMWRDPAKSMELKDVKPGQGL 201
>gi|288942125|ref|YP_003444365.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Allochromatium vinosum DSM 180]
gi|288897497|gb|ADC63333.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Allochromatium vinosum DSM 180]
Length = 212
Score = 134 bits (337), Expect = 7e-30, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 118/198 (59%), Gaps = 3/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + L FY+F+ + + ++ +V+T +NP++SV L+ AFV++A L++LL AEF+ ++ ++V
Sbjct: 1 MAEKLIFYVFALITVWAAVMVITRKNPVHSVLFLVLAFVSSAALWVLLEAEFLGIVLILV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAA--ELIVCASNFMVFSAEG 119
YVGAV+V FLF++MMLDID+ + + I + A L++ A
Sbjct: 61 YVGAVMVLFLFVVMMLDIDLATIRAGFVQNLPLAGLIAAIMAVEILLIVGPGNFGLDAFP 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ L + +N +G +LY+ Y YP+EI+ ILLL+++ AI L LR R D K D ++Q
Sbjct: 121 KPEPLGAEVSNTRELGLLLYSVYIYPVEIAAVILLLAIVAAIRLTLRRRPDNKYVDPARQ 180
Query: 180 LESNPD-NSIVMVKVKSG 196
+ + + +VK+ +
Sbjct: 181 VRVRKGPDRVRLVKMAAE 198
>gi|160900603|ref|YP_001566185.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Delftia
acidovorans SPH-1]
gi|160366187|gb|ABX37800.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Delftia
acidovorans SPH-1]
Length = 222
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 120/202 (59%), Gaps = 8/202 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F VVT RNP+++V +LI AF AAG++LLL AEF+ + ++
Sbjct: 1 MDAKTGFFYLFSVVLLFAAFRVVTARNPVHAVLNLILAFSQAAGIWLLLKAEFLGVTLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+GAV+V FLF++MMLDI I+ + F + IG L A + E
Sbjct: 61 VYLGAVMVLFLFVVMMLDIRIDAVRQGFWKHFPFAALIGALIAFEMGMVLMGGFSGVEEP 120
Query: 121 LSRLV--------FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + +N + +GK+LYT+Y YP+EI+ ILL++MI AI L LR R+D K
Sbjct: 121 KAIAATVNAAGQTVQYSNTQALGKLLYTEYLYPVEIAAVILLVAMIAAIALTLRKRKDSK 180
Query: 173 RQDISKQLESNPDNSIVMVKVK 194
+ ++Q+ + + +VKV
Sbjct: 181 AVNPAQQIRVRAKDRLELVKVP 202
>gi|225627308|ref|ZP_03785345.1| NADH-quinone oxidoreductase subunit J [Brucella ceti str. Cudo]
gi|237815247|ref|ZP_04594245.1| NADH-quinone oxidoreductase subunit J [Brucella abortus str. 2308
A]
gi|225617313|gb|EEH14358.1| NADH-quinone oxidoreductase subunit J [Brucella ceti str. Cudo]
gi|237790084|gb|EEP64294.1| NADH-quinone oxidoreductase subunit J [Brucella abortus str. 2308
A]
Length = 215
Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 116/190 (61%), Gaps = 4/190 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ I S+F+V+ RNP++SV LI F NAA LFLL GAEF+AMI LVVYVGAV V FLF+
Sbjct: 26 IMIASAFMVIAARNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLVVYVGAVAVLFLFV 85
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG----N 129
+MMLD+D + + +G++ ++ +F+ + L
Sbjct: 86 VMMLDVDFAELKRGALQYAPVGALVGLILLGELIFVFASRMFTPKLGQGALPIPDVATRT 145
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIV 189
N +G +LYT Y + +++G +LL++MIGAIVL +RH+ ++KRQ I Q+ P+ +I
Sbjct: 146 NTAALGDILYTHYVFYFQVAGLVLLVAMIGAIVLTMRHKPNVKRQSIPAQVARTPETAIE 205
Query: 190 MVKVKSGKGI 199
+ KV++GKGI
Sbjct: 206 IRKVETGKGI 215
>gi|39936006|ref|NP_948282.1| NADH dehydrogenase subunit J [Rhodopseudomonas palustris CGA009]
gi|192291661|ref|YP_001992266.1| NADH dehydrogenase subunit J [Rhodopseudomonas palustris TIE-1]
gi|39649860|emb|CAE28382.1| NADH-ubiquinone dehydrogenase chain J [Rhodopseudomonas palustris
CGA009]
gi|192285410|gb|ACF01791.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Rhodopseudomonas palustris TIE-1]
Length = 212
Score = 133 bits (336), Expect = 9e-30, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M M LFFYL++ +AI ++ +VV RNP++S LI FVNAAG+F+L+GAEF+AMI +V
Sbjct: 1 MSMPVLFFYLYAGVAIAAAVMVVVARNPVHSALFLILVFVNAAGMFVLMGAEFLAMILIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--- 117
VYVGAV V FLF+IMMLD+D IG + ++ + V S
Sbjct: 61 VYVGAVAVLFLFVIMMLDVDYSQLREGFLEYLPFGLLIGFIFLAELLLLAGGWVISPTVT 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ S + +N E +G VLYT+Y + ++SG +LL++M+GAIVL LRH++ +KRQDI+
Sbjct: 121 KAVTSPIPTGVSNTEALGLVLYTRYIHYFQVSGMVLLVAMVGAIVLTLRHKKKVKRQDIA 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q + + ++ + VK+G+G+
Sbjct: 181 AQNARSKETAMAIRHVKTGQGL 202
>gi|87200305|ref|YP_497562.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Novosphingobium aromaticivorans DSM 12444]
gi|87135986|gb|ABD26728.1| NADH dehydrogenase subunit J [Novosphingobium aromaticivorans DSM
12444]
Length = 205
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 122/203 (60%), Gaps = 5/203 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q FYLF+ + I S + + RNP++SV LI AF NAAGL +L GAEF+AM+ ++V
Sbjct: 1 MIQVFAFYLFATLCIFSGAVTILARNPVHSVLWLILAFFNAAGLMVLAGAEFIAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGI-----LAAELIVCASNFMVFS 116
YVGAV V FLF++MMLDID + F + + L L+V S +
Sbjct: 61 YVGAVAVLFLFVVMMLDIDFAELRAGFIKNFPLGMALAVVLFVELFVGLVVRGSGAVALG 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+E+IG +LY++Y + E +G +LL++MIGAIVL R R D + Q++
Sbjct: 121 KADGSAMQAAGASNIESIGALLYSRYLFLFEAAGIVLLVAMIGAIVLTHRQRTDTRGQNV 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
SKQ+ P+++ V ++ + GKG+
Sbjct: 181 SKQVARRPEDATVNLQPEVGKGV 203
>gi|119897696|ref|YP_932909.1| NADH-ubiquinone oxidoreductase subunit J [Azoarcus sp. BH72]
gi|119670109|emb|CAL94022.1| NADH-ubiquinone oxidoreductase, chain J probable [Azoarcus sp.
BH72]
Length = 200
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 105/198 (53%), Gaps = 2/198 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY + + + + V+T RNP+++ L+ +F A G++LLL AEF+A+ ++
Sbjct: 1 MEFKTAVFYFLAAILVFAGLRVITARNPVHAALFLVLSFFTAGGIWLLLQAEFLAITLVM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG- 119
VYVGAV+V FLF++MMLDI+++ IGIL + F +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDRIRQGFWNYLPVGALIGILMVVEMAMVLGGRYFDLDSM 120
Query: 120 -ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+N +G+VLYT Y YP E++ +L+++M+ A+ L LR R+ K S
Sbjct: 121 PAPPPAAADYSNTAELGRVLYTDYVYPFELASLVLVVAMVAAVSLTLRKRKGNKYVQPSD 180
Query: 179 QLESNPDNSIVMVKVKSG 196
Q+ + + +VK+ +
Sbjct: 181 QVAVKREGRVELVKMPAE 198
>gi|319761771|ref|YP_004125708.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Alicycliphilus denitrificans BC]
gi|330826551|ref|YP_004389854.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Alicycliphilus denitrificans K601]
gi|317116332|gb|ADU98820.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Alicycliphilus denitrificans BC]
gi|329311923|gb|AEB86338.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Alicycliphilus denitrificans K601]
Length = 222
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 77/205 (37%), Positives = 125/205 (60%), Gaps = 8/205 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++ FFYLFS + + ++F V+T RNP+++V LI AF AAG++LLL AEF+A+ ++
Sbjct: 1 MDVKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAGVWLLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+GAV+V FLF++MMLDI + + F + FIG L A + E
Sbjct: 61 VYLGAVMVLFLFVVMMLDIRFDTVRRGFWKHFPLAAFIGALVAFEMAAVLMTGFRGVEEP 120
Query: 121 LSRL--------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ V +N + +G+++YT+Y YP+EI+ ILL++MI AI L LR R+D+K
Sbjct: 121 KAVPALVNAAGQVLPYSNTQALGRLMYTEYLYPVEIAAVILLVAMISAIALTLRQRKDVK 180
Query: 173 RQDISKQLESNPDNSIVMVKVKSGK 197
D + QL + + +V++K+ + +
Sbjct: 181 AGDATAQLRARASDRLVVLKMPTTQ 205
>gi|171463535|ref|YP_001797648.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193073|gb|ACB44034.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 215
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ ++FFY F+ + IIS+ V+T RNP+++ L+ AF A+GL++LL AEF+++ ++V
Sbjct: 7 TLFAVFFYGFAGLLIISALRVITARNPVHAALFLVLAFFCASGLWMLLKAEFLSLALILV 66
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG--ILAAELIVCASNFMVFSAEG 119
YVGAV+V FLF++MMLD+D+E K+ +F +G I+ IV +F+ +A
Sbjct: 67 YVGAVMVLFLFVVMMLDLDLEHLRRDFKKFLPVAFLMGAVIVLELSIVIIRSFIGTNAPV 126
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ NN + +G +++ YAY E++G ILL+++I A+ L LR+R+D K Q+I +Q
Sbjct: 127 QPMPEEVMANNTQALGMLIFVDYAYAFEVAGVILLVAIIAAVALTLRNRKDSKSQNIHEQ 186
Query: 180 LESNPDNSIVMVKVKS 195
+ + +VK+ S
Sbjct: 187 VNVVAAERMRIVKMGS 202
>gi|319638826|ref|ZP_07993584.1| NADH dehydrogenase subunit I J [Neisseria mucosa C102]
gi|317399730|gb|EFV80393.1| NADH dehydrogenase subunit I J [Neisseria mucosa C102]
Length = 223
Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats.
Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 3/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + + + VT +NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAMIWMLMQAEFLGVTLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G L A ++ +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEAMRAGFWRHAPVAGVVGTLLAVALILILVNPKTDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NN+ ++G +YT Y P E++ +LLL M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMVAAIALVHRKTFNPKRMDPAD 180
Query: 179 QLESNPDN-SIVMVKVKSGK 197
Q++ D + +VK+++ K
Sbjct: 181 QVKVRADQGRMRLVKMEAVK 200
>gi|237748882|ref|ZP_04579362.1| predicted protein [Oxalobacter formigenes OXCC13]
gi|229380244|gb|EEO30335.1| predicted protein [Oxalobacter formigenes OXCC13]
Length = 211
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 114/196 (58%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FY+F + ++++ V+T R+P+++V L+ +F A +++LL AEF+A+I L+
Sbjct: 4 MQLTNVLFYVFGAIMVLAALRVITSRHPVHAVLYLVLSFFTGAAIWILLKAEFLALILLL 63
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MM+D+D+ + ++ + + +G+ + + +
Sbjct: 64 VYVGAVMVLFLFVVMMMDLDLTELKRAARKNMISATIVGVAIVLEMSAVLFRGFWMIDSH 123
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + K IGK L+T Y + +EI+ ILL+++I A+ L R R D K +K +
Sbjct: 124 VPKSASKIGLTAEIGKALFTDYLFNVEIAAIILLVALIAAVTLTFRKRTDAKYTSANKAI 183
Query: 181 ESNPDNSIVMVKVKSG 196
++ I +V++K+
Sbjct: 184 HVRAEDRIRIVEMKAE 199
>gi|217979058|ref|YP_002363205.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylocella
silvestris BL2]
gi|217504434|gb|ACK51843.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylocella
silvestris BL2]
Length = 201
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 88/201 (43%), Positives = 120/201 (59%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ +LFFYLFS + I S+F V+T RNP++SV LI AF NAAGLFLLLGAEF+AM+ +VV
Sbjct: 1 MIAALFFYLFSAVLIASAFAVITSRNPVHSVLFLILAFFNAAGLFLLLGAEFLAMLLVVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM---VFSAE 118
YVGAV V FLF++MMLD+D + R IG + +V S
Sbjct: 61 YVGAVAVLFLFVVMMLDVDFAEFKQGFMRYLPVGGAIGAIVLLELVLVVGGWRVDAASLA 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
S +N +G+VLYTQYA +G +LL +MIGAI+L L H+ IKRQDI+
Sbjct: 121 NVASPAPPAMSNTLALGRVLYTQYACLFIAAGMVLLTAMIGAIILTLHHKVGIKRQDIAA 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q P +++ + K +G+
Sbjct: 181 QNARTPKDAVELRKKSFRQGV 201
>gi|121609753|ref|YP_997560.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Verminephrobacter eiseniae EF01-2]
gi|121554393|gb|ABM58542.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Verminephrobacter eiseniae EF01-2]
Length = 223
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 120/206 (58%), Gaps = 9/206 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F V+T RNP+++V LI AF AA ++LLL AEF+A+ ++
Sbjct: 1 MDAKTGFFYLFSVVLLFAAFRVITARNPVHAVLYLILAFSQAAAVWLLLKAEFLAITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+GAV+V FLF++MMLDI I+ + F + +G L A + + +
Sbjct: 61 VYLGAVMVLFLFVVMMLDIHIDSLRRGFWKHFPLAASVGALIALEMAAVLMGGFRATDEP 120
Query: 121 LSRLVFKGNNV---------ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ + + + +GK+LYT+Y +P+EI+ ILL++MI AI L LR R+D
Sbjct: 121 KAGVAIADDAAGQLLAYSNSKALGKLLYTEYLFPVEIAAVILLVAMIAAIALTLRQRKDS 180
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGK 197
K D + Q+ + + +V++ + +
Sbjct: 181 KAIDAAAQIRVRASDRLELVRMAATR 206
>gi|301631489|ref|XP_002944830.1| PREDICTED: hypothetical protein LOC100488392 [Xenopus (Silurana)
tropicalis]
Length = 1458
Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 67/170 (39%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F V+ RNP+++V SLI AF AAG++LLL AEF+ + ++
Sbjct: 1277 MDAKTGFFYLFSVVLLFAAFRVIMARNPVHAVLSLILAFSQAAGIWLLLKAEFLGITLVL 1336
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAEL--IVCASNFMVFSAE 118
VY+GAV+V FLF++MMLDI I+ + F + +G + +V F
Sbjct: 1337 VYLGAVMVLFLFVVMMLDIRIDSVRQGFWKHFPLAALVGAIITFEMALVLMDGFRSIDEP 1396
Query: 119 GELSRLV------FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIV 162
+S +V +N +GK+LYTQY YP+EI+ ILL++MI AI
Sbjct: 1397 KAISAVVDAAGQAVPYSNTRVLGKLLYTQYLYPVEIAAVILLVAMIAAIT 1446
>gi|239831695|ref|ZP_04680024.1| NADH-quinone oxidoreductase subunit J [Ochrobactrum intermedium LMG
3301]
gi|239823962|gb|EEQ95530.1| NADH-quinone oxidoreductase subunit J [Ochrobactrum intermedium LMG
3301]
Length = 215
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 75/190 (39%), Positives = 118/190 (62%), Gaps = 4/190 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ I S+F+V+ RNP++SV LI F NAA LFLL GAEF+AMI LVVYVGAV V FLF+
Sbjct: 26 IMIASAFMVIAARNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLVVYVGAVAVLFLFV 85
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE----GELSRLVFKGN 129
+MMLD+D + + +G++ ++ +F+ + + + +
Sbjct: 86 VMMLDVDFSELKRGALQYAPVGALVGLILLGELIFVFASNMFAPKLGQGAVPIPNIAERS 145
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIV 189
N +G +LYT + + +++G +LL++MIGAIVL LRH+ ++KRQ I Q+ P+ +I
Sbjct: 146 NTAALGDILYTDFVFYFQVAGLVLLVAMIGAIVLTLRHKPNVKRQSIPAQVARTPETAIE 205
Query: 190 MVKVKSGKGI 199
+ +V++GKGI
Sbjct: 206 IKQVETGKGI 215
>gi|330817783|ref|YP_004361488.1| hypothetical protein bgla_1g29200 [Burkholderia gladioli BSR3]
gi|327370176|gb|AEA61532.1| hypothetical protein bgla_1g29200 [Burkholderia gladioli BSR3]
Length = 220
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 113/197 (57%), Gaps = 4/197 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+FS + +IS V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MDFTTVLFYIFSLLLVISGLKVITARNPVASALFLVLAFFNAAAIWMLLEAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILA----AELIVCASNFMVFS 116
VYVGAV+V FLF++MMLDI+ +V +R + +G + A ++
Sbjct: 61 VYVGAVMVLFLFVVMMLDINTDVLRRDFRRFVPMATVVGAIIVVETALILWRGYGATSSP 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
S + N + IGKV+YT Y + EI+G +LL+++I A+ L ++ KRQ +
Sbjct: 121 VREIASGALANMTNTQLIGKVIYTDYIFAFEIAGLVLLVAIIAAVSLTSGRGKERKRQRV 180
Query: 177 SKQLESNPDNSIVMVKV 193
S Q+ + + +VK+
Sbjct: 181 SDQVSVRRQDRVRLVKM 197
>gi|319405689|emb|CBI79312.1| NADH dehydrogenase I chain J [Bartonella sp. AR 15-3]
Length = 206
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 89/198 (44%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FFY+F+F+ +IS+ +VVT RNP++SV LI F NAA LFLL GAEF+ +I LVVYVGAV
Sbjct: 9 FFYIFAFIMLISAVIVVTARNPVHSVLFLILVFFNAAVLFLLAGAEFLGLILLVVYVGAV 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRG-----FLGSFFIGILAAELIVCASNFMVFSAEGEL 121
V FLF++MMLD+D + + F+G L I + + +
Sbjct: 69 AVLFLFVVMMLDVDFAELKSGALKYAPIGSFIGIIIAIELIFVFISNGFSLVSGVHITQP 128
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ + N + +G +LYT Y + +ISG ILL++MIGAIVL LRHR IKRQ I+ Q+
Sbjct: 129 MPDLAQRTNTQALGDILYTDYVFYFQISGIILLVAMIGAIVLTLRHRSGIKRQSIAAQVA 188
Query: 182 SNPDNSIVMVKVKSGKGI 199
+N+I + KV+SGKGI
Sbjct: 189 RTAENAIEIKKVESGKGI 206
>gi|17987432|ref|NP_540066.1| NADH dehydrogenase subunit J [Brucella melitensis bv. 1 str. 16M]
gi|17983124|gb|AAL52330.1| NADH-quinone oxidoreductase chain j [Brucella melitensis bv. 1 str.
16M]
Length = 189
Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats.
Identities = 77/189 (40%), Positives = 115/189 (60%), Gaps = 4/189 (2%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
I S+F+V+ RNP++SV LI F NAA LFLL GAEF+AMI LVVYVGAV V FLF++
Sbjct: 1 MIASAFMVIAARNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLVVYVGAVAVLFLFVV 60
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG----NN 130
MMLD+D + + +G++ ++ +F+ + L N
Sbjct: 61 MMLDVDFAELKRGALQYAPVGALVGLILLGELIFVFASRMFTPKLGQGALPIPDVATRTN 120
Query: 131 VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVM 190
+G +LYT Y + +++G +LL++MIGAIVL +RH+ ++KRQ I Q+ P+ +I +
Sbjct: 121 TAALGDILYTHYVFYFQVAGLVLLVAMIGAIVLTMRHKPNVKRQSIPAQVARTPETAIEI 180
Query: 191 VKVKSGKGI 199
KV++GKGI
Sbjct: 181 RKVETGKGI 189
>gi|329909996|ref|ZP_08275181.1| NADH-ubiquinone oxidoreductase chain J [Oxalobacteraceae bacterium
IMCC9480]
gi|327546333|gb|EGF31352.1| NADH-ubiquinone oxidoreductase chain J [Oxalobacteraceae bacterium
IMCC9480]
Length = 221
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 64/196 (32%), Positives = 118/196 (60%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY FS + ++++ V+T RNP++S L+ +F +AA ++LLL AEF+A++ ++
Sbjct: 1 MEFKTALFYAFSAILVMAALKVITDRNPVHSALFLVLSFFSAAAIWLLLQAEFLAIVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+++ + FIG+L + ++ + +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINVDKMREGFWGYLPFAAFIGVLIVLEMSAVLLQAFWAPDAQ 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + +GK++YT+Y + EI+ ILLL+++ A+ L LR R+D K D ++ +
Sbjct: 121 VPSAASTIGTTKELGKLIYTEYVFAFEIAAAILLLAIVAAVALTLRKRKDSKYFDPAEAV 180
Query: 181 ESNPDNSIVMVKVKSG 196
+ + + +VK+KS
Sbjct: 181 KVKASDRVRIVKMKSE 196
>gi|144900795|emb|CAM77659.1| NADH-quinone oxidoreductase chain 10 [Magnetospirillum
gryphiswaldense MSR-1]
Length = 203
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 78/203 (38%), Positives = 121/203 (59%), Gaps = 5/203 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ +L FY+F+ +A+ S +V++ RNP++SV LI F NAAGLFLLLGAEF+AM+ +VV
Sbjct: 1 MIAALIFYMFAGLAVASGVMVISARNPVHSVLFLILCFFNAAGLFLLLGAEFLAMVLVVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE--- 118
YVGAV V FLF++MMLDI+ + IG++ + F+ +
Sbjct: 61 YVGAVAVMFLFVVMMLDINFLRLREGVAQYLPTGAVIGLVLLVELAVMFGGWAFAPDVEA 120
Query: 119 --GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
V + N E +G+++YT+Y Y + SG +LL++M+GAI+L R R +++Q I
Sbjct: 121 LLAAPIPAVSEMTNTEALGRLIYTKYVYLFQASGVVLLVAMVGAILLTHRSRTGVRKQKI 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
Q+ NS+ + KV +G GI
Sbjct: 181 YDQVGRTAANSVEIRKVSTGGGI 203
>gi|85708743|ref|ZP_01039809.1| NADH dehydrogenase subunit J [Erythrobacter sp. NAP1]
gi|85690277|gb|EAQ30280.1| NADH dehydrogenase subunit J [Erythrobacter sp. NAP1]
Length = 207
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 78/205 (38%), Positives = 116/205 (56%), Gaps = 7/205 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q L FYLF+ + I S+ +V+ RNP++SV LI +F NAAGL +L+GAEF+AM+ ++V
Sbjct: 1 MIQVLAFYLFAGLVIASAVMVIMARNPVHSVLWLILSFFNAAGLMVLVGAEFIAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV-----FS 116
YVGAV V FLF++MMLDID + F + ++ +
Sbjct: 61 YVGAVAVLFLFVVMMLDIDFAAMRAGFIKNFPLGIAVALILLAELFLGLGAYGAGGIELG 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQ 174
+ +N++ IG +LY +Y EI+G ILL++MIGAIVL R + RQ
Sbjct: 121 TPDGTAAERGDVSNIQAIGALLYGRYIVLFEIAGIILLVAMIGAIVLTHREAKPGARGRQ 180
Query: 175 DISKQLESNPDNSIVMVKVKSGKGI 199
DI KQ+ P+ + VM + GKG+
Sbjct: 181 DIGKQIRRRPEEATVMKNPEYGKGV 205
>gi|209964541|ref|YP_002297456.1| NADH-quinone oxidoreductase chain J [Rhodospirillum centenum SW]
gi|209958007|gb|ACI98643.1| NADH-quinone oxidoreductase chain J [Rhodospirillum centenum SW]
Length = 204
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 122/204 (59%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV+ + FY+F+ + + + +VV+ RNP++SV LI AF NAA LFLL+GAEF+AMI ++
Sbjct: 1 MVLSAAAFYVFAAILLAAGVMVVSARNPVHSVLYLIVAFFNAAVLFLLIGAEFIAMILII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV-----F 115
VYVGAV V FLF++MMLDI + ++ IG + + +
Sbjct: 61 VYVGAVAVLFLFVVMMLDISFQEIRRTYRQYVPLGALIGTILMAELALVTVSWAVAPDAA 120
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
++ + NN E +G+VLYT Y + ++SG ILL++MIGAIVL LR R ++RQ
Sbjct: 121 ASLAAPTPADTAVNNTEALGQVLYTHYVFAFQVSGLILLVAMIGAIVLTLRSRGGLRRQV 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I++Q+ P+ + + KV + G+
Sbjct: 181 IAQQIRRRPEEVLSVRKVPTRGGV 204
>gi|157964938|ref|YP_001499762.1| NADH dehydrogenase subunit J [Rickettsia massiliae MTU5]
gi|157844714|gb|ABV85215.1| NADH dehydrogenase I chain J [Rickettsia massiliae MTU5]
Length = 208
Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats.
Identities = 83/202 (41%), Positives = 118/202 (58%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +FFYLF+ + ISS VV +N +YSV LIFAF+N AGL +LLGAEF+AM+ +V
Sbjct: 1 MNTMPIFFYLFATLITISSLCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGAV V FLF+IMMLD+ + K S I ++ +V +
Sbjct: 61 IYVGAVAVLFLFVIMMLDMHFNKTITQLKENLALSILIALIMFADLVIIILLGTKNINFN 120
Query: 121 LS---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + +N + IG VLYT + P +++G IL ++MI I L L+ R +KRQDIS
Sbjct: 121 SNVSFAITNNISNTKAIGGVLYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKRQDIS 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
KQL N +N+++M K KG+
Sbjct: 181 KQLRHNKENTVLMTKPILNKGV 202
>gi|23501698|ref|NP_697825.1| NADH dehydrogenase subunit J [Brucella suis 1330]
gi|62289760|ref|YP_221553.1| NADH dehydrogenase subunit J [Brucella abortus bv. 1 str. 9-941]
gi|82699688|ref|YP_414262.1| NADH dehydrogenase subunit J [Brucella melitensis biovar Abortus
2308]
gi|148559090|ref|YP_001258789.1| NADH dehydrogenase subunit J [Brucella ovis ATCC 25840]
gi|161618775|ref|YP_001592662.1| NADH dehydrogenase subunit J [Brucella canis ATCC 23365]
gi|163843084|ref|YP_001627488.1| NADH dehydrogenase subunit J [Brucella suis ATCC 23445]
gi|189024005|ref|YP_001934773.1| NADH dehydrogenase subunit J [Brucella abortus S19]
gi|225852327|ref|YP_002732560.1| NADH dehydrogenase subunit J [Brucella melitensis ATCC 23457]
gi|254689067|ref|ZP_05152321.1| NADH dehydrogenase subunit J [Brucella abortus bv. 6 str. 870]
gi|254693549|ref|ZP_05155377.1| NADH dehydrogenase subunit J [Brucella abortus bv. 3 str. Tulya]
gi|254697201|ref|ZP_05159029.1| NADH dehydrogenase subunit J [Brucella abortus bv. 2 str. 86/8/59]
gi|254701579|ref|ZP_05163407.1| NADH dehydrogenase subunit J [Brucella suis bv. 5 str. 513]
gi|254704126|ref|ZP_05165954.1| NADH dehydrogenase subunit J [Brucella suis bv. 3 str. 686]
gi|254706974|ref|ZP_05168802.1| NADH dehydrogenase subunit J [Brucella pinnipedialis M163/99/10]
gi|254709919|ref|ZP_05171730.1| NADH dehydrogenase subunit J [Brucella pinnipedialis B2/94]
gi|254713920|ref|ZP_05175731.1| NADH dehydrogenase subunit J [Brucella ceti M644/93/1]
gi|254717022|ref|ZP_05178833.1| NADH dehydrogenase subunit J [Brucella ceti M13/05/1]
gi|254730097|ref|ZP_05188675.1| NADH dehydrogenase subunit J [Brucella abortus bv. 4 str. 292]
gi|256031412|ref|ZP_05445026.1| NADH dehydrogenase subunit J [Brucella pinnipedialis M292/94/1]
gi|256044490|ref|ZP_05447394.1| NADH dehydrogenase subunit J [Brucella melitensis bv. 1 str. Rev.1]
gi|256060923|ref|ZP_05451081.1| NADH dehydrogenase subunit J [Brucella neotomae 5K33]
gi|256113346|ref|ZP_05454204.1| NADH dehydrogenase subunit J [Brucella melitensis bv. 3 str. Ether]
gi|256159533|ref|ZP_05457301.1| NADH dehydrogenase subunit J [Brucella ceti M490/95/1]
gi|256254820|ref|ZP_05460356.1| NADH dehydrogenase subunit J [Brucella ceti B1/94]
gi|256257316|ref|ZP_05462852.1| NADH dehydrogenase subunit J [Brucella abortus bv. 9 str. C68]
gi|256264174|ref|ZP_05466706.1| NADH-ubiquinone/plastoquinone oxidoreductase [Brucella melitensis
bv. 2 str. 63/9]
gi|256369243|ref|YP_003106751.1| NADH dehydrogenase subunit J [Brucella microti CCM 4915]
gi|260168546|ref|ZP_05755357.1| NADH dehydrogenase subunit J [Brucella sp. F5/99]
gi|260545490|ref|ZP_05821231.1| NADH-ubiquinone/plastoquinone oxidoreductase [Brucella abortus NCTC
8038]
gi|260563844|ref|ZP_05834330.1| NADH-ubiquinone/plastoquinone oxidoreductase [Brucella melitensis
bv. 1 str. 16M]
gi|260566625|ref|ZP_05837095.1| NADH-ubiquinone/plastoquinone oxidoreductase [Brucella suis bv. 4
str. 40]
gi|260754565|ref|ZP_05866913.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
abortus bv. 6 str. 870]
gi|260757786|ref|ZP_05870134.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
abortus bv. 4 str. 292]
gi|260761611|ref|ZP_05873954.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
abortus bv. 2 str. 86/8/59]
gi|260883592|ref|ZP_05895206.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
abortus bv. 9 str. C68]
gi|261213814|ref|ZP_05928095.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
abortus bv. 3 str. Tulya]
gi|261218829|ref|ZP_05933110.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella ceti
M13/05/1]
gi|261222001|ref|ZP_05936282.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella ceti
B1/94]
gi|261314437|ref|ZP_05953634.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
pinnipedialis M163/99/10]
gi|261317465|ref|ZP_05956662.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
pinnipedialis B2/94]
gi|261321672|ref|ZP_05960869.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella ceti
M644/93/1]
gi|261324923|ref|ZP_05964120.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
neotomae 5K33]
gi|261752132|ref|ZP_05995841.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella suis
bv. 5 str. 513]
gi|261754792|ref|ZP_05998501.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella suis
bv. 3 str. 686]
gi|261758019|ref|ZP_06001728.1| NADH dehydrogenase subunit J [Brucella sp. F5/99]
gi|265988501|ref|ZP_06101058.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
pinnipedialis M292/94/1]
gi|265990914|ref|ZP_06103471.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
melitensis bv. 1 str. Rev.1]
gi|265994752|ref|ZP_06107309.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
melitensis bv. 3 str. Ether]
gi|265997965|ref|ZP_06110522.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella ceti
M490/95/1]
gi|294852168|ref|ZP_06792841.1| NADH dehydrogenase I subunit J [Brucella sp. NVSL 07-0026]
gi|297248165|ref|ZP_06931883.1| NADH dehydrogenase I subunit J [Brucella abortus bv. 5 str. B3196]
gi|23347621|gb|AAN29740.1| NADH dehydrogenase I, J subunit [Brucella suis 1330]
gi|62195892|gb|AAX74192.1| NuoJ, NADH dehydrogenase I, J subunit [Brucella abortus bv. 1 str.
9-941]
gi|82615789|emb|CAJ10787.1| Photosynthetic reaction centre
protein:NADH-ubiquinone/plastoquinone oxidoreductase,
chain 6 [Brucella melitensis biovar Abortus 2308]
gi|148370347|gb|ABQ60326.1| NADH dehydrogenase I, J subunit [Brucella ovis ATCC 25840]
gi|161335586|gb|ABX61891.1| NADH-quinone oxidoreductase chain J [Brucella canis ATCC 23365]
gi|163673807|gb|ABY37918.1| NADH-quinone oxidoreductase chain J [Brucella suis ATCC 23445]
gi|189019577|gb|ACD72299.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Brucella
abortus S19]
gi|225640692|gb|ACO00606.1| NADH-quinone oxidoreductase subunit J [Brucella melitensis ATCC
23457]
gi|255999403|gb|ACU47802.1| NADH dehydrogenase subunit J [Brucella microti CCM 4915]
gi|260096897|gb|EEW80772.1| NADH-ubiquinone/plastoquinone oxidoreductase [Brucella abortus NCTC
8038]
gi|260153860|gb|EEW88952.1| NADH-ubiquinone/plastoquinone oxidoreductase [Brucella melitensis
bv. 1 str. 16M]
gi|260156143|gb|EEW91223.1| NADH-ubiquinone/plastoquinone oxidoreductase [Brucella suis bv. 4
str. 40]
gi|260668104|gb|EEX55044.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
abortus bv. 4 str. 292]
gi|260672043|gb|EEX58864.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
abortus bv. 2 str. 86/8/59]
gi|260674673|gb|EEX61494.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
abortus bv. 6 str. 870]
gi|260873120|gb|EEX80189.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
abortus bv. 9 str. C68]
gi|260915421|gb|EEX82282.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
abortus bv. 3 str. Tulya]
gi|260920585|gb|EEX87238.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella ceti
B1/94]
gi|260923918|gb|EEX90486.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella ceti
M13/05/1]
gi|261294362|gb|EEX97858.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella ceti
M644/93/1]
gi|261296688|gb|EEY00185.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
pinnipedialis B2/94]
gi|261300903|gb|EEY04400.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
neotomae 5K33]
gi|261303463|gb|EEY06960.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
pinnipedialis M163/99/10]
gi|261738003|gb|EEY25999.1| NADH dehydrogenase subunit J [Brucella sp. F5/99]
gi|261741885|gb|EEY29811.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella suis
bv. 5 str. 513]
gi|261744545|gb|EEY32471.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella suis
bv. 3 str. 686]
gi|262552433|gb|EEZ08423.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella ceti
M490/95/1]
gi|262765865|gb|EEZ11654.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
melitensis bv. 3 str. Ether]
gi|263001698|gb|EEZ14273.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
melitensis bv. 1 str. Rev.1]
gi|263094392|gb|EEZ18237.1| NADH-ubiquinone/plastoquinone oxidoreductase [Brucella melitensis
bv. 2 str. 63/9]
gi|264660698|gb|EEZ30959.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella
pinnipedialis M292/94/1]
gi|294820757|gb|EFG37756.1| NADH dehydrogenase I subunit J [Brucella sp. NVSL 07-0026]
gi|297175334|gb|EFH34681.1| NADH dehydrogenase I subunit J [Brucella abortus bv. 5 str. B3196]
gi|326408834|gb|ADZ65899.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Brucella
melitensis M28]
gi|326538550|gb|ADZ86765.1| NADH-quinone oxidoreductase subunit J [Brucella melitensis M5-90]
Length = 205
Score = 130 bits (328), Expect = 8e-29, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 116/190 (61%), Gaps = 4/190 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ I S+F+V+ RNP++SV LI F NAA LFLL GAEF+AMI LVVYVGAV V FLF+
Sbjct: 16 IMIASAFMVIAARNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLVVYVGAVAVLFLFV 75
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG----N 129
+MMLD+D + + +G++ ++ +F+ + L
Sbjct: 76 VMMLDVDFAELKRGALQYAPVGALVGLILLGELIFVFASRMFTPKLGQGALPIPDVATRT 135
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIV 189
N +G +LYT Y + +++G +LL++MIGAIVL +RH+ ++KRQ I Q+ P+ +I
Sbjct: 136 NTAALGDILYTHYVFYFQVAGLVLLVAMIGAIVLTMRHKPNVKRQSIPAQVARTPETAIE 195
Query: 190 MVKVKSGKGI 199
+ KV++GKGI
Sbjct: 196 IRKVETGKGI 205
>gi|306843748|ref|ZP_07476347.1| NADH dehydrogenase subunit J [Brucella sp. BO1]
gi|306275939|gb|EFM57652.1| NADH dehydrogenase subunit J [Brucella sp. BO1]
Length = 205
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 78/190 (41%), Positives = 117/190 (61%), Gaps = 4/190 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ I S+F+V+ RNP++SV LI F NAA LFLL GAEF+AMI LVVYVGAV V FLF+
Sbjct: 16 IMIASAFMVIAARNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLVVYVGAVAVLFLFV 75
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG----N 129
+MMLD+D + + +G++ ++ +F+ + L
Sbjct: 76 VMMLDVDFAELKRGALQYAPVGALVGLILLGELIFVFASRMFTPKLGQGALPIPDVATRT 135
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIV 189
N +G +LYT Y + +++G +LL++MIGAIVL +RH+ ++KRQ IS Q+ P+ +I
Sbjct: 136 NTAALGDILYTHYVFYFQVAGLVLLVAMIGAIVLTMRHKPNVKRQSISAQVARTPETAIE 195
Query: 190 MVKVKSGKGI 199
+ KV++GKGI
Sbjct: 196 IRKVETGKGI 205
>gi|329889340|ref|ZP_08267683.1| NADH-quinone oxidoreductase subunit J [Brevundimonas diminuta ATCC
11568]
gi|328844641|gb|EGF94205.1| NADH-quinone oxidoreductase subunit J [Brevundimonas diminuta ATCC
11568]
Length = 207
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 4/201 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
MQ L FYL + +A++S+ LVVT RNP++SV LI F +AAGLF+LL AEF+AM+ +VVY
Sbjct: 1 MQGLAFYLLATVAVVSALLVVTARNPVHSVLWLILTFFSAAGLFVLLSAEFLAMLLVVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV----FSAE 118
VGAV V FLF++MMLD+D R + + + ++ S +V
Sbjct: 61 VGAVAVLFLFVVMMLDVDFVKLREGYARYLPLAGIVAGVLLAEMIMVSITVVQGGAARDA 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
N+E IG+VLYT Y Y + +G +LL++MIGAIVL LRHR + RQD++
Sbjct: 121 TSPVPAGPDVTNIETIGRVLYTDYVYFFQAAGVVLLIAMIGAIVLTLRHRPGVHRQDLAA 180
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
Q ++ + V +G+G+
Sbjct: 181 QANRERAKAVEIKSVTTGQGV 201
>gi|153009742|ref|YP_001370957.1| NADH dehydrogenase subunit J [Ochrobactrum anthropi ATCC 49188]
gi|151561630|gb|ABS15128.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Ochrobactrum
anthropi ATCC 49188]
Length = 205
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 76/190 (40%), Positives = 118/190 (62%), Gaps = 4/190 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ I S+F+V+ RNP++SV LI F NAA LFLL GAEF+AMI LVVYVGAV V FLF+
Sbjct: 16 IMIASAFMVIAARNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLVVYVGAVAVLFLFV 75
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE----GELSRLVFKGN 129
+MMLD+D + + +G++ ++ +F+ + + + +
Sbjct: 76 VMMLDVDFSELKRGALQYAPVGALVGLILLGELIFVFASNMFAPKLGQGAVPIPNIAERS 135
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIV 189
N +G +LYT + + +++G +LL++MIGAIVL LRH+ ++KRQ I Q+ P+ +I
Sbjct: 136 NTAALGDILYTDFVFYFQVAGLVLLVAMIGAIVLTLRHKPNVKRQSIPTQVARTPETAIE 195
Query: 190 MVKVKSGKGI 199
+ KV++GKGI
Sbjct: 196 IKKVETGKGI 205
>gi|296444803|ref|ZP_06886766.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylosinus
trichosporium OB3b]
gi|296257751|gb|EFH04815.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylosinus
trichosporium OB3b]
Length = 200
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 117/200 (58%), Gaps = 3/200 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FFYLFS + I S+F V+ RNP++SV LI AFVN AGLFLL GAEF+AMI +VVY
Sbjct: 1 MAAAFFYLFSAVLIASAFAVIVARNPVHSVLFLILAFVNGAGLFLLAGAEFLAMILVVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG---ILAAELIVCASNFMVFSAEG 119
VGAV V FLF++MMLD+D + +G ++ +I + E
Sbjct: 61 VGAVAVLFLFVVMMLDVDFAELRQGFSKHLPLGAGVGAVVLIELGMIAVGWQSAPSALEA 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ + +N +G+VLYT+Y + S +LL +MIGAIVL L HR +KRQ I++Q
Sbjct: 121 AQTPIAAGVSNTAALGQVLYTKYFVFFQASALVLLTAMIGAIVLTLHHRPGVKRQKIAEQ 180
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+N I + KV S G+
Sbjct: 181 NARTRENVIEIKKVPSRAGV 200
>gi|332528760|ref|ZP_08404737.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Hylemonella
gracilis ATCC 19624]
gi|332041826|gb|EGI78175.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Hylemonella
gracilis ATCC 19624]
Length = 217
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 69/201 (34%), Positives = 121/201 (60%), Gaps = 4/201 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++ FF+LFS + +I++ VVT RNP+++V L+ AF A+ ++LLL AEF+A+ ++
Sbjct: 1 MDVKTGFFFLFSAVLLIAALRVVTARNPVHAVLFLMLAFSQASAIWLLLQAEFLAVALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+GAV+V FLF++MMLDI I+ + + +G + + + +
Sbjct: 61 VYLGAVMVLFLFVVMMLDIRIDQLRQGFWKHLPLALLLGGIVVVEMAAVLLTGFDMVDPQ 120
Query: 121 LSRL----VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
++ V + +N + +G +LYT+Y +P++I+ ILL++MI AI L LR R+D K D
Sbjct: 121 VAAQLPAGVAEESNAKALGILLYTRYVWPIQIAAAILLVAMIAAIALTLRARKDSKAIDP 180
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
S Q+ + + +VKV+ +
Sbjct: 181 SIQVRVRAADRLQLVKVEPTR 201
>gi|325915548|ref|ZP_08177859.1| NADH dehydrogenase subunit J [Xanthomonas vesicatoria ATCC 35937]
gi|325538264|gb|EGD09949.1| NADH dehydrogenase subunit J [Xanthomonas vesicatoria ATCC 35937]
Length = 220
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M S+ FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 2 MDWVSIAFYAFSAIAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 61
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 62 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKSRTATPF 121
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ E + IL ++++ A++L LR R IK Q+
Sbjct: 122 PVDNAAAQAADSSNLTWLAKSLYTEFLLAFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 181
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
S+Q + + +VK+ K +
Sbjct: 182 SEQSRVKAGDRLRIVKMAVEKPV 204
>gi|115278617|ref|YP_762486.1| NADH dehydrogenase subunit 6 [Tripsacum dactyloides]
gi|114432108|gb|ABI74657.1| NADH dehydrogenase subunit 6 [Tripsacum dactyloides]
Length = 333
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 59/185 (31%), Positives = 92/185 (49%), Gaps = 13/185 (7%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLGLDFSAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL----- 124
FLF++MM +I I R S IG++ + +
Sbjct: 65 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLGY 124
Query: 125 ------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR--DIKRQDI 176
V N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTIHMVKRQDV 184
Query: 177 SKQLE 181
++
Sbjct: 185 FRRNA 189
>gi|158423301|ref|YP_001524593.1| NADH ubiquinone oxidoreductase chain J protein [Azorhizobium
caulinodans ORS 571]
gi|158330190|dbj|BAF87675.1| NADH ubiquinone oxidoreductase chain J protein [Azorhizobium
caulinodans ORS 571]
Length = 202
Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats.
Identities = 88/202 (43%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FFYLF+ + + S+F+V++ RNP+YSV LI AFVNAAGLF+LLG EF+A+I +V
Sbjct: 1 MSFAAAFFYLFACILVGSAFMVISSRNPVYSVLFLILAFVNAAGLFILLGVEFLALILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + +G++ +V
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFVELRQGFLQYLPVGAIVGLIFLAELVLVVGTWAAGPGVT 120
Query: 121 LSRLV---FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
++ + N +G+VLYT Y Y +I+GF+LL++MIGAIVL LRH+ ++KRQ+IS
Sbjct: 121 VATNAVMTYPRGNTHALGQVLYTDYIYFFQIAGFVLLVAMIGAIVLTLRHKPNVKRQNIS 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ P+ ++ +VKVK G+GI
Sbjct: 181 AQVARTPETAMEVVKVKPGQGI 202
>gi|194366595|ref|YP_002029205.1| NADH dehydrogenase subunit J [Stenotrophomonas maltophilia R551-3]
gi|194349399|gb|ACF52522.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Stenotrophomonas maltophilia R551-3]
Length = 218
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/203 (29%), Positives = 108/203 (53%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ F++F+ A +S+ V++VRNP+++V L+ F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVNIAFWVFAIAATVSAGAVISVRNPVHAVLCLVLTFFSIACVWLLVGAEFLGVALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFS 116
VYVGAV+V FLF++MMLDID R + + ++ +
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDPTKLREGWVRYLPVGLIVAVAMLVQMLILIGVKGRAVTPF 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ L +NV + + L+T+Y P E + IL ++++ A++L LR R +K Q+
Sbjct: 121 PADNAAALAADSSNVTWLARTLFTEYLLPFEFAAVILTVAVVAAVMLTLRRRTGVKSQNP 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q D + MVK+ + +
Sbjct: 181 GEQTMVKADQRLRMVKMGAEAPV 203
>gi|239946839|ref|ZP_04698592.1| NADH-quinone oxidoreductase subunit J [Rickettsia endosymbiont of
Ixodes scapularis]
gi|239921115|gb|EER21139.1| NADH-quinone oxidoreductase subunit J [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 205
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 82/197 (41%), Positives = 116/197 (58%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + IS VV +N +YSV LIFAF+N AGL +LLGAEF+AM+ +V+YVGA
Sbjct: 3 IFFYLFATLITISGLCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V V FLF+IMMLD+ + K S FI ++ +V +
Sbjct: 63 VAVLFLFVIMMLDMHFNKTITQLKENLALSIFIALIMFADLVTVILLGTKNINFSSDISF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IG VLYT + P +++G IL ++MI I L L+ R +KRQDISKQL
Sbjct: 123 AITNNISNTKAIGGVLYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKRQDISKQLRH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N +N+++M K KG+
Sbjct: 183 NKENTVLMTKPILNKGV 199
>gi|83592899|ref|YP_426651.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Rhodospirillum rubrum ATCC 11170]
gi|83575813|gb|ABC22364.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Rhodospirillum rubrum ATCC 11170]
Length = 205
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 123/204 (60%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++Q+L FY+ + + + S+F+VV RNP++SV LI FVN+AGLFLL+GAEFVAM+ +V
Sbjct: 1 MIIQALIFYMLAAIMVASAFMVVISRNPVHSVLWLILTFVNSAGLFLLMGAEFVAMVVVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLDI+ +G++ I + + +
Sbjct: 61 VYVGAVAVLFLFVVMMLDINYLRLREGFLSYMPLGAAMGVVLLAEIAVLAGGWAMAPDAM 120
Query: 121 LSRLVFKGNN-----VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
R V + + IG+VLYT Y Y + +G +LL++MIG+I+L R +KRQ+
Sbjct: 121 GLRRVPMVDPAALTNTQAIGQVLYTDYIYLFQAAGLVLLVAMIGSIMLTHRANPLVKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
++ Q+ + ++ + KV +G+GI
Sbjct: 181 VADQIARRKERTLKLNKVPTGRGI 204
>gi|114330934|ref|YP_747156.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Nitrosomonas
eutropha C91]
gi|114307948|gb|ABI59191.1| NADH dehydrogenase subunit J [Nitrosomonas eutropha C91]
Length = 201
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 68/199 (34%), Positives = 118/199 (59%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ Q FY + + II + V+T+RNP+YSV L+ AFV ++GL++LL AEF+A+ +V
Sbjct: 1 MIFQDFVFYSLASVVIICALGVITLRNPVYSVLLLVLAFVTSSGLWILLEAEFLAIALVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI+++ + F + + + FS+E
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDQMREGFWKWFPFGAILAFIMTVEMSMVLMSKQFSSEII 120
Query: 121 LSRL--VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ +N + +G+++YT+Y Y E++ ILL++M+ AI + LRHR D K + S+
Sbjct: 121 QTPEYKSVDYSNTKELGRLIYTEYVYVFELAAVILLVAMVAAIAITLRHRTDKKSSNASR 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ + + + ++ + + K
Sbjct: 181 QIAVSRNERLKVISMPAEK 199
>gi|254718920|ref|ZP_05180731.1| NADH dehydrogenase subunit J [Brucella sp. 83/13]
gi|265983907|ref|ZP_06096642.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella sp.
83/13]
gi|306838232|ref|ZP_07471084.1| NADH dehydrogenase subunit J [Brucella sp. NF 2653]
gi|264662499|gb|EEZ32760.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Brucella sp.
83/13]
gi|306406676|gb|EFM62903.1| NADH dehydrogenase subunit J [Brucella sp. NF 2653]
Length = 205
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 115/190 (60%), Gaps = 4/190 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ I S+F+V+ RNP++SV LI F NAA LFLL GAEF+AMI LVVYVGAV V FLF+
Sbjct: 16 IMIASAFMVIAARNPVHSVLFLILTFFNAAALFLLTGAEFLAMILLVVYVGAVAVLFLFV 75
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG----N 129
+MMLD+D + + +G++ ++ +F+ + L
Sbjct: 76 VMMLDVDFAELKRGALQYAPVGALVGLILLGELIFVFASRMFTPKLGQGALPIPDVATRT 135
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIV 189
N +G +LYT Y + +++G +LL++MIGAIVL +RH+ ++KRQ I Q+ P+ +I
Sbjct: 136 NTAALGDILYTHYVFYFQVAGLVLLVAMIGAIVLTMRHKPNVKRQSIPAQVARTPETAIE 195
Query: 190 MVKVKSGKGI 199
+ KV+ GKGI
Sbjct: 196 IRKVEMGKGI 205
>gi|78485171|ref|YP_391096.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Thiomicrospira crunogena XCL-2]
gi|78363457|gb|ABB41422.1| NADH dehydrogenase I chain J [Thiomicrospira crunogena XCL-2]
Length = 211
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 57/201 (28%), Positives = 103/201 (51%), Gaps = 4/201 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FYL + +++ S+ +V++V+NP+ + L+ F+ AG++L AEF+ ++ ++
Sbjct: 1 MTFEQFIFYLLAGISVFSALMVISVKNPVKAALWLVLTFIATAGVWLTAQAEFLGLVLIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MMLDI++ + R L+
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLAQLKEGFTRYLPLGVLAATAIFALMYLVLGPERFGLEQF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR--RDIKRQDI 176
+ +N ++I LYT + Y ++ +LL+ ++ AI L LR R +++ QDI
Sbjct: 121 AAPQSAGGEYSNTKSIAVPLYTTHVYAFILAAVLLLVGIVAAITLTLRRRPPKEVLYQDI 180
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
KQ+ + MVK+ + K
Sbjct: 181 DKQVRVQASDRFKMVKMDAVK 201
>gi|258651225|ref|YP_003200381.1| NADH dehydrogenase subunit J [Nakamurella multipartita DSM 44233]
gi|258554450|gb|ACV77392.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nakamurella
multipartita DSM 44233]
Length = 293
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 37/200 (18%), Positives = 95/200 (47%), Gaps = 6/200 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + F++ + +A++ + +V ++ ++S L+ ++ L++ AEF+ + ++VY
Sbjct: 25 AELIAFWILAPLAVLGAIGMVFSKSAVHSALWLVLTMLSLGCLYINQNAEFLGFVQIIVY 84
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPR-KKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
GA+++ FLF++M+ D + ++ + + +GI L+V + +
Sbjct: 85 TGAIMMLFLFVLMLTGRDSGDSTFEVLRKQRIVAIVLGIGFVVLLVTGLLRALKAVPAVG 144
Query: 122 -SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
S + I ++L+T Y +P E++ +L+ + GA+VL + +R+ +++
Sbjct: 145 LSGAYADRGPLGAIAELLFTDYLFPFELTSALLITAATGAMVLTHIEKAPGERKSQGQRV 204
Query: 181 E-SNPDNSIVMVKVKSGKGI 199
+ + G G+
Sbjct: 205 RERMRSDRM---SPLPGPGV 221
>gi|225024113|ref|ZP_03713305.1| hypothetical protein EIKCOROL_00981 [Eikenella corrodens ATCC
23834]
gi|224943138|gb|EEG24347.1| hypothetical protein EIKCOROL_00981 [Eikenella corrodens ATCC
23834]
Length = 225
Score = 128 bits (322), Expect = 4e-28, Method: Composition-based stats.
Identities = 60/198 (30%), Positives = 113/198 (57%), Gaps = 3/198 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + FYL + + + + VTV+NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MNFQLILFYLLAAIILFGALKTVTVKNPVHAALYLVLTFCMSAMMWMLMQAEFLGITLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL--AAELIVCASNFMVFSAE 118
VYVGAV+V FLF++MML+ID+E R + +G+L A +++ + +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDVEEMRKGFWRNAPVAAVVGVLMAVALIMILVAPATDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G+++ + +NV +G +YT Y P E++ +L+L M+ AI L+ R K + +
Sbjct: 121 GQMNDVPADHSNVRELGTQIYTTYLLPFELAAVLLVLGMVAAIALVHRKTFKPKYINPAD 180
Query: 179 QLESNPDN-SIVMVKVKS 195
Q++ + + MVK+++
Sbjct: 181 QVKVDAKKGRLRMVKMEA 198
>gi|77166014|ref|YP_344539.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Nitrosococcus oceani ATCC 19707]
gi|254436307|ref|ZP_05049813.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Nitrosococcus oceani AFC27]
gi|76884328|gb|ABA59009.1| NADH dehydrogenase subunit J [Nitrosococcus oceani ATCC 19707]
gi|207087997|gb|EDZ65270.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Nitrosococcus oceani AFC27]
Length = 201
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 117/197 (59%), Gaps = 3/197 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ FY+F+ + + ++ +VVTVRNP+ + L+ AF +A ++LLL AEF+A++ ++VY
Sbjct: 1 MEKTLFYIFAAILLFAATMVVTVRNPVRAALFLVLAFFTSAAIWLLLEAEFLAIVLVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+GAV+V FLF++MMLD+++ + R F + +L A ++ F + +
Sbjct: 61 IGAVMVLFLFVVMMLDMNLAPLQEGFARYLPVGFLVAVLIAIEMIIVLGSKNFGLDQFTA 120
Query: 123 RLV--FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+N + +G +LYT Y YP E++ ILL++++ AI L LR R K QD ++Q+
Sbjct: 121 PASRGADYSNTKELGNLLYTVYVYPFELASVILLVAIVAAIALALRRRP-SKAQDPAQQV 179
Query: 181 ESNPDNSIVMVKVKSGK 197
P + + +VK+ + K
Sbjct: 180 RVRPQDRVRLVKMAAEK 196
>gi|294670449|ref|ZP_06735331.1| hypothetical protein NEIELOOT_02168 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307913|gb|EFE49156.1| hypothetical protein NEIELOOT_02168 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 225
Score = 128 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 60/198 (30%), Positives = 114/198 (57%), Gaps = 3/198 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + FYL + + + + VTV+NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MNFQLILFYLLAAIILFGALKTVTVKNPVHAALYLVLTFCMSAMMWMLMQAEFLGITLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL--AAELIVCASNFMVFSAE 118
VYVGAV+V FLF++MML+ID+E R + +G+L A +++ + +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDVEEMRKGFWRNAPVAAVVGVLMAVALIMILVAPATDLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G+++ + +NV +G +YT Y P E++ +L+L M+ AI L+ R K + +
Sbjct: 121 GQMNDVPADHSNVRELGTQIYTTYLLPFELAAVLLVLGMVAAIALVHRKTFKPKYINPAD 180
Query: 179 QLESNPDN-SIVMVKVKS 195
Q++ + + + MVK+++
Sbjct: 181 QVKVDANKGRLRMVKMEA 198
>gi|190575269|ref|YP_001973114.1| NADH dehydrogenase subunit J [Stenotrophomonas maltophilia K279a]
gi|190013191|emb|CAQ46824.1| putative NADH-ubiquinone oxidoreductase, chain J [Stenotrophomonas
maltophilia K279a]
Length = 218
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 57/203 (28%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ F++F+ A +S+ V++VRNP+++V L+ F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVNIAFWVFAIAATVSAGAVISVRNPVHAVLCLVLTFFSIACVWLLVGAEFLGVALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFS 116
VYVGAV+V FLF++MMLDID R + + ++ +
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDPTKMREGWVRYLPVGLIVAVAMLVQMLILIGVKGRAVTPF 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + +NV + + L+T+Y P E + IL ++++ A++L LR R +K Q+
Sbjct: 121 PADNAAAVAADSSNVTWLARTLFTEYLLPFEFAAVILTVAVVAAVMLTLRRRTGVKSQNP 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q + MVK+ + +
Sbjct: 181 GEQTMVKAGQRLRMVKMGAEAPV 203
>gi|229587152|ref|YP_002845653.1| NADH dehydrogenase subunit J [Rickettsia africae ESF-5]
gi|228022202|gb|ACP53910.1| NADH dehydrogenase I chain J [Rickettsia africae ESF-5]
Length = 205
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + ISS VV +N +YSV LIFAF+N AGL +LLGAEF+AM+ +V+YVGA
Sbjct: 3 IFFYLFATLITISSVCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V V FLF+IMMLD+ + K S FI ++ +V + +
Sbjct: 63 VAVLFLFVIMMLDMHFNKKITQLKANLALSIFIALIMFADLVIIILLGTKNINFNSNVSF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IG VLYT + P +++G IL ++MI I L L+ R +KRQDISKQL
Sbjct: 123 TITNNISNTKAIGGVLYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKRQDISKQLRH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N +N+++M K KG+
Sbjct: 183 NKENTVLMTKPILNKGV 199
>gi|120609959|ref|YP_969637.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Acidovorax
citrulli AAC00-1]
gi|120588423|gb|ABM31863.1| NADH dehydrogenase subunit J [Acidovorax citrulli AAC00-1]
Length = 222
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 80/205 (39%), Positives = 123/205 (60%), Gaps = 8/205 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F V+T RNP+++V LI AF AA ++LLL AEF+A+ L+
Sbjct: 1 MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAAIWLLLKAEFLAIALLL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+GAV+V FLF++MMLDI I+ R F + FIG L A + +
Sbjct: 61 VYLGAVMVLFLFVVMMLDIHIDTVRQGFWRHFPLAAFIGALIALEMAAVLMGGFRGMDEP 120
Query: 121 L--------SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ V + +N + +GK+LYT+Y YP+EI+ ILL++MI AI L LR R+D K
Sbjct: 121 KAVAAMVDAAGNVVQYSNTKALGKLLYTEYLYPVEIAAVILLVAMIAAIALTLRQRKDTK 180
Query: 173 RQDISKQLESNPDNSIVMVKVKSGK 197
+S+Q+ + + +VKV + +
Sbjct: 181 VTKVSEQVRVRAADRVELVKVAATQ 205
>gi|254521117|ref|ZP_05133172.1| NADH-ubiquinone oxidoreductase Nqo10 subunit [Stenotrophomonas sp.
SKA14]
gi|219718708|gb|EED37233.1| NADH-ubiquinone oxidoreductase Nqo10 subunit [Stenotrophomonas sp.
SKA14]
Length = 218
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 57/203 (28%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ F++F+ A +S+ V++VRNP+++V L+ F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVNIAFWVFAIAATVSAGAVISVRNPVHAVLCLVLTFFSIACVWLLVGAEFLGVALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF----MVFS 116
VYVGAV+V FLF++MMLDID R + + ++ +
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDPTKLREGWVRYLPVGLIVAVAMLVQMLVLIGVKARSVTPF 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + +NV + + L+T+Y P E + IL ++++ A++L LR R +K Q+
Sbjct: 121 PADNAAAVAADSSNVTWLARTLFTEYLLPFEFAAVILTVAVVAAVMLTLRRRTGVKSQNP 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q + MVK+ + +
Sbjct: 181 GEQTMVKAGQRLRMVKMGAEAPV 203
>gi|224824814|ref|ZP_03697921.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Lutiella
nitroferrum 2002]
gi|224603307|gb|EEG09483.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Lutiella
nitroferrum 2002]
Length = 214
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 61/199 (30%), Positives = 112/199 (56%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ S + I + V+T +NP+++ L+ AF +AG +LLL +EF+A+ ++
Sbjct: 1 MSFPTVVFYVLSAILIFAGLRVITAKNPVHAALYLVLAFFTSAGHWLLLESEFLAISLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MMLDI+ E + + +G++ +V +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINFEKLREGFWKNAPLAGTVGLIMVGEMVLILMSPEASLGSY 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ L +N+ +G+++YT Y +P E++ +LL+ M+ AI L +R R+D K +
Sbjct: 121 KGAAPLAADASNIRELGRLIYTTYLWPFELAAVVLLVGMVAAIALTMRKRKDTKFVNPGD 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ D+ + +VK+ + K
Sbjct: 181 QVVVRRDDRVRLVKMAAVK 199
>gi|294814403|ref|ZP_06773046.1| NADH-quinone oxidoreductase subunit J [Streptomyces clavuligerus
ATCC 27064]
gi|326442793|ref|ZP_08217527.1| NADH:ubiquinone oxidoreductase subunit J [Streptomyces clavuligerus
ATCC 27064]
gi|294327002|gb|EFG08645.1| NADH-quinone oxidoreductase subunit J [Streptomyces clavuligerus
ATCC 27064]
Length = 305
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 92/190 (48%), Gaps = 7/190 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A++ + + ++ ++S L V A +L GA F+ ++ +VV
Sbjct: 17 TGEAVQFWVLGTVAVLGALCTILMKRAVHSALCLAGTMVVLAVFYLANGAYFLGVVQIVV 76
Query: 62 YVGAVIVFFLFIIMMLDIDIEVA--EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
Y GA+++ FLF++M++ + + E K + +L + L+ N + G
Sbjct: 77 YTGAIMMLFLFVVMLVGVTAADSLKETLKGQRWLAALCGLGFGVLLVAGLGNASLNEFNG 136
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ G NVE + +++T+Y + EI+G +L+ + +GA+VL R R + ++
Sbjct: 137 LGAANSEHGGNVEGLAALIFTKYVFAFEITGALLITATVGAMVLTHRERTE-----QART 191
Query: 180 LESNPDNSIV 189
+ +
Sbjct: 192 QREQAEERVR 201
>gi|254391146|ref|ZP_05006353.1| NADH dehydrogenase subunit J [Streptomyces clavuligerus ATCC 27064]
gi|197704840|gb|EDY50652.1| NADH dehydrogenase subunit J [Streptomyces clavuligerus ATCC 27064]
Length = 296
Score = 127 bits (320), Expect = 7e-28, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 92/190 (48%), Gaps = 7/190 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A++ + + ++ ++S L V A +L GA F+ ++ +VV
Sbjct: 8 TGEAVQFWVLGTVAVLGALCTILMKRAVHSALCLAGTMVVLAVFYLANGAYFLGVVQIVV 67
Query: 62 YVGAVIVFFLFIIMMLDIDIEVA--EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
Y GA+++ FLF++M++ + + E K + +L + L+ N + G
Sbjct: 68 YTGAIMMLFLFVVMLVGVTAADSLKETLKGQRWLAALCGLGFGVLLVAGLGNASLNEFNG 127
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ G NVE + +++T+Y + EI+G +L+ + +GA+VL R R + ++
Sbjct: 128 LGAANSEHGGNVEGLAALIFTKYVFAFEITGALLITATVGAMVLTHRERTE-----QART 182
Query: 180 LESNPDNSIV 189
+ +
Sbjct: 183 QREQAEERVR 192
>gi|296136697|ref|YP_003643939.1| hypothetical protein Tint_2259 [Thiomonas intermedia K12]
gi|295796819|gb|ADG31609.1| hypothetical protein Tint_2259 [Thiomonas intermedia K12]
Length = 219
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 118/205 (57%), Gaps = 10/205 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q++ FYLFS + + ++ V+T RNP++S L+ AF + ++LLL AEF+A++ ++
Sbjct: 11 MDVQTILFYLFSAVLLFAALRVITARNPVHSALYLVLAFFQMSAIWLLLRAEFLAIVLVL 70
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA----------S 110
VYVGAV+V FLF++MMLDI+++ R F + +G+L + +
Sbjct: 71 VYVGAVMVLFLFVVMMLDINLDSIRKGFWRYFPVAALVGVLIVLEMAAVLMQGFQIGGMT 130
Query: 111 NFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
A + +N +G VLY+QY + +EI+ ILL+++I AI L LR R+D
Sbjct: 131 RAAQVGAAASADNPLTHLSNTRALGVVLYSQYLFAVEIAAVILLVAIIAAIALTLRRRKD 190
Query: 171 IKRQDISKQLESNPDNSIVMVKVKS 195
++ S+Q+++ + + +V + +
Sbjct: 191 VRHMPASEQIKARRADRVRLVSMPA 215
>gi|332968225|gb|EGK07302.1| NADH-quinone oxidoreductase subunit J [Kingella kingae ATCC 23330]
Length = 215
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 63/198 (31%), Positives = 111/198 (56%), Gaps = 3/198 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY+F+ + + + VT +NP+++ L+ F +A ++LL+ AEF+ + +V
Sbjct: 1 MTFSLVLFYMFAAIILYGALQTVTAKNPVHATLHLVLTFCVSAMMWLLMQAEFLGITLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--MVFSAE 118
VYVGAV+V FLF++MML+ID E R + +G+L A +++ +
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDAEEMRKGFWRHAPAALTVGVLMAAVLIAVLVAPDTALNQF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + +NV ++GK LYT Y + E++ +L+L M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYSNVRDLGKQLYTTYVWQFELAAVLLVLGMVAAIALVHRKSTNPKRIDPAD 180
Query: 179 QLESNPDN-SIVMVKVKS 195
Q++ N + MVK++S
Sbjct: 181 QVKVNAAEGRMRMVKMES 198
>gi|15893147|ref|NP_360861.1| NADH dehydrogenase subunit J [Rickettsia conorii str. Malish 7]
gi|238650810|ref|YP_002916665.1| NADH dehydrogenase subunit J [Rickettsia peacockii str. Rustic]
gi|20139034|sp|Q92G99|NUOJ_RICCN RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|15620356|gb|AAL03762.1| NADH dehydrogenase I chain J [Rickettsia conorii str. Malish 7]
gi|238624908|gb|ACR47614.1| NADH dehydrogenase subunit J [Rickettsia peacockii str. Rustic]
Length = 205
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + ISS VV +N +YSV LIFAF+N AGL +LLGAEF+AM+ +V+YVGA
Sbjct: 3 IFFYLFATLITISSVCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V V FLF+IMMLD+ + K S FI ++ +V + +
Sbjct: 63 VAVLFLFVIMMLDMHFNKTITQLKANLALSIFIALIMFADLVIIILLGTKNINFNSNVSF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IG VLYT + P +++G IL ++MI I L L+ R +KRQDISKQL
Sbjct: 123 TITNNISNTKAIGGVLYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKRQDISKQLRH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N +N+++M K KG+
Sbjct: 183 NKENTVLMTKPILNKGV 199
>gi|329118914|ref|ZP_08247609.1| NADH-quinone oxidoreductase subunit J [Neisseria bacilliformis ATCC
BAA-1200]
gi|327464942|gb|EGF11232.1| NADH-quinone oxidoreductase subunit J [Neisseria bacilliformis ATCC
BAA-1200]
Length = 218
Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 113/198 (57%), Gaps = 3/198 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + FY + + + + VTV+NP+++ L+ F +A +++L+ AEF+ + +V
Sbjct: 1 MSFQLIMFYTLAAIILFGALKTVTVKNPVHAALYLVLTFCMSAMMWMLMQAEFLGITLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL--AAELIVCASNFMVFSAE 118
VYVGAV+V FLF++MML+ID+E R + +G+L A +++ S +A
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDVEEMRKGFWRNAPVAATVGVLMAVALILILVSPKTNLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + +NV +G+ +YT Y P E++ +LLL M+ AI L+ R + KR D ++
Sbjct: 121 GAMVDVPADHSNVRELGRQIYTTYMLPFELAAVLLLLGMVAAIALVHRKSNNPKRMDPAE 180
Query: 179 QLESNPDN-SIVMVKVKS 195
Q++ + + +VK++
Sbjct: 181 QVKVDASKGRMKLVKMQP 198
>gi|15836917|ref|NP_297605.1| NADH dehydrogenase subunit J [Xylella fastidiosa 9a5c]
gi|9105137|gb|AAF83125.1|AE003884_10 NADH-ubiquinone oxidoreductase, NQO10 subunit [Xylella fastidiosa
9a5c]
Length = 222
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 109/203 (53%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FYLFS +A+ ++ V++VR+P+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 2 MDWVNIAFYLFSAVAVAAAGAVISVRHPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 61
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG- 119
VYVGAV+V FLF++MMLDID R + + +V + A
Sbjct: 62 VYVGAVMVLFLFVVMMLDIDTSRLREGWVRYLPVGLLVAGVMLVQMVVLIGVKMRMATPF 121
Query: 120 ---ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + L+T + +P E + IL +++I A++L LR R +K QD
Sbjct: 122 PVDNAAAQAAHTSNLTWLAHSLFTDFLFPFEFAAVILTVAVIAAVMLTLRKREGVKTQDP 181
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
S+Q + + +V + + + +
Sbjct: 182 SQQTRVKAADRLRIVSMPTEEPV 204
>gi|34581183|ref|ZP_00142663.1| NADH dehydrogenase I chain J [Rickettsia sibirica 246]
gi|28262568|gb|EAA26072.1| NADH dehydrogenase I chain J [Rickettsia sibirica 246]
Length = 205
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 82/197 (41%), Positives = 118/197 (59%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + ISS VV +N +YSV LIFAF+N AGL +LLGAEF+AM+ +V+YVGA
Sbjct: 3 IFFYLFATLITISSVCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V V FLF+IMMLD+ + K S FI ++ +V + +
Sbjct: 63 VAVLFLFVIMMLDMHFNKTITQLKANLALSIFIALIMFADLVIIILLGTKNINFNSNVSF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IG +LYT + P +++G IL ++MI I L L+ R +KRQDISKQL
Sbjct: 123 TITNNISNTKAIGGILYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKRQDISKQLRH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N +N+++M K KG+
Sbjct: 183 NKENTVLMTKPILNKGV 199
>gi|163855996|ref|YP_001630294.1| NADH-ubiquinone oxidoreductase, chain J [Bordetella petrii DSM
12804]
gi|163259724|emb|CAP42025.1| NADH-ubiquinone oxidoreductase, chain J [Bordetella petrii]
Length = 215
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 111/195 (56%), Gaps = 1/195 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + +I++F V+T R+P+ +V LI AF NAA L++LLGAEF+A++ ++
Sbjct: 1 MTFTTVLFYILAAVLVIAAFRVITARSPVTAVLHLILAFANAAMLWMLLGAEFLALLLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI I+ K IG + + + G
Sbjct: 61 VYVGAVMVLFLFVVMMLDIRIDTLRHGLKTYLPLGLLIGAVLVVEMSFVLGA-TWYGAGP 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + NN +G+V+YTQY Y +E+ +LL+ MI AI L LR RRD K D S +
Sbjct: 120 QASMAADYNNTRALGEVMYTQYVYAVEVGAALLLVGMIAAIALTLRRRRDAKYNDPSAAV 179
Query: 181 ESNPDNSIVMVKVKS 195
+ +V + +
Sbjct: 180 RVRAKDRFRLVSMPA 194
>gi|114707378|ref|ZP_01440275.1| NADH dehydrogenase subunit J [Fulvimarina pelagi HTCC2506]
gi|114537259|gb|EAU40386.1| NADH dehydrogenase subunit J [Fulvimarina pelagi HTCC2506]
Length = 205
Score = 127 bits (319), Expect = 9e-28, Method: Composition-based stats.
Identities = 77/189 (40%), Positives = 116/189 (61%), Gaps = 5/189 (2%)
Query: 16 IISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIM 75
+ S+ +VV +NP++SV LI FV AAGLFLL GAEF+A+I +VVYVGAV + FLF++M
Sbjct: 17 VGSALMVVLAKNPVHSVLFLILTFVAAAGLFLLAGAEFLALILIVVYVGAVAILFLFVVM 76
Query: 76 MLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF-----KGNN 130
MLD+D+ + R + I +L ++ A + + + +N
Sbjct: 77 MLDLDVGQLKSRAIQYAPFGAIIAVLLLAELIIAGSGTIADPVLASQTALPMAEAGGASN 136
Query: 131 VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVM 190
+E +G VLYT+Y +++G IL ++MIGAIVL LRH+ ++RQ I Q+ NP SI +
Sbjct: 137 IEALGNVLYTRYILFFQLAGLILFVAMIGAIVLTLRHKEKVRRQSIPDQVARNPSTSIEV 196
Query: 191 VKVKSGKGI 199
+V+SG+GI
Sbjct: 197 KQVESGRGI 205
>gi|296283849|ref|ZP_06861847.1| NADH dehydrogenase I, J subunit [Citromicrobium bathyomarinum
JL354]
Length = 206
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 119/204 (58%), Gaps = 6/204 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q++ FYLF+ M I S L + RNP++SV LI AF NAAGL +LLGAEF+AM+ +VV
Sbjct: 1 MIQAIAFYLFATMVIASGVLTIMSRNPVHSVLWLILAFFNAAGLMVLLGAEFIAMLLVVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-----GILAAELIVCASNFMVFS 116
YVGAV V FLF++MMLD+D+ + F I L + + +
Sbjct: 61 YVGAVAVLFLFVVMMLDVDMAELRAGFIKNFPLGIAIALVLLAELVLGIGALGAGPLELG 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK-RQD 175
+ +N+ENIG +LY++Y + E +G ILL++MIGAIVL R + + Q+
Sbjct: 121 TASGANAPNLANSNIENIGALLYSKYIFVFEAAGLILLVAMIGAIVLTHRDLKTTRGHQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I+KQ+ NP + M + G+G+
Sbjct: 181 ITKQVRRNPKEATQMKQPTVGEGV 204
>gi|91204900|ref|YP_537255.1| NADH dehydrogenase subunit J [Rickettsia bellii RML369-C]
gi|157827775|ref|YP_001496839.1| NADH dehydrogenase subunit J [Rickettsia bellii OSU 85-389]
gi|122426098|sp|Q1RKE8|NUOJ_RICBR RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|91068444|gb|ABE04166.1| NADH dehydrogenase I chain J [Rickettsia bellii RML369-C]
gi|157803079|gb|ABV79802.1| NADH dehydrogenase subunit J [Rickettsia bellii OSU 85-389]
Length = 205
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 85/197 (43%), Positives = 122/197 (61%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + IISS VV +N +YSV LIFAF+N +GL +LLGAEF+AM+ +V+YVGA
Sbjct: 3 IFFYLFTTLIIISSLCVVLSKNSVYSVLWLIFAFINGSGLMILLGAEFLAMMLIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V V FLF+IMMLD+ A + K + S F+ ++ +V +
Sbjct: 63 VAVLFLFVIMMLDMHFNKAIMQLKEKPILSIFVSLIMFADLVVIILLGTKNIHFSSDLSF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IGK+LYT + P +I+G IL ++MIG I L LR R +KRQ+I+KQL
Sbjct: 123 AIASDVSNTKAIGKILYTDFMIPFQIAGLILFVAMIGCITLTLRKRDGVKRQNIAKQLSH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N +N+++M K KGI
Sbjct: 183 NKENAVLMTKPLINKGI 199
>gi|186476755|ref|YP_001858225.1| NADH dehydrogenase subunit J [Burkholderia phymatum STM815]
gi|184193214|gb|ACC71179.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Burkholderia
phymatum STM815]
Length = 222
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 65/185 (35%), Positives = 103/185 (55%), Gaps = 6/185 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+F+ + +S V+T RNP+ S L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MDFTTVLFYIFALLLTVSGLKVITSRNPVSSALFLVLAFFNAAAIWMLLQAEFLAILLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV------ 114
VYVGAV+V FLF++MMLDI+++V KR + +G +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDVLRRDFKRFVPMATVVGAIIVIETALILWHGYGATVQP 120
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+N IGK++YT Y + E++G +LL+++I AI L RH +D KRQ
Sbjct: 121 VRDTTAAVAGAADWSNTRLIGKIIYTDYIFAFEVAGLVLLVAIIAAIALTTRHGKDSKRQ 180
Query: 175 DISKQ 179
+S Q
Sbjct: 181 RVSDQ 185
>gi|149184626|ref|ZP_01862944.1| NADH dehydrogenase I, J subunit [Erythrobacter sp. SD-21]
gi|148831946|gb|EDL50379.1| NADH dehydrogenase I, J subunit [Erythrobacter sp. SD-21]
Length = 206
Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 118/204 (57%), Gaps = 6/204 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q++ FY+F+ + I S+ +V+T RNP++SV LI AF NAAGL +L+GAEF+AM+ ++V
Sbjct: 1 MIQTIAFYMFAVLVIASAVMVITARNPVHSVLWLILAFFNAAGLMVLVGAEFIAMLLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----MVFS 116
YVGAV V FLF++MMLDIDI + I ++ +V M
Sbjct: 61 YVGAVAVLFLFVVMMLDIDIAAMRAGFVKNAPLGLVIALVLLAELVLGVGAYRVGVMELG 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK-RQD 175
+N IG +LYT+Y + E +G ILL++MIGAIVL R + + QD
Sbjct: 121 TPMASEAPAMMESNTGAIGALLYTKYLFLFEAAGIILLVAMIGAIVLTHRPPKTTRGHQD 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I KQ NPD + VM + G+G+
Sbjct: 181 IGKQNRRNPDEATVMKQPIVGEGV 204
>gi|226939465|ref|YP_002794538.1| NuoJ [Laribacter hongkongensis HLHK9]
gi|226714391|gb|ACO73529.1| NuoJ [Laribacter hongkongensis HLHK9]
Length = 211
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 68/199 (34%), Positives = 118/199 (59%), Gaps = 2/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + FY S + + + V+T +NP+++V L+ AF +AG +LL+ AEF+A+ ++
Sbjct: 1 MSFQLILFYALSVLLVYAGLRVITAKNPVHAVLHLVLAFFVSAGHWLLIEAEFLAIALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRG--FLGSFFIGILAAELIVCASNFMVFSAE 118
VYVGAV+V FLF++MMLDI+ E + F G + ++A V S S
Sbjct: 61 VYVGAVMVLFLFVVMMLDINFEKLREGFWKHLPFAGLVAVVLIAELAYVLTSPAAGLSDM 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ L +NV+++G+ +YT Y YP E++ +LLL+++ AI L R+R+D K D +
Sbjct: 121 PSPAALAADYSNVKDLGRQIYTVYLYPFELAAVLLLLAIVAAIALTQRNRKDTKWVDPAV 180
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q+ + ++ + +VK+++ K
Sbjct: 181 QVMARREDRVRIVKMQAVK 199
>gi|11466532|ref|NP_044781.1| NADH dehydrogenase subunit 6 [Reclinomonas americana]
gi|2258362|gb|AAD11896.1| NADH dehydrogenase subunit 6 [Reclinomonas americana]
Length = 205
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 10/202 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + FY FSF+A+ S+ LV+ NPI+SV L+ F + +GLF+L+ AEF+AMI ++V
Sbjct: 1 MTVEILFYFFSFLALSSATLVIASSNPIHSVLFLVLVFCSTSGLFILIEAEFIAMIFIMV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAA----------ELIVCASN 111
YVGA+ V FLF++MML++ + R IG++ + + N
Sbjct: 61 YVGAIAVLFLFVVMMLNVRLVQFNVNMLRYLPLGGVIGLIFLLELFLIIDSDLIPLFGLN 120
Query: 112 FMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
A + + + NVE IGK+LYT Y Y +SG ILL++MIGAIVL + R +
Sbjct: 121 INNNIAPFQWADTIDSITNVEAIGKLLYTHYFYLFLVSGMILLVAMIGAIVLTMYKRVGV 180
Query: 172 KRQDISKQLESNPDNSIVMVKV 193
+RQDI++QL + +I +
Sbjct: 181 RRQDINEQLSRDFKETIRLTSP 202
>gi|291004460|ref|ZP_06562433.1| NADH dehydrogenase subunit J [Saccharopolyspora erythraea NRRL
2338]
Length = 328
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 93/201 (46%), Gaps = 5/201 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F+ +A++ + +V RN ++S L+ + L++ A F+ ++V
Sbjct: 25 TGEAVVFWTLGPLALLGAMGMVFARNAVHSALWLVLTMLCLGVLYMAQSAPFLGFTQIIV 84
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFF---IGILAAELIVCASNFMVFSAE 118
Y GA+++ FLF++MM+ D + RG + +G + A +
Sbjct: 85 YTGAIMMLFLFVLMMVGRDSSDSVVEVLRGQRLAAALAGVGFAVLLVTGLARSLTDVPVA 144
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
L+ +G +G++++T Y +P E++ +L+ + +GA+VL + KR +S+
Sbjct: 145 APLNPWSPQGGGAGGLGRLIFTDYLFPFELTSALLITAALGAMVLAYGGKGRAKR--LSQ 202
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
+ ++ V G G+
Sbjct: 203 RDMADARFRSARVSPLPGPGV 223
>gi|188580276|ref|YP_001923721.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium populi BJ001]
gi|179343774|gb|ACB79186.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium populi BJ001]
Length = 206
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 120/204 (58%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FFYLF+ +A+ S F+V+ RNP+ SV LI AFVNAAGLF+++GAEF+AMI +V
Sbjct: 1 MTAAAAFFYLFASLAVASGFMVIAARNPVTSVLFLILAFVNAAGLFVMMGAEFLAMILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D +R IG + ++
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAALRQGFQRYLPIGGLIGAIFLIELLLVVGTWTIDPGLV 120
Query: 121 LSRL-----VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ L N E +G+VLYT Y Y +I+G ILL++MIGAIVL LR R +KRQ+
Sbjct: 121 QAPLGRAAHGETATNTEALGRVLYTDYVYAFQIAGLILLVAMIGAIVLTLRERTGVKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
IS Q ++ +KV S +G+
Sbjct: 181 ISVQNARTQTMAVDTIKVPSRQGV 204
>gi|71897863|ref|ZP_00680089.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Xylella
fastidiosa Ann-1]
gi|71732418|gb|EAO34472.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Xylella
fastidiosa Ann-1]
Length = 221
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FYLFS +A+ ++ V++VR+P+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVNIAFYLFSAVAVAAAGAVISVRHPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFS 116
VYVGAV+V FLF++MMLDID R + + +V +
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDTSRLREGWVRYLPVGLLVAGVMLVQMVVLIGVKMRMVTPF 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + L+T + +P E + IL +++I A++L LR R +K QD
Sbjct: 121 PVDNAAAQAADTSNLIWLAHSLFTDFLFPFEFAAVILTVAVIAAVMLTLRKREGVKTQDP 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q + + +V + + K I
Sbjct: 181 GQQTRVKSADRLRIVSMPTEKPI 203
>gi|307328630|ref|ZP_07607803.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
violaceusniger Tu 4113]
gi|306885742|gb|EFN16755.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
violaceusniger Tu 4113]
Length = 303
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++L F++ +A+I + + + ++S L + A +L GA F+ ++ +VV
Sbjct: 14 TGEALQFWVLGTVAVIGALCTILMHKAVHSALCLAGTMIVLAVFYLANGAYFLGVVQIVV 73
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L +++CA
Sbjct: 74 YTGAIMMLFLFVVMLVGVTAADSLKETLKGQRWLAALCGLGFGILLCAGLGNASLTTWNG 133
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
G NVE + +++T+Y + EI+G +L+ + +GA+VL R R + R ++
Sbjct: 134 LGQANAGGNVEGLAALIFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RARTQREQA 191
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ V G+
Sbjct: 192 EARVRTGRNVPPLPAPGV 209
>gi|326316108|ref|YP_004233780.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323372944|gb|ADX45213.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 222
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 79/205 (38%), Positives = 123/205 (60%), Gaps = 8/205 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FFYLFS + + ++F V+T RNP+++V LI AF AA ++LLL AEF+A+ ++
Sbjct: 1 MDAKTGFFYLFSVVLLYAAFRVITARNPVHAVLHLILAFSQAAAIWLLLKAEFLAIALVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+GAV+V FLF++MMLDI I+ R F + FIG L A + +
Sbjct: 61 VYLGAVMVLFLFVVMMLDIHIDTVRQGFWRHFPLAAFIGALIALEMAAVLMGGFRGMDEP 120
Query: 121 L--------SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ V + +N + +GK+LYT+Y YP+EI+ ILL++MI AI L LR R+D K
Sbjct: 121 KAVAAMVDAAGNVVQYSNTKALGKLLYTEYLYPVEIAAVILLVAMIAAIALTLRQRKDTK 180
Query: 173 RQDISKQLESNPDNSIVMVKVKSGK 197
+S+Q+ + + +VKV + +
Sbjct: 181 VTKVSEQVRVRAADRVALVKVAATQ 205
>gi|134103321|ref|YP_001108982.1| NADH dehydrogenase subunit J [Saccharopolyspora erythraea NRRL
2338]
gi|133915944|emb|CAM06057.1| NADH dehydrogenase I chain J [Saccharopolyspora erythraea NRRL
2338]
Length = 329
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 93/201 (46%), Gaps = 5/201 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F+ +A++ + +V RN ++S L+ + L++ A F+ ++V
Sbjct: 26 TGEAVVFWTLGPLALLGAMGMVFARNAVHSALWLVLTMLCLGVLYMAQSAPFLGFTQIIV 85
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFF---IGILAAELIVCASNFMVFSAE 118
Y GA+++ FLF++MM+ D + RG + +G + A +
Sbjct: 86 YTGAIMMLFLFVLMMVGRDSSDSVVEVLRGQRLAAALAGVGFAVLLVTGLARSLTDVPVA 145
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
L+ +G +G++++T Y +P E++ +L+ + +GA+VL + KR +S+
Sbjct: 146 APLNPWSPQGGGAGGLGRLIFTDYLFPFELTSALLITAALGAMVLAYGGKGRAKR--LSQ 203
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
+ ++ V G G+
Sbjct: 204 RDMADARFRSARVSPLPGPGV 224
>gi|134095022|ref|YP_001100097.1| NADH dehydrogenase I subunit J [Herminiimonas arsenicoxydans]
gi|133738925|emb|CAL61972.1| NADH-quinone oxidoreductase subunit J (NADH dehydrogenase I subunit
J) (NDH-1 subunit J) [Herminiimonas arsenicoxydans]
Length = 213
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 58/196 (29%), Positives = 109/196 (55%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+FS + + ++ V+T NP+++ L+ +F AA L++LL AEF++++ ++
Sbjct: 1 MEFTTVLFYVFSAILVFAAIRVITDSNPVHAALFLVLSFCTAAALWMLLKAEFLSIVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MM+DI + + IG++ + + A
Sbjct: 61 VYVGAVMVLFLFVVMMVDIKLSNVREGFWGYLPLAATIGVVIVLEMAAVLFRGFWKAHTH 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ N + +GK++YTQY Y E++ +LLL+M+ A+ L +R R+D K +
Sbjct: 121 VPEAAAMIGNTKELGKLIYTQYLYAFELAALLLLLAMVAAVALTMRKRKDTKYFAPGDAV 180
Query: 181 ESNPDNSIVMVKVKSG 196
+ + + +VK+K+
Sbjct: 181 KVKSGDRLRVVKMKAE 196
>gi|293603928|ref|ZP_06686343.1| NADH-quinone oxidoreductase subunit J [Achromobacter piechaudii
ATCC 43553]
gi|292817765|gb|EFF76831.1| NADH-quinone oxidoreductase subunit J [Achromobacter piechaudii
ATCC 43553]
Length = 218
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 68/195 (34%), Positives = 112/195 (57%), Gaps = 1/195 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + +I++F V+T R+P+ +V LI AF NAA L++LLGAEF+A++ ++
Sbjct: 1 MTFTTVLFYILAAVLVIAAFRVITARSPVTAVLHLILAFSNAAMLWMLLGAEFLALLLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI ++ K IG++ + + G
Sbjct: 61 VYVGAVMVLFLFVVMMLDIRMDAMRQGLKTYLPLGLVIGLVLVLEMSFVLG-STWYGAGP 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + NN +G+ +YTQY Y +E+ +LL+ M+ A+ L LR RRD+K D +
Sbjct: 120 QAPVAGDYNNARALGEAMYTQYIYAVEVGAALLLVGMVAAVALTLRRRRDVKYNDPVAAV 179
Query: 181 ESNPDNSIVMVKVKS 195
+ MVK+ +
Sbjct: 180 RVRSKDRFRMVKMPA 194
>gi|294630805|ref|ZP_06709365.1| NADH dehydrogenase I, J subunit [Streptomyces sp. e14]
gi|292834138|gb|EFF92487.1| NADH dehydrogenase I, J subunit [Streptomyces sp. e14]
Length = 280
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ F++ +A+I + V +R ++S SL + A +L GA F+ ++ +VV
Sbjct: 12 TGEAFQFWVLGTVAVIGALCTVFMRKAVHSALSLAGTMIILAVFYLANGAYFLGIVQIVV 71
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L +++ A +
Sbjct: 72 YTGAIMMLFLFVVMLVGVTAADSLKETIKGQRWLALLCGLGFGILLVAGIANASLKDFAG 131
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ NVE + +++T+Y Y E++G +L+ + IGA+VL R R + R ++L
Sbjct: 132 AGKANANGNVEGLASLIFTRYVYAFELTGALLITATIGAMVLTHRERTE--RAKTQRELA 189
Query: 182 SNPDNSIVMVKVKSGKGI 199
V G+
Sbjct: 190 EQRVREGKHVPPLPAPGV 207
>gi|54295609|ref|YP_128024.1| NADH-quinone oxidoreductase chain J [Legionella pneumophila str.
Lens]
gi|53755441|emb|CAH16937.1| NADH-quinone oxidoreductase chain J [Legionella pneumophila str.
Lens]
Length = 219
Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 20/211 (9%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ + ++S+ +V++ NP+ V L+ F +A L++L AEF+A+I ++VYVGAV
Sbjct: 9 IFYVFALLTVLSAVMVISQNNPVRCVLFLVLTFFTSAVLWILAEAEFLALILILVYVGAV 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF++MML+IDIE + + I L L++ A +F +
Sbjct: 69 MTLFLFVVMMLNIDIESMKSHLIKYLPFGLIIVALFTGLLMVAIPKDLFKNSVQTQEKPL 128
Query: 127 KGN--------------------NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
N N E +G VLYT Y EI+ ILL++++ AI L+ R
Sbjct: 129 SVNSQLMDLSTEDGLVTPENATSNTEKLGMVLYTDYILAFEIAAVILLVAIVSAITLVHR 188
Query: 167 HRRDIKRQDISKQLESNPDNSIVMVKVKSGK 197
KRQDI++Q+ + + ++ +KS K
Sbjct: 189 GAIRSKRQDITQQIMTRRAERVKLISMKSEK 219
>gi|297159517|gb|ADI09229.1| NADH dehydrogenase subunit J [Streptomyces bingchenggensis BCW-1]
Length = 312
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ + +A+I + + +R ++S L + A +L GA F+ ++ +VV
Sbjct: 11 TGEAVQFWILATVAVIGALGTILMRKAVHSALCLAGTMIVLAVFYLANGAYFLGVVQIVV 70
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L +++CA
Sbjct: 71 YTGAIMMLFLFVVMLVGVTAADSLKETLKGQRWLAALCGLGFGILLCAGIGNASLKSFNG 130
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
G NVE + +++T+Y + EI+G +L+ + +GA+VL R R + R ++
Sbjct: 131 LGQANSGGNVEGLATLIFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RALSQREQA 188
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ V G+
Sbjct: 189 ERRVRTGTQVPPLPAPGV 206
>gi|71275681|ref|ZP_00651966.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Xylella
fastidiosa Dixon]
gi|71897775|ref|ZP_00680001.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Xylella
fastidiosa Ann-1]
gi|170729498|ref|YP_001774931.1| NADH dehydrogenase subunit J [Xylella fastidiosa M12]
gi|182680814|ref|YP_001828974.1| NADH dehydrogenase subunit J [Xylella fastidiosa M23]
gi|71163572|gb|EAO13289.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Xylella
fastidiosa Dixon]
gi|71732330|gb|EAO34384.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Xylella
fastidiosa Ann-1]
gi|167964291|gb|ACA11301.1| NADH-ubiquinone oxidoreductase NQO10 subunit [Xylella fastidiosa
M12]
gi|182630924|gb|ACB91700.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Xylella
fastidiosa M23]
Length = 221
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FYLFS + + ++ V++VR+P+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVNIAFYLFSAVVVAAAGAVISVRHPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG- 119
VYVGAV+V FLF++MMLDID R + + +V + A
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDTSRLREGWVRYLPVGLLVAGVMLVQMVVLIGVKMRMATPF 120
Query: 120 ---ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + L+T + +P E + IL +++I A++L LR R +K QD
Sbjct: 121 PVDNAAAQAADTSNLIWLAHSLFTDFLFPFEFAAVILTVAVIAAVMLTLRKREGVKTQDP 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
S+Q + + +V + + K I
Sbjct: 181 SQQTRVKSADRLRIVSMPTEKPI 203
>gi|148361093|ref|YP_001252300.1| NADH dehydrogenase I subunit J [Legionella pneumophila str. Corby]
gi|148282866|gb|ABQ56954.1| NADH dehydrogenase I, J subunit [Legionella pneumophila str. Corby]
Length = 219
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 20/211 (9%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ + ++S+ +V++ NP+ V L+ F +A L++L AEF+A+I ++VYVGAV
Sbjct: 9 IFYIFALLTVLSALMVISQNNPVRCVLFLVLTFFTSAVLWVLAEAEFLALILILVYVGAV 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS---- 122
+ FLF++MML+IDIE + + I L L++ A +F ++
Sbjct: 69 MTLFLFVVMMLNIDIESMKSHLIKYLPFGLIIVALLTGLLMVAIPKDIFKNSVQIQEKPL 128
Query: 123 ----------------RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+N E +G VLYT Y EI+ ILL++++ AI L+ R
Sbjct: 129 SVSSQLMDLSTQDELVPPENATSNTEKLGMVLYTDYILAFEIAAVILLVAIVSAITLVHR 188
Query: 167 HRRDIKRQDISKQLESNPDNSIVMVKVKSGK 197
KRQDI++Q+ + + ++ +KS K
Sbjct: 189 GAIRSKRQDITQQIMTRRAERVKLISMKSEK 219
>gi|86739260|ref|YP_479660.1| NADH dehydrogenase subunit J [Frankia sp. CcI3]
gi|86566122|gb|ABD09931.1| NADH dehydrogenase subunit J [Frankia sp. CcI3]
Length = 267
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 94/199 (47%), Gaps = 3/199 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ F++ S +A++++ +V VR+ ++S L+ A +L+ A F+ + ++V
Sbjct: 17 TGEAATFWILSPVAVLAALGMVMVRSAVHSALLLVANLFCVAVFYLIQEAPFLGFVQIIV 76
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL-GSFFIGILAAELIVCASNFMVFSAEGE 120
Y GA++V FLF++M++ +D + RG G+ G+ A L+ + +
Sbjct: 77 YAGAIMVLFLFVLMLVGVDSSDSLVETIRGQRLGAIVFGLGFAGLLAFPIGSAIDGGSAK 136
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
G NV+ IG++L+T Y + E +L+++ IG +VL R R R + +
Sbjct: 137 GLSEANTGGNVQAIGRLLFTDYVFVFEAISALLVVAAIGTMVLGHREREGG-RISQREWM 195
Query: 181 ESNPDNSIVMVKVKSGKGI 199
V G G+
Sbjct: 196 RRRFTEG-RQVTPLPGPGV 213
>gi|54298763|ref|YP_125132.1| NADH-quinone oxidoreductase chain J [Legionella pneumophila str.
Paris]
gi|296108423|ref|YP_003620124.1| NADH dehydrogenase I chain J [Legionella pneumophila 2300/99 Alcoy]
gi|53752548|emb|CAH13980.1| NADH-quinone oxidoreductase chain J [Legionella pneumophila str.
Paris]
gi|295650325|gb|ADG26172.1| NADH dehydrogenase I chain J [Legionella pneumophila 2300/99 Alcoy]
Length = 219
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 20/211 (9%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ + ++S+ +V++ NP+ V L+ F +A L++L AEF+A+I ++VYVGAV
Sbjct: 9 IFYIFALLTVLSALMVISQNNPVRCVLFLVLTFFTSAVLWVLAEAEFLALILILVYVGAV 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS---- 122
+ FLF++MML+IDIE + + I L L++ A +F ++
Sbjct: 69 MTLFLFVVMMLNIDIESMKSHLIKYLPFGLIIVALLTGLLMVAIPKDLFKNSVQIQEKPL 128
Query: 123 ----------------RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+N E +G VLYT Y EI+ ILL++++ AI L+ R
Sbjct: 129 SVSSQLMDLSTQDELVPPENATSNTEKLGMVLYTDYILAFEIAAVILLVAIVSAITLVHR 188
Query: 167 HRRDIKRQDISKQLESNPDNSIVMVKVKSGK 197
KRQDI++Q+ + + ++ +KS K
Sbjct: 189 GAIRSKRQDITQQIMTRRAERVKLISMKSEK 219
>gi|165933782|ref|YP_001650571.1| NADH:ubiquinone oxidoreductase subunit J [Rickettsia rickettsii
str. Iowa]
gi|165908869|gb|ABY73165.1| NADH-quinone oxidoreductase chain J [Rickettsia rickettsii str.
Iowa]
Length = 205
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 117/197 (59%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + ISS VV +N +YSV LIFAF+N AGL +LLGAEF+AM+ +V+YVGA
Sbjct: 3 IFFYLFATLITISSVCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V + FL +IMMLD+ + K S FI ++ +V + +
Sbjct: 63 VALLFLSVIMMLDMHFNKTITQLKANLALSIFIALIMFADLVIIILLGTKNINFNSNVSF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IG VLYT + P +++G IL ++MI I L L+ R +KRQDISKQL
Sbjct: 123 TITNNISNTKAIGSVLYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKRQDISKQLRH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N +N+++M K KG+
Sbjct: 183 NKENTVLMTKPILNKGV 199
>gi|319408588|emb|CBI82243.1| NADH dehydrogenase I chain J [Bartonella schoenbuchensis R1]
Length = 190
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 80/190 (42%), Positives = 116/190 (61%), Gaps = 5/190 (2%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
++S+ VV RNP++SV LI AF NAA LF+LLGAEF+ +I LVVYVGAV V FLF++
Sbjct: 1 MLVSAVTVVAARNPVHSVLFLILAFFNAAALFVLLGAEFLGLILLVVYVGAVAVLFLFVV 60
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF-----SAEGELSRLVFKGN 129
MMLD+D + R FIG++ ++ F S + + +
Sbjct: 61 MMLDVDFAELKSGVLRYIPVGAFIGVVIVVELISVFISSHFSPVLRSYVTQPMPDLAQRT 120
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIV 189
N + +G +LYT Y + +I+G ILL++MIGAIVL LRH+ +KRQ I+ Q+ ++I
Sbjct: 121 NTQALGDILYTDYIFYFQIAGMILLVAMIGAIVLTLRHKSGVKRQSIAVQVARTAKSAIE 180
Query: 190 MVKVKSGKGI 199
+ +V+SGKGI
Sbjct: 181 IKQVESGKGI 190
>gi|307611650|emb|CBX01338.1| NADH-quinone oxidoreductase chain J [Legionella pneumophila 130b]
Length = 219
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 20/211 (9%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ + ++S+ +V++ NP+ V L+ F +A L++L AEF+A+I ++VYVGAV
Sbjct: 9 IFYVFALLTVLSAVMVISQNNPVRCVLFLVLTFFTSAVLWILAEAEFLALILILVYVGAV 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF++MML+IDIE + + I L L++ A +F +
Sbjct: 69 MTLFLFVVMMLNIDIESMKSHLIKYLPFGLIIVALLTGLLMVAIPKDLFKNSVQTQEKPL 128
Query: 127 KGN--------------------NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
N N E +G VLYT Y EI+ ILL++++ AI L+ R
Sbjct: 129 SVNSQLMDLSTEDGLVTPKNATSNTEKLGMVLYTDYILAFEIAAVILLVAIVSAITLVHR 188
Query: 167 HRRDIKRQDISKQLESNPDNSIVMVKVKSGK 197
KRQDI++Q+ + + ++ +KS K
Sbjct: 189 GAIRSKRQDITQQIMTRRAERVKLISMKSEK 219
>gi|157826242|ref|YP_001493962.1| NADH dehydrogenase subunit J [Rickettsia akari str. Hartford]
gi|157800200|gb|ABV75454.1| NADH dehydrogenase subunit J [Rickettsia akari str. Hartford]
Length = 205
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 113/197 (57%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + ISS VV +N IYSV LIF F+N AGL +LLGAEF+AMI +V+YVGA
Sbjct: 3 IFFYLFATLITISSLCVVLSKNSIYSVLCLIFTFINGAGLMILLGAEFLAMILIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V V FLF+IMMLD+ + K S FI ++ ++ +
Sbjct: 63 VAVLFLFVIMMLDMHFNKTITQLKENLALSIFIALIMFCDLIIIILLGTKNINFSSDISF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IG VLYT + P +++G IL ++MI I L L+ R +K QDI+KQL
Sbjct: 123 AITNNISNTKAIGNVLYTNFMLPFQMAGLILFVAMIACITLTLKKREGVKHQDITKQLSH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N N ++M K KG+
Sbjct: 183 NKGNVVLMTKPTLNKGV 199
>gi|52842978|ref|YP_096777.1| NADH dehydrogenase I, J subunit [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630089|gb|AAU28830.1| NADH dehydrogenase I, J subunit [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 219
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 66/211 (31%), Positives = 109/211 (51%), Gaps = 20/211 (9%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ + ++S+ +V++ NP+ V L+ F +A L++L AEF+A+I ++VYVGAV
Sbjct: 9 IFYVFALLTVLSAVMVISQNNPVRCVLFLVLTFFTSAVLWVLAEAEFLALILILVYVGAV 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF++MML+IDIE + + I L L++ A +F +
Sbjct: 69 MTLFLFVVMMLNIDIESMKSHLIKYLPFGLIIVALLTGLLMVAIPKDLFKNSVQTQEKPL 128
Query: 127 KGN--------------------NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
N N E +G VLYT Y EI+ ILL++++ AI L+ R
Sbjct: 129 SVNSQLMDLSTEDGLVTPEKATSNTEKLGMVLYTDYILAFEIAAVILLVAIVSAITLVHR 188
Query: 167 HRRDIKRQDISKQLESNPDNSIVMVKVKSGK 197
KRQDI++Q+ + + ++ +KS K
Sbjct: 189 GAIRSKRQDITQQIMTRRAERVKLISMKSEK 219
>gi|51473958|ref|YP_067715.1| NADH dehydrogenase subunit J [Rickettsia typhi str. Wilmington]
gi|81610752|sp|Q68VV9|NUOJ_RICTY RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|51460270|gb|AAU04233.1| NADH dehydrogenase (ubiquinone) subunit J [Rickettsia typhi str.
Wilmington]
Length = 205
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 85/197 (43%), Positives = 118/197 (59%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + IISS VV +N +YSV LIF F+NAAGL +LLGAEF+AM+ +V+YVGA
Sbjct: 3 IFFYLFTTLIIISSLCVVLSKNSVYSVLWLIFTFINAAGLMILLGAEFLAMLLIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILA---AELIVCASNFMVFSAEGELS 122
V V FLF+IMMLDI+ A + + S FI ++ + V S + +
Sbjct: 63 VAVLFLFVIMMLDINFNQAITKLRENLSLSIFITLIMFVDLVITVILSTKNINHSSNISF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IG VLYT + P +++G IL ++MI I L L+ R +K QDI KQL
Sbjct: 123 AIANNISNTKAIGSVLYTDFMLPFQMAGLILFVAMISCITLTLKKRERVKYQDIRKQLSH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N N I+M K KG+
Sbjct: 183 NKGNVILMTKPILNKGV 199
>gi|291498625|gb|ADE08099.1| nad6-1 [Triticum aestivum]
gi|291498626|gb|ADE08100.1| nad6-2 [Triticum aestivum]
Length = 305
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 11/183 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F AMI+ VV++GA+ V
Sbjct: 23 VLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLGLDFSAMISPVVHIGAIAVS 82
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL----- 124
FLF++MM +I I R S IG++ + +
Sbjct: 83 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLRY 142
Query: 125 ------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
V N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 143 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 202
Query: 179 QLE 181
+
Sbjct: 203 RNA 205
>gi|294340852|emb|CAZ89247.1| putative NADH-quinone oxidoreductase chain J (NADH dehydrogenase I,
chain J) (NDH-1, chain J) (NuoJ) [Thiomonas sp. 3As]
Length = 209
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 118/205 (57%), Gaps = 10/205 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q++ FYLFS + + ++ V+T RNP++S L+ AF + ++LLL AEF+A++ ++
Sbjct: 1 MDVQTILFYLFSAVLLFAALRVITARNPVHSALYLVLAFFQMSAIWLLLRAEFLAIVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA----------S 110
VYVGAV+V FLF++MMLDI+++ R F + +G+L + +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLDSIRKGFWRYFPVAALVGVLIVLEMAAVLMQGFQIGGMT 120
Query: 111 NFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
A + +N +G VLY+QY + +EI+ ILL+++I AI L LR R+D
Sbjct: 121 RAAQVGAAASADNPLTHLSNTRALGVVLYSQYLFAVEIAAVILLVAIIAAIALTLRRRKD 180
Query: 171 IKRQDISKQLESNPDNSIVMVKVKS 195
++ S+Q+++ + + +V + +
Sbjct: 181 VRHMPASEQIKARRADRVRLVSMPA 205
>gi|157829056|ref|YP_001495298.1| NADH dehydrogenase subunit J [Rickettsia rickettsii str. 'Sheila
Smith']
gi|157801537|gb|ABV76790.1| NADH dehydrogenase subunit J [Rickettsia rickettsii str. 'Sheila
Smith']
Length = 205
Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats.
Identities = 81/197 (41%), Positives = 117/197 (59%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + ISS VV +N +YSV LIFAF+N AGL +LLGAEF+AM+ +V+YVGA
Sbjct: 3 IFFYLFATLITISSVCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V + FL +IMMLD+ + K S FI ++ +V + +
Sbjct: 63 VALLFLSVIMMLDMHFNKTITQLKANLALSIFIALIMFADLVIIILLGTKNINFNSNVSF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IG VLYT + P +++G IL ++MI I L L+ R +KRQDISKQL
Sbjct: 123 TITNNISNTKAIGGVLYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKRQDISKQLRH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N +N+++M K KG+
Sbjct: 183 NKENTVLMTKPILNKGV 199
>gi|300113274|ref|YP_003759849.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Nitrosococcus watsonii C-113]
gi|299539211|gb|ADJ27528.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosococcus
watsonii C-113]
Length = 201
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 115/197 (58%), Gaps = 3/197 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ FY+F+ + + ++ +VVTVRNP+ + L+ AF +A ++LLL AEF+A++ ++VY
Sbjct: 1 MEKTLFYIFAAILLFAATMVVTVRNPVRAALFLVLAFFTSAAIWLLLEAEFLAIVLVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+GAV+V FLF++MMLD+++ + R + +L A ++ F +
Sbjct: 61 IGAVMVLFLFVVMMLDMNLAPLQEGFARYLPVGLLVAVLIAIEMIMVLGSKNFGLDQFTV 120
Query: 123 RLV--FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ NN + +G +LYT Y YP E++ ILL++++ AI L LR R K QD +Q+
Sbjct: 121 PVARGADYNNTKELGNLLYTVYVYPFELASVILLVAIVAAIALALRRRP-SKTQDPVQQV 179
Query: 181 ESNPDNSIVMVKVKSGK 197
P + + +VK+ + K
Sbjct: 180 RVRPQDRVRLVKMTAEK 196
>gi|311104667|ref|YP_003977520.1| NADH-quinone oxidoreductase subunit J [Achromobacter xylosoxidans
A8]
gi|310759356|gb|ADP14805.1| NADH-quinone oxidoreductase subunit J [Achromobacter xylosoxidans
A8]
Length = 216
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 111/195 (56%), Gaps = 1/195 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + +I++F V+T R+P+ +V LI AF NAA L++LLGAEF+A++ ++
Sbjct: 1 MTFTTVLFYILAAVLVIAAFRVITARSPVTAVLHLILAFSNAAMLWMLLGAEFLALLLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI ++ K IG++ + + G
Sbjct: 61 VYVGAVMVLFLFVVMMLDIRMDALRQGMKTYLPLGLIIGLVMVLEMAFVLG-STWYGAGP 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + NN +G+ +YTQY Y +E+ +LL+ M+ AI L LR RRD+K D +
Sbjct: 120 QAPVAGDYNNARALGEAMYTQYVYAIEVGAALLLVGMVAAIALTLRRRRDVKYNDPVAAV 179
Query: 181 ESNPDNSIVMVKVKS 195
+ +V + +
Sbjct: 180 RVRAKDRFRLVSMPA 194
>gi|332526756|ref|ZP_08402858.1| NADH-ubiquinone oxidoreductase, subunit J [Rubrivivax
benzoatilyticus JA2]
gi|332111159|gb|EGJ11191.1| NADH-ubiquinone oxidoreductase, subunit J [Rubrivivax
benzoatilyticus JA2]
Length = 210
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 118/198 (59%), Gaps = 1/198 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FYLFS + + ++ V+T R+ ++ V L+ AF NAA +++LL AEF+A++ ++
Sbjct: 1 MNTTTALFYLFSAVLLFAALRVITARSTVHGVLYLVLAFFNAACIWMLLQAEFLAIVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAEG 119
VYVGAV+V FLF++MMLDI+ E + F + +G ++A E+ + +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINSESVRTGFWKHFPLAGMVGAVIALEMSLVLLRGFQPAQAP 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
EL+ + N +G LYT Y YPL+++ +LL++++ AI L LRHR+D +R D +
Sbjct: 121 ELTAQALEMGNTRLLGIELYTHYLYPLQLAAVLLLVAIVAAIALTLRHRKDSRRVDPAMA 180
Query: 180 LESNPDNSIVMVKVKSGK 197
+ + + +VKV + K
Sbjct: 181 VRVKRADRVRLVKVPTVK 198
>gi|28198180|ref|NP_778494.1| NADH dehydrogenase subunit J [Xylella fastidiosa Temecula1]
gi|28056250|gb|AAO28143.1| NADH-ubiquinone oxidoreductase NQO10 subunit [Xylella fastidiosa
Temecula1]
Length = 222
Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FYLFS + + ++ V++VR+P+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 2 MDWVNIAFYLFSAVVVAAAGAVISVRHPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 61
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG- 119
VYVGAV+V FLF++MMLDID R + + +V + A
Sbjct: 62 VYVGAVMVLFLFVVMMLDIDTSRLREGWVRYLPVGLLVAGVMLVQMVVLIGVKMRMATPF 121
Query: 120 ---ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + L+T + +P E + IL +++I A++L LR R +K QD
Sbjct: 122 PVDNAAAQAADTSNLIWLAHSLFTDFLFPFEFAAVILTVAVIAAVMLTLRKREGVKTQDP 181
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
S+Q + + +V + + K I
Sbjct: 182 SQQTRVKSADRLRIVSMPTEKPI 204
>gi|15604622|ref|NP_221140.1| NADH dehydrogenase subunit J [Rickettsia prowazekii str. Madrid E]
gi|20139313|sp|Q9ZCG3|NUOJ_RICPR RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|3861317|emb|CAA15216.1| NADH DEHYDROGENASE I CHAIN J (nuoJ) [Rickettsia prowazekii]
gi|292572439|gb|ADE30354.1| NADH dehydrogenase I chain J [Rickettsia prowazekii Rp22]
Length = 205
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 84/197 (42%), Positives = 117/197 (59%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + IISS VV +N +YSV LIF F+N +GL +LLGAEF+AM+ +V+YVGA
Sbjct: 3 IFFYLFTTLIIISSLCVVLSKNSVYSVLWLIFTFINGSGLMILLGAEFLAMLLIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V V FLF+IMMLDI+ A + + S FI ++ +V + +
Sbjct: 63 VAVLFLFVIMMLDINFNQAITKLRENLSLSIFITLIMFADLVITIILSTKNINYSSNISF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IG VLYT++ P +I+G IL ++MI I L L+ R IK QDI KQL
Sbjct: 123 AIANNISNTKAIGNVLYTEFMLPFQIAGLILFVAMISCITLTLKKRDRIKHQDIRKQLSH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N N I+M K KG+
Sbjct: 183 NKSNVILMTKPILNKGV 199
>gi|302864910|ref|YP_003833547.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Micromonospora aurantiaca ATCC 27029]
gi|315501195|ref|YP_004080082.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Micromonospora sp. L5]
gi|302567769|gb|ADL43971.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Micromonospora aurantiaca ATCC 27029]
gi|315407814|gb|ADU05931.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Micromonospora sp. L5]
Length = 256
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 94/197 (47%), Gaps = 2/197 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F++ + +A++ + +V RN ++S L+ + ++L F+ M+ ++VY
Sbjct: 17 EEVTFWILAPLALLGAIGMVWARNAVHSALWLVLTMLCLGVFYVLQAGPFIGMVQIIVYT 76
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-GILAAELIVCASNFMVFSAEGELS 122
GA+++ FLF++M++ D + RG + + G+ A L+ + +
Sbjct: 77 GAIMMLFLFVLMLVGRDASDSLIETLRGQRVAAVVLGLGFAGLVGTGLYRALDGVQPVGL 136
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
NV+ I ++L+T+Y + E++ +L+ + +GA+VL RR R D +++
Sbjct: 137 DEANGEGNVQGIARLLFTKYVFAFELTSALLITAAVGAMVLAHVERRKADRMDQIATMKA 196
Query: 183 NPDNSIVMVKVKSGKGI 199
K G G+
Sbjct: 197 RFRPG-NYPGPKPGPGV 212
>gi|163850508|ref|YP_001638551.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium extorquens PA1]
gi|218529205|ref|YP_002420021.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium chloromethanicum CM4]
gi|240137573|ref|YP_002962044.1| NADH-quinone oxidoreductase chain J (NADH dehydrogenase I, chain J)
[Methylobacterium extorquens AM1]
gi|254560044|ref|YP_003067139.1| NADH-quinone oxidoreductase subunit J [Methylobacterium extorquens
DM4]
gi|163662113|gb|ABY29480.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium extorquens PA1]
gi|218521508|gb|ACK82093.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium chloromethanicum CM4]
gi|240007541|gb|ACS38767.1| NADH-quinone oxidoreductase chain J (NADH dehydrogenase I, chain J)
[Methylobacterium extorquens AM1]
gi|254267322|emb|CAX23154.1| NADH-quinone oxidoreductase chain J (NADH dehydrogenase I, chain J)
[Methylobacterium extorquens DM4]
Length = 206
Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats.
Identities = 88/204 (43%), Positives = 119/204 (58%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FFYLF+ A+ S F+V+ RNP+ SV LI AFVNAAGLF+L+GAEF+AMI +V
Sbjct: 1 MTAAAAFFYLFAGFAVASGFMVIAARNPVTSVLFLILAFVNAAGLFVLMGAEFLAMILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D +R IG + +V
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAALRQGFQRYLPIGGLIGAIFLIELVLVVGTWTIDPGLV 120
Query: 121 LSRL-----VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ L N E +G+VLYT Y Y +I+G ILL++MIGAIVL LR R +KRQ+
Sbjct: 121 QAPLGRAAHGETATNTEALGRVLYTDYVYAFQIAGLILLVAMIGAIVLTLRERTGVKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I+ Q ++ +KV S +G+
Sbjct: 181 IAVQNARTQGMAVDTIKVPSRQGV 204
>gi|307579281|gb|ADN63250.1| NADH dehydrogenase subunit J [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 229
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FYLFS + + ++ V++VR+P+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 9 MDWVNIAFYLFSAVVVAAAGAVISVRHPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 68
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG- 119
VYVGAV+V FLF++MMLDID R + + +V + A
Sbjct: 69 VYVGAVMVLFLFVVMMLDIDTSRLREGWVRYLPVGLLVAGVMLVQMVVLIGVKMRMATPF 128
Query: 120 ---ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + L+T + +P E + IL +++I A++L LR R +K QD
Sbjct: 129 PVDNAAAQAADTSNLIWLAHSLFTDFLFPFEFAAVILTVAVIAAVMLTLRKREGVKTQDP 188
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
S+Q + + +V + + K I
Sbjct: 189 SQQTRVKSADRLRIVSMPTEKPI 211
>gi|326387452|ref|ZP_08209061.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208108|gb|EGD58916.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Novosphingobium nitrogenifigens DSM 19370]
Length = 205
Score = 124 bits (312), Expect = 6e-27, Method: Composition-based stats.
Identities = 79/203 (38%), Positives = 123/203 (60%), Gaps = 5/203 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q+ FYLF+ + I+S + + RNP++SV LI AF NAAGL +L GAEF+AM+ ++V
Sbjct: 1 MIQAFAFYLFATLMIVSGAVTILARNPVHSVLWLILAFFNAAGLMVLAGAEFIAMLLIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGI-----LAAELIVCASNFMVFS 116
YVGAV V FLF++MMLDID R + + L ++V ++ M
Sbjct: 61 YVGAVAVLFLFVVMMLDIDFAELRAGFIRNAPLGVILAVVLFVELFVGILVRSAGDMAIG 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
G + + +N IG +LYT+Y + E +GFILL++MIGAIVL R R ++ Q+I
Sbjct: 121 TAGAATAVPAGLSNTAAIGALLYTRYLFVFEAAGFILLVAMIGAIVLTHRQRSGVRGQNI 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+KQ+ P+ + + ++ + GKG+
Sbjct: 181 AKQIARRPEEATINLQPEVGKGV 203
>gi|67459647|ref|YP_247271.1| NADH dehydrogenase subunit J [Rickettsia felis URRWXCal2]
gi|75535957|sp|Q4UK29|NUOJ_RICFE RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|67005180|gb|AAY62106.1| NADH dehydrogenase I chain J [Rickettsia felis URRWXCal2]
Length = 205
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 82/197 (41%), Positives = 115/197 (58%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + ISS VV +N +YSV LIFAF+N AGL +LLGAEF+AM+ +V+YVGA
Sbjct: 3 IFFYLFATLITISSLCVVLSKNSVYSVLWLIFAFINGAGLMILLGAEFLAMMLIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V V FLF+IMMLD+ + K S FI ++ +V +
Sbjct: 63 VAVLFLFVIMMLDMHFNKTITQLKENLALSSFIALIMFADLVTIILLGTKNINFISDVSF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N + IGKVLYT + P +++G IL ++MI I L L+ R +K QDI+KQL
Sbjct: 123 TITNDISNTKAIGKVLYTDFMLPFQMAGLILFVAMIACITLTLKKREGVKHQDITKQLSH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N N ++M K KG+
Sbjct: 183 NKSNVVLMTKPTLNKGV 199
>gi|160872240|ref|ZP_02062372.1| NADH-quinone oxidoreductase, j subunit [Rickettsiella grylli]
gi|159121039|gb|EDP46377.1| NADH-quinone oxidoreductase, j subunit [Rickettsiella grylli]
Length = 198
Score = 124 bits (311), Expect = 7e-27, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 106/196 (54%), Gaps = 2/196 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+QS F++F+ + I S+ + + RN + S L+ F +AA L++LL AEF+ +I ++V
Sbjct: 3 SIQSCVFFIFAGVLITSALMTIISRNSVRSALFLVLTFFSAAALWILLEAEFLGLILILV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV+ FLF+IM L++D + + + + + L + + L
Sbjct: 63 YVGAVMTLFLFVIMTLNLDKTEKQYGFVPYLV--WAVLGVLILLALLIDAVFPLTGNKIL 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
L +N + +G VLYTQYAYP EI+G +LL+ +I I L R +R K QL+
Sbjct: 121 IPLAANESNTQALGNVLYTQYAYPFEITGVLLLVGIIATIALSFREKRLNKAISPELQLK 180
Query: 182 SNPDNSIVMVKVKSGK 197
P + + ++K+ + K
Sbjct: 181 IKPSDRLRIIKMPTEK 196
>gi|188991038|ref|YP_001903048.1| NADH dehydrogenase subunit J [Xanthomonas campestris pv. campestris
str. B100]
gi|167732798|emb|CAP50992.1| NADH-ubiquinone oxidoreductase NQO10 subunit [Xanthomonas
campestris pv. campestris]
Length = 219
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVTIAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPVGVIVAVAMLAQMVTLIGVKGRLATPF 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 121 PVDNAAAQAADTSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKMQNA 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
S+Q + + MVK+ K +
Sbjct: 181 SEQSRVRSTDRLRMVKMAVEKPV 203
>gi|317401997|gb|EFV82597.1| NADH-ubiquinone oxidoreductase [Achromobacter xylosoxidans C54]
Length = 216
Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 110/195 (56%), Gaps = 1/195 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ + + +I++F V+T R+P+ +V LI AF NAA L++LLGAEF+A++ ++
Sbjct: 1 MTFTTVLFYILAAVLVIAAFRVITARSPVTAVLHLILAFANAAMLWMLLGAEFLALLLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI ++ K IG++ + + G
Sbjct: 61 VYVGAVMVLFLFVVMMLDIRMDALRQGMKTYLPLGLVIGLVMVLEMAFVLG-STWYGAGP 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + NN +G+ +YT Y Y +E+ +LL+ M+ AI L LR RRD+K D +
Sbjct: 120 QAPVAGDYNNARALGEAMYTHYIYAIEVGAALLLVGMVAAIALTLRRRRDVKYNDPVAAV 179
Query: 181 ESNPDNSIVMVKVKS 195
+ MV + +
Sbjct: 180 RVRSKDRFRMVSMPA 194
>gi|302553435|ref|ZP_07305777.1| NADH dehydrogenase subunit J [Streptomyces viridochromogenes DSM
40736]
gi|302471053|gb|EFL34146.1| NADH dehydrogenase subunit J [Streptomyces viridochromogenes DSM
40736]
Length = 280
Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + + ++ ++S L + A +L GA F+ ++ ++V
Sbjct: 12 TGEAVQFWILGTVAVIGALGTILMKRAVHSALCLAGTMIILAVFYLANGAYFLGVVQIIV 71
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L +++ A E
Sbjct: 72 YTGAIMMLFLFVVMLVGVTAADSLKETIKGQRWLALLCGLGFGILLFAGIGNASLKEFNG 131
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
G NV+ I +L+T+Y + EI+G +L+ + +GA+VL R R + R ++L
Sbjct: 132 IGQANAGGNVQGIAALLFTRYVFAFEITGALLITAAVGAMVLTHRERTE--RAKTQRELA 189
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 190 EERVREGKYMPPLPAPGV 207
>gi|220924014|ref|YP_002499316.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium nodulans ORS 2060]
gi|219948621|gb|ACL59013.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium nodulans ORS 2060]
Length = 206
Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 116/204 (56%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FFYLF+ + + S F+V+ RNP+ SV LI AFVNAAGLF+L+GAEF+AMI +V
Sbjct: 1 MTAAAAFFYLFAAITVASGFMVIASRNPVTSVLFLILAFVNAAGLFVLMGAEFLAMILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + IG + ++
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELRQGFQDYLPVGALIGAVFLVELLLVVGSWAIDPGLV 120
Query: 121 LSRLVFKGN-----NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ L N + +G VLYT Y + +I+G +LL++MIGAIVL LR R +KRQD
Sbjct: 121 QAPLAVAPGGDRITNTQALGLVLYTNYFFFFQIAGLVLLVAMIGAIVLTLRERPGVKRQD 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
++ Q ++ + V + +G+
Sbjct: 181 VTVQNARTQAMAVELRNVPTRQGV 204
>gi|114777370|ref|ZP_01452367.1| NADH dehydrogenase I chain J [Mariprofundus ferrooxydans PV-1]
gi|114552152|gb|EAU54654.1| NADH dehydrogenase I chain J [Mariprofundus ferrooxydans PV-1]
Length = 194
Score = 123 bits (310), Expect = 9e-27, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 113/194 (58%), Gaps = 2/194 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++++FF LF+ ++++S VV RN ++SV LIF F NAAGLF LL AEF+ +I +++
Sbjct: 1 MLETVFFNLFAGLSVLSGMGVVLARNTMHSVMFLIFCFFNAAGLFFLLDAEFIGIIMILI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL--GSFFIGILAAELIVCASNFMVFSAEG 119
YVGAV+V F F++MML+I+ + G I +L + S A
Sbjct: 61 YVGAVMVLFTFVVMMLEINTARMREGFLQYLPLGGLVAIVLLVEFISAAVSGVFSSGAMA 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
L NN IG+VLYT+Y EI+ ILL+++IGAIVL LR R+D K Q I+ Q
Sbjct: 121 TADHLPQSVNNTVEIGQVLYTKYLLGFEIAALILLVALIGAIVLTLRTRKDAKYQKIAAQ 180
Query: 180 LESNPDNSIVMVKV 193
+ ++ + V++
Sbjct: 181 VGVRKEDRMRKVRM 194
>gi|239929605|ref|ZP_04686558.1| NADH dehydrogenase subunit J [Streptomyces ghanaensis ATCC 14672]
gi|291437929|ref|ZP_06577319.1| NADH dehydrogenase subunit J [Streptomyces ghanaensis ATCC 14672]
gi|291340824|gb|EFE67780.1| NADH dehydrogenase subunit J [Streptomyces ghanaensis ATCC 14672]
Length = 283
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + V +R ++S L + A +L GA F+ ++ +VV
Sbjct: 12 TGEAVQFWVLGTIAVIGALCTVFMRRAVHSALCLAGTMIVLAVFYLANGAYFLGIVQIVV 71
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L ++ E
Sbjct: 72 YTGAIMMLFLFVVMLVGVTAADSLKETIKGQRWLALLCGLGFGTLLITGIGHASLGEFNG 131
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NVE I +++T+Y + EI+G +L+ + +GA+VL R R + R ++L
Sbjct: 132 IGQANANGNVEGIASLIFTRYVFAFEITGILLITAAVGAMVLTHRERTE--RARTQRELA 189
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 190 EQRVREGKYLPPLPAPGV 207
>gi|238023175|ref|ZP_04603601.1| hypothetical protein GCWU000324_03101 [Kingella oralis ATCC 51147]
gi|237865558|gb|EEP66698.1| hypothetical protein GCWU000324_03101 [Kingella oralis ATCC 51147]
Length = 217
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 61/199 (30%), Positives = 108/199 (54%), Gaps = 3/199 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY + + + S+ VT +NP+++ L+ F +A +LL+ AEF+ + +V
Sbjct: 1 MSFPLILFYTLAAIILFSALKTVTAKNPVHAALWLVLTFCMSAITWLLMQAEFLGITLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL--AAELIVCASNFMVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G+L A +++ + +A
Sbjct: 61 VYVGAVMVMFLFVVMMLNIDIEAMRQGFWRHAPAALTVGVLMAALLIMIFVAPDTNLAAF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + +NV ++G +YT Y P E++ +L+L M+ AI L+ R K D +
Sbjct: 121 GAMKDIPADYSNVRDLGTQIYTTYLLPFELASVLLVLGMVAAIALVHRKSTRTKYMDPAL 180
Query: 179 QLESNPDN-SIVMVKVKSG 196
Q+ NP+ + +V + +
Sbjct: 181 QVRVNPNEGRMRLVSMPAE 199
>gi|21231951|ref|NP_637868.1| NADH dehydrogenase subunit J [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66767922|ref|YP_242684.1| NADH dehydrogenase subunit J [Xanthomonas campestris pv. campestris
str. 8004]
gi|21113681|gb|AAM41792.1| NADH-ubiquinone oxidoreductase NQO10 subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66573254|gb|AAY48664.1| NADH-ubiquinone oxidoreductase NQO10 subunit [Xanthomonas
campestris pv. campestris str. 8004]
Length = 219
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 64/203 (31%), Positives = 108/203 (53%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVTIAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPVGVIVAVAMLAQMVTLIGVKARLATPF 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 121 PVDNAAAQATDTSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKMQNA 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
S+Q + + MVK+ K +
Sbjct: 181 SEQSRVRSTDRLRMVKMAVEKPV 203
>gi|157804159|ref|YP_001492708.1| NADH dehydrogenase subunit J [Rickettsia canadensis str. McKiel]
gi|157785422|gb|ABV73923.1| NADH dehydrogenase subunit J [Rickettsia canadensis str. McKiel]
Length = 205
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 85/197 (43%), Positives = 116/197 (58%), Gaps = 3/197 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+FFYLF+ + ISSF VV +N +YSV LIFAF+N + L +LLGAEF+AMI +V+YVGA
Sbjct: 3 IFFYLFATLITISSFCVVLNKNSVYSVLWLIFAFLNGSSLMILLGAEFLAMILIVIYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
V V FLF+IMMLD+ A + K S I ++ +V +
Sbjct: 63 VAVLFLFVIMMLDMHFNKAITQLKENLTLSILISLIMFADLVIIILLGTKNINFSSDILF 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+N + IG +LYT + P +++G IL ++MI IVL LR R IKRQDI KQL
Sbjct: 123 ATTNNISNTKAIGNILYTDFMIPFQMAGLILFVAMISCIVLTLRKREGIKRQDILKQLSH 182
Query: 183 NPDNSIVMVKVKSGKGI 199
N +N+++M K KGI
Sbjct: 183 NKENAVLMTKPLLNKGI 199
>gi|33592016|ref|NP_879660.1| NADH-ubiquinone oxidoreductase, chain J [Bordetella pertussis
Tohama I]
gi|33597902|ref|NP_885545.1| NADH-ubiquinone oxidoreductase, chain J [Bordetella parapertussis
12822]
gi|33602807|ref|NP_890367.1| NADH-ubiquinone oxidoreductase, chain J [Bordetella bronchiseptica
RB50]
gi|33571660|emb|CAE41153.1| NADH-ubiquinone oxidoreductase, chain J [Bordetella pertussis
Tohama I]
gi|33574331|emb|CAE38667.1| NADH-ubiquinone oxidoreductase, chain J [Bordetella parapertussis]
gi|33577249|emb|CAE35806.1| NADH-ubiquinone oxidoreductase, chain J [Bordetella bronchiseptica
RB50]
gi|332381432|gb|AEE66279.1| NADH-ubiquinone oxidoreductase, chain J [Bordetella pertussis CS]
Length = 215
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 112/193 (58%), Gaps = 1/193 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY+ +F+ +I++F V+T R+P+ +V LI AF NAA +++LLGAEF+A++ ++
Sbjct: 1 MTFTTVLFYILAFVLVIAAFRVITARSPVTAVLHLILAFANAAMIWMLLGAEFLALLLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI I+ K IG++ + + G
Sbjct: 61 VYVGAVMVLFLFVVMMLDIRIDSLRDGLKTYLPLGLVIGVVLVLEMAFVLG-STWYGAGP 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + NN +G+V+YTQY Y +E+ +LL+ M+ AI L LR RRD K D +
Sbjct: 120 QAPVAGDYNNARALGEVMYTQYVYAIEVGAALLLVGMVAAIALTLRRRRDAKYNDPVAAV 179
Query: 181 ESNPDNSIVMVKV 193
+ MVK+
Sbjct: 180 RVRAKDRFRMVKM 192
>gi|297201631|ref|ZP_06919028.1| NADH dehydrogenase subunit J [Streptomyces sviceus ATCC 29083]
gi|197710997|gb|EDY55031.1| NADH dehydrogenase subunit J [Streptomyces sviceus ATCC 29083]
Length = 285
Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ F++ +A+I + V +R ++S L + A +L GA F+ ++ +VV
Sbjct: 19 TGEAFQFWVLGTVAVIGALCTVFMRKAVHSALCLAGTMIILAVFYLANGAYFLGVVQIVV 78
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L +++ A +
Sbjct: 79 YTGAIMMLFLFVVMLVGVTAADSLTETIKGQRWLALLCGLGFGILLFAGIGNASLKQFNG 138
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
G NVE + +++T+Y + EI+G +L+ + +GA+VL R R + R +++
Sbjct: 139 LTQANAGGNVEGLATLIFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RALTQREMA 196
Query: 182 SNPDNSIVMVKVKSGKGI 199
V G+
Sbjct: 197 ERRVREGKHVPPLPAPGV 214
>gi|311897899|dbj|BAJ30307.1| putative NADH-quinone oxidoreductase subunit J [Kitasatospora setae
KM-6054]
Length = 283
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ + +A+ + ++ +R ++S L + A +L GA F+ ++ +VV
Sbjct: 4 TGEAVQFWVLAVIAVGGALGMLLMRKAVHSALCLAATMIALAVCYLAQGAVFLGVVQIVV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + + +G + + L +++ A +
Sbjct: 64 YTGAIMMLFLFVVMLVGVSAADSLKEQLKGQRVAAALCGLGFGVLLVAGLANAKLRDFTG 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NV+ + ++++T+Y + E++ +L+ + +GA+VL R + +K +QL
Sbjct: 124 LAGANAEGNVQGLARLIFTKYVWAFEVTSALLITAAVGAMVLTHREK--VKAPPTQRQLA 181
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ + V G+
Sbjct: 182 AQRVKDNIQVPPLPAPGV 199
>gi|294788066|ref|ZP_06753310.1| NADH dehydrogenase (ubiquinone), J subunit [Simonsiella muelleri
ATCC 29453]
gi|294484359|gb|EFG32042.1| NADH dehydrogenase (ubiquinone), J subunit [Simonsiella muelleri
ATCC 29453]
Length = 215
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 62/197 (31%), Positives = 110/197 (55%), Gaps = 3/197 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + FYLF+ + + + V +NP+++ L+ F +A ++LL+ AEF+ + +V
Sbjct: 1 MTFQLILFYLFAAIILYGALQTVLAKNPVHATLHLVLTFCVSAMMWLLMQAEFLGITLVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL--AAELIVCASNFMVFSAE 118
VYVGAV+V FLF++MML+IDIE R + +G+L A + + + +
Sbjct: 61 VYVGAVMVLFLFVVMMLNIDIEEMRKGFWRHAPAAMVVGVLMAVALIAILVAPDTALNQF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + +NV ++G LYT Y + E++ +L+L M+ AI L+ R + KR D +
Sbjct: 121 GLMKDIPADYSNVRDLGIQLYTTYMWQFELAAVLLVLGMVAAIALVHRKSTNPKRIDPAD 180
Query: 179 QLESNPDN-SIVMVKVK 194
Q++ N + +VK++
Sbjct: 181 QVKVNAAEGRMRLVKME 197
>gi|170742520|ref|YP_001771175.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium sp. 4-46]
gi|168196794|gb|ACA18741.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium sp. 4-46]
Length = 206
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 82/204 (40%), Positives = 117/204 (57%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FFYLF+ + + S +V+ RNP+ SV LI AFVNAAGLF+L+GAEF+AMI +V
Sbjct: 1 MTAAAAFFYLFAAITVASGLVVIAARNPVTSVLFLILAFVNAAGLFVLMGAEFLAMILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D + IG + ++
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELRQGFQDYLPVGALIGAVFLIELLLVVGSWAIDPGLV 120
Query: 121 LSRLVF-----KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ L + N + +G VLYT Y + +I+G ILL++MIGAIVL LR R +KRQD
Sbjct: 121 HAPLAVAPGGEQITNTQALGLVLYTNYFFFFQIAGLILLVAMIGAIVLTLRDRPGVKRQD 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I+ Q ++ + KV + +G+
Sbjct: 181 IAVQNARTQALAVELRKVPTRQGV 204
>gi|154248543|ref|YP_001419501.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Xanthobacter
autotrophicus Py2]
gi|154162628|gb|ABS69844.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Xanthobacter
autotrophicus Py2]
Length = 204
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 88/204 (43%), Positives = 129/204 (63%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FFYLF+F+ + S+F+V++ RNP+ SV LI AFVNAAGLF+L+GAEF+A+I +V
Sbjct: 1 MNVAAAFFYLFAFVLVASAFMVISSRNPVQSVLFLILAFVNAAGLFILIGAEFLALILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--- 117
VYVGAV V FLF++MMLD+D + IG++ +V + V
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFVELRQGFLQYLPVGLVIGLIFLAELVLVAGAWVMGPGVA 120
Query: 118 --EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
NV+ IG+VLYT Y Y + +GF+LL++MIGAIVL LRH+ ++KRQ+
Sbjct: 121 SAVKSAPPSAGDVGNVQAIGQVLYTDYIYFFQAAGFVLLVAMIGAIVLTLRHKVNVKRQN 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
IS Q+ ++ +VKV+ G+G+
Sbjct: 181 ISAQVARTAKTAMDVVKVRPGQGL 204
>gi|302559098|ref|ZP_07311440.1| NADH dehydrogenase I, J subunit [Streptomyces griseoflavus Tu4000]
gi|302476716|gb|EFL39809.1| NADH dehydrogenase I, J subunit [Streptomyces griseoflavus Tu4000]
Length = 280
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ F++ +A+I + V +R ++S L + A +L GA F+ ++ +VV
Sbjct: 12 TGEAFQFWVLGTVAVIGALCTVFMRRAVHSALCLAGTMIVLAVFYLANGAYFLGVVQIVV 71
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L +++ +E
Sbjct: 72 YTGAIMMLFLFVVMLVGVTAADSLKETIKGQRWLALLCGLGFGVLLVGGIGNASLSEFNG 131
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
G NVE + +L+T+Y + EI+G +L+ + +GA+VL R R + R ++L
Sbjct: 132 LGEANAGGNVEGLAALLFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RARTQRELA 189
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 190 EQRVREGKYLPPLPAPGV 207
>gi|170748468|ref|YP_001754728.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium radiotolerans JCM 2831]
gi|170654990|gb|ACB24045.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium radiotolerans JCM 2831]
Length = 206
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 118/204 (57%), Gaps = 5/204 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FFYLF+ + + S F+V+ RNP+ SV LI AFVNAAGLF+L+GAEF+AMI +V
Sbjct: 1 MTAAAAFFYLFASITVASGFMVIASRNPVASVLFLILAFVNAAGLFVLMGAEFLAMILVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV V FLF++MMLD+D ++ IG + ++
Sbjct: 61 VYVGAVAVLFLFVVMMLDVDFAELRQGFQQYLPIGALIGAIFLVELLLVVGSWSIDPGLV 120
Query: 121 LSRL-----VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ L N + +G+V+YT YAY +++G ILL++MIGAIVL LR R +KRQ
Sbjct: 121 QAPLGNVAAAENLTNAQALGRVIYTDYAYFFQLAGLILLVAMIGAIVLTLRDRPGVKRQS 180
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
I+ Q ++ KV S +G+
Sbjct: 181 IAVQNARTQAMAVETRKVPSRQGV 204
>gi|290958251|ref|YP_003489433.1| NADH dehydrogenase subunit NuoJ [Streptomyces scabiei 87.22]
gi|260647777|emb|CBG70882.1| NuoJ, NADH dehydrogenase subunit [Streptomyces scabiei 87.22]
Length = 283
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ F++ +A+I + V ++ ++S L V A +L GA F+ ++ +VV
Sbjct: 17 TGEAFQFWVLGTVAVIGALCTVFMKRAVHSALCLAGTMVILAVFYLANGAYFLGIVQIVV 76
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + +++ A E
Sbjct: 77 YTGAIMMLFLFVVMLVGVTAADSLKETIKGQRWLALLCGAGFGILLIAGIGNASLTEFSG 136
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
G NVE + +++T Y + E++G +L+ + +GA+VL R R + R ++L
Sbjct: 137 LGTANAGGNVEGLAALIFTDYVFAFELTGALLITAAVGAMVLTHRERTE--RPKTQRELA 194
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 195 EQRVREGKHLPPLPAPGV 212
>gi|256785932|ref|ZP_05524363.1| NADH dehydrogenase subunit J [Streptomyces lividans TK24]
gi|289769825|ref|ZP_06529203.1| NuoJ [Streptomyces lividans TK24]
gi|289700024|gb|EFD67453.1| NuoJ [Streptomyces lividans TK24]
Length = 285
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + V ++ ++S L + A +L GA F+ ++ +VV
Sbjct: 17 TGEAVQFWILGTVAVIGALCTVFMKKAVHSALCLAGTMIVLAVFYLANGAYFLGIVQIVV 76
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L +++ A +E
Sbjct: 77 YTGAIMMLFLFVVMLVGVTAADSLKETIKGQRWLALLSGLGFGILLIAGIGNASVSEFTG 136
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NVE I +++T+Y + EI+G +L+ + +GA+VL R R + R ++L
Sbjct: 137 LAQANANGNVEGIASLIFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RARTQRELS 194
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 195 EQRIRDGKHLPPLPAPGV 212
>gi|190571385|ref|YP_001975743.1| NADH dehydrogenase I, J subunit [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357657|emb|CAQ55101.1| NADH dehydrogenase I, J subunit [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 195
Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 121/195 (62%), Gaps = 6/195 (3%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
FFY F+ ++I+S+ V++VRNP+++V LIF FVN+A LF+LLGAEF+AM+ ++VY+GA
Sbjct: 3 FFFYFFAILSILSAVCVISVRNPVHAVLFLIFTFVNSAVLFILLGAEFIAMMVMIVYIGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V V FLF++MMLDID + + ++ +I + +
Sbjct: 63 VAVLFLFVVMMLDIDYIRLRQGFAKHCTLGAMLCVVFFLVISFVIRSSA---PNISNVIN 119
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML-RHRRDIKRQDISKQLESNP 184
+ NNV+ IG +LYT Y Y +SG +LL++++GAI L L ++ +K+Q++ KQL
Sbjct: 120 YNTNNVKAIGNLLYTDYMYAFHLSGILLLVAIVGAIALTLQDKKKGVKKQNVLKQL--TQ 177
Query: 185 DNSIVMVKVKSGKGI 199
+S+ +VK K GKG+
Sbjct: 178 SSSVKLVKAKFGKGV 192
>gi|326403105|ref|YP_004283186.1| NADH-quinone oxidoreductase subunit J [Acidiphilium multivorum
AIU301]
gi|325049966|dbj|BAJ80304.1| NADH-quinone oxidoreductase subunit J [Acidiphilium multivorum
AIU301]
Length = 216
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ +L FY+F+ + ++S+ +V+T RNP++SV LI AF+NA LF+L GAEF+AM+ ++V
Sbjct: 1 MIVTLAFYVFAAILLLSACMVITARNPVHSVLFLILAFINAGALFVLAGAEFLAMVLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI---VCASNFMVFSAE 118
YVGAV V FLF++MMLD+D +R IG + I +
Sbjct: 61 YVGAVAVLFLFVVMMLDVDFAALREGFQRYAPLGLLIGFILMVEIGAVAIGWTITPAAHL 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ +N +G ++YT+Y + E+ +LL++MIGAIVL R +RQDIS
Sbjct: 121 ASQVPMPAHLSNTAALGDLIYTRYMFAFELVALLLLVAMIGAIVLTHSGERRSRRQDIST 180
Query: 179 QLESNPDNSIVMVKVKSGKG 198
Q + D ++ MVK+ GKG
Sbjct: 181 QHQRPIDETLTMVKLGIGKG 200
>gi|319898891|ref|YP_004158984.1| NADH dehydrogenase I chain J [Bartonella clarridgeiae 73]
gi|319402855|emb|CBI76406.1| NADH dehydrogenase I chain J [Bartonella clarridgeiae 73]
Length = 206
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 88/198 (44%), Positives = 126/198 (63%), Gaps = 5/198 (2%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FFY+F+F+ +IS+ +VV+ RNP++SV LI AF NAA LFLL GAEF+ +I LVVYVGAV
Sbjct: 9 FFYIFAFIMLISAVIVVSARNPVHSVLFLILAFFNAAALFLLAGAEFLGLILLVVYVGAV 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF-----SAEGEL 121
V FLF++MMLD+D + + FIG++ A ++ F +
Sbjct: 69 AVLFLFVVMMLDVDFAELKSGALKYAPIGAFIGVIIAIELIFVFINNRFSPISEIHVTQP 128
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ + N + +G +LYT Y + EISG ILL++MIGAI+L LRHR +KRQ ++ Q+
Sbjct: 129 TSDSTQRTNTQALGDILYTDYVFYFEISGLILLVAMIGAIILTLRHRSGVKRQSVAVQVA 188
Query: 182 SNPDNSIVMVKVKSGKGI 199
+N+I + KV+SGKGI
Sbjct: 189 RTAENAIEIKKVESGKGI 206
>gi|302543435|ref|ZP_07295777.1| NADH dehydrogenase I, J subunit [Streptomyces hygroscopicus ATCC
53653]
gi|302461053|gb|EFL24146.1| NADH dehydrogenase I, J subunit [Streptomyces himastatinicus ATCC
53653]
Length = 295
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 44/196 (22%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ +A+I + + +R ++S SL + A +L GA F+ ++ +VVY
Sbjct: 16 EAVQFWVLGTVAVIGALCTILMRKAVHSALSLAGTMIVLAVFYLANGAYFLGVVQIVVYT 75
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GA+++ FLF++M++ + + +G + L +++CA +
Sbjct: 76 GAIMMLFLFVVMLVGVTAADSLKETLKGQRWLAALCGLGFGILLCAGIGNASLKTFDGLG 135
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
G NVE + +++T+Y + EI+G +L+ + +GA+VL R R + R ++
Sbjct: 136 QANSGGNVEGLAALVFTKYVFAFEITGALLITAAVGAMVLTHRERTERARSQ--REQSEE 193
Query: 184 PDNSIVMVKVKSGKGI 199
+ V G+
Sbjct: 194 RVRTGKHVPPLPAPGV 209
>gi|21222954|ref|NP_628733.1| NADH dehydrogenase subunit J [Streptomyces coelicolor A3(2)]
gi|5042268|emb|CAB44522.1| NuoJ, NADH dehydrogenase subunit [Streptomyces coelicolor A3(2)]
Length = 285
Score = 122 bits (306), Expect = 3e-26, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + V ++ ++S L + A +L GA F+ ++ +VV
Sbjct: 17 TGEAVQFWILGTVAVIGALCTVFMKKAVHSALCLAGTMIVLAVFYLANGAYFLGIVQIVV 76
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L +++ A +E
Sbjct: 77 YTGAIMMLFLFVVMLVGVTAADSLKETIKGQRWLALLSGLGFGILLIAGIGNASVSEFTG 136
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NVE I +++T+Y + EI+G +L+ + +GA+VL R R + R ++L
Sbjct: 137 LAQANANGNVEGIASLIFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RARTQRELS 194
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 195 EQRIRDGKHLPPLPAPGV 212
>gi|285017801|ref|YP_003375512.1| NADH-quinone oxidoreductase chain j (nadh dehydrogenaseI chain j)
(ndh-1, chain j) oxidoreductase [Xanthomonas albilineans
GPE PC73]
gi|283473019|emb|CBA15524.1| probable nadh-quinone oxidoreductase chain j (nadh dehydrogenaseI
chain j) (ndh-1, chain j) oxidoreductase protein
[Xanthomonas albilineans]
Length = 216
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 61/201 (30%), Positives = 108/201 (53%), Gaps = 4/201 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ F++F+ +A +++ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVNIAFWIFATIAAVAAGAVISVRNPVYAVLCLILTFFSIACVWLLVGAEFLGVTLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF----MVFS 116
VYVGAV+V FLF++MMLDID R + + +V +
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDSVRLREGWVRYLPVGLAVALAMLVQMVTLIGVKARTVAPF 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K L+TQ+ P E + IL ++++ A++L LR R IK Q+
Sbjct: 121 PADNAAAQAADTSNIAWLAKTLFTQFLLPFEFAAIILTVAVVAAVMLTLRKRTGIKTQNP 180
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
+Q + + MVK+ + K
Sbjct: 181 GEQSRVKAGDRLRMVKMDAEK 201
>gi|297192778|ref|ZP_06910176.1| NADH dehydrogenase subunit J [Streptomyces pristinaespiralis ATCC
25486]
gi|197721033|gb|EDY64941.1| NADH dehydrogenase subunit J [Streptomyces pristinaespiralis ATCC
25486]
Length = 279
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 45/200 (22%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + + ++ ++S L + A +L GA F+ ++ +VV
Sbjct: 11 TGEAVQFWVLGTIAVIGALCTILMKRAVHSALCLAGTMIILAVFYLANGAYFLGVVQIVV 70
Query: 62 YVGAVIVFFLFIIMMLDIDIEVA--EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
Y GA+++ FLF++M++ + + E K + +L + LI N + + G
Sbjct: 71 YTGAIMMLFLFVVMLVGVTAADSLKETLKGQRWLAAACGLGFGILLIAGIGNASLKNFNG 130
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ G NVE + +++T+Y + EI+G +L+ + +GA+VL R R + R ++
Sbjct: 131 LGAANSAHGGNVEGLAALIFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RAKTQRE 188
Query: 180 LESNPDNSIVMVKVKSGKGI 199
L + G+
Sbjct: 189 LSEQRVREGKHLPPLPAPGV 208
>gi|289641418|ref|ZP_06473582.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Frankia
symbiont of Datisca glomerata]
gi|289508754|gb|EFD29689.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Frankia
symbiont of Datisca glomerata]
Length = 277
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 92/200 (46%), Gaps = 4/200 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ F++ + +A++++ +V RN ++ L+ A ++L A F+ + +VV
Sbjct: 18 TGEAATFWVLAPVAVLAALGMVLARNAVHGALLLVTNLFCLAVFYMLQDAPFLGFVQIVV 77
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL--AAELIVCASNFMVFSAEG 119
Y GA++V FLF++M++ +D + RG + + + A L+ +
Sbjct: 78 YTGAIMVLFLFVLMLVGVDSSDSLVETLRGQRVAAIVLGVGFAGLLVFPIGGVIDNGTTA 137
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
G N++ I ++L+T Y + EI +L+++ +GA++L R R D K ++
Sbjct: 138 AGLAAANDGGNIQAIARLLFTDYVFAFEIISALLIIAAVGAMILGHRERVDGK--VTQRE 195
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ V G +
Sbjct: 196 MLRRRFAEGGRVTPVPGPAV 215
>gi|115278547|ref|YP_762337.1| NADH dehydrogenase subunit 6 [Sorghum bicolor]
gi|114309668|gb|ABI60885.1| NADH dehydrogenase subunit 6 [Sorghum bicolor]
Length = 271
Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats.
Identities = 62/201 (30%), Positives = 99/201 (49%), Gaps = 11/201 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLGLDFSAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM +I I R S IG++ +
Sbjct: 65 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLGY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
+ + +I+ S K +
Sbjct: 185 RNALDFRRTIMRRPRASTKTV 205
>gi|296268282|ref|YP_003650914.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Thermobispora bispora DSM 43833]
gi|296091069|gb|ADG87021.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermobispora
bispora DSM 43833]
Length = 296
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 42/183 (22%), Positives = 95/183 (51%), Gaps = 2/183 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +S+ F++ + ++++++F +V R +YS L ++ A L+ + A F+A + ++V
Sbjct: 1 MGESITFWVLAVVSVLAAFGLVLSRKAVYSALMLGVVMLSLAVLYAVQDAPFLAAVQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + +G + L ++ + V +
Sbjct: 61 YTGAVMMLFLFVLMLIGVDTSDSLVETIKGQRFWAIVAGLGFVALLGLAVGNVAVSAATG 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
K +NV ++ ++++T++ + E++ +L+ + +GA+VL R RR K K L
Sbjct: 121 LGEEGKASNVLSLAELIFTRHVFAFEVTSALLITAALGAMVLAHRERRTPKP--TQKDLS 178
Query: 182 SNP 184
Sbjct: 179 RRR 181
>gi|225631322|ref|ZP_03787996.1| NADH dehydrogenase I, J subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590973|gb|EEH12181.1| NADH dehydrogenase I, J subunit [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 195
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 121/195 (62%), Gaps = 6/195 (3%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
FFY F+ ++I+S+ V++VRNP+++V LIF FVN+A LF+LLGAEF+AM+ ++VY+GA
Sbjct: 3 FFFYFFAILSILSAVCVISVRNPVHAVLFLIFTFVNSAVLFILLGAEFIAMMVMIVYIGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V V FLF++MMLDID + + ++ +I + +
Sbjct: 63 VAVLFLFVVMMLDIDYIRLRQGFAKHCTLGAMLCVVFFLVISFVIRSSA---PNISNVIN 119
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML-RHRRDIKRQDISKQLESNP 184
+ NNV+ IG +LYT Y Y +SG +LL++++GAI L L ++ +K+Q++ KQL
Sbjct: 120 YNTNNVKAIGNLLYTDYMYAFHLSGILLLVAIVGAIALTLQDKKKGVKKQNVLKQL--TQ 177
Query: 185 DNSIVMVKVKSGKGI 199
+S+ ++K K GKG+
Sbjct: 178 SSSVKLIKAKFGKGV 192
>gi|29831389|ref|NP_826023.1| NADH dehydrogenase subunit J [Streptomyces avermitilis MA-4680]
gi|29608504|dbj|BAC72558.1| putative NADH dehydrogenase I chain J (complex I) [Streptomyces
avermitilis MA-4680]
Length = 280
Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ F++ +A+I + V ++ ++S L + A +L GA F+ ++ +VV
Sbjct: 12 TGEAFQFWILGTVAVIGALCTVLMKKAVHSALCLAGTMIILAVFYLANGAYFLGVVQIVV 71
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L ++ A E +
Sbjct: 72 YTGAIMMLFLFVVMLVGVTAADSLKETIKGQRWLALVCGLGFGTLLFAGIGNASIKEFDG 131
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NVE + +++T+Y + EI+G +L+ + +GA+VL R R + R ++L
Sbjct: 132 LGTANANGNVEGLAALIFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RAKTQRELS 189
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 190 EQRVREGKHLPPLPAPGV 207
>gi|239943485|ref|ZP_04695422.1| NADH dehydrogenase subunit J [Streptomyces roseosporus NRRL 15998]
gi|239989939|ref|ZP_04710603.1| NADH dehydrogenase subunit J [Streptomyces roseosporus NRRL 11379]
gi|291446956|ref|ZP_06586346.1| NADH dehydrogenase subunit J [Streptomyces roseosporus NRRL 15998]
gi|291349903|gb|EFE76807.1| NADH dehydrogenase subunit J [Streptomyces roseosporus NRRL 15998]
Length = 289
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 97/198 (48%), Gaps = 4/198 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ +A+I + V ++ ++S SL + A +L GA F+ ++ ++VY
Sbjct: 14 EAIQFWILGTVAVIGALSTVLMKKAVHSALSLAGTMIILAVFYLANGAYFLGIVQIIVYT 73
Query: 64 GAVIVFFLFIIMMLDIDIEVA--EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
GA+++ FLF++M++ + + E K + +L + LI N + + G
Sbjct: 74 GAIMMLFLFVVMLVGVTAADSLKETLKGQRWLAAGCSLGFGILLIAGIGNASLSTFNGLG 133
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ G NVE + +++T+Y + EI+G +L+ + +GA+VL R R + R ++L
Sbjct: 134 AANAQHGGNVEGLANLIFTKYVFAFEITGALLITATVGAMVLTHRERTE--RARTQRELA 191
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 192 EQRVREGKHLPPLPAPGV 209
>gi|239980143|ref|ZP_04702667.1| NADH dehydrogenase subunit J [Streptomyces albus J1074]
gi|291451998|ref|ZP_06591388.1| NADH dehydrogenase subunit J [Streptomyces albus J1074]
gi|291354947|gb|EFE81849.1| NADH dehydrogenase subunit J [Streptomyces albus J1074]
Length = 271
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A++ + V ++ ++S L + A +L GA F+ ++ +VV
Sbjct: 11 TGEAVQFWILGTVAVLGALSTVLMKKAVHSALCLAATMIVLAVFYLANGAYFLGIVQIVV 70
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L +++ A V ++
Sbjct: 71 YTGAIMMLFLFVVMLVGVTAADSLKETLKGQRWLAALAALGFGILLIAGIGQVGISQFNG 130
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
G NV+ + +++T+Y + EI+G +L+ + +GA++L R R + R ++L
Sbjct: 131 LAAANSGGNVQGLAALIFTKYVFAFEITGALLITATVGAMLLTHRERTE--RASTQRELA 188
Query: 182 SNPDNSIVMVKVKSGKGI 199
V G+
Sbjct: 189 EKRVRENTHVPPLPAPGV 206
>gi|318057834|ref|ZP_07976557.1| NADH:ubiquinone oxidoreductase subunit J [Streptomyces sp.
SA3_actG]
gi|318077144|ref|ZP_07984476.1| NADH:ubiquinone oxidoreductase subunit J [Streptomyces sp.
SA3_actF]
Length = 304
Score = 121 bits (303), Expect = 6e-26, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + V + ++S L + A +L GA F+ ++ +VV
Sbjct: 23 TGEAVQFWILGVVAVIGALCTVLMPKAVHSALCLAGTMIVLAVFYLANGAYFLGIVQIVV 82
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ + + +G + L ++ ++ +
Sbjct: 83 YTGAVMMLFLFVVMLVGVTAADSLKETIKGQRWLAVLCFLGFGALLVGGIGNASVSQFQG 142
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ G NV+ + + ++T Y + EI+G +L+ + +GA+VL R R + R +++
Sbjct: 143 TGRANAGGNVQGLAREIFTTYVFAFEITGALLITATVGAMVLTHRERTE--RALNQREMA 200
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 201 EKRVREGKHLPPLPAPGV 218
>gi|328884321|emb|CCA57560.1| NADH-ubiquinone oxidoreductase chain J [Streptomyces venezuelae
ATCC 10712]
Length = 275
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 4/198 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++ F++ +A+I + + +R ++S L + A +L GA F+ ++ +VVY
Sbjct: 14 EAFQFWVLGTVAVIGALCTILMRKAVHSALCLAGTMIILAVFYLANGAYFLGIVQIVVYT 73
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRG--FLGSFFIGILAAELIVCASNFMVFSAEGEL 121
GA+++ FLF++M++ + + +G + L N + G
Sbjct: 74 GAIMMLFLFVVMLVGVTAADSLKETIKGQRWWAVACGLGFGILLAAGIGNASLKEFTGLG 133
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ G NVE + +++T+Y + EI+G +L+ + +GA+VL R R + R ++L
Sbjct: 134 AANSAHGGNVEGLAALIFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RAATQRELS 191
Query: 182 SNPDNSIVMVKVKSGKGI 199
V G+
Sbjct: 192 EQRVREGKHVPPLPAPGV 209
>gi|302521203|ref|ZP_07273545.1| NADH dehydrogenase subunit J [Streptomyces sp. SPB78]
gi|302430098|gb|EFL01914.1| NADH dehydrogenase subunit J [Streptomyces sp. SPB78]
Length = 304
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + V + ++S L + A +L GA F+ ++ +VV
Sbjct: 23 TGEAVQFWILGVVAVIGALCTVLMPKAVHSALCLAGTMIVLAVFYLANGAYFLGIVQIVV 82
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ + + +G + L ++ ++ +
Sbjct: 83 YTGAVMMLFLFVVMLVGVTAADSLKETIKGQRWLAVLCFLGFGALLVGGIGNASVSQFQG 142
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ G NV+ + + ++T Y + EI+G +L+ + +GA+VL R R + R +++
Sbjct: 143 TGRANAGGNVQGLAREIFTTYVFAFEITGALLITATVGAMVLTHRERTE--RALNQREMA 200
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 201 EKRVREGKHLPPLPAPGV 218
>gi|42520778|ref|NP_966693.1| NADH dehydrogenase I, J subunit [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410518|gb|AAS14627.1| NADH dehydrogenase I, J subunit [Wolbachia endosymbiont of
Drosophila melanogaster]
Length = 195
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 78/195 (40%), Positives = 122/195 (62%), Gaps = 6/195 (3%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
FFY F+ ++I+S+ V++VRNP+++V LIF FVN+A LF+LLGAEF+AM+ L+VY+GA
Sbjct: 3 FFFYFFAILSILSAVCVISVRNPVHAVLFLIFTFVNSAVLFILLGAEFIAMMVLIVYIGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V V FLF++MMLDID + F + + +I + ++
Sbjct: 63 VAVLFLFVVMMLDIDYIRLRQGFAKHFTLGAILCGVFFLIISFVIRSSTLNISNVIN--- 119
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML-RHRRDIKRQDISKQLESNP 184
+ NNV+ IG +LYT Y Y +SG +LL++++GAI L L ++ +K+Q++ KQL
Sbjct: 120 YNANNVKAIGNLLYTDYMYAFHLSGILLLVAIVGAIALTLQDKKKGVKKQNVLKQL--TQ 177
Query: 185 DNSIVMVKVKSGKGI 199
+S+ +VK K GKG+
Sbjct: 178 SSSVKLVKAKFGKGV 192
>gi|58696815|ref|ZP_00372343.1| NADH dehydrogenase I, J subunit [Wolbachia endosymbiont of
Drosophila simulans]
gi|225630632|ref|YP_002727423.1| NADH dehydrogenase I, J subunit [Wolbachia sp. wRi]
gi|58536985|gb|EAL60140.1| NADH dehydrogenase I, J subunit [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592613|gb|ACN95632.1| NADH dehydrogenase I, J subunit [Wolbachia sp. wRi]
Length = 195
Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats.
Identities = 81/195 (41%), Positives = 123/195 (63%), Gaps = 6/195 (3%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
FFY FS ++I+S+ V++VRNP+++V LIF FVN+A LF+LLGAEF+AM+ L+VY+GA
Sbjct: 3 FFFYFFSILSILSAVCVISVRNPVHAVLFLIFTFVNSAVLFILLGAEFIAMMVLIVYIGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V V FLF++MMLDID + F + ++ +I + ++
Sbjct: 63 VAVLFLFVVMMLDIDYIRLRQGFAKHFTLGAILCVVFFLVISFVIRSSTLNISNVIN--- 119
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML-RHRRDIKRQDISKQLESNP 184
+ NNV+ IG +LYT Y Y +SG +LL++++GAI L L ++ IKRQ++ KQL
Sbjct: 120 YNTNNVKAIGNLLYTDYMYAFHLSGILLLVAIVGAIALTLQDKKKGIKRQNVLKQL--TQ 177
Query: 185 DNSIVMVKVKSGKGI 199
+S+ +VK K GKG+
Sbjct: 178 SSSVKLVKAKFGKGV 192
>gi|114321110|ref|YP_742793.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Alkalilimnicola ehrlichii MLHE-1]
gi|114227504|gb|ABI57303.1| NADH dehydrogenase subunit J [Alkalilimnicola ehrlichii MLHE-1]
Length = 198
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 119/195 (61%), Gaps = 1/195 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + FY+F+ + + ++ +V+T RNP++ L+ AF N+A L+++ GAEF+ + +VVY
Sbjct: 1 MEQVIFYVFAAVLLFAATMVITARNPVHCALFLVLAFFNSAILWVMAGAEFLGIALVVVY 60
Query: 63 VGAVIVFFLFIIMMLDI-DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
VGAV+V FLF++MMLDI E + G+ ++A +L + + A G +
Sbjct: 61 VGAVMVLFLFVVMMLDIGRSVHQEGFTRYLPAGALVAVLMAVQLGLVLVSDHTGIAGGVI 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ +N+ +G +LYT Y YP EI+G ILL+++I AIVL LR R K QD++KQ+
Sbjct: 121 PEVPADVDNIRGLGGLLYTTYVYPFEIAGAILLVAIIAAIVLTLRRREGTKHQDVAKQVR 180
Query: 182 SNPDNSIVMVKVKSG 196
++ + +V +KS
Sbjct: 181 VRREDRVRLVSMKSE 195
>gi|148259941|ref|YP_001234068.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Acidiphilium
cryptum JF-5]
gi|146401622|gb|ABQ30149.1| NADH dehydrogenase subunit J [Acidiphilium cryptum JF-5]
Length = 216
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 3/200 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ +L FY+F+ + ++S+ +V+T RNP++SV LI AF+NA LF+L GAEF+AM+ ++V
Sbjct: 1 MIVTLAFYVFAAILLLSACMVITARNPVHSVLFLILAFINAGALFVLAGAEFLAMVLVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI---VCASNFMVFSAE 118
YVGAV V FLF++MMLD+D +R IG + I +
Sbjct: 61 YVGAVAVLFLFVVMMLDVDFAALREGFQRYAPLGLLIGFILMVEIGAVAIGWTITPAAHL 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ +N +G ++YT+Y + E+ +LL++MIGAIVL R +RQDIS
Sbjct: 121 ASQVPMPAHLSNTAALGDLIYTRYMFAFELVALLLLVAMIGAIVLTHSGERRSRRQDISM 180
Query: 179 QLESNPDNSIVMVKVKSGKG 198
Q + D ++ MVK+ GKG
Sbjct: 181 QHQRPIDETLTMVKLGIGKG 200
>gi|254491551|ref|ZP_05104730.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Methylophaga thiooxidans DMS010]
gi|224463029|gb|EEF79299.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Methylophaga thiooxydans DMS010]
Length = 199
Score = 120 bits (302), Expect = 8e-26, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 109/195 (55%), Gaps = 4/195 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + FY F+ + + ++ +V+TVRNP+ + L+ AF +A ++L+L AEF+A+ ++VY
Sbjct: 1 MEKIIFYAFAAILLFAATMVITVRNPVRAALFLVLAFFTSAAIWLMLQAEFLAISLVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV+V FLF++MMLDID+ + + + L ++ N F +
Sbjct: 61 VGAVLVLFLFVVMMLDIDLAPLQEGFTKYLPLGIIVAALIVAEMITVLNAPQFDIA---A 117
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
V +N +G++LYT Y YP EI+ IL ++++ AI L LR K QD KQ+
Sbjct: 118 TAVAGESNTRMLGRLLYTVYVYPFEIASVILTVAIVAAITLTLREHSR-KLQDPGKQVAV 176
Query: 183 NPDNSIVMVKVKSGK 197
+ +V ++S K
Sbjct: 177 RKQERVRLVDLRSAK 191
>gi|330465211|ref|YP_004402954.1| NADH:ubiquinone oxidoreductase subunit J [Verrucosispora maris
AB-18-032]
gi|328808182|gb|AEB42354.1| NADH:ubiquinone oxidoreductase subunit J [Verrucosispora maris
AB-18-032]
Length = 256
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 96/197 (48%), Gaps = 2/197 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ + +A+ + ++ RN ++S L+ ++ ++L F+ M+ ++VY
Sbjct: 17 EAVTFWILAPLALAGAIGMIAARNAVHSALWLVLTMLSLGVFYVLQAGPFIGMVQIIVYT 76
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPR-KKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA+++ FLF++M++ D + + + + +G+ A L+ + E
Sbjct: 77 GAIMMLFLFVLMLVGRDASDSLIEVLRGQRIAAIGLGVGFAALLGSGAYRATQGTEAVGL 136
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
G NV++I ++L+T Y + E++ +L+ + IG ++L RR R+D +++
Sbjct: 137 EQANAGGNVQSIARLLFTDYIFAFELTAALLITATIGGMILAHVERRKEDRRDQVATMKA 196
Query: 183 NPDNSIVMVKVKSGKGI 199
K G G+
Sbjct: 197 RFAPG-NYPGPKPGPGV 212
>gi|63025105|ref|YP_232799.1| NADH dehydrogenase subunit 6 [Geodia neptuni]
gi|37961467|gb|AAP59164.1| NADH dehydrogenase subunit 6 [Geodia neptuni]
Length = 185
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 66/177 (37%), Positives = 102/177 (57%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+ IIS +V++ NP++SV L+ AF+ A+ LF+LL EF+A+I L+VYVGA+
Sbjct: 4 LFYLFALSIIISGVMVISALNPVHSVLWLVVAFIGASALFILLEVEFLALILLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IMML++ R G + +E+++ + + +
Sbjct: 64 AILFLFVIMMLNLTGLEGTDRSNYLPAGFIIGIVFLSEVLILQTRISTVESYRNSNWNFM 123
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
+ +N+E +G+VLYT Y Y ++ ILL+++IGAIVL R IKRQDI Q
Sbjct: 124 EASNIEVLGRVLYTNYCYLFILASLILLVALIGAIVLTHDTRVKIKRQDIFIQTSRQ 180
>gi|288917192|ref|ZP_06411561.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Frankia sp.
EUN1f]
gi|288351383|gb|EFC85591.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Frankia sp.
EUN1f]
Length = 317
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++ F+L + +A+I+ +V +R+ ++S L+ A +LL A F+ + ++VY
Sbjct: 19 EAWTFWLLAPVALIAGLGMVLMRSAVHSALLLVVNLFCVAVFYLLQDAPFLGFVQIIVYT 78
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-GILAAELIVCASNFMVFSAEGELS 122
GA++V FLF++M++ +D + RG + I G+ A L+V +
Sbjct: 79 GAIMVLFLFVLMLVGVDSSDSLVETLRGQRIAAVILGLGFAGLLVFPIGRAIDGGSAAGL 138
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
NV IGK+L+++Y + E +L+++ IG +VL R K K+
Sbjct: 139 DAANSEGNVTAIGKLLFSEYVFVFEAISALLVVAAIGTMVLGHREHTGEK--LTQKERMR 196
Query: 183 NPDNSIVMVKVKSGKGI 199
+ + G +
Sbjct: 197 RRFTEGGPITPRPGPKV 213
>gi|329935988|ref|ZP_08285788.1| NADH dehydrogenase subunit J [Streptomyces griseoaurantiacus M045]
gi|329304466|gb|EGG48344.1| NADH dehydrogenase subunit J [Streptomyces griseoaurantiacus M045]
Length = 284
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + V +R ++S SL + A +L GA F+ ++ +VV
Sbjct: 24 TGEAVQFWILGTVAVIGALCTVFMRRAVHSALSLAGTMIVLAVFYLANGAYFLGIVQIVV 83
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L +++ A + +
Sbjct: 84 YTGAIMMLFLFVVMLVGVTAADSLKETIKGQRWLALLCGLGFGVLLLAGIGNASLTQFDG 143
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NV+ + +++T+Y + EI+G +L+ + +GA+VL R R + R +++
Sbjct: 144 LSEANAPGNVQGLAALIFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RALTQREMS 201
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 202 ERRVREGKHLPPLPAPGV 219
>gi|238062220|ref|ZP_04606929.1| NADH dehydrogenase subunit J [Micromonospora sp. ATCC 39149]
gi|237884031|gb|EEP72859.1| NADH dehydrogenase subunit J [Micromonospora sp. ATCC 39149]
Length = 256
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F++ + +A++ + ++ RN ++S L+ + ++L F+ M+ ++VY
Sbjct: 17 EEVTFWILAPLALLGAIGMIAARNAVHSALWLVLTMLCLGVFYVLQAGPFIGMVQIIVYT 76
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-GILAAELIVCASNFMVFSAEGELS 122
GA+++ FLF++M++ D + RG + + G+ A L+ +
Sbjct: 77 GAIMMLFLFVLMLVGRDASDSLIETLRGQRIAAVVLGLGFAGLVGGGLYRGLGGVSAVGL 136
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
NV+ I ++L+T+Y + E++ +L+ + +GA+VL RR + D +++
Sbjct: 137 EQANAEGNVQGIARLLFTKYVFAFELTSALLITAAVGAMVLAHIERRREDKMDQIATMKA 196
Query: 183 NPDNSIVMVKVKSGKGI 199
K G G+
Sbjct: 197 RFAPG-NYPGPKPGPGV 212
>gi|182436768|ref|YP_001824487.1| NADH dehydrogenase subunit J [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326777363|ref|ZP_08236628.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
cf. griseus XylebKG-1]
gi|178465284|dbj|BAG19804.1| putative NADH dehydrogenase chain J [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326657696|gb|EGE42542.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
cf. griseus XylebKG-1]
Length = 288
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ +A+I + V ++ ++S SL + A +L GA F+ ++ +VVY
Sbjct: 14 EAIQFWILGTVAVIGALSTVLLKRAVHSALSLAGTMIVLAVFYLANGAYFLGIVQIVVYT 73
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRG--FLGSFFIGILAAELIVCASNFMVFSAEGEL 121
GA+++ FLF++M++ + + +G +L LI N + + EG
Sbjct: 74 GAIMMLFLFVVMLVGVTAADSLKETIKGQRWLALGCGLGFGILLIAGIGNASLSTFEGLG 133
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ G N+E + +++T+Y + EI+G +L+ + +GA+VL R R + R +++
Sbjct: 134 AANAAHGGNIEGLANLIFTKYVFAFEITGALLITATVGAMVLTHRERTE--RAKTQREMS 191
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 192 EERVRGKHLP-PLPAPGV 208
>gi|118472606|ref|YP_886415.1| NADH dehydrogenase subunit J [Mycobacterium smegmatis str. MC2 155]
gi|118173893|gb|ABK74789.1| NADH dehydrogenase subunit j [Mycobacterium smegmatis str. MC2 155]
Length = 252
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ +A++ + VV R +YS L ++ A L++ A F+ ++ +VVY
Sbjct: 19 EAVVFWVVGTVALVGAIGVVAARKAVYSAVFLACTMISLAVLYIAQDAPFLGVVQIVVYT 78
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV++ FLF++M++ +D+ + +G + I ++V A V A
Sbjct: 79 GAVMMLFLFVLMLIGVDLTESLVETIKGHRIAALIAGAGFGILVIAGIGNVSVAGFSGLA 138
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
G NVE + +++T+Y + E++ +L+ + +GA+VL R R + ++ ++L
Sbjct: 139 AANSGGNVEGLAALIFTRYLWAFELTSALLITAALGAMVLAHRERFERRK--TQRELAIE 196
Query: 184 PDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 197 RFQTGGHPTPLPNPGV 212
>gi|331699303|ref|YP_004335542.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Pseudonocardia dioxanivorans CB1190]
gi|326953992|gb|AEA27689.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Pseudonocardia dioxanivorans CB1190]
Length = 274
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 98/199 (49%), Gaps = 3/199 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+S+ F++ +A+ + +V RN ++S L+ ++ L+++ A F+ + ++VY
Sbjct: 20 ESIAFWILGIVALGGALGMVFARNAVHSALFLVMTMLSLGILYIVQQAPFLGFVQIIVYT 79
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS---NFMVFSAEGE 120
GAV++ FLF++M++ D + RG + + L L++ A+ + + G
Sbjct: 80 GAVMMLFLFVLMLVGRDSSDSVVEVLRGQRIAGLLLGLGLALLLVAAVARSLTSVTPAGL 139
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ L NN+ +G++++T Y P E++ +L+ + +GA+VL + +++ +
Sbjct: 140 GANLQGSNNNLPGLGRLIFTDYLLPFELTSALLITAALGAMVLAHAQTKSHEKRGQRATV 199
Query: 181 ESNPDNSIVMVKVKSGKGI 199
+ V G G+
Sbjct: 200 LARLRGEHARVSPLPGPGV 218
>gi|312200058|ref|YP_004020119.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Frankia sp.
EuI1c]
gi|311231394|gb|ADP84249.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Frankia sp.
EuI1c]
Length = 287
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++L F++ + +A+I + +V + ++ L+ A +LL A F+ + +VVY
Sbjct: 19 ETLTFWIIAPIAVIGALGMVFAKKAVHGALMLVANLFCVAVCYLLQDAPFLGFVQIVVYT 78
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-GILAAELIVCASNFMVFSAEGELS 122
GA++V FLF++M++ ++ + RG + + G+ A L+V + +
Sbjct: 79 GAIMVLFLFVLMLIGVESSESLVETLRGQRVAAVVLGLGFAGLLVFPLGKAIKNQPAAGV 138
Query: 123 RLVFK--GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
V + G N+ I ++L+TQY + E +L+++ +GA++L R R + K+
Sbjct: 139 ADVNQAGGGNIHAIARLLFTQYVFAFEAVSALLVIAAVGAMILSHRERTGPRPSQ--KET 196
Query: 181 ESNPDNSIVMVKVKSGKGI 199
++ G G+
Sbjct: 197 LRRRIAEGRVLTPVPGPGV 215
>gi|320009195|gb|ADW04045.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
flavogriseus ATCC 33331]
Length = 284
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/198 (23%), Positives = 97/198 (48%), Gaps = 5/198 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ +A++ + V ++ ++S SL + A +L GA F+ ++ +VVY
Sbjct: 16 EAVQFWILGTVAVVGALSTVLMKKAVHSALSLAGTMIVLAVFYLANGAYFLGIVQVVVYT 75
Query: 64 GAVIVFFLFIIMMLDIDIEVA--EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
GA+++ FLF++M++ + + E K + +L + LI + S G
Sbjct: 76 GAIMMLFLFVVMLVGVTAADSLKETLKGQRWLAAACGLGFGILLIAGIGQASLQSFNGLG 135
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ G NVE + +++T+Y + EI+G +L+ + +GA++L R R + R ++L
Sbjct: 136 AANAQHGGNVEGLANLIFTKYVFAFEITGALLITATVGAMLLTHRERTE--RAKTQRELS 193
Query: 182 SNPDNSIVMVKVKSGKGI 199
S + G+
Sbjct: 194 QERVRSSHLP-PLPAPGV 210
>gi|300782460|ref|YP_003762751.1| NADH dehydrogenase I subunit J [Amycolatopsis mediterranei U32]
gi|299791974|gb|ADJ42349.1| NADH dehydrogenase I subunit J [Amycolatopsis mediterranei U32]
Length = 291
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 90/203 (44%), Gaps = 6/203 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ ++++ + ++ RN ++S L+ ++ L+++ A F+ ++V
Sbjct: 18 TGEAIAFWVLGPVSLLGALGMIFSRNAVHSALWLVLTMLSLGALYMIQSAPFLGFTQIIV 77
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + RG + + + ++ +
Sbjct: 78 YTGAIMMLFLFVLMLVGRESSDSVVEVLRGQRLAATVLGIGLAALLATGIYRALENVTPA 137
Query: 122 SRL---VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML--RHRRDIKRQDI 176
L G + +G++++T Y +P E++ +L+ + IGA+VL RH + K
Sbjct: 138 IPLDSATPAGGGPKGLGRLIFTDYLFPFELTSALLITAAIGAMVLAFTDRHGKGGKLSQR 197
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
L G G+
Sbjct: 198 ELVLLRFRGEHDR-PSPLPGPGV 219
>gi|187477550|ref|YP_785574.1| NADH dehydrogenase I subunit J [Bordetella avium 197N]
gi|115422136|emb|CAJ48660.1| NADH dehydrogenase I chain J [Bordetella avium 197N]
Length = 210
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 1/195 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M S+ FYL +F+ ++++F V+T R+P+ +V LI AF NAA L++LLGAEF+A++ ++
Sbjct: 1 MTFTSVLFYLLAFVLVVAAFRVITARSPVTAVLHLILAFANAAMLWMLLGAEFLALLLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI I+ K IG + + F + G
Sbjct: 61 VYVGAVMVLFLFVVMMLDIRIDHLRHGLKTYLPLGLIIGGIMVVEMGFVL-FTTWGDAGP 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ NN +G+ +YTQY + +E+ +LL+ M+ AI L LR RRD K D + +
Sbjct: 120 QVVMAGDYNNARALGEAMYTQYVFGVEVGAALLLVGMVAAIALTLRRRRDAKYNDPAAAV 179
Query: 181 ESNPDNSIVMVKVKS 195
+ MVK+++
Sbjct: 180 RVRAKDRFRMVKMQA 194
>gi|81176537|ref|YP_398421.1| nad6 [Triticum aestivum]
gi|400642|sp|Q02500|NU6M_WHEAT RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|21826|emb|CAA44009.1| NADH dehydrogenase (ubiquinone) [Triticum aestivum]
gi|78675261|dbj|BAE47686.1| nad6 [Triticum aestivum]
gi|169649070|gb|ACA62631.1| nad6 [Triticum aestivum]
Length = 247
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F AMI+ VV++GA+ V
Sbjct: 23 VLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLGLDFSAMISPVVHIGAIAVS 82
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM +I I R S IG++ +
Sbjct: 83 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLRY 142
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 143 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 202
Query: 179 QLESNPDNSI 188
+ + + I
Sbjct: 203 RNALDSRSHI 212
>gi|226365389|ref|YP_002783172.1| NADH dehydrogenase subunit J [Rhodococcus opacus B4]
gi|226243879|dbj|BAH54227.1| NADH-quinone oxidoreductase chain J [Rhodococcus opacus B4]
Length = 272
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F++ + +A+I + VV+ +YS L + A ++ GA F+ ++ +VV
Sbjct: 20 TGEGVQFWVLATVAVIGALGVVSATKAVYSAIFLATTMIILAVFYIAQGAPFLGVVQIVV 79
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + L L++ +
Sbjct: 80 YTGAVMMLFLFVLMLIGVDSSESLVENLRGQRVAAIAAGLGFGLLLIGGFGRASVSAFTG 139
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR-RDIKRQDISKQL 180
G NV+ + ++++ +Y + E++G +L+ + IGA+VL R R K Q Q
Sbjct: 140 LDQANAGGNVQGLAELVFVRYVWAFELTGALLITATIGAMVLAHRERFERRKDQRELSQD 199
Query: 181 ESNPDNSIVMVKVKSGKGI 199
V G+
Sbjct: 200 RVREGAR---VTPLPSPGV 215
>gi|284992916|ref|YP_003411470.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Geodermatophilus obscurus DSM 43160]
gi|284066161|gb|ADB77099.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Geodermatophilus obscurus DSM 43160]
Length = 273
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+ + +V RN ++S LI + +++ A F+ + ++V
Sbjct: 8 TGEAVVFWVLGPIALAGALGMVMSRNAVHSALWLINTMLALGVFYVVQEAPFLGAVQIIV 67
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI---GILAAELIVCASNFMVFSAE 118
Y GA+++ FLF++M++ D + RG + + G A A
Sbjct: 68 YTGAIMILFLFVLMLVGRDSSDSVVETLRGQRVAALLLGAGFAAVVGAGVARATQDLPVA 127
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + +N+E I +LY++Y E++G +L+ + +GA+VL R +R K
Sbjct: 128 GLGAVQGAETSNIEAIAGLLYSRYLLAFEVTGALLITAAVGALVLTHVEREAEER-RTQK 186
Query: 179 QLESNP 184
+L
Sbjct: 187 ELSRAR 192
>gi|295837116|ref|ZP_06824049.1| NADH dehydrogenase I, J subunit [Streptomyces sp. SPB74]
gi|197697227|gb|EDY44160.1| NADH dehydrogenase I, J subunit [Streptomyces sp. SPB74]
Length = 283
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 91/198 (45%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + V + ++S L + A +L GA F+ ++ +VV
Sbjct: 23 TGEAVQFWVLGVVAVIGALCTVLMPKAVHSALCLAGTMIVLAVFYLANGAYFLGIVQIVV 82
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ + + +G + L ++ ++ +
Sbjct: 83 YTGAVMMLFLFVVMLVGVTAADSLKETIKGQRWLAVLCFLGFGALLVGGIGNASVSQFQG 142
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ G NV+ + + ++T Y + EI+G +L+ + +GA+VL R R + R +++
Sbjct: 143 TGRANAGGNVQGLAREIFTTYVFAFEITGALLITATVGAMVLTHRERTE--RALNQREMA 200
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 201 EKRVREGKHLPPLPAPGV 218
>gi|325921402|ref|ZP_08183259.1| NADH dehydrogenase subunit J [Xanthomonas gardneri ATCC 19865]
gi|325548160|gb|EGD19157.1| NADH dehydrogenase subunit J [Xanthomonas gardneri ATCC 19865]
Length = 227
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 9 MDWVKIAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 68
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 69 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPVGVIVAVAMFAQMVTLIGVKARSATPF 128
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 129 PADNAAAQAADVSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 188
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
Q + + MVK+ K +
Sbjct: 189 GDQSRVKAGDRLRMVKMAVEKPV 211
>gi|289665182|ref|ZP_06486763.1| NADH dehydrogenase subunit J [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 227
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 9 MDWVTIAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 68
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 69 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKSRSATPF 128
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 129 PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 188
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q + + MVK+ K +
Sbjct: 189 GEQSRVKAGDRLRMVKMAVEKPV 211
>gi|114151645|ref|YP_740422.1| NADH dehydrogenase subunit 6 [Zea mays subsp. parviglumis]
gi|1843454|emb|CAA66370.1| mitochondrial complex I subunit 6 [Zea mays]
gi|93116052|gb|ABE98685.1| NADH dehydrogenase subunit 6 [Zea mays subsp. mays]
gi|93116096|gb|ABE98728.1| NADH dehydrogenase subunit 6 [Zea mays subsp. mays]
gi|93116144|gb|ABE98775.1| NADH dehydrogenase subunit 6 [Zea mays subsp. mays]
gi|102567978|gb|ABF70862.1| NADH dehydrogenase subunit 6 [Zea mays subsp. parviglumis]
gi|102579645|gb|ABF70925.1| NADH dehydrogenase subunit 6 [Zea mays subsp. mays]
Length = 220
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLGLDFSAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL----- 124
FLF++MM +I I R S IG++ + +
Sbjct: 65 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLKY 124
Query: 125 ------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
V N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLE 181
+
Sbjct: 185 RNA 187
>gi|159039966|ref|YP_001539219.1| NADH dehydrogenase subunit J [Salinispora arenicola CNS-205]
gi|157918801|gb|ABW00229.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Salinispora
arenicola CNS-205]
Length = 256
Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ + +A++ + +V RN ++S L+ + +++ F+ ++ ++VY
Sbjct: 17 EAVTFWILAPLALLGAIGMVAARNAVHSALWLVLTMLCLGVFYVVQAGPFIGLVQIIVYT 76
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFL-GSFFIGILAAELIVCASNFMVFSAEGELS 122
GA+++ FLF++M++ + RG + +GI A L+ +
Sbjct: 77 GAIMMLFLFVLMLVGRGASDSLIETLRGQRIAALVLGIGFAGLVGTGLYRALAGGTAAGL 136
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
NV+ + ++L+T+Y E++ +L+ + +GA+VL RR R D +++
Sbjct: 137 TAANAEGNVQGVARLLFTKYVLAFELTSALLITAAVGAMVLAHVERRREDRMDQVATMKA 196
Query: 183 NPDNSIVMVKVKSGKGI 199
K G G+
Sbjct: 197 RFRPG-NYPGPKPGPGV 212
>gi|118465874|ref|YP_883194.1| NADH dehydrogenase subunit J [Mycobacterium avium 104]
gi|254776464|ref|ZP_05217980.1| NADH dehydrogenase subunit J [Mycobacterium avium subsp. avium ATCC
25291]
gi|118167161|gb|ABK68058.1| NADH dehydrogenase subunit j [Mycobacterium avium 104]
Length = 274
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + VV N +YS L + A +++ A F+ ++ +VV
Sbjct: 27 TGEAVTFWVLGALAVIGALGVVLAVNAVYSAMFLAMTMIILAVFYMIQDALFLGVVQVVV 86
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + + +++ A+ V S
Sbjct: 87 YTGAVMMLFLFVLMLIGVDSAESLKETLRGQRVAAVAAGVGFGILLIAAVGNVASGGFAG 146
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NVE + +++++Y + E++ +L+ + +GA+VL R R + ++ ++L
Sbjct: 147 LTTANANGNVEGLAALIFSRYLWAFELTSALLITAAVGAMVLAHRERFERRK--TQRELS 204
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 205 QERFRAGGHPTPLPNPGV 222
>gi|41409308|ref|NP_962144.1| NADH dehydrogenase subunit J [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398128|gb|AAS05758.1| NuoJ [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 274
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + VV N +YS L + A +++ A F+ ++ +VV
Sbjct: 27 TGEAVTFWVLGALAVIGALGVVLAVNAVYSAMFLAMTMIILAVFYMIQDALFLGVVQVVV 86
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + + +++ A+ V S
Sbjct: 87 YTGAVMMLFLFVLMLIGVDSAESLRETLRGQRVAAVAAGVGFGILLIAAVGNVASGGFAG 146
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NVE + +++++Y + E++ +L+ + +GA+VL R R + ++ ++L
Sbjct: 147 LTTANANGNVEGLAALIFSRYLWAFELTSALLITAAVGAMVLAHRERFERRK--TQRELS 204
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 205 QERFRAGGHPTPLPNPGV 222
>gi|256396783|ref|YP_003118347.1| NADH dehydrogenase subunit J [Catenulispora acidiphila DSM 44928]
gi|256363009|gb|ACU76506.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Catenulispora
acidiphila DSM 44928]
Length = 287
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++ FY+ +A++ + V + ++S SL + A +L GA F+ ++ +VVY
Sbjct: 25 EAFQFYVLGAVALLGALGTVFSKKAVHSALSLAMTMICLAMFYLAQGAYFLGVVQIVVYT 84
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL-AAELIVCASNFMVFSAEGELS 122
GA+++ FLF++M++ + + +G + + A LI+ A
Sbjct: 85 GAIMMLFLFVLMLVGVSSADSLVETIKGQRKLAVLAAIAFAVLIMVALGRARLGTFAGSG 144
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
G NV+N+ +++++Y + E++ +L+ + +GA+V+ R R ++ ++L
Sbjct: 145 PANAGGGNVKNLADLIFSKYFWAFEVTSALLITAAVGAMVMTHRERLVARKSQ--RELVE 202
Query: 183 NPDNSIVMVKVKSGKGI 199
+ + + G+
Sbjct: 203 DRVRTGKRMTPLPTPGV 219
>gi|120402874|ref|YP_952703.1| NADH dehydrogenase subunit J [Mycobacterium vanbaalenii PYR-1]
gi|119955692|gb|ABM12697.1| NADH dehydrogenase subunit J [Mycobacterium vanbaalenii PYR-1]
Length = 241
Score = 117 bits (294), Expect = 7e-25, Method: Composition-based stats.
Identities = 44/198 (22%), Positives = 98/198 (49%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ F++F+ +++ + VV +YS SL + A L++ A F+ ++ +VV
Sbjct: 1 MGEAVLFWVFAVVSVTGALGVVAAPKAVYSAISLATTMIALAVLYIAQDAPFLGVVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + + L +++ A V +
Sbjct: 61 YTGAVMMLFLFVLMLIGVDSSESLVETLRGQRVAAIVVGLGFGVLLVAGVGNVSATGFVG 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ NVE + +++T+Y + E++G +L+ + +GA+VL R R + ++ ++L
Sbjct: 121 LDQANEDGNVEGLAALIFTKYLWAFELTGALLITAALGAMVLAHRERFERRK--TQRELA 178
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ G+
Sbjct: 179 AERFAPGGHPTTLPNPGV 196
>gi|260223135|emb|CBA33395.1| NADH-quinone oxidoreductase subunit J [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 260
Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 55/175 (31%), Positives = 99/175 (56%), Gaps = 1/175 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY+FS + + ++F V+T RNP+++ L+ F AA +++LL AEF+++ ++
Sbjct: 1 MNVTTGLFYVFSAVLLFAAFRVITARNPVHAALYLVLTFFQAAMIWMLLKAEFLSITLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAEG 119
VYVGAV+V FLF++MM+DI++E + F + +G ++A E+ +
Sbjct: 61 VYVGAVMVLFLFVVMMMDINVENLRVGFWKHFPLAAIVGVVIALEMAAVLMGGFRVVDDP 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ NN + +GK+L+TQY LE++ ILL++MI + +Q
Sbjct: 121 NAVATAAEANNAKELGKLLFTQYLVQLEVAAAILLVAMIXXXXXXXXSKWTQPKQ 175
>gi|108798541|ref|YP_638738.1| NADH dehydrogenase subunit J [Mycobacterium sp. MCS]
gi|119867641|ref|YP_937593.1| NADH dehydrogenase subunit J [Mycobacterium sp. KMS]
gi|126434139|ref|YP_001069830.1| NADH dehydrogenase subunit J [Mycobacterium sp. JLS]
gi|108768960|gb|ABG07682.1| NADH dehydrogenase subunit J [Mycobacterium sp. MCS]
gi|119693730|gb|ABL90803.1| NADH dehydrogenase subunit J [Mycobacterium sp. KMS]
gi|126233939|gb|ABN97339.1| NADH dehydrogenase subunit J [Mycobacterium sp. JLS]
Length = 249
Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 94/196 (47%), Gaps = 2/196 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ +A+I + VV+ +YS L + A L++ A F+ ++ +VVY
Sbjct: 15 EAVVFWILGGIALIGALGVVSAPKAVYSAIFLATTMIALAVLYIAQEALFLGVVQIVVYT 74
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV++ FLF++M++ +D + RG + + +++ A V ++
Sbjct: 75 GAVMMLFLFVLMLVGVDNSESLVETIRGQRVAAIAVGVGFGVLLIAGIGTVSTSGFTGLP 134
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
NVE + +++T+Y + E++G +L+ + +GA+VL R R + ++ ++L
Sbjct: 135 DANSSGNVEGLAALIFTRYLWAFELTGALLITAALGAMVLAHRERFEHRK--TQRELSIE 192
Query: 184 PDNSIVMVKVKSGKGI 199
G+
Sbjct: 193 RFQDGGHATPMPNPGV 208
>gi|94502583|ref|YP_588429.1| NADH dehydrogenase subunit 6 [Zea mays subsp. mays]
gi|40795022|gb|AAR91066.1| NADH dehydrogenase subunit 6 [Zea mays]
Length = 220
Score = 117 bits (294), Expect = 8e-25, Method: Composition-based stats.
Identities = 61/186 (32%), Positives = 93/186 (50%), Gaps = 11/186 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSFALVSGLMVVRAKNPVHSVLFFILVFCDTSGLLILLGLDFFAMIFLVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL----- 124
FLF++MM +I I R S IG++ + +
Sbjct: 65 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLKY 124
Query: 125 ------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNP 184
+ +
Sbjct: 185 RNALDF 190
>gi|170676855|ref|YP_001742098.1| NADH dehydrogenase subunit 6 [Suberites domuncula]
gi|170649721|emb|CAM84213.1| NADH dehydrogenase subunit 6 [Suberites domuncula]
Length = 189
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 73/180 (40%), Positives = 105/180 (58%), Gaps = 3/180 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+F I+S +V++ NP++SVF LI AF +AA LF+LL EF+A I L+VYVGA+
Sbjct: 4 LFYLFAFGVILSGIMVISALNPVHSVFWLIVAFTSAALLFILLEVEFIAFIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDI-DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL- 124
+ FLF+IMML++ D+ IG++ ++ S++ S R
Sbjct: 64 AILFLFVIMMLNLTDLGNNPQDMSNYMPTGLIIGVVVILEVLIFSSWKSNSEGSPYLRWD 123
Query: 125 -VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
+ K +N+E +G+VLYT Y Y ++ FILL +MIGAIVL IKRQD Q+
Sbjct: 124 YIEKTSNIEVLGRVLYTDYYYLFILASFILLSAMIGAIVLTQTKSVGIKRQDSFTQVSRQ 183
>gi|284794666|ref|YP_003412024.1| NADH dehydrogenase subunit 6 [Lubomirskia baicalensis]
gi|284098135|gb|ADB78066.1| NADH dehydrogenase subunit 6 [Lubomirskia baicalensis]
Length = 195
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 72/188 (38%), Positives = 101/188 (53%), Gaps = 11/188 (5%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+ IIS +V++ NP++SV LI AF +A+ LF+LL EF+A+I L+VYVGA+
Sbjct: 4 LFYLFTLGVIISGIMVISALNPVHSVLWLIVAFTSASALFILLEVEFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG------- 119
+ FLF+IMML++ F IG++ I + S
Sbjct: 64 AILFLFVIMMLNLTDLEGGGDMSNYLPAGFIIGVVFLFEIAHVMGGRMVSWPHGGISGTL 123
Query: 120 ----ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
++ NVE +G+VLYT Y Y I+ FILL++MIGAIVL + +IKRQD
Sbjct: 124 SSDIAQPAILLGNPNVEVLGRVLYTDYYYLFIIASFILLVAMIGAIVLTHDSKTEIKRQD 183
Query: 176 ISKQLESN 183
I Q
Sbjct: 184 IFIQTSRQ 191
>gi|111022881|ref|YP_705853.1| NADH dehydrogenase subunit J [Rhodococcus jostii RHA1]
gi|110822411|gb|ABG97695.1| probable NADH dehydrogenase subunit J [Rhodococcus jostii RHA1]
Length = 269
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 89/199 (44%), Gaps = 4/199 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F++ + +A+I + VV+ +YS L + A ++ GA F+ ++ +VV
Sbjct: 17 TGEGVQFWVLATVAVIGALGVVSATKAVYSAIFLATTMIILAVFYIAQGALFLGVVQIVV 76
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + L L++ +
Sbjct: 77 YTGAVMMLFLFVLMLIGVDSSESLVENLRGQRVAAIAAGLGFGLLLIGGIGSASVSAFTG 136
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR-RDIKRQDISKQL 180
NVE + ++++ +Y + E++G +L+ + IGA+VL R R K Q Q
Sbjct: 137 LDQANAAGNVEGLAELVFVRYVWAFELTGALLITATIGAMVLAHRERFERRKDQRELSQD 196
Query: 181 ESNPDNSIVMVKVKSGKGI 199
V G+
Sbjct: 197 RVREGAR---VTPLPSPGV 212
>gi|58582849|ref|YP_201865.1| NADH dehydrogenase subunit J [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427443|gb|AAW76480.1| NADH-ubiquinone oxidoreductase NQO10 subunit [Xanthomonas oryzae
pv. oryzae KACC10331]
Length = 227
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +L FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 9 MDWVTLAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 68
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 69 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIMAVAMLAQMVTLIGVKARSATPF 128
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 129 PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 188
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q + + MVK+ K +
Sbjct: 189 GEQSRVKAGDRLRMVKMAVEKPV 211
>gi|38638285|ref|NP_943690.1| NADH dehydrogenase subunit 6 [Chara vulgaris]
gi|32966599|gb|AAP92182.1| NADH dehydrogenase subunit 6 [Chara vulgaris]
Length = 200
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F +FS +A++S +V+ RNP++SV LI F N +GL +LLG +F AMI LVVYVGA
Sbjct: 2 ILFSIFSSIALVSGVMVIRARNPVHSVLFLILVFCNTSGLLVLLGLDFFAMIFLVVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMV 114
+ V FLF++MML+I I R IG++ I
Sbjct: 62 IAVLFLFVVMMLNIKIAEIHENVLRYLPVGGIIGLIFLLEIFLVVDNDYIPILPTELSTT 121
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + N+E +G +LYT Y Y +S ILL++MIGAIVL + +KRQ
Sbjct: 122 VFQYTVYASKIQSWTNLETLGNLLYTTYFYLFLVSSLILLVAMIGAIVLTMHKTTQVKRQ 181
Query: 175 DISKQLESNPDNSIVMVK 192
D+ +Q + +I ++
Sbjct: 182 DVFQQNMIDFQKTIKKIR 199
>gi|294624669|ref|ZP_06703339.1| NADH dehydrogenase subunit J [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666768|ref|ZP_06732002.1| NADH dehydrogenase subunit J [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292601025|gb|EFF45092.1| NADH dehydrogenase subunit J [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292603429|gb|EFF46846.1| NADH dehydrogenase subunit J [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 219
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M S+ FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVSIAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKARSATPF 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 121 PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q + + MVK+ K +
Sbjct: 181 GEQSRVKAGDRLRMVKMAVEKPV 203
>gi|62161302|ref|YP_214868.1| NADH dehydrogenase subunit 6 [Axinella corrugata]
gi|55275033|gb|AAV49311.1| NADH dehydrogenase subunit 6 [Axinella corrugata]
Length = 183
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 71/177 (40%), Positives = 101/177 (57%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF I+S +V++ NP++SV LI AF +A LF+LL EF+A++ L+VYVGA+
Sbjct: 4 LFYLFXLSVILSGIMVISAFNPVHSVLWLIVAFTSATALFILLEVEFIALMFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IMML++ F IG++ S+F S+ L+
Sbjct: 64 AILFLFVIMMLNLTDXEGGEDMSNYLPAGFIIGVVFLINCRMVSHFGQQSSYYISWDLIE 123
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
K N+E +G+VLYT Y Y I+ FILL++MIG IVL R +IKRQ+I Q
Sbjct: 124 KAPNIEVLGRVLYTNYYYLFIIASFILLVAMIGVIVLTHDTRSEIKRQNIFLQTSRQ 180
>gi|315445438|ref|YP_004078317.1| NADH dehydrogenase subunit J [Mycobacterium sp. Spyr1]
gi|315263741|gb|ADU00483.1| NADH dehydrogenase subunit J [Mycobacterium sp. Spyr1]
Length = 239
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/198 (22%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ F++ + +++ + V+ +YS SL + A L++ GA F+ ++ +VV
Sbjct: 1 MTETILFWVMAVVSVGGALGVIAAPKAVYSAMSLAATMIALAVLYIAQGAPFLGVVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++MM+ +D + RG + L +++ A V +
Sbjct: 61 YTGAVMMLFLFVLMMIGVDSSESLVETLRGQRIAALAVGLGFGILLIAGIGSVSATGIVG 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
G NVE + +++T+Y + E++G +L+ + +GA+VL R R ++ ++L
Sbjct: 121 LDQANGGGNVEGLAALIFTKYLWAFELTGALLITAALGAMVLAHRERFQRRK--TQRELA 178
Query: 182 SNPDNSIVMVKVKSGKGI 199
G+
Sbjct: 179 VERFAPGGHPTTLPNPGV 196
>gi|164420802|ref|YP_001648470.1| NADH dehydrogenase subunit 6 [Ephydatia muelleri]
gi|158938918|gb|ABW83846.1| NADH dehydrogenase subunit 6 [Ephydatia muelleri]
Length = 196
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 72/189 (38%), Positives = 101/189 (53%), Gaps = 12/189 (6%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+ IIS +V++ NP++SV LI AF +A+ LF+LL EF+A+I L+VYVGA+
Sbjct: 4 LFYLFTLGVIISGIMVISALNPVHSVLWLIVAFTSASALFILLEVEFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE-------- 118
+ FLF+IMML++ F IG++ I + S
Sbjct: 64 AILFLFVIMMLNLTDLEGGGDMSNYLPAGFIIGVVFLFEIAHVMGGRMVSWPHGGISGTL 123
Query: 119 ----GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
++ NVE +G+VLYT Y Y I+ FILL++MIGAIVL + +IKRQ
Sbjct: 124 SSDIAAQPAILLGNPNVEVLGRVLYTDYYYLFIIASFILLVAMIGAIVLTHDSKTEIKRQ 183
Query: 175 DISKQLESN 183
DI Q
Sbjct: 184 DIFIQTSRQ 192
>gi|166712605|ref|ZP_02243812.1| NADH dehydrogenase subunit J [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 219
Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats.
Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +L FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVTLAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKARSATPF 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 121 PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q N + MVK+ K +
Sbjct: 181 GEQSRVKAGNRLRMVKMAVEKPV 203
>gi|270158105|ref|ZP_06186762.1| NADH-quinone oxidoreductase J subunit [Legionella longbeachae
D-4968]
gi|289163630|ref|YP_003453768.1| NADH-quinone oxidoreductase chain J [Legionella longbeachae NSW150]
gi|269990130|gb|EEZ96384.1| NADH-quinone oxidoreductase J subunit [Legionella longbeachae
D-4968]
gi|288856803|emb|CBJ10614.1| NADH-quinone oxidoreductase chain J [Legionella longbeachae NSW150]
Length = 214
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 66/208 (31%), Positives = 115/208 (55%), Gaps = 15/208 (7%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FY+F+ +AI ++F+V+ NP+ SV L+ F +A L++L AEF+A+I ++VYVG
Sbjct: 7 QVIFYIFAALAIGAAFMVIIQDNPVRSVLFLVLTFFASAALWILAEAEFLALILILVYVG 66
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV+ FLF++MML+ID+E+ + KR + L L++ + F E+
Sbjct: 67 AVMTLFLFVVMMLNIDVEIMKSHYKRYLPFGLILVALFIGLLMVSIPSGTFKKNVEVKGY 126
Query: 125 VFKG---------------NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+N E +G VLYT Y EI+ +LL+++I AI L+ R R
Sbjct: 127 AINSQLLEVKQNGAEQQPLSNTEALGMVLYTDYLLAFEIAAALLLIAIISAITLVHRGPR 186
Query: 170 DIKRQDISKQLESNPDNSIVMVKVKSGK 197
KRQ++ +Q+ ++ + + ++ +K+ K
Sbjct: 187 KSKRQNVKQQILTHKNQRVELINMKAEK 214
>gi|78048400|ref|YP_364575.1| NADH dehydrogenase subunit J [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78036830|emb|CAJ24523.1| NADH-ubiquinone oxidoreductase NQO10 subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
Length = 219
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +L FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 1 MDWVTLAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 61 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKARSATPF 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 121 PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 180
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q + + MVK+ K +
Sbjct: 181 GEQSRVKAGDRLRMVKMAVEKPV 203
>gi|319950460|ref|ZP_08024374.1| NADH:ubiquinone oxidoreductase subunit J [Dietzia cinnamea P4]
gi|319435883|gb|EFV91089.1| NADH:ubiquinone oxidoreductase subunit J [Dietzia cinnamea P4]
Length = 268
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 93/186 (50%), Gaps = 6/186 (3%)
Query: 1 MVM--QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMIT 58
M+ +S+ F++ + +A+ + VV +YS L V+ A L++ GA F+ +
Sbjct: 1 MMAAGESVLFWILATVAVAGALGVVAAPRAVYSALCLAATMVSLAVLYMAQGAVFLGVGQ 60
Query: 59 LVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
+VVY GAV+V FLF++M++ ++ + + RG + + L V + +
Sbjct: 61 IVVYTGAVMVLFLFVVMLIGVESSDSLVERIRGHRVAAILAGLGFG--VLLATGFARAEL 118
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ G+ V + ++L++++ + E++G +L+++ +GA+VL R R + +
Sbjct: 119 PPFAGFAAGGSEVPALAELLFSRHVWAFELTGVLLIIATLGAMVLAHRERFTGR--LTQR 176
Query: 179 QLESNP 184
QL
Sbjct: 177 QLSEQR 182
>gi|315122716|ref|YP_004063205.1| NADH dehydrogenase subunit J [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496118|gb|ADR52717.1| NADH dehydrogenase subunit J [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 148
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 115/144 (79%), Positives = 130/144 (90%)
Query: 56 MITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
MITLVVYVGAVIV FLFIIMMLDID+E A+PR+ R FLG+FFIGILAAEL VCASN +VF
Sbjct: 1 MITLVVYVGAVIVLFLFIIMMLDIDVEEAKPRRNRPFLGAFFIGILAAELFVCASNLLVF 60
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
EGE+SRLVF+GNN E+IG+VLYT+Y YPLEISGFILLLSMIGAIVLMLRHR IKRQ+
Sbjct: 61 GLEGEVSRLVFRGNNTEDIGEVLYTKYIYPLEISGFILLLSMIGAIVLMLRHRPGIKRQN 120
Query: 176 ISKQLESNPDNSIVMVKVKSGKGI 199
ISKQL+SNP NS+ +VKVKSG+GI
Sbjct: 121 ISKQLKSNPGNSVTVVKVKSGEGI 144
>gi|21243423|ref|NP_643005.1| NADH dehydrogenase subunit J [Xanthomonas axonopodis pv. citri str.
306]
gi|21108975|gb|AAM37541.1| NADH-ubiquinone oxidoreductase NQO10 subunit [Xanthomonas
axonopodis pv. citri str. 306]
Length = 220
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 63/203 (31%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 2 MDWVTIAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 61
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 62 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKARSATPF 121
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 122 PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 181
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q + + MVK+ K +
Sbjct: 182 GEQSRVKAGDRLRMVKMAVEKPV 204
>gi|145596567|ref|YP_001160864.1| NADH dehydrogenase subunit J [Salinispora tropica CNB-440]
gi|145305904|gb|ABP56486.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Salinispora
tropica CNB-440]
Length = 256
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/197 (21%), Positives = 93/197 (47%), Gaps = 2/197 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ + +A+I + +V RN ++S L+ + ++L F+ ++ ++VY
Sbjct: 17 EAVTFWILAPLALIGAIGMVAARNAVHSALMLVLTMLCLGIFYVLQAGPFIGVVQIIVYT 76
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFL-GSFFIGILAAELIVCASNFMVFSAEGELS 122
GA+++ FLF++M++ + RG + +G+ A L+ + +
Sbjct: 77 GAIMMLFLFVLMLVGRGASDSLIETLRGQRIAALVLGVGFAGLVGTGMYRALAGSTAVGL 136
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
NV+ I ++L+T+Y E++ +L+ + +GA+VL RR R D +++
Sbjct: 137 TTANAEGNVQGIARLLFTKYVLAFELTSALLITAAVGAMVLAHIERRREDRMDQVATMKA 196
Query: 183 NPDNSIVMVKVKSGKGI 199
K G G+
Sbjct: 197 RFRPG-NYPGPKPGPGV 212
>gi|110816045|ref|YP_684376.1| NADH dehydrogenase subunit 6 [Oltmannsiellopsis viridis]
gi|86450256|gb|ABC96335.1| NADH dehydrogenase subunit 6 [Oltmannsiellopsis viridis]
Length = 207
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 67/204 (32%), Positives = 109/204 (53%), Gaps = 17/204 (8%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FYLFS +A+IS+ V +NP++SV LI F NA+GL +L+G +F+A+I ++VYVG
Sbjct: 2 NFLFYLFSSLALISAVFVTQAKNPVHSVLFLILVFFNASGLLILMGLDFIALILMIVYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE---- 120
A+ FLF++M+LDI E ++ R +G+L I +
Sbjct: 62 AITTLFLFVVMLLDIKTEEVSEKRLRYLPIGGLLGVLFLVQIFVVIENSLVPHWVHVPFT 121
Query: 121 -------------LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ L N+E +G+VLYT Y+ ++ F+LL++MIG+IVL +
Sbjct: 122 NNPVILDHLQYLKWNTLTDNYTNIEALGQVLYTVYSLHFILASFVLLVAMIGSIVLTMVK 181
Query: 168 RRDIKRQDISKQLESNPDNSIVMV 191
+KRQ++S+Q + +I V
Sbjct: 182 GAYVKRQEVSEQNYRDFSQTIAHV 205
>gi|163868364|ref|YP_001609573.1| NADH dehydrogenase subunit J [Bartonella tribocorum CIP 105476]
gi|161018020|emb|CAK01578.1| NADH dehydrogenase I chain J [Bartonella tribocorum CIP 105476]
Length = 206
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 80/191 (41%), Positives = 118/191 (61%), Gaps = 5/191 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ + S+ +V+T RNP++SV LI AF NAA LFLL GAEF+ I LVVYVGAV V FLF+
Sbjct: 16 IMLTSAVIVITARNPVHSVLFLILAFFNAAALFLLAGAEFLGFILLVVYVGAVAVLFLFV 75
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF-----SAEGELSRLVFKG 128
+MMLD+D + R IG++ A ++ F + + + +
Sbjct: 76 VMMLDVDFAELKSGTLRYAPIGALIGVIIAIELIIVFVSSHFSPVLRTHVTQPMPDLGQR 135
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSI 188
N + +G +LYT Y + +I+G ILL++MIGAIVL LRH+ +KRQ I+KQ+ +++I
Sbjct: 136 TNTQALGDILYTDYVFYFQIAGIILLVAMIGAIVLTLRHKSGVKRQSIAKQVSRTVESAI 195
Query: 189 VMVKVKSGKGI 199
+ +V+SGKGI
Sbjct: 196 EIKQVESGKGI 206
>gi|302536177|ref|ZP_07288519.1| NADH dehydrogenase subunit J [Streptomyces sp. C]
gi|302445072|gb|EFL16888.1| NADH dehydrogenase subunit J [Streptomyces sp. C]
Length = 270
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/196 (20%), Positives = 93/196 (47%), Gaps = 2/196 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ +A+I + + ++ ++S L + A +L GA F+ ++ +VVY
Sbjct: 15 EAVQFWVLGTVAVIGALCTILMKKAVHSALCLAGTMIVLAVFYLANGAYFLGVVQVVVYT 74
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GA+++ FLF++M++ + + +G + L +++ A
Sbjct: 75 GAIMMLFLFVVMLVGVTAADSLKETIKGQRWLAALCGLGFGILLIAGIGNAGLTHFNGLG 134
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
V +VE + ++++T+Y + EI+G +L+ + +GA+VL R R + R ++L
Sbjct: 135 KVNSAGHVEGLAELIFTRYIFAFEITGALLITAAVGAMVLTHRERTE--RAATQRELAEK 192
Query: 184 PDNSIVMVKVKSGKGI 199
V + G+
Sbjct: 193 RVREGVQLPPLPAPGV 208
>gi|84624715|ref|YP_452087.1| NADH dehydrogenase subunit J [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188577687|ref|YP_001914616.1| NADH dehydrogenase subunit J [Xanthomonas oryzae pv. oryzae PXO99A]
gi|84368655|dbj|BAE69813.1| NADH-ubiquinone oxidoreductase NQO10 subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|188522139|gb|ACD60084.1| NADH-ubiquinone oxidoreductase Nqo10 subunit [Xanthomonas oryzae
pv. oryzae PXO99A]
Length = 220
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +L FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 2 MDWVTLAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 61
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 62 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIMAVAMLAQMVTLIGVKARSATPF 121
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 122 PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 181
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q + + MVK+ K +
Sbjct: 182 GEQSRVKAGDRLRMVKMAVEKPV 204
>gi|117927485|ref|YP_872036.1| NADH dehydrogenase subunit J [Acidothermus cellulolyticus 11B]
gi|117647948|gb|ABK52050.1| NADH dehydrogenase subunit J [Acidothermus cellulolyticus 11B]
Length = 275
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/206 (19%), Positives = 90/206 (43%), Gaps = 12/206 (5%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++ F++ +A++++ VV R+ +++ L + A + A +A + ++VY
Sbjct: 15 EAALFWVLGPIAVLAALGVVFARHTVHAALLLGGVMLIFAIFYAAQDAPLIAFVQIIVYT 74
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI----------GILAAELIVCASNFM 113
GAV++ FLF++M++ +D + RG + L I ++
Sbjct: 75 GAVMMLFLFVLMLIGVDTKERLVETLRGQRLATVFAGIGFLLLLLAGLGNAAIGTSAGLH 134
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ V G N+ + K+L+T+Y + E++ +L+ + +GA+VL R R +R
Sbjct: 135 QANYPTNAVGQVQTGGNIYQVAKLLFTRYVFAFEVTSALLITAALGAMVLAHRQRVGRRR 194
Query: 174 QDISKQLESNPDNSIVMVKVKSGKGI 199
++ + G G+
Sbjct: 195 TQY--EMMRDRFRRGAHPTPLPGPGV 218
>gi|253807608|gb|ACT36186.1| NADH dehydrogenase subunit 6 [Helicosporidium sp. ex Simulium
jonesi]
Length = 207
Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats.
Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 18/206 (8%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L FY+F+ ++S V+ RNP+YSV LI F NA+GL +LLG +F AMI LVVYVG
Sbjct: 2 DLLFYIFASSLLLSGVFVIQSRNPVYSVLFLILGFFNASGLLVLLGLDFFAMIFLVVYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF--------- 115
A+ V FLF++MML+I +E +K R +G L ++ +N +
Sbjct: 62 AIAVLFLFVVMMLNIKVEEFHEKKLRYLPVGGILGFLFLFEVLILTNHDIISLVPYELNT 121
Query: 116 ---------SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ + S N + +G ++YT Y Y ++ ILL++MIGAIVL ++
Sbjct: 122 SYLKDLFNQTNFIDWSSHYSTSNTIHALGNIIYTYYFYFFLMASLILLVAMIGAIVLTMQ 181
Query: 167 HRRDIKRQDISKQLESNPDNSIVMVK 192
+K+Q + Q + +I +
Sbjct: 182 KNLQVKKQQVYLQNTRDFTKTIRKIN 207
>gi|325924684|ref|ZP_08186122.1| NADH dehydrogenase subunit J [Xanthomonas perforans 91-118]
gi|325544890|gb|EGD16235.1| NADH dehydrogenase subunit J [Xanthomonas perforans 91-118]
Length = 220
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 64/203 (31%), Positives = 107/203 (52%), Gaps = 4/203 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +L FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 2 MDWVTLAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 61
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 62 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKARSATPF 121
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 122 PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 181
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+Q + + MVK+ K +
Sbjct: 182 GEQSRVKAGDRLRMVKMAVEKPV 204
>gi|319407258|emb|CBI80897.1| NADH dehydrogenase I chain J [Bartonella sp. 1-1C]
Length = 206
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 85/190 (44%), Positives = 120/190 (63%), Gaps = 5/190 (2%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
+IS+ +VV RNP++SV LI AF NAA LFLL GAEF+ +I LVVYVGA+ V FLF++
Sbjct: 17 MLISAVIVVAARNPVHSVLFLILAFFNAAALFLLAGAEFLGLILLVVYVGAIAVLFLFVV 76
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF-----SAEGELSRLVFKGN 129
MMLD+D + R + FIGI+ A ++ F + + + +
Sbjct: 77 MMLDVDFAELKSGTLRYAPIAAFIGIIIAIELIFVFISDSFSPVSGVHTTQPTPDLTQRT 136
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIV 189
N + +G +LYT Y + +ISG ILL++MIGAIVL LRHR +KRQ I+ Q+ P+++I
Sbjct: 137 NTQALGDILYTDYVFYFQISGLILLVAMIGAIVLTLRHRSGVKRQSIAVQVARTPESAIE 196
Query: 190 MVKVKSGKGI 199
+ KV+SGKGI
Sbjct: 197 IKKVESGKGI 206
>gi|91208862|ref|YP_539023.1| NADH dehydrogenase subunit 6 [Physcomitrella patens]
gi|90991402|dbj|BAE93094.1| NADH dehydrogenase subunit 6 [Physcomitrella patens]
Length = 201
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F +FS +A++SS +V+ +NP++SV I F N +GL +LLG +F AMI LVVYVGA
Sbjct: 2 ILFSVFSSIALVSSVMVIRAKNPVHSVLFFILVFFNTSGLLVLLGLDFFAMIFLVVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMV 114
+ V FLF++MML+I I R IG++ I
Sbjct: 62 IAVLFLFVVMMLNIKIAEIHENVLRYLPVGGIIGVIFLLEIFFIVDNDYIPILPTKLSTT 121
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + + N+E +G +LYT Y +S ILL++MIGAIVL + +KRQ
Sbjct: 122 YLTYTVYAEKIQSWTNLETLGNLLYTTYFVLFLVSSLILLVAMIGAIVLTMHKTTQVKRQ 181
Query: 175 DISKQLESNPDNSIVMVK 192
D+ +Q + N+I ++
Sbjct: 182 DVFRQNAIDFKNTIKKIR 199
>gi|271962164|ref|YP_003336360.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J)-like protein
[Streptosporangium roseum DSM 43021]
gi|270505339|gb|ACZ83617.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J)-like protein
[Streptosporangium roseum DSM 43021]
Length = 270
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 95/173 (54%), Gaps = 2/173 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ F++ + +++ ++ +V R +YS L ++ A L+ + A F+A + ++V
Sbjct: 1 MGETITFWVLAVVSVSAALGLVFSRKAVYSALMLGVVMLSLAVLYAVQDAPFLAAVQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVA--EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
Y GAV++ FLF++M++ +D + E K + F + AA L + A N + A+G
Sbjct: 61 YTGAVMMLFLFVLMLVGVDSADSLVETIKGQRFWATIAGLGFAALLALGAGNMVFAPAKG 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ G NV + ++++T++ + E++ +L+ + +GA+VL R R K
Sbjct: 121 VGGAVQEAGGNVPALAQLIFTRHVFAFEVTSALLITAALGAMVLAHRERVRPK 173
>gi|254819281|ref|ZP_05224282.1| NADH dehydrogenase subunit J [Mycobacterium intracellulare ATCC
13950]
Length = 274
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 42/198 (21%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + VV N +YS L + A +++ A F+ ++ +VV
Sbjct: 27 TGEAVTFWVLGALAVIGALGVVLAVNAVYSAMFLAMTMIILAVFYMIQDALFLGVVQVVV 86
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + + +++ A+ V +
Sbjct: 87 YTGAVMMLFLFVLMLIGVDSAESLRETLRGQRVAAVAAGVGFGILLIAAIGDVATGGFAG 146
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NVE + +++++Y + E++ +L+ + +GA+VL R R + ++ ++L
Sbjct: 147 LTTANAAGNVEGLAALIFSRYLWAFELTSALLITAAVGAMVLAHRERFERRK--TQRELS 204
Query: 182 SNPDNSIVMVKVKSGKGI 199
G G+
Sbjct: 205 QERFQPGGHPTPLPGPGV 222
>gi|164421001|ref|YP_001648496.1| NADH dehydrogenase subunit 6 [Topsentia ophiraphidites]
gi|158938931|gb|ABW83858.1| NADH dehydrogenase subunit 6 [Topsentia ophiraphidites]
Length = 188
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 72/182 (39%), Positives = 104/182 (57%), Gaps = 5/182 (2%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+F IIS +V++ NP++SV LI AF +AA LF+LL +F+A+I L+VYVGA+
Sbjct: 4 LFYLFAFNVIISGIMVISALNPVHSVLWLIVAFTSAAALFILLEVDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV-----FSAEGEL 121
+ FLF+IMML++ F IG++ ++ + M +
Sbjct: 64 AILFLFVIMMLNLTDLGGGGDMSNYLPAGFIIGVVFLFEVLIFQSRMATFNLSYINYPHN 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ K N+E +G+VLYT Y Y ++ FILL++MIGAIVL R +IKRQDI Q
Sbjct: 124 WDFIEKAPNIEVLGRVLYTNYYYLFIMASFILLVAMIGAIVLTHSTREEIKRQDIFIQTS 183
Query: 182 SN 183
Sbjct: 184 RQ 185
>gi|257054401|ref|YP_003132233.1| NADH dehydrogenase subunit J [Saccharomonospora viridis DSM 43017]
gi|256584273|gb|ACU95406.1| NADH dehydrogenase subunit J [Saccharomonospora viridis DSM 43017]
Length = 304
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 41/203 (20%), Positives = 90/203 (44%), Gaps = 6/203 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+ + +V RN ++S L+ ++ L+L A+F+ ++V
Sbjct: 27 TGEAIAFWILGPLALAGALGMVFARNAVHSALWLVLTMLSLGMLYLAQQAQFLGFTQIIV 86
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL-GSFFIGILAAELIVCASNFMVFSAEGE 120
Y GA+++ FLF++M++ + + RG + +G+ A L+ A +
Sbjct: 87 YTGAIMMLFLFVLMLVGRESSDSVVEVLRGQRLMAGLVGVGVAGLLAAALTRAIADVTPA 146
Query: 121 L--SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVL--MLRHRRDIKRQDI 176
G +G++++T Y +P E++ +L+ + + +VL RH + KR
Sbjct: 147 PLLDPWSADGGGAGGLGRLIFTDYLFPFELTAALLITAAMAGMVLSFTSRHVKGGKRSQR 206
Query: 177 SKQLESNPDNSIVMVKVKSGKGI 199
+ K G G+
Sbjct: 207 ELVIARFRGE-YERPSPKPGPGV 228
>gi|296169181|ref|ZP_06850835.1| NADH-quinone oxidoreductase subunit J [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295896160|gb|EFG75826.1| NADH-quinone oxidoreductase subunit J [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 278
Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 92/198 (46%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A++ + VV N +YS L + A +++ A F+ ++ +VV
Sbjct: 31 TGEAVAFWVLGALALVGAIGVVLSVNAVYSAMFLAMTMIILAVFYMIQDALFLGVVQVVV 90
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + G + + + +++ A+ +
Sbjct: 91 YTGAVMMLFLFVLMLIGVDSAESLKETLHGQRIAAVLAGVGFGVLLIAAIGSGATGGFAG 150
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NVE + +++++Y + E++ +L+ + IGA+VL R R + ++ ++L
Sbjct: 151 LTAANANGNVEGLAALIFSRYVWAFELTSALLITAAIGAMVLAHRERFERRK--TQRELS 208
Query: 182 SNPDNSIVMVKVKSGKGI 199
G+
Sbjct: 209 QERFQPGGHPTPMPSPGV 226
>gi|256380656|ref|YP_003104316.1| NADH dehydrogenase subunit J [Actinosynnema mirum DSM 43827]
gi|255924959|gb|ACU40470.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Actinosynnema
mirum DSM 43827]
Length = 277
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 44/202 (21%), Positives = 93/202 (46%), Gaps = 7/202 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ F++ +A+ + ++ RN ++S L+ ++ GL+++ A F+ + ++V
Sbjct: 21 TGEAAAFWVLGPLALAGALGMLFARNAVHSALWLVMTMLSLGGLYMVQQAPFLGFVQIIV 80
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF---FIGILAAELIVCASNFMVFSAE 118
Y GA+++ FLF++M++ D + RG + +G + A
Sbjct: 81 YTGAIMMLFLFVLMLVGRDSSDSVVEVLRGQRLAAAVLGLGFGGLVVGALARALTEVQPV 140
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR-RDIKRQDIS 177
G + G NV NIG ++T Y +P E++ +L+ + +GA+VL + R+ K+
Sbjct: 141 GLVEANTTGGGNVANIGARIFTDYLFPFELTSALLITAAVGAMVLAFTSKIRETKKSQRE 200
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
+E + G G+
Sbjct: 201 LVVERFRGDR---PGSLPGPGV 219
>gi|282860728|ref|ZP_06269794.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
sp. ACTE]
gi|282564464|gb|EFB70000.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
sp. ACTE]
Length = 288
Score = 115 bits (288), Expect = 4e-24, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 5/198 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F+L +A+I + V ++ ++S SL + A +L GA F+ ++ +VVY
Sbjct: 16 EAVQFWLLGTVAVIGALSTVLMKKAVHSALSLAGTMIVLAVFYLANGAYFLGIVQIVVYT 75
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRG--FLGSFFIGILAAELIVCASNFMVFSAEGEL 121
GA+++ FLF++M++ + + +G +L + LI + S G
Sbjct: 76 GAIMMLFLFVVMLVGVTAADSLKETIKGQRWLAAGCGLGFGVLLIAGIGQASLRSYNGLG 135
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ G NVE + +++T+Y + EI+G +L+ + +GA++L R R + R ++L
Sbjct: 136 AANALHGGNVEGLANLIFTKYVFAFEITGALLITATVGAMLLTHRERTE--RAKTQRELS 193
Query: 182 SNPDNSIVMVKVKSGKGI 199
S + G+
Sbjct: 194 QERVRSSHLP-PLPAPGV 210
>gi|121602205|ref|YP_989079.1| NADH dehydrogenase subunit J [Bartonella bacilliformis KC583]
gi|120614382|gb|ABM44983.1| NADH dehydrogenase (quinone), J subunit [Bartonella bacilliformis
KC583]
Length = 206
Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 128/202 (63%), Gaps = 5/202 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + FFYLFSF+ ++S+ +V+ RNP++SV LI AF NAA LFLL GAEF+ ++ LVVY
Sbjct: 5 LAAAFFYLFSFIMLMSAIIVIAARNPVHSVLFLILAFFNAAALFLLAGAEFLGLLLLVVY 64
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA-----SNFMVFSA 117
VGAV V FLF++MMLD+D + + +GI+ A ++ + ++ +
Sbjct: 65 VGAVAVLFLFVVMMLDVDFAELKRNAFQYVPVGALVGIIIAVELIIVFFSNDFSLILGTH 124
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + N + +G +LYT Y + +I+G ILL++MIGAIVL LRH+ +KRQ I
Sbjct: 125 TTQPMPSLEHRTNTQALGDILYTDYVFYFQIAGMILLVAMIGAIVLTLRHKAGVKRQSIG 184
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
Q+ NP+ +I + KV+SGKGI
Sbjct: 185 IQVARNPETAIEIKKVESGKGI 206
>gi|118602284|ref|YP_903499.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
gi|118567223|gb|ABL02028.1| NADH dehydrogenase subunit J [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 202
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 2/200 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY+ SF I+SS ++ RN +V L+ AF NAA +++LL AEF+A+ ++
Sbjct: 1 MNSEQIIFYILSFWFIVSSLAMIFSRNAAKAVLFLVLAFFNAASIWILLEAEFLAITLIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF+I ML+ID + + + + F +
Sbjct: 61 VYVGAVMVLFLFVIKMLNIDKSTLRAKFTGYLPLGLIVAAIIVAEMSLVLGANQFGLDVF 120
Query: 121 LSRL--VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
S +N+ + LYT Y YP E++ +LL+++I AI L+ R+ K+Q IS+
Sbjct: 121 SSPERHGMDYSNITVLAMQLYTTYVYPFELAAVLLLIAIIAAITLVYRNETSRKKQSISE 180
Query: 179 QLESNPDNSIVMVKVKSGKG 198
Q+ + + +V + KG
Sbjct: 181 QVNVQAKDRVRLVSITPSKG 200
>gi|319404250|emb|CBI77843.1| NADH dehydrogenase I chain J [Bartonella rochalimae ATCC BAA-1498]
Length = 206
Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats.
Identities = 85/190 (44%), Positives = 119/190 (62%), Gaps = 5/190 (2%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
+IS+ +VV RNP++SV LI AF NAA LFLL GAEF+ +I LVVYVGAV V FLF++
Sbjct: 17 MLISAVIVVVARNPVHSVLFLILAFFNAAALFLLAGAEFLGLILLVVYVGAVAVLFLFVV 76
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----AEGELSRLVFKGN 129
MMLD+D + + FIGI+ A ++ F + + + +
Sbjct: 77 MMLDVDFAELKSGTLKYAPIGAFIGIIIAIELIFVFISNSFFPVSGVHATQPTPDLTQRT 136
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIV 189
N + +G +LYT Y + +ISG ILL++MIGAIVL LRHR +KRQ I+ Q+ P+++I
Sbjct: 137 NTQALGDILYTDYVFYFQISGLILLVAMIGAIVLTLRHRSGVKRQSIAVQVARTPESAIE 196
Query: 190 MVKVKSGKGI 199
+ KV+SGKGI
Sbjct: 197 IKKVESGKGI 206
>gi|155029063|emb|CAO85827.1| NADH dehydrogenase subunit 6 [Helianthus annuus]
Length = 309
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S +VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V
Sbjct: 5 VLSSLALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 MVYAGKVRSWTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDSRRTI 194
>gi|317097445|ref|YP_004123644.1| NADH dehydrogenase subunit 6 [Oscarella tuberculata]
gi|317134139|ref|YP_004123302.1| NADH dehydrogenase subunit 6 [Oscarella lobularis]
gi|308912624|gb|ADO51389.1| NADH dehydrogenase subunit 6 [Oscarella tuberculata]
gi|308912746|gb|ADO51503.1| NADH dehydrogenase subunit 6 [Oscarella lobularis]
Length = 197
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ IIS +V++ NPI+SVF LI F+ A+ LF+LLG +F+A+I L+VYVGA+
Sbjct: 4 LFYIFALGVIISGIMVISALNPIHSVFWLIVVFLGASALFILLGIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE-------- 118
+ FLF+IMML++ IG+L ++
Sbjct: 64 AILFLFVIMMLNLTDLEGGGDMSNYIPIGSGIGVLLLFEVLIMGREATAYNYRDIDHECL 123
Query: 119 ------GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ S + K +N+E +G++LYT Y Y I+ FILL++MIGAIVL ++K
Sbjct: 124 KGGVDAWDASIEIIKSSNIEVLGRILYTDYYYLFIIASFILLVAMIGAIVLTHELGAELK 183
Query: 173 RQDISKQLES 182
RQD+ Q
Sbjct: 184 RQDLFTQTSR 193
>gi|262186704|ref|YP_003275963.1| NADH dehydrogenase subunit 6 [Pleurozia purpurea]
gi|237780701|gb|ACR19347.1| NADH dehydrogenase subunit 6 [Pleurozia purpurea]
Length = 199
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 66/198 (33%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ FY+F +A++S +V+ +NP++SV LI F N +GL +LLG +F AMI LVVYVGA
Sbjct: 2 ILFYVFVVLALVSGAMVIRAKNPVHSVLFLISVFRNTSGLLVLLGPDFFAMIFLVVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMV 114
+ V F F++MML IE R IG++ I +
Sbjct: 62 IAVSFSFVVMMLHTRIEEIHENVLRYLPVGGIIGLIFLLEIFLMVDNDYIPILSTKSGAT 121
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + + N E +G +LYT Y + +S I L+++IGAIVL + +KRQ
Sbjct: 122 YLTYTVYAEKIHSWTNSETLGNLLYTTYFFLFLVSSLISLVALIGAIVLTMHKTTRVKRQ 181
Query: 175 DISKQLESNPDNSIVMVK 192
D+ Q + N+I V+
Sbjct: 182 DVFIQNAIDFRNTIRKVR 199
>gi|114151579|ref|YP_740380.1| NADH dehydrogenase subunit 6 [Zea perennis]
gi|102567913|gb|ABF70830.1| NADH dehydrogenase subunit 6 [Zea perennis]
Length = 209
Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 11/183 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLGLDFSAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL----- 124
FLF++MM +I I R S IG++ + +
Sbjct: 65 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLKY 124
Query: 125 ------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
V N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLE 181
+
Sbjct: 185 RNA 187
>gi|332285008|ref|YP_004416919.1| NADH-ubiquinone oxidoreductase, chain J [Pusillimonas sp. T7-7]
gi|330428961|gb|AEC20295.1| NADH-ubiquinone oxidoreductase, chain J [Pusillimonas sp. T7-7]
Length = 212
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 111/195 (56%), Gaps = 1/195 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ ++ FY+ + + ++++F V+T +P+ V LI F A+ +++L GAEF++++ ++
Sbjct: 1 MIFSTILFYVLALVLVVAAFRVITANSPVTGVLHLILTFFTASMIWMLQGAEFLSLLLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLD+ ++ K IG++ + + G
Sbjct: 61 VYVGAVMVLFLFVVMMLDVRMDALRAGMKTYLPMGLIIGLIMVLEMAFVL-AKSWLGAGP 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ + +N +G +YT Y + ++I G ILL+ MI AI L LR R D+KR + S+Q+
Sbjct: 120 AAVIADDVDNTHALGVAMYTDYVFAVQIGGVILLVGMIAAIALTLRKRADVKRTNPSEQV 179
Query: 181 ESNPDNSIVMVKVKS 195
+ + + MV + S
Sbjct: 180 KVKAQDRLRMVSIPS 194
>gi|11467107|ref|NP_054408.1| NADH dehydrogenase subunit 6 [Marchantia polymorpha]
gi|585594|sp|P26850|NU6M_MARPO RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|404360|gb|AAB27401.1| NADH dehydrogenase subunit 6=nad6 gene product [Marchantia
polymorpha=liverworts, Peptide Mitochondrial, 199 aa]
gi|786192|gb|AAC09405.1| nad6 [Marchantia polymorpha]
Length = 199
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 11/198 (5%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ FY+F +A++S +V+ +NP++SV LI F N +GL +LLG +F AMI LVVYVGA
Sbjct: 2 ILFYVFVVLALVSGAMVIRAKNPVHSVLFLILVFCNTSGLLVLLGLDFFAMIFLVVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMV 114
+ V FLF++MML I IE R IG++ I
Sbjct: 62 IAVLFLFVVMMLHIRIEEIHENVLRYLPVGGIIGLIFLLEIFLMVDNDYIPILPTKLSAT 121
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + + N+E +G +LYT Y + +S ILL+++IGAIVL + +KRQ
Sbjct: 122 YLTYTVYAGKIHSWTNLETLGNLLYTTYFFLFLVSSLILLVALIGAIVLTMHKTTKVKRQ 181
Query: 175 DISKQLESNPDNSIVMVK 192
D+ Q + N+I V+
Sbjct: 182 DVFIQNAIDFQNTIKKVR 199
>gi|316996025|dbj|BAD83537.2| NADH dehydrogenase subunit 6 [Nicotiana tabacum]
Length = 228
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV LI F N +GL LLLG +F AMI VVY+GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFLIPVFRNTSGLLLLLGLDFFAMIFPVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG+L +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLLFWWEMFFILDNESIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNALDSRRTI 194
>gi|57014000|ref|YP_173471.1| NADH dehydrogenase subunit 6 [Nicotiana tabacum]
Length = 228
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV LI F N +GL LLLG +F AMI VVY+GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFLIPVFRNTSGLLLLLGLDFFAMIFPVVYIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG+L +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLLFWWEMFFILDNESIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNALDSRRTI 194
>gi|291298807|ref|YP_003510085.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Stackebrandtia nassauensis DSM 44728]
gi|290568027|gb|ADD40992.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Stackebrandtia nassauensis DSM 44728]
Length = 256
Score = 113 bits (284), Expect = 9e-24, Method: Composition-based stats.
Identities = 41/204 (20%), Positives = 91/204 (44%), Gaps = 12/204 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ + + + + +V R+ ++S L + +++L F+ + ++V
Sbjct: 14 TGEAITFWILAPIILGGAIGMVLARSAVHSALLLACTMLGLGVIYMLQSGPFIGFVQIIV 73
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL-GSFFIGILAAELIVCASNFMVFSAEGE 120
Y GA+++ FLF+IM++ D + + RG + +GI A L+ V +
Sbjct: 74 YTGAIMMLFLFVIMLVGRDSKDSLLETLRGQRIAAIGLGIGMALLLCTGLARGVGAVSAV 133
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
NV+ I L+T+Y + E++ +L+ + +GA+VL + +L
Sbjct: 134 GLDEANANGNVKGIAAELFTKYVFAFEVTSALLITAAVGAMVLAHVEKAK------EDKL 187
Query: 181 ESNPDNSIVMVK-----VKSGKGI 199
+ + K K+G G+
Sbjct: 188 GQKKSSRLRFAKGNYPGPKAGPGV 211
>gi|325003715|ref|ZP_08124827.1| NADH:ubiquinone oxidoreductase subunit J [Pseudonocardia sp. P1]
Length = 284
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+ + +V R+ +++ L+ + A L+++ A F+ + ++V
Sbjct: 17 TGEAITFWILGPVALAGALGLVFARHAVHAALLLVLTMFSIAVLYIVQSAPFLGFVQIIV 76
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS---FFIGILAAELIVCASNFMVFSAE 118
Y GAV++ FLF++M++ D + + RG + F +G+ A + + +
Sbjct: 77 YTGAVMMLFLFVLMLVGKDSKDSVIEVLRGQRAAALVFGVGLAALLVAGISRGLTEVTPA 136
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
G + + NV +G++++T Y E+S +L+++ +G +VL + +
Sbjct: 137 GLQAGGMGGSANVAGLGRLIFTDYLLAFELSAALLMVAALGGMVLTGSQSSQHAKLSQRE 196
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
+ + G G+
Sbjct: 197 TVLRRLRGQHARISPLPGPGV 217
>gi|269469177|gb|EEZ80719.1| NADH dehydrogenase I chain J [uncultured SUP05 cluster bacterium]
Length = 203
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 105/197 (53%), Gaps = 2/197 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY+FSF + SS ++ RN +V LI +F +AA +++LL AEF+A+ ++
Sbjct: 1 MEFEQILFYVFSFWFVASSLAMIFSRNAAKAVLFLILSFFSAASIWILLEAEFLAITLIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF+I ML+ID + + + +V F +
Sbjct: 61 VYVGAVMVLFLFVIKMLNIDKSTLRAKFAGYLPLGLMVAAVIIAEMVLVLGSAQFGLDVV 120
Query: 121 LSRL--VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + +N+ + LYT Y YP E++ +LL+++I AI L+ R+ + K+Q I +
Sbjct: 121 AAPVRHGADYSNITVLAMQLYTTYVYPFELAAVLLLIAIIAAITLVHRNEINRKKQSIPE 180
Query: 179 QLESNPDNSIVMVKVKS 195
Q+ + + +V + S
Sbjct: 181 QVNVQAKDRVRLVSIAS 197
>gi|317097065|ref|YP_004123207.1| NADH dehydrogenase subunit 6 [Oscarella viridis]
gi|308912700|gb|ADO51460.1| NADH dehydrogenase subunit 6 [Oscarella viridis]
Length = 197
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ IIS +V++ NPI+SVF LI F+ A+ LF+LLG +F+A+I L+VYVGA+
Sbjct: 4 LFYIFALGVIISGIMVISALNPIHSVFWLIVVFLGASALFILLGIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS---------- 116
+ FLF+IMML++ IG+L ++
Sbjct: 64 AILFLFVIMMLNLTDLEGGGDMSNYIPIGSVIGVLLLFEVLIMGREATAYSYRDIDHECL 123
Query: 117 ----AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ S + K +N+E +G++LYT Y Y I+ FILL++MIGAIVL ++K
Sbjct: 124 RGGVDAWDASIEIIKSSNIEVLGRILYTDYYYLFIIASFILLVAMIGAIVLTHELGTELK 183
Query: 173 RQDISKQLES 182
RQD+ Q
Sbjct: 184 RQDLFTQTSR 193
>gi|240169661|ref|ZP_04748320.1| NADH dehydrogenase subunit J [Mycobacterium kansasii ATCC 12478]
Length = 264
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 90/198 (45%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + VV N +YS L + A +++ A F+ ++ +VV
Sbjct: 23 TGEAVTFWILGALALIGALAVVLAVNAVYSAMFLAMTMIILAVFYMVQDALFLGVVQVVV 82
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + + +++ V +
Sbjct: 83 YTGAVMMLFLFVLMLIGVDSAESLKETLRGQRVAAVGTGIGFGILLVGGIGNVATGGFAG 142
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NVE + +++ +Y + E++ +L+ + IGA+VL R R + ++ ++L
Sbjct: 143 LTAANANGNVEGLAALIFFRYLWAFELTSALLITAAIGAMVLAHRERFERRK--TQRELS 200
Query: 182 SNPDNSIVMVKVKSGKGI 199
G+
Sbjct: 201 EERFRPGGHPTPMPNPGV 218
>gi|15610290|ref|NP_217670.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis H37Rv]
gi|15842730|ref|NP_337767.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis CDC1551]
gi|31794330|ref|NP_856823.1| NADH dehydrogenase subunit J [Mycobacterium bovis AF2122/97]
gi|121639037|ref|YP_979261.1| NADH dehydrogenase subunit J [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663009|ref|YP_001284532.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis H37Ra]
gi|148824348|ref|YP_001289102.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis F11]
gi|215405152|ref|ZP_03417333.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis 02_1987]
gi|215413021|ref|ZP_03421722.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis 94_M4241A]
gi|215428610|ref|ZP_03426529.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis T92]
gi|215432113|ref|ZP_03430032.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis EAS054]
gi|215447443|ref|ZP_03434195.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis T85]
gi|218754933|ref|ZP_03533729.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis GM 1503]
gi|224991529|ref|YP_002646218.1| NADH dehydrogenase subunit J [Mycobacterium bovis BCG str. Tokyo
172]
gi|253800188|ref|YP_003033189.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis KZN
1435]
gi|254365779|ref|ZP_04981824.1| NADH dehydrogenase I (chain J) nuoJ (NADH-ubiquinone oxidoreductase
chain J) [Mycobacterium tuberculosis str. Haarlem]
gi|254552244|ref|ZP_05142691.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260188195|ref|ZP_05765669.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis CPHL_A]
gi|260202301|ref|ZP_05769792.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis T46]
gi|260206493|ref|ZP_05773984.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis K85]
gi|289444719|ref|ZP_06434463.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
T46]
gi|289448834|ref|ZP_06438578.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
CPHL_A]
gi|289555427|ref|ZP_06444637.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis KZN
605]
gi|289575866|ref|ZP_06456093.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
K85]
gi|289746963|ref|ZP_06506341.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
02_1987]
gi|289751832|ref|ZP_06511210.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
T92]
gi|289755273|ref|ZP_06514651.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis EAS054]
gi|289759284|ref|ZP_06518662.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis T85]
gi|289763337|ref|ZP_06522715.1| NADH dehydrogenase I (chain J) nuoJ (NADH-ubiquinone oxidoreductase
chain J) [Mycobacterium tuberculosis GM 1503]
gi|294995505|ref|ZP_06801196.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis 210]
gi|297635797|ref|ZP_06953577.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis KZN 4207]
gi|297732794|ref|ZP_06961912.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis KZN R506]
gi|298526628|ref|ZP_07014037.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis 94_M4241A]
gi|306777471|ref|ZP_07415808.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu001]
gi|306782196|ref|ZP_07420533.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu002]
gi|306786017|ref|ZP_07424339.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu003]
gi|306790382|ref|ZP_07428704.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu004]
gi|306794907|ref|ZP_07433209.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu005]
gi|306799107|ref|ZP_07437409.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu006]
gi|306804950|ref|ZP_07441618.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu008]
gi|306809139|ref|ZP_07445807.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu007]
gi|306969241|ref|ZP_07481902.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu009]
gi|306973588|ref|ZP_07486249.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu010]
gi|307085900|ref|ZP_07495013.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu012]
gi|313660127|ref|ZP_07817007.1| NADH:ubiquinone oxidoreductase subunit J [Mycobacterium
tuberculosis KZN V2475]
gi|1781214|emb|CAB06285.1| PROBABLE NADH DEHYDROGENASE I (CHAIN J) NUOJ (NADH-UBIQUINONE
OXIDOREDUCTASE CHAIN J) [Mycobacterium tuberculosis
H37Rv]
gi|13883052|gb|AAK47581.1| NADH dehydrogenase I, J subunit [Mycobacterium tuberculosis
CDC1551]
gi|31619926|emb|CAD95270.1| PROBABLE NADH DEHYDROGENASE I (CHAIN J) NUOJ (NADH-UBIQUINONE
OXIDOREDUCTASE CHAIN J) [Mycobacterium bovis AF2122/97]
gi|121494685|emb|CAL73166.1| Probable NADH dehydrogenase I (chain J) nuoJ [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|134151292|gb|EBA43337.1| NADH dehydrogenase I (chain J) nuoJ (NADH-ubiquinone oxidoreductase
chain J) [Mycobacterium tuberculosis str. Haarlem]
gi|148507161|gb|ABQ74970.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis H37Ra]
gi|148722875|gb|ABR07500.1| NADH dehydrogenase I chain J nuoJ (NADH-ubiquinone oxidoreductase
chain J) [Mycobacterium tuberculosis F11]
gi|224774644|dbj|BAH27450.1| NADH dehydrogenase subunit J [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321691|gb|ACT26294.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis KZN
1435]
gi|289417638|gb|EFD14878.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
T46]
gi|289421792|gb|EFD18993.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
CPHL_A]
gi|289440059|gb|EFD22552.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis KZN
605]
gi|289540297|gb|EFD44875.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
K85]
gi|289687491|gb|EFD54979.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
02_1987]
gi|289692419|gb|EFD59848.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
T92]
gi|289695860|gb|EFD63289.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis EAS054]
gi|289710843|gb|EFD74859.1| NADH dehydrogenase I (chain J) nuoJ (NADH-ubiquinone oxidoreductase
chain J) [Mycobacterium tuberculosis GM 1503]
gi|289714848|gb|EFD78860.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis T85]
gi|298496422|gb|EFI31716.1| NADH dehydrogenase subunit J [Mycobacterium tuberculosis 94_M4241A]
gi|308214183|gb|EFO73582.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu001]
gi|308324957|gb|EFP13808.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu002]
gi|308329374|gb|EFP18225.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu003]
gi|308333203|gb|EFP22054.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu004]
gi|308336693|gb|EFP25544.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu005]
gi|308340534|gb|EFP29385.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu006]
gi|308344473|gb|EFP33324.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu007]
gi|308348469|gb|EFP37320.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu008]
gi|308353099|gb|EFP41950.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu009]
gi|308357072|gb|EFP45923.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu010]
gi|308364635|gb|EFP53486.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
SUMu012]
gi|323718243|gb|EGB27423.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
CDC1551A]
gi|328459925|gb|AEB05348.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis KZN
4207]
Length = 262
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ S +A++ + VV N +YS L + A ++ A F+ ++ +VV
Sbjct: 15 TGEAVMFWVLSALALLGAVGVVLAVNAVYSAMFLAMTMIILAVFYMAQDALFLGVVQVVV 74
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + + + +++ ++ V +
Sbjct: 75 YTGAVMMLFLFVLMLIGVDSAESLKETLRGQRVAAVLTGVGFGVLLISTIGQVATRGFAG 134
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ NVE + +++++Y + E++ +L+ + +GA+VL R R + ++ ++L
Sbjct: 135 LTVANANGNVEGLAALIFSRYLWAFELTSALLITAAVGAMVLAHRERFERRK--TQRELS 192
Query: 182 SNPDNSIVMVKVKSGKGI 199
G+
Sbjct: 193 QERFRPGGHPTPLPNPGV 210
>gi|126695328|ref|YP_001090215.1| NADH dehydrogenase subunit 6 [Oscarella carmela]
gi|317097411|ref|YP_004123616.1| NADH dehydrogenase subunit 6 [Oscarella malakhovi]
gi|116876184|gb|ABK30948.1| NADH dehydrogenase subunit 6 [Oscarella carmela]
gi|312162788|gb|ADO51545.1| NADH dehydrogenase subunit 6 [Oscarella malakhovi]
Length = 197
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 14/190 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ IIS +V++ NPI+SVF LI F+ A+ LF+LLG +F+A+I L+VYVGA+
Sbjct: 4 LFYIFALGIIISGIMVISALNPIHSVFWLIVVFLGASALFILLGIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE-------- 118
+ FLF+IMML++ IG+L ++
Sbjct: 64 AILFLFVIMMLNLTDLEGGGDMSNYIPIGSIIGVLLLFEVLIMGREATGYNYRDIDHECL 123
Query: 119 ------GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ S + K +N+E +G++LYT Y Y I+ FILL++MIGAIVL ++K
Sbjct: 124 RGGVNAWDASIEIIKSSNIEVLGRILYTDYYYLFIIASFILLVAMIGAIVLTHELGAELK 183
Query: 173 RQDISKQLES 182
RQD+ Q
Sbjct: 184 RQDLFTQTSR 193
>gi|317134283|ref|YP_004123166.1| NADH dehydrogenase subunit 6 [Pseudocorticium jarrei]
gi|308912684|gb|ADO51445.1| NADH dehydrogenase subunit 6 [Pseudocorticium jarrei]
Length = 197
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 67/190 (35%), Positives = 101/190 (53%), Gaps = 14/190 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+ + IIS +V++ NPI+SVF LI F A+ LF+LLG +F+A+I L+VYVGA+
Sbjct: 4 LFYILALGVIISGIMVISALNPIHSVFWLIVVFSGASALFILLGIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS---------- 116
+ FLF+IMML++ + IG+L ++
Sbjct: 64 AILFLFVIMMLNLTDLEGDGDMSNYIPIGSIIGVLLLFEVLIMGREATAYSYRDIDHECL 123
Query: 117 ----AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ S + K +N+E +G++LYT Y Y I+ FILL++MIGAIVL ++K
Sbjct: 124 KRGGDAWDASIEIIKTSNIEVLGRILYTDYYYLFIIASFILLVAMIGAIVLTHELGAELK 183
Query: 173 RQDISKQLES 182
RQD+ Q
Sbjct: 184 RQDLFTQTSR 193
>gi|328775205|gb|AEB39998.1| NADH dehydrogenase subunit 6 [Funaria hygrometrica]
Length = 201
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 103/198 (52%), Gaps = 11/198 (5%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F +FS +A++SS +V+ +NP++SV I F N +GL +LLG +F AMI LVVYVGA
Sbjct: 2 ILFSVFSSIALVSSVMVIRAKNPVHSVLFFILVFFNTSGLLVLLGLDFFAMIFLVVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMV 114
+ V FLF++MML+I I R IG++ I
Sbjct: 62 IAVLFLFVVMMLNIKIAEIHENVLRYLPVGGIIGVIFLLEIFFIVDNDYIPILPTKLSTT 121
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + + N+E +G +LYT Y +S ILL++MIGAIVL + +K Q
Sbjct: 122 YLTYTVYAEKIQSWTNLETLGNLLYTTYFVLFLVSSLILLVAMIGAIVLTMHKTTQVKGQ 181
Query: 175 DISKQLESNPDNSIVMVK 192
D+ +Q + N+I ++
Sbjct: 182 DVFRQNAIDFKNTIKKIR 199
>gi|67920417|ref|ZP_00513937.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Crocosphaera
watsonii WH 8501]
gi|67857901|gb|EAM53140.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Crocosphaera
watsonii WH 8501]
Length = 236
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + + II++ VV + N +YS F L F++ +G+++LL A+FVA +++Y
Sbjct: 35 VQIISFAILAGLVIITALGVVLLENIVYSAFLLGGVFISISGIYILLNADFVAAAQVLIY 94
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + G+ + + A + + ++ E +
Sbjct: 95 VGAVNVLILFAIMLVNKKQDYSSIPTPWIRRGATAL-VCAGLFALLGTMVLITPWSIESN 153
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
N V IGK ++ + P E++ +LL++M+GAIVL R
Sbjct: 154 APGLIENTVVEIGKHFFSDFLLPFELASVLLLMAMVGAIVLARR 197
>gi|254382433|ref|ZP_04997792.1| NADH dehydrogenase subunit J [Streptomyces sp. Mg1]
gi|194341337|gb|EDX22303.1| NADH dehydrogenase subunit J [Streptomyces sp. Mg1]
Length = 270
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+I + + ++ ++S SL + A +L GA F+ ++ ++V
Sbjct: 13 TGEAVQFWVLGTVAVIGALSTILMKKAVHSALSLAGTMIILAVFYLANGAYFLGVVQVIV 72
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ + + +G + L ++ A
Sbjct: 73 YTGAIMMLFLFVVMLVGVTAADSLKETLKGQRWMAVLCALGFGTLLIAGIAHARLNHFNG 132
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ G +VE + +++T+Y + EI+G +L+ + +GA+VL R R + R ++L
Sbjct: 133 LGRINSGGHVEGLATLIFTKYVFAFEITGALLITAAVGAMVLTHRERTE--RAATQRELA 190
Query: 182 SNPDNSIVMVKVKSGKGI 199
V + G+
Sbjct: 191 ERRVREGVQLPPLPAPGV 208
>gi|240850592|ref|YP_002971992.1| NADH dehydrogenase I subunit J [Bartonella grahamii as4aup]
gi|240267715|gb|ACS51303.1| NADH dehydrogenase I subunit J [Bartonella grahamii as4aup]
Length = 206
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 78/190 (41%), Positives = 118/190 (62%), Gaps = 5/190 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ + S+ +V+T RNP++SV LI AF NAA LFLL GAEF+ +I LVVYVGAV V FLF+
Sbjct: 16 IMLTSAVIVITARNPVHSVLFLILAFFNAAALFLLAGAEFLGLILLVVYVGAVAVLFLFV 75
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF-----SAEGELSRLVFKG 128
+MMLD+D + R IG++ A ++ F + + + +
Sbjct: 76 VMMLDVDFAELKSGTLRYAPIGALIGVIIAVELIVVFVSSYFSPVLRTHVTQPMPDLTQR 135
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSI 188
N + +G +LYT Y + +I+G ILL++MIGAIVL LRH+ +KRQ I++Q+ +++I
Sbjct: 136 TNTQALGDILYTDYVFYFQIAGMILLVAMIGAIVLTLRHKLGVKRQSIAEQVSRTVESAI 195
Query: 189 VMVKVKSGKG 198
+ +V+SGKG
Sbjct: 196 EIKQVESGKG 205
>gi|296140860|ref|YP_003648103.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Tsukamurella
paurometabola DSM 20162]
gi|296028994|gb|ADG79764.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Tsukamurella
paurometabola DSM 20162]
Length = 256
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 88/202 (43%), Gaps = 5/202 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ + A++ + VV +YS L + A +L GA F+ ++ +V
Sbjct: 1 MTGEEVAFWVVAVPAVLFALGVVVASKAVYSALCLAATMILLAVAYLSQGAMFLGVVQVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI---GILAAELIVCASNFMVFSA 117
VY GAV++ FLF++M++ +D + RG + + G + + A +
Sbjct: 61 VYTGAVMMLFLFVVMLVGVDSSDSLVETLRGHRVAAAVAGTGFGLLLVTLLARAVLPVPR 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ + N+VE + ++ +Y + E++ +L+ + +GA++L R +
Sbjct: 121 PVDGVAPQYPPNSVEALADTVFVRYVWAFELTAALLITATLGAMILAHREKLTAPLSQRE 180
Query: 178 KQLESNPDNSIVMVKVKSGKGI 199
+ + + G+
Sbjct: 181 QSILRFREGR--RATPLPNPGV 200
>gi|326902622|gb|EGE49555.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
W-148]
Length = 262
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/198 (20%), Positives = 95/198 (47%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ S +A++ + VV N +YS L + A ++ A F+ ++ +VV
Sbjct: 15 TGEAVMFWVLSALALLGAVGVVLAINAVYSAMFLAMTMIILAVFYMAQDALFLGVVQVVV 74
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + + + +++ ++ V +
Sbjct: 75 YTGAVMMLFLFVLMLIGVDSAESLKETLRGQRVAAVLTGVGFGVLLISTIGQVATRGFAG 134
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ NVE + +++++Y + E++ +L+ + +GA+VL R R + ++ ++L
Sbjct: 135 LTVANANGNVEGLAALIFSRYLWAFELTSALLITAAVGAMVLAHRERFERRK--TQRELS 192
Query: 182 SNPDNSIVMVKVKSGKGI 199
G+
Sbjct: 193 QERFRPGGHPTPLPNPGV 210
>gi|145225069|ref|YP_001135747.1| NADH dehydrogenase subunit J [Mycobacterium gilvum PYR-GCK]
gi|145217555|gb|ABP46959.1| NADH dehydrogenase subunit J [Mycobacterium gilvum PYR-GCK]
Length = 236
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F++ + +++ + V+ +YS SL + A L++ GA F+ ++ +VVY GA
Sbjct: 2 ILFWVMAVVSVGGALGVIAAPKAVYSAMSLAATMIALAVLYIAQGAPFLGVVQIVVYTGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V++ FLF++MM+ +D + RG + L +++ A V +
Sbjct: 62 VMMLFLFVLMMIGVDSSESLVETLRGQRIAALAVGLGFGILLIAGIGSVSATGIVGLDQA 121
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPD 185
G NVE + +++T+Y + E++G +L+ + +GA+VL R R ++ ++L
Sbjct: 122 NGGGNVEGLAALIFTKYLWAFELTGALLITAALGAMVLAHRERFQRRK--TQRELAVERF 179
Query: 186 NSIVMVKVKSGKGI 199
G+
Sbjct: 180 APGGHPTTLPNPGV 193
>gi|49475649|ref|YP_033690.1| NADH dehydrogenase subunit J [Bartonella henselae str. Houston-1]
gi|49238456|emb|CAF27684.1| NADH dehydrogenase I, J subunit [Bartonella henselae str.
Houston-1]
Length = 206
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 119/191 (62%), Gaps = 5/191 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ + S+ +V+T RNP++SV LI AF NAA LFLL GAEF+ +I LVVYVGAV V FLF+
Sbjct: 16 IMLASAVIVITARNPVHSVLFLILAFFNAAALFLLAGAEFLGLILLVVYVGAVAVLFLFV 75
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA-----SNFMVFSAEGELSRLVFKG 128
+MMLD+D + R +G + A ++ + ++ + + + +
Sbjct: 76 VMMLDVDFAELKSGTLRYAPIGALVGSIVAVELIVVFVGSRFSPVLRAHVMQPMPDLAQK 135
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSI 188
N + +G +LYT Y + +I+G ILL++MIGAI+L LRH+ +KRQ I+ Q+ +N+I
Sbjct: 136 TNTQALGDILYTDYVFYFQIAGIILLVAMIGAIILTLRHKSGVKRQSIAVQVSRKVENAI 195
Query: 189 VMVKVKSGKGI 199
+ +++SGKGI
Sbjct: 196 EIKQIESGKGI 206
>gi|33239634|ref|NP_874576.1| NADH dehydrogenase subunit J [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33237159|gb|AAP99228.1| NAD(P)H-quinone oxidoreductase chain 6 [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 200
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 56/163 (34%), Positives = 84/163 (51%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F + + + I S VV + N +YS F L F++ AGL+LLL A FVA ++VYV
Sbjct: 8 EQICFLILASVIISGSLGVVLIENIVYSAFLLGGVFMSVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ E+ + FF G + A L+ + +
Sbjct: 68 GAVNVLILFAIMLVNKREELKP--IAGLQIRRFFSGCVCAGLLALLFRVNLTTKWATPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
E IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 126 QAIGEEATERIGEHLFTDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|327195240|ref|YP_004339022.1| NADH dehydrogenase subunit 6 [Coccomyxa sp. C-169]
gi|325070736|gb|ADY75464.1| NADH dehydrogenase subunit 6 [Coccomyxa sp. C-169]
Length = 205
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 101/198 (51%), Gaps = 16/198 (8%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY FS +A+IS +V+ RNP++SV LI F N+AGL +LLG EF AMI LVVYVGA+
Sbjct: 4 LFYFFSSLALISGVMVIQARNPVHSVLFLILVFFNSAGLLVLLGLEFFAMIFLVVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--------- 117
V FLF++MML+I + ++ R +G+L I + +
Sbjct: 64 AVLFLFVVMMLNIKLAEISEKRLRYLPIGGLLGMLFLGEIFLIVDNDLIPWLGSAHLSEW 123
Query: 118 -------EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
S L +E +G ++YT Y Y ++ ILL++MIGAIVL L
Sbjct: 124 AELSAMEWTPWSHLAEGVTPLEGVGVIIYTYYFYFFLLASLILLVAMIGAIVLTLHKGVA 183
Query: 171 IKRQDISKQLESNPDNSI 188
+K Q++ Q ++
Sbjct: 184 VKHQEVFHQNSREFAKTV 201
>gi|269128604|ref|YP_003301974.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Thermomonospora curvata DSM 43183]
gi|268313562|gb|ACY99936.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thermomonospora curvata DSM 43183]
Length = 308
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/197 (23%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F+L + +++ ++ +V +R ++S L ++ A L+ + A F+A + ++VY
Sbjct: 22 EPVVFWLLAVVSVAAALGMVFLRKAVHSALMLAVVMLSLAVLYAVQDAPFLAFVQVIVYT 81
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC--ASNFMVFSAEGEL 121
GAV++ FLF++M++ + + RG I L ++V N + + G
Sbjct: 82 GAVLMLFLFVLMLVGVSSTDSLVETIRGQRIWAAIAGLGFAVLVISGLGNAALSDSMGLA 141
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ G NV+ + ++L+T+Y + E++ +L+ + +GA+VL R R K K+L
Sbjct: 142 AANAEAGGNVQGLARLLFTKYVFAFEVTSALLITAALGAMVLAHRERTSPKP--TQKELS 199
Query: 182 SNPDNSIVMVKVKSGKG 198
G G
Sbjct: 200 KRRFRPGGHPTPLPGPG 216
>gi|319787434|ref|YP_004146909.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Pseudoxanthomonas suwonensis 11-1]
gi|317465946|gb|ADV27678.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Pseudoxanthomonas suwonensis 11-1]
Length = 215
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 93/179 (51%), Gaps = 4/179 (2%)
Query: 23 VTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIE 82
++VRNP+ +V LI F + A +LL+GAEF+ + ++VYVGAV+V FLF++MMLDID+
Sbjct: 23 ISVRNPVNAVLCLILTFFSVACTWLLVGAEFLGVALILVYVGAVMVLFLFVVMMLDIDVA 82
Query: 83 VAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFSAEGELSRLVFKGNNVENIGKVL 138
R + ++ ++ + L +N + + L
Sbjct: 83 ALREGWVRFLPVGVVVAVVMLVQVLALIGVKARTATPFPADNAAALAADASNTRWLAETL 142
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKSGK 197
+TQY P E + IL +++I A+++ LR R IK Q+ ++Q + + MV + + K
Sbjct: 143 FTQYLLPFEFAAVILTVAVIAAVMITLRKRTGIKTQNPAEQSRVKAADRLRMVSMPAEK 201
>gi|317134245|ref|YP_004123489.1| NADH dehydrogenase subunit 6 [Halisarca sp. DVL-2010]
gi|315141536|gb|ADT81740.1| NADH dehydrogenase subunit 6 [Halisarca sp. DVL-2010]
Length = 191
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 71/184 (38%), Positives = 98/184 (53%), Gaps = 7/184 (3%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+ I S +V++ NP++SV LIFAF NA+ LF+LL EF+A I L+VYVGA+
Sbjct: 4 LFYLFALGVIFSGIMVISSLNPVHSVLWLIFAFTNASALFILLEVEFLAFIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDI--EVAEPRKKRGFLGSFFIGILAAELIVCASN-----FMVFSAEG 119
+ FLF+IMML++ IG + I+ N ++
Sbjct: 64 AILFLFVIMMLNLTDFGYNINSDMSNYLPAGLVIGTVFLFEILIWHNHSEGYYLSSDCVP 123
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
V N+E IG+VLYT + Y ++ FILL++MIGAIVL DI+RQDI Q
Sbjct: 124 IYYNCVISSPNIEIIGRVLYTDFYYLFLLASFILLVAMIGAIVLTHEINIDIRRQDIFIQ 183
Query: 180 LESN 183
Sbjct: 184 TSRQ 187
>gi|118617955|ref|YP_906287.1| NADH dehydrogenase subunit J [Mycobacterium ulcerans Agy99]
gi|183981489|ref|YP_001849780.1| NADH dehydrogenase I (chain J) NuoJ (NADH- ubiquinone
oxidoreductase chain J) [Mycobacterium marinum M]
gi|118570065|gb|ABL04816.1| NADH dehydrogenase I (chain J) NuoJ (NADH- ubiquinone
oxidoreductase chain J) [Mycobacterium ulcerans Agy99]
gi|183174815|gb|ACC39925.1| NADH dehydrogenase I (chain J) NuoJ (NADH- ubiquinone
oxidoreductase chain J) [Mycobacterium marinum M]
Length = 262
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/198 (20%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A++ + VV N +YS L + A +++ A F+ ++ +VV
Sbjct: 19 TGEAVTFWILGALALVGALGVVMAVNAVYSAMFLAMTMIILAVFYMIQDALFLGVVQVVV 78
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + + + +++ A+ V +
Sbjct: 79 YTGAVMMLFLFVLMLIGVDSAESLKETLRGQRVAALVIGVGFGVLLIAAIGNVAAGGFAG 138
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
NVE + +++++Y + E++ +L+ + IGA+VL R R + ++ ++L
Sbjct: 139 LTAANANGNVEGLAALIFSRYLWAFELTSALLITAAIGAMVLAHRERFERRKSQ--RELS 196
Query: 182 SNPDNSIVMVKVKSGKGI 199
G+
Sbjct: 197 QERFRPGGHPTPLPNPGV 214
>gi|164422216|gb|ABY55189.1| NADH dehydrogenase subunit 6 [Bambusa oldhamii]
Length = 205
Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F AMI+ VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLGLDFSAMISPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL----- 124
FLF++MM +I I R S IG++ + +
Sbjct: 65 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLRY 124
Query: 125 ------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
V N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNALDSRRTI 194
>gi|148244398|ref|YP_001219092.1| NADH dehydrogenase I chain J [Candidatus Vesicomyosocius okutanii
HA]
gi|146326225|dbj|BAF61368.1| NADH dehydrogenase I chain J [Candidatus Vesicomyosocius okutanii
HA]
Length = 203
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 107/195 (54%), Gaps = 2/195 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY+FSF ++SS ++ RN +V L+ AF +AA +++LL AEF+A+I ++
Sbjct: 1 MGFEQIIFYIFSFWFVVSSLAMIFSRNAAKAVLFLVLAFFSAASIWILLEAEFLAIILIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAEL--IVCASNFMVFSAE 118
VYVGAV+V FLF+I ML+ID + R + I+ +V SN
Sbjct: 61 VYVGAVMVLFLFVIKMLNIDKSTIKARFTGYLPLRLIVAIIIIIEMSLVLGSNQFGLDVF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
R +N+ + +YT Y YP E++ +LL+++I AI L+ R+ K+Q IS+
Sbjct: 121 SVPERHSEDYSNITVLAMQIYTTYVYPFELAAVLLLIAIIAAITLVHRNDTSRKKQSISE 180
Query: 179 QLESNPDNSIVMVKV 193
Q+ + + +V +
Sbjct: 181 QVNVQAKDRVRLVSI 195
>gi|164421182|ref|YP_001648568.1| NADH dehydrogenase subunit 6 [Ptilocaulis walpersi]
gi|158938964|gb|ABW83889.1| NADH dehydrogenase subunit 6 [Ptilocaulis walpersi]
Length = 185
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 1/181 (0%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+F IIS +VV+ NP+YSVF LI AF+NA+ LF+LL +F+A+I L+VYVGA+
Sbjct: 4 IFYLFAFNIIISGIMVVSALNPVYSVFWLIIAFINASILFILLDVDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI-VCASNFMVFSAEGELSRLV 125
+ FLF+IMML++ F IG++ + + + +
Sbjct: 64 AILFLFVIMMLNLIDYERGKDMSNYLPAGFVIGVIFFITCRIILLSNQFSTFYVNKFDFI 123
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPD 185
+N+ G+VLYT Y Y I+ ILL++MIGAIVL +++ K QDI Q+
Sbjct: 124 ENFSNITGFGRVLYTDYYYLFLIASLILLIAMIGAIVLTHEIKKEKKNQDIFIQISRKFW 183
Query: 186 N 186
+
Sbjct: 184 D 184
>gi|255037826|ref|YP_003088447.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Dyadobacter
fermentans DSM 18053]
gi|254950582|gb|ACT95282.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Dyadobacter
fermentans DSM 18053]
Length = 172
Score = 112 bits (279), Expect = 4e-23, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M FFY SF+ I+S+ +VV RNPI+SV LI F +G ++LL A+F+A + ++
Sbjct: 1 MNSAVSFFYFLSFLTILSAVMVVVSRNPIHSVLYLILTFFTLSGHYILLNAQFLAAVNII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA++V FLF+IM L++ + E + + + +G ++ A
Sbjct: 61 VYAGAIMVLFLFVIMFLNMKQDQEESKTNLTKIAATIVGGTVFVILFGAYR-KTAIEPFN 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +E++G +L+ Y P E++ +LL++M+GA++L R
Sbjct: 120 PQTYDSQIGMIESLGHMLFRDYLLPFELASILLLVAMVGAVLLGKRE 166
>gi|164421121|ref|YP_001648416.1| NADH dehydrogenase subunit 6 [Cinachyrella kuekenthali]
gi|158938903|gb|ABW83832.1| NADH dehydrogenase subunit 6 [Cinachyrella kuekenthali]
Length = 179
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 65/177 (36%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+ +IS +V++ NP++SV L+ AF+ AAGLF+LL +F+A+I L+VYVGA+
Sbjct: 4 LFYLFALSIVISGVMVISALNPVHSVLWLVVAFIGAAGLFILLEVDFLALILLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IMML++ R G + +E+++ + + +
Sbjct: 64 AILFLFVIMMLNLTGLEGTDRSNYLPTGFIIGVVFLSEVLILQTRIS---MGVDPNWNFM 120
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
+ N+E +G+VLYT Y Y ++ FILL++M+GAIVL + +KRQDI Q
Sbjct: 121 EAPNIEVLGRVLYTNYCYLFILASFILLVAMMGAIVLTHDTKIRVKRQDIFLQTSRK 177
>gi|49474186|ref|YP_032228.1| NADH dehydrogenase subunit J [Bartonella quintana str. Toulouse]
gi|49239690|emb|CAF26065.1| NADH dehydrogenase I, J subunit [Bartonella quintana str. Toulouse]
Length = 206
Score = 111 bits (278), Expect = 5e-23, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 5/191 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ + S+ +V+T RNP++SV LI AF NAA LFLL GAEF+ +I L+VYVGAV V FLF+
Sbjct: 16 IMLASAVIVITARNPVHSVLFLILAFFNAAALFLLAGAEFLGLILLIVYVGAVAVLFLFV 75
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF-----SAEGELSRLVFKG 128
IMMLD+D + R FIG++ A ++ F + + + +
Sbjct: 76 IMMLDVDFAELKSGALRYAPIGAFIGVVVAVELIFVFVSSHFSPVVRTHVTQPMPNLAQR 135
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSI 188
N + +G +LYT Y + +++G ILL++MIGAIVL LRH+ ++RQ I+ Q+ N+I
Sbjct: 136 TNTQALGDILYTDYVFYFQVAGIILLVAMIGAIVLTLRHKSGVRRQSIAVQVSRTVANAI 195
Query: 189 VMVKVKSGKGI 199
+ +V+SGKGI
Sbjct: 196 EIKQVESGKGI 206
>gi|54024628|ref|YP_118870.1| NADH dehydrogenase subunit J [Nocardia farcinica IFM 10152]
gi|54016136|dbj|BAD57506.1| putative NADH dehydrogenase I chain J [Nocardia farcinica IFM
10152]
Length = 274
Score = 111 bits (277), Expect = 6e-23, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 93/201 (46%), Gaps = 5/201 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ + +A++ + +V ++S L + A +++ A F+ ++ +VV
Sbjct: 15 TGEAVQFWILAPLAVLGALGMVFAAKAVHSAICLAATMIALAVMYIAQDALFLGVVQIVV 74
Query: 62 YVGAVIVFFLFIIMMLDIDI-EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
Y GAV++ FLF++M++ +D E + + + +GI L++ + +
Sbjct: 75 YTGAVMMLFLFVLMLVGVDSAESLRETLRGQRIAATVVGIGFGLLLMAGIGIGIRESGVT 134
Query: 121 LSRLVFKG-NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
F G + + + ++++ +Y + E++G +L+ + IGA+VL R + ++
Sbjct: 135 FPATGFPGRDVIAELAELIFLRYVWAFELTGALLITATIGAMVLAHRDHFGART--TQRE 192
Query: 180 LESNP-DNSIVMVKVKSGKGI 199
L + G+
Sbjct: 193 LSRRRFRDGASRATPLPTPGV 213
>gi|217331580|gb|ACK38306.1| NADH dehydrogenase subunit 6 [Isoetes engelmannii]
gi|314908352|gb|ADT62123.1| NADH dehydrogenase subunit 6 [Isoetes engelmannii]
Length = 208
Score = 111 bits (277), Expect = 7e-23, Method: Composition-based stats.
Identities = 65/180 (36%), Positives = 97/180 (53%), Gaps = 10/180 (5%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F +FS +A++S +V+ +NP++SV LI F + +GL L LG +F +MI LVVYVGA
Sbjct: 2 ILFSVFSSIALVSGVMVMRAKNPVHSVLFLILVFCHTSGLLLWLGLDFFSMILLVVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNFMVFS 116
+ V FLF++MML+I I R IG + + S M
Sbjct: 62 IAVLFLFVVMMLNIKIAEIHEDVLRYLPVGGIIGFILGWEMFLIVDNDYIPILSTNMNTL 121
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR-RDIKRQD 175
+ + + N+E IG +LYT Y +S ILL++MIGAIV+ + HR +KRQ+
Sbjct: 122 SYTVCAGKIQSWTNLETIGNLLYTIYLVWFLVSSLILLVAMIGAIVITMEHRTTRVKRQN 181
>gi|72383361|ref|YP_292716.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. NATL2A]
gi|72003211|gb|AAZ59013.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. NATL2A]
Length = 200
Score = 110 bits (276), Expect = 8e-23, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F + S + + S VV + N +YS F L F+ AGL+LLL A FVA ++VYV
Sbjct: 8 ELICFLILSAVIVSGSLAVVLLENIVYSAFLLGGVFMAVAGLYLLLNASFVAAAQILVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++ K G + L++ + +
Sbjct: 68 GAVNVLILFAIMLVNNKEKLKP--IKGLRTRKLISGGVCGGLLILLLRVSITTKWNLPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
E IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 126 TSIGEEATERIGEHLFTDYLLPFELASILLLMAMIGAIVLARR 168
>gi|164420992|ref|YP_001648613.1| NADH dehydrogenase subunit 6 [Halisarca dujardini]
gi|158668146|gb|ABW76605.1| NADH dehydrogenase subunit 6 [Halisarca dujardini]
Length = 196
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 71/189 (37%), Positives = 99/189 (52%), Gaps = 12/189 (6%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+ I S +V++ NP++SV LIFAF NA+ LF+LL EF+A I L+VYVGA+
Sbjct: 4 LFYLFALGVIFSGIMVISSLNPVHSVLWLIFAFTNASALFILLEVEFLAFIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDI-------EVAEPRKKRGFLGSFFIGILAAELIVCASN-----FMV 114
+ FLF+IMML++ A IGI+ I+ N ++
Sbjct: 64 AILFLFVIMMLNLTPNTGGEFGPNANSDMSNYLPAGLVIGIVFLFEILIWHNHSEGYYLS 123
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
V N+E IG+VLYT + Y ++ FILL++MIGAIVL +I+ Q
Sbjct: 124 SGCVPVYYNCVISSPNIEIIGRVLYTDFYYLFLLASFILLVAMIGAIVLTHDINTEIRXQ 183
Query: 175 DISKQLESN 183
DI Q
Sbjct: 184 DIFIQTSRQ 192
>gi|22550345|ref|NP_689370.1| NADH dehydrogenase subunit 6 [Chaetosphaeridium globosum]
gi|22417011|gb|AAM96610.1|AF494279_15 NADH dehydrogenase subunit 6 [Chaetosphaeridium globosum]
Length = 195
Score = 110 bits (276), Expect = 9e-23, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 6/194 (3%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ F LFS +A++S+ +V++ +NP++S+ LI F NA+ L +LLG +F AMI LVVYVG
Sbjct: 2 TILFCLFSSIALVSAGMVISAKNPVHSILFLILVFCNASALLVLLGLDFFAMIFLVVYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA------SNFMVFSAE 118
A+ V FLF++MML+I+I R I ++ + S + A
Sbjct: 62 AIAVLFLFVVMMLNINIAEIHENVVRYLPIGGIIALIFLLEMFLVVEGLPTSTIIQAPAY 121
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + N+E +G +LYT Y I ILL++MIGAIVL + +KRQD+
Sbjct: 122 TIFAEKIESLTNLEALGNLLYTTYFLLFLICSLILLIAMIGAIVLTMHKTTKVKRQDVFL 181
Query: 179 QLESNPDNSIVMVK 192
Q + +I ++
Sbjct: 182 QNSVDFSTTIRKIR 195
>gi|164421137|ref|YP_001648582.1| NADH dehydrogenase subunit 6 [Ectyoplasia ferox]
gi|158668128|gb|ABW76588.1| NADH dehydrogenase subunit 6 [Ectyoplasia ferox]
Length = 185
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 69/182 (37%), Positives = 104/182 (57%), Gaps = 1/182 (0%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+F IIS +V++ NPIYSVF LI AF+NA+ LF+LL +F+A+I L+VYVGA+
Sbjct: 4 IFYLFAFNVIISGIMVISALNPIYSVFWLIIAFINASVLFILLEVDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI-VCASNFMVFSAEGELSRLV 125
+ FLF+IMML++ F IG++ + + + V
Sbjct: 64 AILFLFVIMMLNLIDYEKGRDMSNYLPAGFVIGVIFFITCRIIILSSQLSLFSLNRFDYV 123
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPD 185
+N+ +G+VLYT Y Y I+ ILL++MIGAI+L +++ K QD+ Q+
Sbjct: 124 ENFSNIIGLGRVLYTDYYYLFLIASLILLVAMIGAIILTHETKKEKKDQDMFIQISRELW 183
Query: 186 NS 187
+S
Sbjct: 184 DS 185
>gi|317134340|ref|YP_004123126.1| NADH dehydrogenase subunit 6 [Oscarella microlobata]
gi|308912655|gb|ADO51418.1| NADH dehydrogenase subunit 6 [Oscarella microlobata]
Length = 197
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 68/190 (35%), Positives = 101/190 (53%), Gaps = 14/190 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ IIS +V++ NPI+SVF LI F+ A+ LF+LLG +F+A+I L+VYVG +
Sbjct: 4 LFYMFALGVIISGIMVISALNPIHSVFWLIVVFLGASALFILLGIDFIALIFLIVYVGXI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN--------------F 112
+ FLF+IMML++ IG+L ++
Sbjct: 64 AILFLFVIMMLNLTDLEGGGDMSNYIPIGSVIGVLLLFEVLIMGREATAYSYRDIDHECL 123
Query: 113 MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ S + K +N+E +G+VLYT Y Y I+ FILL++MIGAIVL ++K
Sbjct: 124 KGGVDAWDTSIEIIKSSNIEVLGRVLYTDYYYLFIIASFILLVAMIGAIVLTHELGAELK 183
Query: 173 RQDISKQLES 182
RQD+ Q
Sbjct: 184 RQDLFIQTSR 193
>gi|89280733|ref|YP_514639.1| NADH dehydrogenase subunit 6 [Oryza sativa Indica Group]
gi|289065047|ref|YP_003433858.1| NADH dehydrogenase subunit 6 [Oryza rufipogon]
gi|74100100|gb|AAZ99264.1| NADH dehydrogenase subunit 6 [Oryza sativa Indica Group]
gi|74100155|gb|AAZ99318.1| NADH dehydrogenase subunit 6 [Oryza sativa Japonica Group]
gi|74100209|gb|AAZ99371.1| NADH dehydrogenase subunit 6 [Oryza sativa Japonica Group]
gi|285026129|dbj|BAI67962.1| NADH dehydrogenase subunit 6 [Oryza rufipogon]
gi|285026159|dbj|BAI67991.1| NADH dehydrogenase subunit 6 [Oryza sativa Indica Group]
Length = 205
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + AGL +LLG +F AMI+ VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTAGLLILLGLDFSAMISPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL----- 124
FLF++MM +I I R S IG++ + +
Sbjct: 65 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLRY 124
Query: 125 ------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
V N+E +G +LYT Y+ +S ILL++MIGAIVL + ++RQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVQRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNALDSRRTI 194
>gi|284034160|ref|YP_003384091.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Kribbella
flavida DSM 17836]
gi|283813453|gb|ADB35292.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Kribbella
flavida DSM 17836]
Length = 277
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 91/197 (46%), Gaps = 2/197 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
F+L + + ++++ ++ VR ++S L + A + A F+ + ++VY G
Sbjct: 6 QFAFWLLAPVMVLAAIAMILVRKAVHSALLLATVMICLAVQYAAQDAPFLFAVQIIVYTG 65
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A+++ FLF++M++ +D + RG + L ++V + +
Sbjct: 66 AILMLFLFVLMLVGVDASDSLVETIRGQRLLAGLAFLGFAVLVVFAVGNAVYGDPIGLGQ 125
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR--QDISKQLES 182
N + I ++L+ +Y + E++ +L+ + +GA++L R R K+ +D++++
Sbjct: 126 AQPDGNPKGIAQLLFGKYVFAFEVTSALLITAAMGAMMLAHRERLTRKKTQRDLAEERIR 185
Query: 183 NPDNSIVMVKVKSGKGI 199
++ V G+
Sbjct: 186 KYADTGVHPGPLPTPGV 202
>gi|124286766|ref|YP_001023660.1| NADH dehydrogenase subunit 6 [Savalia savaglia]
gi|110083985|gb|ABG49162.1| NADH dehydrogenase subunit 6 [Savalia savaglia]
Length = 221
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 36/221 (16%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FY SF AI S +V++ NP++SVF L+ AF +++ LF+LLGA+F+A++ L+VY
Sbjct: 1 MTWACFYTLSFGAIASGIMVISALNPVHSVFWLVVAFTSSSALFILLGADFIALMFLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------ 116
VGA+ + FLF+IMML++ R + ++ + A + S
Sbjct: 61 VGAIAILFLFVIMMLNLTDFPPAYRLGGETDMTNYVPVGLAIGTLFFSEIASSWLIMGGH 120
Query: 117 --------------------------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISG 150
+ K +N+E IG++LYT Y Y ++
Sbjct: 121 SALAGPFGAATSGHASALRPLELGGNWNLANPWFLIKCHNIEAIGRLLYTDYYYLFILAS 180
Query: 151 FILLLSMIGAIVLMLRHRRDI----KRQDISKQLESNPDNS 187
FILL++MIGAIVL +I K+QDI Q+ P+ +
Sbjct: 181 FILLVAMIGAIVLTQEIGEEIGATAKKQDIFLQISRAPEGA 221
>gi|311741751|ref|ZP_07715562.1| NADH-quinone oxidoreductase subunit J [Aeromicrobium marinum DSM
15272]
gi|311314757|gb|EFQ84663.1| NADH-quinone oxidoreductase subunit J [Aeromicrobium marinum DSM
15272]
Length = 255
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 89/194 (45%), Gaps = 2/194 (1%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
F++ + + ++++ +V R +++ L ++ A L+ + GA F+ + ++VY GA++
Sbjct: 4 FWILAPIMVLAALGLVFSRKAVHAALWLAVVMISLAVLYAVQGAPFLFAVQIIVYTGAIM 63
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
+ FLF++M++ ++ +++ +G + L +++ V
Sbjct: 64 MLFLFVVMLVGVESDLSLTETIKGQRAGAIVVGLLFGVLLVIGVGQVSVGPVTGLDEANA 123
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK--RQDISKQLESNPD 185
NV + +++ + + + +L+ +++GA+VL R R + + D++ + +
Sbjct: 124 NGNVYGLAALMFGPFVLAFQFTAALLVTAVLGAMVLAHRERLTPRLTQADLAARRMRDYA 183
Query: 186 NSIVMVKVKSGKGI 199
+ G+
Sbjct: 184 ETGRHPGNAPTPGV 197
>gi|229328270|ref|YP_002860283.1| NADH dehydrogenase subunit 6 [Megaceros aenigmaticus]
gi|186695239|gb|ACC86806.1| NADH dehydrogenase subunit 6 [Nothoceros aenigmaticus]
Length = 201
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F + S +A++S +NP++SV I F N +GL +LLG + AMI LVVYVGA
Sbjct: 2 ILFSVPSSIALVSGVTATRAKNPVHSVLFSIPVFRNTSGLLVLLGLDPFAMIFLVVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMV 114
+ V + +I I R G++ I
Sbjct: 62 IAVSPSSVATTSNIKIAEIHENVLRYLPVGGITGLILLLEIFFIVDNDYIPILPTKLSTT 121
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + + N+E +G +LYT Y S FI L++MIGA VL + +KRQ
Sbjct: 122 YLTYTVYAGKIQSWTNLETLGNLLYTTYFTSFLFSSFISLVAMIGATVLTMHRTTRVKRQ 181
Query: 175 DISKQLESNPDNSIVMVK 192
D+ +Q + N+I ++
Sbjct: 182 DVFRQNARDFRNTIKKIR 199
>gi|302523886|ref|ZP_07276228.1| NADH dehydrogenase subunit J [Streptomyces sp. AA4]
gi|302432781|gb|EFL04597.1| NADH dehydrogenase subunit J [Streptomyces sp. AA4]
Length = 275
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ ++++ + ++ RN ++S L+ + L++ A F+ ++V
Sbjct: 3 TGEAIAFWILGPLSLLGALGMIFSRNAVHSALWLVLTMLTLGALYMTQSAPFLGFTQIIV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF++M++ D + RG + + + ++ A F +
Sbjct: 63 YTGAIMMLFLFVLMLVGRDSSDSVVEVLRGQRLAAGVLGIGLAALIAAGVFRAMANVTPA 122
Query: 122 SRLVF---KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
L G +G++++TQY +P E++ +L+ + +GA+VL R + +
Sbjct: 123 KPLDPYQQTGGGPGGLGRLIFTQYLFPFELTSALLITAALGAMVLAFTGRSGKSKLSQRE 182
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
++ G G+
Sbjct: 183 LVKLRFQGKHDRPSPLPGPGV 203
>gi|164421155|ref|YP_001648557.1| NADH dehydrogenase subunit 6 [Chondrilla aff. nucula CHOND]
gi|158668116|gb|ABW76577.1| NADH dehydrogenase subunit 6 [Chondrilla aff. nucula CHOND]
Length = 191
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 98/184 (53%), Gaps = 7/184 (3%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+ I S +V++ NP++SV LIFAF NA+ LF+LL EF+A I L+VYVGA+
Sbjct: 4 LFYLFALGVIFSGIMVISSLNPVHSVLWLIFAFTNASALFILLEVEFLAFIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDI--EVAEPRKKRGFLGSFFIGILAAELIVCASN-----FMVFSAEG 119
+ FLF+IMML++ IGI+ I+ N ++
Sbjct: 64 AILFLFVIMMLNLTDFGYNINSDMSNYLPAGLIIGIVFLFEILIWHNHSEGYYLSSDCVP 123
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
V N+E IG+VLYT + Y ++ FIL ++MIGAIVL +I+RQD+ Q
Sbjct: 124 IYYNCVIPSPNIEIIGRVLYTDFYYLFLLASFILXVAMIGAIVLTHEINIEIRRQDLFIQ 183
Query: 180 LESN 183
Sbjct: 184 TSRQ 187
>gi|29654730|ref|NP_820422.1| NADH dehydrogenase (ubiquinone), J subunit [Coxiella burnetii RSA
493]
gi|153207244|ref|ZP_01946008.1| NADH dehydrogenase (ubiquinone), J subunit [Coxiella burnetii 'MSU
Goat Q177']
gi|154707308|ref|YP_001423966.1| NADH-quinone oxidoreductase chain J [Coxiella burnetii Dugway
5J108-111]
gi|161831359|ref|YP_001597283.1| NADH dehydrogenase (ubiquinone), J subunit [Coxiella burnetii RSA
331]
gi|165918812|ref|ZP_02218898.1| NADH dehydrogenase (ubiquinone), J subunit [Coxiella burnetii RSA
334]
gi|212218222|ref|YP_002305009.1| NADH-quinone oxidoreductase chain J [Coxiella burnetii CbuK_Q154]
gi|29541998|gb|AAO90936.1| NADH-quinone oxidoreductase chain J [Coxiella burnetii RSA 493]
gi|120576732|gb|EAX33356.1| NADH dehydrogenase (ubiquinone), J subunit [Coxiella burnetii 'MSU
Goat Q177']
gi|154356594|gb|ABS78056.1| NADH-quinone oxidoreductase chain J [Coxiella burnetii Dugway
5J108-111]
gi|161763226|gb|ABX78868.1| NADH dehydrogenase (ubiquinone), J subunit [Coxiella burnetii RSA
331]
gi|165917536|gb|EDR36140.1| NADH dehydrogenase (ubiquinone), J subunit [Coxiella burnetii RSA
334]
gi|212012484|gb|ACJ19864.1| NADH-quinone oxidoreductase chain J [Coxiella burnetii CbuK_Q154]
Length = 201
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 118/196 (60%), Gaps = 2/196 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + F++F+ + I ++ +V+ RNP+++V L+ AF +A L++++ AEF+A++ + VY
Sbjct: 4 IYEVTFFIFAAVLIAAAAMVIISRNPVHAVLFLVLAFFASAVLWMMMQAEFLALVLIFVY 63
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRK-KRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
VGAV+ FLF++MML+ID+ + + + G + +L ++V S A L
Sbjct: 64 VGAVMTLFLFVVMMLNIDLSDLQQKFVRFLPFGLIAMALLIGMMVVIVSPRHFTVATAHL 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR-DIKRQDISKQL 180
+ +NV+ +G +LY Y YP EI+ ILL+++I AI L R+ + K Q + +QL
Sbjct: 124 PHVASNFSNVKAMGSLLYVDYFYPFEIAAVILLVAIIAAITLAFHGRKPNTKSQRVREQL 183
Query: 181 ESNPDNSIVMVKVKSG 196
E+ +N + ++K+K+
Sbjct: 184 EAKKENRLRVIKMKTE 199
>gi|159902716|ref|YP_001550060.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9211]
gi|159887892|gb|ABX08106.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Prochlorococcus marinus str. MIT 9211]
Length = 200
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F + + I S VV + N +YS F L F+ AGL+LLL A FVA ++VYV
Sbjct: 8 EQICFLILGLIVIGGSLGVVLLNNIVYSAFLLGGVFMGVAGLYLLLNASFVAAAQILVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ E+ K + L++ + +
Sbjct: 68 GAVNVLILFAIMLVNKKEELKP--IKALRTRKILSAGVCTGLLILLFRVDITTPWIFPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ E IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 126 NSIGELSTERIGEHLFTDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|124024944|ref|YP_001014060.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. NATL1A]
gi|123960012|gb|ABM74795.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Prochlorococcus marinus str. NATL1A]
Length = 200
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F + S + + S VV + N +YS F L F+ AGL+LLL A FVA ++VYV
Sbjct: 8 ELICFLILSAIIVSGSLAVVLLENIVYSAFLLGGVFMAVAGLYLLLNASFVAAAQILVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++ K G + L++ + +
Sbjct: 68 GAVNVLILFAIMLVNNKEKLKP--IKGLRTRKLISGGVCGGLLILLLRVSITTKWNLPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
E IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 126 TSIGEEATEIIGEHLFTDYLLPFELASILLLMAMIGAIVLARR 168
>gi|164420978|ref|YP_001648600.1| NADH dehydrogenase subunit 6 [Xestospongia muta]
gi|158938983|gb|ABW83907.1| NADH dehydrogenase subunit 6 [Xestospongia muta]
Length = 187
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 103/180 (57%), Gaps = 4/180 (2%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+ IIS +V++ +P+YSV LI AFV+A+ LF+LL EF+A I L+VYVGA+
Sbjct: 4 LFYLFTLGVIISGIMVISALSPVYSVLWLIMAFVSASALFILLEVEFIAFIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IMML++ E F IG++ I N ++ L +V
Sbjct: 64 AILFLFVIMMLNLTEETIGDDMSNYLPAGFIIGVVFLFEIFIFWNGTTDGSQMVLYWVV- 122
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR---DIKRQDISKQLESN 183
K N+E +G+VLYT Y Y ++ FILL++MIGAIVL D KRQDI Q
Sbjct: 123 KNTNIEVLGRVLYTDYYYLFIVASFILLVAMIGAIVLTHDTGTEIQDRKRQDIFVQTSRQ 182
>gi|164420948|ref|YP_001648461.1| NADH dehydrogenase subunit 6 [Amphimedon compressa]
gi|158668072|gb|ABW76536.1| NADH dehydrogenase subunit 6 [Amphimedon compressa]
Length = 184
Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats.
Identities = 70/178 (39%), Positives = 99/178 (55%), Gaps = 4/178 (2%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+ A IS +V++ + ++SV LI F++A+ LF+LL EF+A I L+VYVGA+
Sbjct: 4 LFYLFALGATISGIMVISAFSSVHSVLWLIMVFISASALFILLEVEFIAFIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IMML++ IGI+ + A +F + G LV
Sbjct: 64 AILFLFVIMMLNLTGPGMGDDMSNYLPAGLIIGIVF---LFEALSFRSTTLGGNWPLLVE 120
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR-RDIKRQDISKQLESN 183
K N+E +G+VLYT Y Y I+ FILL++MIGAIVL K QDI Q+
Sbjct: 121 KAPNIEVLGRVLYTDYYYLFIIASFILLVAMIGAIVLTHDEGIEKRKGQDIYIQISRQ 178
>gi|229821700|ref|YP_002883226.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Beutenbergia
cavernae DSM 12333]
gi|229567613|gb|ACQ81464.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Beutenbergia
cavernae DSM 12333]
Length = 286
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 84/172 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ + + +I++ ++ R +++ S++F V A L+ L A F+ + +VV
Sbjct: 9 TGEAVLFWVLAPLMVIAALGLLFARKAVHAAISVVFVMVALAFLYTALEAPFLGVAQVVV 68
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ F+F++M++ +D + +G + + ++ + +
Sbjct: 69 YTGAVMTLFVFVLMLVGVDASDSVVETLQGQRWIAVLFGVGLASVLIGVIATATLPDAQG 128
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
V N + ++++ Q+ + E+ G +L+ + +GAI L R R KR
Sbjct: 129 LAEVNTDGNPVGVARLIFGQFVFAFELVGALLITAALGAITLTHRERLGRKR 180
>gi|326329619|ref|ZP_08195941.1| NADH dehydrogenase I, J subunit [Nocardioidaceae bacterium Broad-1]
gi|325952615|gb|EGD44633.1| NADH dehydrogenase I, J subunit [Nocardioidaceae bacterium Broad-1]
Length = 238
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 79/165 (47%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
F + + + +I++ ++ R P+++ SL V A ++ L A F+ + +VVY GA++
Sbjct: 3 FVILASVTVIAALGLLFARKPVHAALSLAVVMVGLAMIYATLEAPFLFAVQIVVYTGAIL 62
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
+ FLF+IM++ +D G + + + A A +
Sbjct: 63 MLFLFVIMLVGVDTSDTLKETIAGQKVLAALLGIGLGATLIAGVGQASIATMRGLSSANE 122
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
G NV+ + +L+++Y E + +L+ + IGA+VL R R D K
Sbjct: 123 GGNVQRLADLLFSRYVIAFEATSALLITAAIGAMVLAHRERIDPK 167
>gi|119714793|ref|YP_921758.1| NADH dehydrogenase subunit J [Nocardioides sp. JS614]
gi|119535454|gb|ABL80071.1| NADH dehydrogenase subunit J [Nocardioides sp. JS614]
Length = 275
Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F++ + + +I++ ++ VR +++ L ++ A L+ L A F+ + ++VY GA
Sbjct: 2 IAFWILAPVMVIAALGLLFVRKAVHAALLLAVVMMSLAVLYAALEAPFLFAVQIIVYTGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+++ FLF++M++ +D + RG I L L++ +
Sbjct: 62 ILMLFLFVLMLVGVDASDSVVETIRGQRVLAAIAGLGLGLVMVLGLSQISLGTAVGLEDA 121
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK--RQDISKQLESN 183
G N++ + +L+++Y + E++ +L+ + +GA+VL R R K + ++ Q +
Sbjct: 122 NSGGNIQALANILFSRYVFAFEVTSALLITAAVGAMVLAHRERLTPKPTQMSLAAQRMKD 181
Query: 184 PDNSIVMVKVKSGKGI 199
G+
Sbjct: 182 YAERGTHPGPLPPPGV 197
>gi|164421078|ref|YP_001648623.1| NADH dehydrogenase subunit 6 [Agelas schmidti]
gi|158938993|gb|ABW83916.1| NADH dehydrogenase subunit 6 [Agelas schmidti]
Length = 189
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 100/185 (54%), Gaps = 4/185 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FY F+ I+S +V++ NP++SVF LI AF +A+ LF+LL EF+A++ L+VY
Sbjct: 1 MLEGLFYFFALSVILSGIMVISAFNPVHSVFWLILAFTSASALFILLEVEFIALMFLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ + FLF+IMML++ F IG++ S+ S
Sbjct: 61 VGAIAILFLFVIMMLNLMDFEMGGDMSNFLATGFLIGVVFLINCRVVSHLGRPSFYSFSW 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI----KRQDISK 178
V K N+E IG+VLYT Y Y ++ FILL++M+GAIVL + KRQ I
Sbjct: 121 DFVGKTTNIEVIGRVLYTNYYYLFILASFILLVAMVGAIVLTHDRESIVPSSLKRQTIFA 180
Query: 179 QLESN 183
Q+
Sbjct: 181 QISRQ 185
>gi|56750217|ref|YP_170918.1| NADH dehydrogenase subunit J [Synechococcus elongatus PCC 6301]
gi|56685176|dbj|BAD78398.1| NADH dehydrogenase subunit 6 [Synechococcus elongatus PCC 6301]
Length = 201
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + ++++ VV N +YS F L AF++ AGL+LLL A FVA +++Y
Sbjct: 7 VQLVTFIILTAGVVLAALGVVLSSNIVYSAFLLGGAFISIAGLYLLLNASFVAFAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + P K + + + + + +
Sbjct: 67 VGAVNVLILFAIMLVNKREDF-RPLKFNWLRKGLTVLVCGGLFALLSLTVISTPWAVTPT 125
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ IG+ ++ Y P E++ +LL++MIGAIVL R
Sbjct: 126 PGASGDEAIYLIGEHFFSDYLLPFELASVLLLMAMIGAIVLARR 169
>gi|254416218|ref|ZP_05029972.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Microcoleus chthonoplastes PCC 7420]
gi|196176900|gb|EDX71910.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Microcoleus chthonoplastes PCC 7420]
Length = 208
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + S M I S+ VV + N +YS F L F++ AG +LLL A+FVA ++VY
Sbjct: 7 VQFVSFVILSVMMIGSALGVVLLNNIVYSAFLLGGVFISMAGFYLLLNADFVAAAQILVY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + G+ + L ++ + + +
Sbjct: 67 VGAVNVLILFAIMLVNKREDFKPITNRWIRQGATALVCLGLFALLGTMVLVTPWSIYSGT 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
++ +G+ VE IGK ++ + P E++ +LL++M+GAI+L R
Sbjct: 127 AVLGEGSVVE-IGKHFFSDFLLPFELASVLLLMAMVGAIILARR 169
>gi|224109646|ref|XP_002333226.1| predicted protein [Populus trichocarpa]
gi|224144011|ref|XP_002336100.1| predicted protein [Populus trichocarpa]
gi|222835539|gb|EEE73974.1| predicted protein [Populus trichocarpa]
gi|222872374|gb|EEF09505.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F N +GL +LLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVARAKNPVHSVLFSILVFRNTSGLLILLGLDFSAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AE 118
FLF++MM I I R S IG++ + +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRKTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAISFRRTI 194
>gi|126659018|ref|ZP_01730159.1| NADH dehydrogenase subunit J [Cyanothece sp. CCY0110]
gi|126619675|gb|EAZ90403.1| NADH dehydrogenase subunit J [Cyanothece sp. CCY0110]
Length = 208
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + + II++ VV + N +YS F L F++ +G+++LL A+FVA +++Y
Sbjct: 7 VQVISFAILAALVIIAALGVVLLENIVYSAFLLGGVFISISGIYILLNADFVAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + + + + + + A+ ++ E +
Sbjct: 67 VGAVNVLILFAIMLVNKKQDYSNLPGRWLKRSATAL-VCGGLFALLATMVLITPWSLETN 125
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
N V IGK ++ + P E++ +LL++M+GAIVL R
Sbjct: 126 APGLIENTVVEIGKHFFSDFLLPFELASVLLLMAMVGAIVLARR 169
>gi|81300154|ref|YP_400362.1| NADH dehydrogenase subunit J [Synechococcus elongatus PCC 7942]
gi|81169035|gb|ABB57375.1| NADH dehydrogenase subunit 6 [Synechococcus elongatus PCC 7942]
Length = 201
Score = 108 bits (269), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + ++++ VV N +YS F L F++ AGL+LLL A FVA +++Y
Sbjct: 7 VQLVTFIILTAGVVLAALGVVLSSNIVYSAFLLGGVFISIAGLYLLLNASFVAFAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + P K + + + + + +
Sbjct: 67 VGAVNVLILFAIMLVNKREDF-RPLKFNWLRKGLTVLVCGGLFALLSLTVISTPWAVTPT 125
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ IG+ ++ Y P E++ +LL++MIGAIVL R
Sbjct: 126 PGASGDEAIYLIGEHFFSDYLLPFELASVLLLMAMIGAIVLARR 169
>gi|269958708|ref|YP_003328495.1| NADH dehydrogenase subunit J [Anaplasma centrale str. Israel]
gi|269848537|gb|ACZ49181.1| NADH dehydrogenase subunit J [Anaplasma centrale str. Israel]
Length = 200
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 72/199 (36%), Positives = 114/199 (57%), Gaps = 5/199 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M S F+ F+ +A++S+ V+ + NPIYSV SLI F ++ +F++LGAE VAM+ ++VY
Sbjct: 1 MLSFLFFCFAGVAVLSAVGVILLPNPIYSVLSLILTFFVSSAVFIMLGAELVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLDI + + + +L + S F V SA S
Sbjct: 61 VGAVAVLFLFVVMMLDISRVRSRHGLVKRYPLGV-ACMLLFFGCMVYSIFHVKSATIGAS 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK--RQDISKQL 180
V NV IG LYT+YAY +++G +LL++ +G++VL+ K +QD+S+Q+
Sbjct: 120 EGVVGVGNVFLIGSRLYTEYAYAFQLAGVLLLIAGVGSLVLVAGGGDGRKSLKQDVSQQI 179
Query: 181 ESNPDNSIVMVKVKSGKGI 199
+ I ++ G G+
Sbjct: 180 GR--SSKIRLLSPGVGAGV 196
>gi|186920131|ref|YP_001874785.1| NADH dehydrogenase subunit 6 [Hemiselmis andersenii]
gi|186461077|gb|ACC78239.1| NADH dehydrogenase subunit 6 [Hemiselmis andersenii]
Length = 208
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 102/203 (50%), Gaps = 17/203 (8%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+++ F FS + + V+T +NPI+SV L+ F N +GL +LLG EF+A + L+VY
Sbjct: 1 MEAILFLFFSSLTLTCGLFVITSKNPIHSVLFLVLVFFNVSGLLILLGVEFLAFLFLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA------------- 109
VGA+ V FLFI+MML I I + R +G I+
Sbjct: 61 VGAIAVLFLFIVMMLSIKIPEYKLIIYRYIPIGVILGTGFLCEILIVFESELSSLIVSPF 120
Query: 110 ----SNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
N ++ V N+E VLYT YAY I+G ILL+SMIGAI L L
Sbjct: 121 GKLTFNTFYLNSITLWDVNVVPITNIEVFAGVLYTHYAYFFIIAGIILLVSMIGAITLTL 180
Query: 166 RHRRDIKRQDISKQLESNPDNSI 188
R DIKRQ I KQ++ +I
Sbjct: 181 HRRIDIKRQKIYKQVQKEFAKTI 203
>gi|254424929|ref|ZP_05038647.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Synechococcus sp. PCC 7335]
gi|196192418|gb|EDX87382.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Synechococcus sp. PCC 7335]
Length = 197
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F L + ++ + VV + + +YS F L F++ AG ++LL A FVA +++Y
Sbjct: 5 VQVVSFGLLGLIMVVGALGVVLLSSIVYSAFLLGLVFISIAGFYILLNAGFVAAAQVLIY 64
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + E K ++G G + A L S ++ S
Sbjct: 65 VGAVNVLILFGIMLVNKQEDFIEV--KNAWIGKAATGAVCAGLFGLLSTMVLSHPWAISS 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+E IG+ ++ Y P E++ +LL++++GAI+L R
Sbjct: 123 APAAGDKAIEVIGQHFFSDYLLPFELASVLLLIALVGAIILARRE 167
>gi|212212191|ref|YP_002303127.1| NADH-quinone oxidoreductase chain J [Coxiella burnetii CbuG_Q212]
gi|212010601|gb|ACJ17982.1| NADH-quinone oxidoreductase chain J [Coxiella burnetii CbuG_Q212]
Length = 201
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 118/196 (60%), Gaps = 2/196 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + F++F+ + I ++ +V+ RNP+++V L+ AF +A L++++ AEF+A++ + VY
Sbjct: 4 IYEVTFFIFAAVLIAAAAMVIISRNPVHAVLFLVLAFFASAVLWMMMQAEFLALVLIFVY 63
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRK-KRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
VGAV+ FLF++MML+ID+ + + + G + +L ++V S A L
Sbjct: 64 VGAVMTLFLFVVMMLNIDLSDLQQKFVRFLPFGLIAMALLIGMMVVIVSPRHFTVATAHL 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR-DIKRQDISKQL 180
+ +NV+ +G +LY Y YP EI+ ILL+++I AI L R+ + K Q + +QL
Sbjct: 124 PHVASNFSNVKAMGSLLYVDYFYPFEIAAVILLVAIIAAITLAFHGRKPNTKFQRVREQL 183
Query: 181 ESNPDNSIVMVKVKSG 196
E+ +N + ++K+K+
Sbjct: 184 EAKKENRLRVIKMKTE 199
>gi|172037137|ref|YP_001803638.1| NADH dehydrogenase subunit J [Cyanothece sp. ATCC 51142]
gi|171698591|gb|ACB51572.1| NADH dehydrogenase subunit 6 [Cyanothece sp. ATCC 51142]
Length = 208
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + + II++ VV + N +YS F L F++ +G+++LL A+FVA +++Y
Sbjct: 7 VQVISFAILAALVIIAALGVVLLENIVYSAFLLGGVFISISGIYVLLNADFVAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + + G+ + ++ + + +
Sbjct: 67 VGAVNVLILFAIMLVNKKQDYSNLPGRWIKRGATALVCGGLFALLATMVLITPWSLESNA 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ + VE IGK ++ + P E++ +LL++M+GAIVL R
Sbjct: 127 PGLIENTVVE-IGKHFFSDFLLPFELASVLLLMAMVGAIVLARR 169
>gi|169629229|ref|YP_001702878.1| NADH dehydrogenase subunit J [Mycobacterium abscessus ATCC 19977]
gi|169241196|emb|CAM62224.1| NADH-quinone oxidoreductase, J subunit NuoJ [Mycobacterium
abscessus]
Length = 259
Score = 107 bits (268), Expect = 7e-22, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 76/169 (44%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F++ +A++ + V+ +YS L V A F+ GA F+ + +VV
Sbjct: 23 TWEGVTFWVLGAIAVLGALGVIAAPKAVYSAIFLAMTMVILAVFFVAQGALFLGVAQVVV 82
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M + +D + G L ++ AS +
Sbjct: 83 YTGAVMMLFLFVLMFVGVDSSDSLVETLPGQRVGAVAAGLGFGILAIASIGNASTTVFVG 142
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
NVE + + ++ Y + E++G +L+ + IGA+VL R +
Sbjct: 143 LGQANSRGNVEGLAERIFIDYLWAFELTGALLITATIGAMVLAHREKLG 191
>gi|282897415|ref|ZP_06305417.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Raphidiopsis
brookii D9]
gi|281198067|gb|EFA72961.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Raphidiopsis
brookii D9]
Length = 214
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+QS+ F + M I ++ VV N +YS F L F++ AGL+LLL +FVA +++Y
Sbjct: 19 VQSVSFGILGAMMIGAALGVVLFSNIVYSAFLLGGVFISMAGLYLLLNGDFVAAAQVLIY 78
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF IM+++ + A G+++ L S ++ + G +
Sbjct: 79 VGAINVLILFAIMLVNKRQDFAAIPSAGL--RKIVTGVVSLGLFALLSTMVLATPWGNTT 136
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
N+V IG+ L++ + P E++ +LL++M+GAI+L R
Sbjct: 137 TPPATQNSVVVIGEHLFSDFLLPFELASILLLIAMVGAIILARRE 181
>gi|113953515|ref|YP_731811.1| NADH dehydrogenase subunit J [Synechococcus sp. CC9311]
gi|113880866|gb|ABI45824.1| NADH-ubiquinone/plastoquinone oxidoreductase, subunit 6
[Synechococcus sp. CC9311]
Length = 199
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q + F S + ++ + VV + N +YS F L F+ AGL+LLL A FVA ++VYV
Sbjct: 8 QLICFLALSAVIVLGALGVVLLSNIVYSAFLLGGVFLAVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++A G + + +V +
Sbjct: 68 GAVNVLILFAIMLVNKKEDLAP---IPGLPIRRLLSGGVCVGLFALLTRVVVTTPWTEGP 124
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 125 TPIGEDATVRIGEHLFTDYLLPFELASVLLLMAMIGAIVLARR 167
>gi|194476796|ref|YP_002048975.1| NADH dehydrogenase subunit J [Paulinella chromatophora]
gi|221272340|sp|B1X496|NU6C_PAUCH RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6, organellar
chromatophore; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|171191803|gb|ACB42765.1| NADH dehydrogenase subunit J [Paulinella chromatophora]
Length = 205
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/169 (32%), Positives = 90/169 (53%), Gaps = 2/169 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q + F+ S I+ + VV + N +YS F L F++ AGL+LLL A FVA +++YV
Sbjct: 8 QLICFFALSATLILGALGVVLLPNIVYSAFLLGSVFLSVAGLYLLLNASFVAAAQVLIYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ + E+ + FF G++ L+V + ++
Sbjct: 68 GAVNVLILFAIMLVNREEEL--KVIPGLAIRRFFSGVVCMGLLVILERIATTTHWAQVGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ IG+ L++ Y P E++ +LL++MIGAIVL + D+K
Sbjct: 126 IPLGEEATIRIGEHLFSDYLLPFELASILLLIAMIGAIVLARKDLVDLK 174
>gi|284929387|ref|YP_003421909.1| NADH dehydrogenase subunit J [cyanobacterium UCYN-A]
gi|284809831|gb|ADB95528.1| NADH dehydrogenase subunit J [cyanobacterium UCYN-A]
Length = 207
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + + IIS+ VV + N +YS F L F+ +GL++LL A+F+A +++Y
Sbjct: 7 VQLVSFAILAGLVIISALGVVLLSNIVYSAFLLGGVFIGISGLYILLNADFIAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF IM+++ + + K + + ++ +M +
Sbjct: 67 VGAINVLILFAIMLVNKKGDYSNSSKSWINRVATMMVCGGIFALLSTVVYMTPWNVEAVV 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
V + ++ IG+ L++ Y P E++ +LL++M+GAIVL R
Sbjct: 127 PEVLESTVIK-IGRHLFSDYLLPFELASVLLLIAMVGAIVLARR 169
>gi|16332084|ref|NP_442812.1| NADH dehydrogenase subunit J [Synechocystis sp. PCC 6803]
gi|2506948|sp|P26523|NU6C_SYNY3 RecName: Full=NAD(P)H-quinone oxidoreductase chain 6; AltName:
Full=NAD(P)H dehydrogenase I, chain 6; AltName:
Full=NDH-1, chain 6
gi|1001393|dbj|BAA10883.1| NADH dehydrogenase subunit 6 [Synechocystis sp. PCC 6803]
Length = 198
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + +F+ I ++ VV + N +YS F L F++ +G+++LL A+FVA ++VY
Sbjct: 7 VQYISFLILAFLVIGAALGVVLLSNIVYSAFLLGGVFLSISGIYILLNADFVAAAQVLVY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + ++ + S ++ + S ++ +
Sbjct: 67 VGAVSVLILFAIMLVNKREDFSKIPGRWLRNVS--TALVCTGIFALLSTMVLITPWQINE 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
F N + IGK ++ Y P E++ +LL++M+GAI+L R
Sbjct: 125 TGPFVENTLVTIGKHFFSDYLLPFELASVLLLMAMVGAIILARR 168
>gi|9653241|ref|NP_062487.1| NADH dehydrogenase subunit 6 [Chondrus crispus]
gi|1352589|sp|P48924|NU6M_CHOCR RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|1334488|emb|CAA87610.1| NADH dehydrogenase (ubiquinone), subunit 6 [Chondrus crispus]
Length = 204
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 68/198 (34%), Positives = 101/198 (51%), Gaps = 7/198 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FYLFS A+ISS +V+ + N ++SV LI F N AGL LLLG EF + + ++
Sbjct: 1 MNIDIFLFYLFSIFALISSLMVIGLTNAVHSVLFLILVFCNVAGLLLLLGPEFFSFMLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS---- 116
VYVGA+ V FLF++MML+I ++ + ++ + +
Sbjct: 61 VYVGAIAVLFLFVVMMLNIKLKSTNISFSSLWPIGILTFVILLSQFFSSFYELDLVKFQG 120
Query: 117 ---AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ N++ IGKVLYT + I G ILL++MIG IVL + R D+K+
Sbjct: 121 KELFFISWANENSNLTNIKVIGKVLYTHFNLLFLICGLILLVAMIGVIVLTMHQRVDVKK 180
Query: 174 QDISKQLESNPDNSIVMV 191
Q I+ QL N I +
Sbjct: 181 QQIALQLARTAPNVIKFI 198
>gi|158317827|ref|YP_001510335.1| NADH dehydrogenase subunit J [Frankia sp. EAN1pec]
gi|158113232|gb|ABW15429.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Frankia sp.
EAN1pec]
Length = 323
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/197 (23%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++ F+L + +A++++ +V +R+ ++S L+ A +L+ A F+ + ++VY
Sbjct: 19 EAWTFWLLAPVALLAALGMVLMRSAVHSALLLVVNLFCVAVFYLIQDAPFLGFVQIIVYT 78
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-GILAAELIVCASNFMVFSAEGELS 122
GA++V FLF++M++ +D + RG + I G+ A L+ + +
Sbjct: 79 GAIMVLFLFVLMLVGVDSSDSLVETLRGQRIAAVILGLGFAGLLAFPIGRAIDGGKAAGL 138
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
G NV IG++L+TQY + E +L+++ IG +VL R K K+
Sbjct: 139 EAANTGGNVHAIGRLLFTQYVFVFEAISVLLVVAAIGTMVLGHREHTGEK--VTQKERMR 196
Query: 183 NPDNSIVMVKVKSGKGI 199
V + G +
Sbjct: 197 ARFAEGGTVTPRPGPKV 213
>gi|309792511|ref|ZP_07686975.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Oscillochloris trichoides DG6]
gi|308225499|gb|EFO79263.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Oscillochloris trichoides DG6]
Length = 196
Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L S + I ++ +VVTVRN I++ LI +F A L+LLL AEF+A++ ++VYVG
Sbjct: 6 QIIFGLLSALVIGAAMMVVTVRNVIHAALWLIASFFGVAALYLLLEAEFIAVVQVLVYVG 65
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A+ + LF IM+ + K +G+ + + +
Sbjct: 66 AISILILFAIMLTRSNEGDRLLTKYWWASALIALGLFGVAFLPTFTGTTWNMPQPTGPAG 125
Query: 125 VFKG-NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + VE +G+ +++ EI+G +L +++IGAIV+ R +R
Sbjct: 126 TPEVLSGVEELGRGFVSEFVLHFEIAGVLLTVALIGAIVIAFEERSRRRR 175
>gi|297563976|ref|YP_003682949.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
gi|296848425|gb|ADH70443.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nocardiopsis
dassonvillei subsp. dassonvillei DSM 43111]
Length = 349
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/199 (20%), Positives = 85/199 (42%), Gaps = 9/199 (4%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++ F++ + ++ + VV R ++S S+ V A + + A F+ ++ +VVY
Sbjct: 27 EATAFWILGAVVLLGALGVVFSRKAVHSAMSMALTMVGLAIFYGINAAPFLMVVQIVVYT 86
Query: 64 GAVIVFFLFIIMMLDIDIEVA--EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
GAV++ FLF++M++ + + E + + + L + V G
Sbjct: 87 GAVLMLFLFVLMLIGVSSADSLVETLSGQRLMTAVVALCFVGALTTGITRIAVGDPVGLT 146
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
G + I L +Y E +G +L+ +++GA+VL R K++ +++
Sbjct: 147 EGAAAAGGTIPWIAGELLLRYVVAFEATGALLITAVLGAMVLAHTART--KKRRTQREI- 203
Query: 182 SNPDNSIV--MVKVKSGKG 198
++ I G G
Sbjct: 204 --AEDRIRGDHPTPLPGPG 220
>gi|262200412|ref|YP_003271620.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Gordonia
bronchialis DSM 43247]
gi|262083759|gb|ACY19727.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Gordonia
bronchialis DSM 43247]
Length = 269
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 5/176 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A++ + VV +YS L + A ++ GA F+ ++ +VV
Sbjct: 14 TGEAVQFWVLGGVAVLGALGVVFATKAVYSAIFLATTMIILAIFYVAQGALFLGVVQVVV 73
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-----GILAAELIVCASNFMVFS 116
Y GAV++ FLF++M++ +D + RG + + GIL I AS
Sbjct: 74 YTGAVMMLFLFVLMLIGVDSSDSLVETLRGQRLAAAVIGLGFGILLIAGIGTASVATFAG 133
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
A NVE I ++++ QY + E++G +L+ + +GA+VL R R +
Sbjct: 134 APAAGGSSTAGDGNVEAIAELIFVQYLWAFELTGALLITATLGAMVLAHRERFGPR 189
>gi|87123594|ref|ZP_01079445.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Synechococcus sp. RS9917]
gi|86169314|gb|EAQ70570.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Synechococcus sp. RS9917]
Length = 200
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q + F + + +I + VV + N +YS F L F+ AGL+LLL A FVA ++VYV
Sbjct: 8 QLICFVALAAVVVIGALGVVLLSNIVYSAFLLGGVFLAVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++A + + + A L ++ +
Sbjct: 68 GAVNVLILFAIMLVNKREDLAP--IQGLPIRRLLSAGVCAGLFALLVRVVITTPWAVPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
E IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 126 AAIGEGATERIGEHLFTDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|326382754|ref|ZP_08204444.1| NADH:ubiquinone oxidoreductase subunit J [Gordonia neofelifaecis
NRRL B-59395]
gi|326198344|gb|EGD55528.1| NADH:ubiquinone oxidoreductase subunit J [Gordonia neofelifaecis
NRRL B-59395]
Length = 282
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/211 (19%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F++ + +I + VV +YS L + A +++ GA F+ ++ +VVY
Sbjct: 17 EAVTFWVLGAVVVIGALGVVLSPKAVYSAVFLAMTMIILAVFYVMQGALFLGVVQVVVYT 76
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA----SNFMVFSAEG 119
GAV++ FLF++M++ +D + RG + L +++ A + VF
Sbjct: 77 GAVMMLFLFVLMLIGVDSSESLVESIRGQRLAAAGLGLGFAVLLIAAIGSATLAVFVGAP 136
Query: 120 ELSRLVFKGNN-----------VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ S G + + ++++ +Y + E++G +L+ + +GA+VL R R
Sbjct: 137 DFSHGTAPGGPSTELRTGGNQNIRALAELIFGRYLWAFELTGALLITATLGAMVLAHRQR 196
Query: 169 RDIKRQDISKQLESNPDNSIVMVKVKSGKGI 199
+ + ++ +S G+
Sbjct: 197 FGPR--NGQREQSVERFSSGAHATPLPPPGV 225
>gi|312139317|ref|YP_004006653.1| NADH dehydrogenase (quinone) chain j nuoj [Rhodococcus equi 103S]
gi|325676674|ref|ZP_08156349.1| NADH-quinone oxidoreductase subunit J [Rhodococcus equi ATCC 33707]
gi|311888656|emb|CBH47968.1| NADH dehydrogenase (quinone) chain J NuoJ [Rhodococcus equi 103S]
gi|325552529|gb|EGD22216.1| NADH-quinone oxidoreductase subunit J [Rhodococcus equi ATCC 33707]
Length = 276
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/210 (23%), Positives = 98/210 (46%), Gaps = 12/210 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ A++ + VV +YS L + A L++ GA F+ ++ +VV
Sbjct: 22 TGEAVQFWILGTAAVLGALGVVCAPKAVYSAICLAMTMIVLAVLYIAQGALFLGVVQVVV 81
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI---------VCASNF 112
Y GAV++ FLF++M++ +D + RG + + L L+ V
Sbjct: 82 YTGAVMMLFLFVLMLIGVDSSDSLVETLRGQRIAAVVAGLGFGLLLIGGLGNATVGVLRS 141
Query: 113 MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
G G NVE I ++++ +Y + E++G +L+ + IGA+VL R R + +
Sbjct: 142 GEVGFVGLDQANSASGGNVEGIAELVFIRYVWVFEMTGALLITATIGAMVLAHRERFERR 201
Query: 173 --RQDISKQLESNP-DNSIVMVKVKSGKGI 199
++++SKQ + + V G+
Sbjct: 202 LGQREMSKQRFRDWGADESARVTPLPSPGV 231
>gi|56791566|gb|AAW30321.1| NADH dehydrogenase subunit 6 [Philodendron hederaceum var.
oxycardium]
Length = 182
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F AMI VV++GA+
Sbjct: 1 VLSSPALVSGLMVVRAKNPVHSVSFPIPVFRDTSGLLILLGLDFSAMIFPVVHIGAIAAS 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM +I I R S IG++ +
Sbjct: 61 FLFVVMMFNIQIAETHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTHRNTTSLRY 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ +
Sbjct: 121 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFR 180
Query: 179 QL 180
+
Sbjct: 181 RN 182
>gi|88809900|ref|ZP_01125406.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 7805]
gi|88786284|gb|EAR17445.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 7805]
Length = 199
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q + F + S + ++ + VV + N +YS F L F+ AGL+LLL A FVA ++VYV
Sbjct: 8 QLISFLVLSAVIVLGALGVVLLSNIVYSAFLLGGVFLAVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++A G + + +V +
Sbjct: 68 GAVNVLILFAIMLVNKREDLAP---IPGIAVRRLLSGGVCAGLFVLLTRVVLTTPWAEGP 124
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 125 EPIGEGATIRIGEHLFTDYLLPFELASVLLLMAMIGAIVLARR 167
>gi|148240625|ref|YP_001226012.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 7803]
gi|147849164|emb|CAK24715.1| NAD(P)H-quinone oxidoreductase chain 6 [Synechococcus sp. WH 7803]
Length = 199
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 3/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q + F + S + ++ + VV + N +YS F L F+ AGL+LLL A FVA ++VYV
Sbjct: 8 QLISFLVLSAVIVLGALGVVLLSNIVYSAFLLGGVFLAVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++A G + + +V +
Sbjct: 68 GAVNVLILFAIMLVNKREDLAP---IPGIAVRRLLSGGVCAGLFVLLTRVVLTTPWAQGP 124
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 125 EPIGEGATIRIGEHLFTDYLLPFELASVLLLMAMIGAIVLARR 167
>gi|302035983|ref|YP_003796305.1| NADH-quinone oxidoreductase membrane subunit J [Candidatus
Nitrospira defluvii]
gi|300604047|emb|CBK40379.1| NADH-quinone oxidoreductase, membrane subunit J [Candidatus
Nitrospira defluvii]
Length = 206
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 58/164 (35%), Positives = 95/164 (57%), Gaps = 2/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M +FF+ F+ + +S LVV +RNP+YS SL+ F + AGL++ L AEF+A + +VVY
Sbjct: 38 MDHIFFFYFAAVIAATSLLVVALRNPVYSALSLLIMFFHVAGLYVTLHAEFLAAVQIVVY 97
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V +LF++M+L I E + + +L E+I+ +A +
Sbjct: 98 AGAILVLYLFVVMLLSIKS--EERYHSQLPVAGLLGVMLCTEVILLFIQSRTGAAAPAAA 155
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ N E IG+ LY+ Y +P E++ ILL++MIGAI+L +
Sbjct: 156 DPIAGPGNTEMIGEALYSTYLFPFEVASLILLVAMIGAIILAKK 199
>gi|119485497|ref|ZP_01619825.1| NADH dehydrogenase subunit J [Lyngbya sp. PCC 8106]
gi|119457253|gb|EAW38379.1| NADH dehydrogenase subunit J [Lyngbya sp. PCC 8106]
Length = 232
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 81/164 (49%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F L + M + + VV + N +YS F L F++ AGL++LL A+FVA +++Y
Sbjct: 31 VQIISFGLLTVMMLGGALGVVLLENIVYSAFLLGGVFMSMAGLYILLNADFVAAAQVLIY 90
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VG+V V LF IM+++ G+ + ++
Sbjct: 91 VGSVNVLILFGIMLVNKQESFKALPNPWVRKGATALVCSGLFALLSTMVLSTPWMSQATV 150
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ + +++ IG+ +T + P E++ LL++M+GAI+L R
Sbjct: 151 SVPPEESSIMIIGQHFFTDFLLPFELASVFLLMAMVGAIILARR 194
>gi|218245873|ref|YP_002371244.1| NADH dehydrogenase subunit J [Cyanothece sp. PCC 8801]
gi|257058921|ref|YP_003136809.1| NADH dehydrogenase subunit J [Cyanothece sp. PCC 8802]
gi|218166351|gb|ACK65088.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Cyanothece
sp. PCC 8801]
gi|256589087|gb|ACU99973.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Cyanothece
sp. PCC 8802]
Length = 206
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 91/164 (55%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + S + I ++ VV + N +YS F L F++ +G+++LL A+FVA +++Y
Sbjct: 7 VQIVSFAILSVLVIAAALGVVLLSNIVYSAFLLGGVFISISGIYILLNADFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + ++ G+ + + +++ + + S
Sbjct: 67 VGAVNVLILFGIMLVNKQEDFSTLPRRWIRQGATALVCVGIFILLSTMILVTPWSISTTS 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
V + +E +GK ++ + P E++ +LL++M+GAI+L R
Sbjct: 127 PGVIENTIIE-LGKHFFSDFLLPFELASVLLLMAMVGAIILARR 169
>gi|162279922|ref|NP_064048.2| NADH dehydrogenase subunit 6 [Beta vulgaris subsp. vulgaris]
gi|323435072|ref|YP_004222290.1| NADH dehydrogenase subunit 6 [Beta vulgaris subsp. maritima]
gi|87248042|gb|ABD36075.1| NADH dehydrogenase subunit 6 [Beta vulgaris subsp. vulgaris]
gi|148491425|dbj|BAA99358.2| NADH dehydrogenase subunit 6 [Beta vulgaris subsp. vulgaris]
gi|317905725|emb|CBJ14110.1| NADH dehydrogenase subunit 6 [Beta vulgaris subsp. maritima]
gi|319439805|emb|CBJ17517.1| NADH dehydrogenase subunit 6 [Beta vulgaris subsp. maritima]
Length = 205
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S +VV +NP++SV I F N +GL LLLG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSLALVSGLMVVRAKNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIFLVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|307101736|ref|YP_003875484.1| NADH dehydrogenase subunit 6 [Silene latifolia]
gi|301338031|gb|ADK73323.1| NADH dehydrogenase subunit 6 [Silene latifolia]
Length = 205
Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S +VV +NP++SV I F N +GL LLLG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSLALVSGLMVVRAKNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIFLVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|327325777|gb|EGE67569.1| NADH dehydrogenase I, J subunit [Propionibacterium acnes HL103PA1]
Length = 284
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + ++++ ++V + P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--------NFM 113
Y GA+++ FLF++M++ +D + +G + I LA +++ +
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNTVTTDVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G GNNV+++ ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDHPVGLGQANAAGGNNVKSLAELVFTKYVLVFEATSALLITAAVGTMVLAHGEADKKKS 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + ++ V+ G+
Sbjct: 196 QRERVTDRMAAYAEHGSH-PGVRPNSGV 222
>gi|323398669|ref|YP_004222744.1| NADH dehydrogenase subunit 6 [Glaucocystis nostochinearum]
gi|321401362|gb|ADW83116.1| NADH dehydrogenase subunit 6 [Glaucocystis nostochinearum]
Length = 249
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 72/221 (32%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ FF LFSF+A+ SS + +T +NPI+SVF LI F N GL +LL AEF+AM+ LVV
Sbjct: 29 SIEYTFFILFSFLALFSSIIAITSKNPIHSVFYLILVFFNVTGLLILLNAEFLAMLILVV 88
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAE------------------------------PRKKRG 91
Y+GA+ V FLF++MML+I + P
Sbjct: 89 YLGAIAVLFLFVVMMLNIKYITLKQITYKNFFFEFFIFLLLFLEVFLLTENNVLPNIINF 148
Query: 92 FLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGF 151
F F I ++ F + +L ++ V+Y Y Y ++GF
Sbjct: 149 FDMKFLTNIEKYLDVINNLYFKYYKTSLDLGSFDNSLYTNAHLFGVIYISYLYYFFMAGF 208
Query: 152 ILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVK 192
ILL++MIGAIVL L R ++++Q I Q+ + ++V+ K
Sbjct: 209 ILLIAMIGAIVLTLHRRPNVRKQQIIDQITRDFKAAVVLRK 249
>gi|164421028|ref|YP_001648479.1| NADH dehydrogenase subunit 6 [Aplysina fulva]
gi|158668077|gb|ABW76540.1| NADH dehydrogenase subunit 6 [Aplysina fulva]
Length = 190
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 68/184 (36%), Positives = 99/184 (53%), Gaps = 7/184 (3%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F+LF + S +V++ NP++SV LI AF NA+ LF+LL EF+A+I L++YVGA+
Sbjct: 4 LFFLFGVNVLFSGIMVISALNPVHSVLWLIVAFTNASALFILLNVEFIALIFLIIYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN-------FMVFSAEG 119
+ FLF+IMML++ L IGI+ I N ++SA
Sbjct: 64 AILFLFVIMMLNLADLGGSEDMSNYLLAGLIIGIVFLFEIWIWQNHQETPPMAFIYSAGI 123
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
N+E IG++LYT+ Y ++ F+LL++MIGAIVL +IKRQDI Q
Sbjct: 124 NYWDYTAAYTNIEIIGRILYTELYYLFIVASFVLLVAMIGAIVLTHDMGTEIKRQDIFIQ 183
Query: 180 LESN 183
Sbjct: 184 TSRQ 187
>gi|194033221|ref|YP_002000558.1| NADH dehydrogenase subunit 6 [Oryza sativa Japonica Group]
gi|60498739|dbj|BAC19862.2| NADH dehydrogenase subunit 6 [Oryza sativa Japonica Group]
Length = 205
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + AGL +LLG +F AMI LV+Y+GA+ V
Sbjct: 5 VLSSFALVSGLMVVRAKNPVHSVLFFILIFCDTAGLLILLGLDFFAMIFLVIYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM +I I R S IG++ +
Sbjct: 65 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N++ +G +LYT Y +S ILL++MIGAIVL + ++RQD+ +
Sbjct: 125 TVYAGKVRNWTNLDTLGNLLYTYYFVWFLVSTLILLVAMIGAIVLTMHRTTKVQRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNALDFRRTI 194
>gi|325954443|ref|YP_004238103.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Weeksella
virosa DSM 16922]
gi|323437061|gb|ADX67525.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Weeksella
virosa DSM 16922]
Length = 171
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 98/169 (57%), Gaps = 1/169 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ + FY+ + + ++S+ L+V RNPI+S+ LI F +G ++LL A+F+A++ ++
Sbjct: 1 MTIEEILFYVLAGLTVLSALLMVFSRNPIHSILYLIITFFCISGHYILLNAQFLAVVNII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA++V FLF++M+++++ E + + +L ++ + + +
Sbjct: 61 VYAGAIMVLFLFVVMLMNLNSEKKSFGTPIKITVASLVSLLFI-ILTVGIITENGTPQTQ 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + +EN+G VLY++Y P E+S + + +MIGA++L + +
Sbjct: 120 VEMAKGEIGLIENLGSVLYSEYVLPFELSSILFISAMIGAVILSKKDKE 168
>gi|282855265|ref|ZP_06264597.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes J139]
gi|282581853|gb|EFB87238.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes J139]
gi|314983069|gb|EFT27161.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL110PA3]
gi|315090602|gb|EFT62578.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL110PA4]
gi|315093911|gb|EFT65887.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL060PA1]
gi|315104130|gb|EFT76106.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL050PA2]
Length = 284
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + ++++ ++V + P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--------NFM 113
Y GA+++ FLF++M++ +D + +G + I LA +++ +
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNAVTTDVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G GNNV+++ ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDHPVGLGQANAAGGNNVKSLAELVFTKYVLVFEATSALLITAAVGTMVLAHGEADKKKS 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + ++ V+ G+
Sbjct: 196 QRERVTDRMAAYAEHGSH-PGVRPNSGV 222
>gi|57239208|ref|YP_180344.1| NADH-quinone oxidoreductase chain J [Ehrlichia ruminantium str.
Welgevonden]
gi|58579166|ref|YP_197378.1| NADH-quinone oxidoreductase chain J [Ehrlichia ruminantium str.
Welgevonden]
gi|58617219|ref|YP_196418.1| NADH-quinone oxidoreductase chain J [Ehrlichia ruminantium str.
Gardel]
gi|57161287|emb|CAH58208.1| NADH-quinone oxidoreductase chain J [Ehrlichia ruminantium str.
Welgevonden]
gi|58416831|emb|CAI27944.1| NADH-quinone oxidoreductase chain J [Ehrlichia ruminantium str.
Gardel]
gi|58417792|emb|CAI26996.1| NADH-quinone oxidoreductase chain J [Ehrlichia ruminantium str.
Welgevonden]
Length = 200
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 77/200 (38%), Positives = 119/200 (59%), Gaps = 9/200 (4%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FF+ F+ + I+SS V+ V NP+YSV LI F ++ LF+LLGAE +AM+ ++VY
Sbjct: 1 MIYFFFHFFAVLVILSSIAVIYVSNPVYSVLFLILTFFMSSTLFILLGAELIAMLVIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL- 121
VGAV V FLF++MMLDI+ R K GF F IG+++ ++ F++ +
Sbjct: 61 VGAVAVLFLFVVMMLDINY----SRFKHGFTKYFVIGLISGMILFVNMVFIIKHSATADL 116
Query: 122 -SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR-RDIKRQDISKQ 179
+ +NV IG ++YT+Y Y +SG +LL+S+IG++VL LR + +I+RQ Q
Sbjct: 117 VTESKPYVSNVMAIGNLIYTKYMYIFHLSGVLLLISIIGSLVLTLRDKGNNIRRQSPDIQ 176
Query: 180 LESNPDNSIVMVKVKSGKGI 199
+ +P + V VK G+
Sbjct: 177 ISRSPF--VKYVDVKVRGGV 194
>gi|44889032|sp|P60497|NU6M_ARATH RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
Length = 205
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S +VV +NP++SV I F + +GL LLLG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSLALVSGLMVVRAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|314965049|gb|EFT09148.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL082PA2]
Length = 284
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + ++++ ++V + P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI--------VCASNFM 113
Y GA+++ FLF++M++ +D + +G + I LA ++ V
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALALVVLLILAVGNAVTTDVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G GNNV+++ ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDHPVGLGQANAAGGNNVKSLAELVFTKYVLVFEATSALLITAAVGTMVLAHGEADKKKS 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + ++ V+ G+
Sbjct: 196 QRERVTDRMAAYAEHGSH-PGVRPNSGV 222
>gi|11465629|ref|NP_049300.1| NADH dehydrogenase subunit 6 [Porphyra purpurea]
gi|4106936|gb|AAD03103.1| NADH dehydrogenase subunit 6 [Porphyra purpurea]
Length = 209
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 69/209 (33%), Positives = 113/209 (54%), Gaps = 14/209 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ F++FS ++++S+ LVV++ N +YSV LI F N A + LLLGAEF++ + L+V
Sbjct: 1 MTSITLFWIFSIISLLSACLVVSLANAVYSVLFLIIVFCNTASILLLLGAEFLSFLFLIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF--------- 112
YVGA+ V FLF++MML++ I+ A+ L F I + A
Sbjct: 61 YVGAIAVLFLFVVMMLNVKIDGAKVNYTTILLIGFLISSILLFQFSSAMQIDLDAYSNIR 120
Query: 113 -----MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ F ++ +NVE+IG VLYT Y+ + FILLL+MIG+I+L +
Sbjct: 121 LNLTEVNFPTTTLWTQENSLPSNVESIGLVLYTSYSLVFILCAFILLLAMIGSIILTMNQ 180
Query: 168 RRDIKRQDISKQLESNPDNSIVMVKVKSG 196
R +K+Q I+ QL + + + + ++
Sbjct: 181 RNGVKKQQITLQLHRDQNKVVRFLDLRKN 209
>gi|83416415|gb|ABC18241.1| NADH dehydrogenase subunit 6 [Brassica oleracea var. botrytis]
Length = 201
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL LLLG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|110637778|ref|YP_677985.1| NADH dehydrogenase I subunit J [Cytophaga hutchinsonii ATCC 33406]
gi|110280459|gb|ABG58645.1| NADH dehydrogenase subunit J [Cytophaga hutchinsonii ATCC 33406]
Length = 169
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 95/168 (56%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M ++ FY+ S + + S+ V+ +NP+YSV SL+ F G LLL A+F+A++ ++VY
Sbjct: 1 MGNILFYILSGITLCSALFVILSKNPVYSVLSLVITFCCITGHMLLLSADFLAVVNIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF+IMML+++ A+P K + + + + ++S
Sbjct: 61 AGAIMVLFLFVIMMLNLNDAAAQPNKPFLSKLAACVSGGLLLISLVYLLKGYQVGSIDMS 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+L + + +GK+L+ Q+ P EI+ + L +MIGA++L + +D
Sbjct: 121 KLDHNFGSAQELGKILFNQFILPFEITSVLFLSAMIGAVMLGKKDLKD 168
>gi|112253907|ref|YP_717162.1| NADH dehydrogenase subunit 6 [Brassica napus]
gi|37591109|dbj|BAC98911.1| NADH dehydrogenase subunit 6 [Brassica napus]
Length = 205
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S +VV +NP++SV I F + +GL LLLG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSLALVSGLMVVRAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|581746|emb|CAA44376.1| NDHG [Synechocystis sp. PCC 6803]
Length = 202
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 88/163 (53%), Gaps = 2/163 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + +F+ I ++ VV + N +YS F L F++ +G+++LL A+FVA ++VY
Sbjct: 7 VQYISFLILAFLVIGAALGVVLLSNIVYSAFLLGGVFLSISGIYILLNADFVAAAQVLVY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + ++ + S ++ + S ++ +
Sbjct: 67 VGAVSVLILFAIMLVNKREDFSKIPGRWLRNVS--TALVCTGIFALLSTMVLITPWQINE 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
F N + IGK ++ Y P E++ +LL++M+GAI+L
Sbjct: 125 TGPFVENTLVTIGKHFFSDYLLPFELASVLLLMAMVGAIILAR 167
>gi|116073962|ref|ZP_01471224.1| NADH dehydrogenase subunit J [Synechococcus sp. RS9916]
gi|116069267|gb|EAU75019.1| NADH dehydrogenase subunit J [Synechococcus sp. RS9916]
Length = 200
Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q + F + + + I + VV + N +YS F L F+ AGL+LLL A FVA ++VYV
Sbjct: 8 QLICFLVLASVVAIGALGVVLLSNIVYSAFLLGGVFMAVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++A K G + A L + +
Sbjct: 68 GAVNVLILFAIMLVNKREDLAP--IKGLQTRRLISGGVCAGLFALLVRVALTTPWAVPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 126 AAVGEDATVRIGEHLFTDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|56416877|ref|YP_153951.1| NADH dehydrogenase chain J [Anaplasma marginale str. St. Maries]
gi|222475242|ref|YP_002563658.1| NADH dehydrogenase I chain J (nuoJ) [Anaplasma marginale str.
Florida]
gi|254995065|ref|ZP_05277255.1| NADH dehydrogenase I chain J (nuoJ) [Anaplasma marginale str.
Mississippi]
gi|255003226|ref|ZP_05278190.1| NADH dehydrogenase I chain J (nuoJ) [Anaplasma marginale str.
Puerto Rico]
gi|255004354|ref|ZP_05279155.1| NADH dehydrogenase I chain J (nuoJ) [Anaplasma marginale str.
Virginia]
gi|56388109|gb|AAV86696.1| NADH dehydrogenase chain J [Anaplasma marginale str. St. Maries]
gi|222419379|gb|ACM49402.1| NADH dehydrogenase I chain J (nuoJ) [Anaplasma marginale str.
Florida]
Length = 200
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 65/198 (32%), Positives = 111/198 (56%), Gaps = 3/198 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M S F+ F+ +A++S+ VV + NP+YSV SLI F ++ +F++LGAE VAM+ ++VY
Sbjct: 1 MLSFLFFCFAGVAVLSAVGVVLLPNPVYSVLSLILTFFVSSAVFIMLGAELVAMLLVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLDI + + + L +V + SA
Sbjct: 61 VGAVAVLFLFVVMMLDISRVGSRHGLVKHYPLGVACMFLFFGCMVYSVFHAKSSAVDGSG 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD-IKRQDISKQLE 181
+NV IG LYT+YAY +++G +LL++ +G+++L++ +QD+ +Q+
Sbjct: 121 SGFGSVDNVFLIGLQLYTEYAYAFQLAGVLLLIAGVGSLILIVGGSSGRSLKQDVGQQVG 180
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ I ++ + G G+
Sbjct: 181 R--SSRIKLLSPEVGVGV 196
>gi|115494865|ref|YP_778635.1| NADH dehydrogenase subunit 6 [Chrysopathes formosa]
gi|82792226|gb|ABB90975.1| NADH dehydrogenase subunit 6 [Chrysopathes formosa]
Length = 210
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 24/208 (11%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY +F AI S +V++ NP++S+F L+ AF ++A LF+LLG +F+A+I L++Y
Sbjct: 1 MILICFYTLAFGAIASGIMVISALNPVHSIFWLVVAFTSSAALFILLGVDFIALIFLIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------ 116
VGA+ + FLF+IM+L++ R + ++ I A + S
Sbjct: 61 VGAIAILFLFVIMLLNLTDFPPAFRLGGEADMTNYVPIGLAIGTLLFSEVASSWLIMSGP 120
Query: 117 --------------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIV 162
+ + K +N+E IG++LYT Y Y ++ FILL+++IGAIV
Sbjct: 121 YVHRGSFRAEIGSSWDLANPWFLIKYHNIEAIGRILYTDYYYIFILASFILLVALIGAIV 180
Query: 163 LMLRHRRDI----KRQDISKQLESNPDN 186
L ++ K+QDI Q +
Sbjct: 181 LTQEIGSEVGPTAKKQDIFFQTSRAQEE 208
>gi|239811642|gb|ACS27129.1| NADH dehydrogenase subunit 6 [Heterosigma akashiwo]
gi|239811682|gb|ACS27168.1| NADH dehydrogenase subunit 6 [Heterosigma akashiwo]
gi|288871938|dbj|BAI70624.1| NADH dehydrogenase subunit 6 [Heterosigma akashiwo]
Length = 204
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 110/203 (54%), Gaps = 11/203 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + FFYLF+ + +IS+F+ +TV NP++SV LI FV +A + LL+ EF++++ +++
Sbjct: 1 MSEFTFFYLFAGLILISAFMTITVSNPVHSVLFLILVFVGSAAVLLLMEVEFLSLMFIII 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ V FLF++MMLDI + + R F+G L VF+ + +
Sbjct: 61 YVGAIAVLFLFVVMMLDIKLSSSNNNYLRYLSIGGFLGFLFFVETYYLVETSVFAPQVDS 120
Query: 122 SRLVFKG-----------NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
S ++ N+E +G+ LYT Y + I+G +LL+ MIGAIVL L
Sbjct: 121 SLVLESSYQDWITRLDTLTNMECLGQFLYTYYFFHFLIAGIVLLVGMIGAIVLTLHVNHT 180
Query: 171 IKRQDISKQLESNPDNSIVMVKV 193
K Q I KQL N+ + +
Sbjct: 181 SKNQLICKQLSRQVKNATFLTTI 203
>gi|266679|sp|Q00243|NU6C_PLEBO RecName: Full=NAD(P)H-quinone oxidoreductase chain 6; AltName:
Full=NAD(P)H dehydrogenase I, chain 6; AltName:
Full=NDH-1, chain 6
gi|441181|dbj|BAA00816.1| NADH-ubiquinone oxidoreductase chain 6 homolog [Leptolyngbya
boryana IAM M-101]
Length = 199
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + M I S+ VV + N +YS F L F++ AGL+LLL A+FVA +++Y
Sbjct: 7 VQIVSFAILAAMMIGSAIGVVLLENVVYSAFLLGGVFISIAGLYLLLNADFVAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ K + L I + MV + +S
Sbjct: 67 VGAVNVLILFAIMLVNKREAFQPIAKSWIRRAAT---ALVCAGIFALLSAMVLTTPWAIS 123
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V +++ IG +T + P E++ +LL++++GAIVL R
Sbjct: 124 TAVPIESSIITIGLHFFTDFLLPFELASILLLMALVGAIVLARRE 168
>gi|318040628|ref|ZP_07972584.1| NADH:ubiquinone oxidoreductase subunit J [Synechococcus sp. CB0101]
Length = 199
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q + F + S + I + VV + N +YS F L F++ AGL+LLL A FVA ++VYV
Sbjct: 8 QLICFTVLSAVVAIGALGVVLLPNIVYSAFLLGGVFLSVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++A + G + A L +
Sbjct: 68 GAVNVLILFAIMLVNKKEDLAA--IPGLAVRRLLSGAVCAGLFALLLRVAFTTPWATPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
IG+ L++ Y P E++ +LL++MIGAIVL R
Sbjct: 126 EPVGEEATIRIGEHLFSDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|307152385|ref|YP_003887769.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Cyanothece
sp. PCC 7822]
gi|306982613|gb|ADN14494.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Cyanothece
sp. PCC 7822]
Length = 204
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/195 (26%), Positives = 100/195 (51%), Gaps = 2/195 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + I ++ VV + N +YS F L F++ AG+++LL A+FVA +++Y
Sbjct: 7 VQIVSFLILAGFLITAALGVVLLSNIVYSAFLLAGVFLSIAGIYILLNADFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + ++ + + L ++ + + S
Sbjct: 67 VGAVNVLILFAIMLVNKQEDFKTVPRRWIRQIATGLVCLGLFALLGTMILITPWSINSTS 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR-RDIKRQDISKQLE 181
V + VE IGK ++ + P E++ +LL++M+GAI+L R ++K +
Sbjct: 127 PAVVENTLVE-IGKHFFSDFLLPFELASILLLMAMVGAIILARRDFIPELKSSEPGTTAL 185
Query: 182 SNPDNSIVMVKVKSG 196
+ P+ ++ ++SG
Sbjct: 186 TLPERPRELISLESG 200
>gi|314923985|gb|EFS87816.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL001PA1]
Length = 284
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + ++++ ++V + P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--------NFM 113
Y GA+++ FLF++M++ +D + +G + I LA +++ +
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNAVTTDVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G GNNV+++ ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDHPVGLGQANAAGGNNVKSLAELVFTKYVLVFEATSALLITAAVGTMVLAHGEADKKKS 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + ++ V+ G+
Sbjct: 196 QRERVTDRMAAYAEHGSH-PGVRPNSGV 222
>gi|33860718|ref|NP_892279.1| NADH dehydrogenase subunit J [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|33633660|emb|CAE18617.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 199
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q + F + S + II + V+ + N +YS F L F++ AGL+LLL A FVA ++V
Sbjct: 6 TTQIICFSVLSLVVIIGALGVILLENIVYSAFLLGGVFMSVAGLYLLLNASFVAAAQVLV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V +F IM+++ E + I L + + +
Sbjct: 66 YVGAVNVLIIFAIMLVN-KKEDLKAIANIKSRRIISTSICLTLLSLLIRVDLSNTWGLAE 124
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ IG+ L++ Y P E++ +LL++MIGAIVL R D+ +DIS L
Sbjct: 125 PNASIGEESTVRIGEHLFSDYLLPFEVASVLLLMAMIGAIVLARR---DVMNEDISTGLP 181
Query: 182 SNPD 185
+ +
Sbjct: 182 VDQE 185
>gi|84494921|ref|ZP_00994040.1| NADH dehydrogenase subunit J [Janibacter sp. HTCC2649]
gi|84384414|gb|EAQ00294.1| NADH dehydrogenase subunit J [Janibacter sp. HTCC2649]
Length = 269
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ + +A++ + ++ R +++ + + +L GA+F+ +I + V
Sbjct: 4 TGEAILFWVLAPLAVVGALGLIFARKAVHAALGMALTMIILGVFYLAQGADFLGVIQIFV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI---GILAAELIVCASNFMVFSAE 118
Y GAV++ FLF++M++ +D + +G + + G+ A + + +
Sbjct: 64 YTGAVMMLFLFVVMLVGVDSSDSIVETLKGQRAAATVLTLGLGALLMGAIGRITIGDAPA 123
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+L + NV + ++++ +Y + E + +L+ + + A+VL R R +
Sbjct: 124 NKLDAINTDKGNVSGVAELIFGRYVWVFEATSALLITAALAAMVLAHRERLGSR 177
>gi|327333131|gb|EGE74858.1| NADH dehydrogenase I, J subunit [Propionibacterium acnes HL097PA1]
Length = 284
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + ++++ ++V + P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA--------SNFM 113
Y GA+++ FLF++M++ +D + +G + I LA +++
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNAVTTGVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G GNNV+++ ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDHPVGLGQANAAGGNNVKSLAELVFTKYVIVFEATSALLITAAVGTMVLAHGEADKKKS 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + ++ V+ G+
Sbjct: 196 QRERVTDRMAAYAEHGSH-PGVRPNSGV 222
>gi|320148706|emb|CBJ23344.1| NADH dehydrogenase subunit 6 [Beta vulgaris subsp. maritima]
Length = 205
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S +VV +NP++SV I F N +GL LLLG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSLALVSGLMVVRAQNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIFLVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|54606785|dbj|BAD66808.1| NADH dehydrogenase subunit 6 [Beta vulgaris subsp. vulgaris]
Length = 205
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F N +GL LLLG +F AMI VVY+GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFSAMIFPVVYIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDSRRTI 194
>gi|282900718|ref|ZP_06308660.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Cylindrospermopsis raciborskii CS-505]
gi|281194518|gb|EFA69473.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Cylindrospermopsis raciborskii CS-505]
Length = 202
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+QS+ F + M I ++ VV N +YS F L F++ AGL+LLL +FVA +++Y
Sbjct: 7 VQSVSFGILGAMMIGAALGVVLFSNIVYSAFLLGGVFISMAGLYLLLNGDFVAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF IM+++ + A G+++ L S ++ + G +
Sbjct: 67 VGAINVLILFAIMLVNKRQDFAVIPSAGL--RKIVTGVVSLGLFALLSAMVLATPWGNTT 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
N+V IG+ L++ + P E++ +LL++M+GAI+L R
Sbjct: 125 TPPATQNSVVVIGEHLFSDFLLPFELASILLLIAMVGAIILARRE 169
>gi|78183864|ref|YP_376298.1| NADH dehydrogenase subunit J [Synechococcus sp. CC9902]
gi|116071524|ref|ZP_01468792.1| NADH dehydrogenase subunit J [Synechococcus sp. BL107]
gi|78168158|gb|ABB25255.1| NADH dehydrogenase I chain 6 [Synechococcus sp. CC9902]
gi|116065147|gb|EAU70905.1| NADH dehydrogenase subunit J [Synechococcus sp. BL107]
Length = 200
Score = 104 bits (260), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F + S + + + VV + N +YS F L F+ AGL+LLL A FVA +++YV
Sbjct: 8 ELICFLVLSAVVVTGALGVVLLSNIVYSAFLLGGVFMAVAGLYLLLNASFVAAAQVMIYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GA+ V LF IM+++ ++ G + L+ +V +
Sbjct: 68 GAINVLILFAIMLVNKREDL--KAIANLTTRRIVSGGVCLGLLALLVRVVVTTPWSLPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 126 AAVGEEATARIGEHLFTDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|289425611|ref|ZP_06427383.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes SK187]
gi|289427016|ref|ZP_06428735.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes J165]
gi|289153912|gb|EFD02605.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes SK187]
gi|289159838|gb|EFD08023.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes J165]
gi|313763293|gb|EFS34657.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL013PA1]
gi|313802890|gb|EFS44103.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL110PA2]
gi|313806336|gb|EFS44852.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL087PA2]
gi|313813683|gb|EFS51397.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL025PA1]
gi|313814967|gb|EFS52681.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL059PA1]
gi|313819447|gb|EFS57161.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL046PA2]
gi|313821253|gb|EFS58967.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL036PA1]
gi|313822292|gb|EFS60006.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL036PA2]
gi|313826150|gb|EFS63864.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL063PA1]
gi|313829361|gb|EFS67075.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL063PA2]
gi|313838158|gb|EFS75872.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL086PA1]
gi|314916747|gb|EFS80578.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL005PA4]
gi|314919127|gb|EFS82958.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL050PA1]
gi|314921207|gb|EFS85038.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL050PA3]
gi|314925999|gb|EFS89830.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL036PA3]
gi|314930365|gb|EFS94196.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL067PA1]
gi|314956148|gb|EFT00544.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL027PA1]
gi|314959681|gb|EFT03783.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL002PA1]
gi|314962255|gb|EFT06356.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL002PA2]
gi|314963231|gb|EFT07331.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL082PA1]
gi|314969774|gb|EFT13872.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL037PA1]
gi|314979340|gb|EFT23434.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL072PA2]
gi|314986328|gb|EFT30420.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL005PA2]
gi|314988575|gb|EFT32666.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL005PA3]
gi|315079692|gb|EFT51680.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL053PA2]
gi|315083917|gb|EFT55893.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL027PA2]
gi|315085054|gb|EFT57030.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL002PA3]
gi|315089483|gb|EFT61459.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL072PA1]
gi|315098095|gb|EFT70071.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL059PA2]
gi|315102687|gb|EFT74663.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL046PA1]
gi|315108829|gb|EFT80805.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL030PA2]
gi|327325718|gb|EGE67515.1| NADH dehydrogenase I, J subunit [Propionibacterium acnes HL096PA3]
gi|327447749|gb|EGE94403.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL013PA2]
gi|327451640|gb|EGE98294.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL087PA3]
gi|327452293|gb|EGE98947.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL083PA2]
gi|328752126|gb|EGF65742.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL025PA2]
gi|328755070|gb|EGF68686.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL020PA1]
gi|328757018|gb|EGF70634.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL087PA1]
Length = 284
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + ++++ ++V + P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA--------SNFM 113
Y GA+++ FLF++M++ +D + +G + I LA +++
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNAVTTGVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G GNNV+++ ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDHPVGLGQANTAGGNNVKSLAELVFTKYVIVFEATSALLITAAVGTMVLAHGEADKKKS 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + ++ V+ G+
Sbjct: 196 QRERVTDRMAAYAEHGSH-PGVRPNSGV 222
>gi|296130542|ref|YP_003637792.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Cellulomonas
flavigena DSM 20109]
gi|296022357|gb|ADG75593.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Cellulomonas
flavigena DSM 20109]
Length = 325
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 87/167 (52%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F+ + ++++ ++ R +++ ++IF ++ A L++ GAEF+ ++ +VV
Sbjct: 23 TAEAVLFWTLGPLMVLAALGLLLARKAVHAALAVIFIMISLAFLYVAQGAEFLGVVQVVV 82
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + L +++ E
Sbjct: 83 YTGAVMMLFLFVLMLVGVDRSDSLVETIRGQRWIGLLAGLGLGVVLAGVVGRATYGAPEG 142
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ +N E + V++ Q+ +E+ G +L+ + +GA+VL R R
Sbjct: 143 LATANQPSNPEAVAHVIFGQHVLAMEVVGALLVTAALGALVLTHRGR 189
>gi|313793599|gb|EFS41639.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL110PA1]
gi|327452510|gb|EGE99164.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL092PA1]
Length = 284
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + ++++ ++V + P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA--------SNFM 113
Y GA+++ FLF++M++ +D + +G + I LA +++
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNAVTTGVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G GNNV+++ ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDHPVGLGQANTAGGNNVKSLAELVFTKYVIVFEATSALLITAAVGTMVLAHGEADKKKS 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + ++ V+ G+
Sbjct: 196 QRERVTDRMAAYAEHGSH-PGVRPNSGV 222
>gi|9280602|gb|AAF86489.1|AF279442_1 NADH dehydrogenase subunit 6 [Lupinus luteus]
Length = 205
Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats.
Identities = 63/190 (33%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL LLLG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFFILVFCDTSGLLLLLGLDFFAMIFLVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AE 118
FLF++MM I I R S IG++ + +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRKTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTQVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|110225673|ref|YP_665679.1| NADH dehydrogenase subunit 6 [Nephroselmis olivacea]
gi|6066188|gb|AAF03206.1|AF110138_38 NADH dehydrogenase subunit 6 [Nephroselmis olivacea]
Length = 197
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 99/190 (52%), Gaps = 7/190 (3%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS +AII LV+ +NP++SV LI F +AAGL L+L +F AM+ LVVYVGA+
Sbjct: 1 MFSIFSSLAIICGILVIRAKNPVHSVLFLILVFCHAAGLLLMLDLDFFAMVFLVVYVGAI 60
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS---- 122
V FLF++MML+I IE IG++ I+ S
Sbjct: 61 AVLFLFVVMMLNIKIEEVYETALPYLPLGGLIGLIFVTEILLVVERDFIPMISSSSLNLQ 120
Query: 123 ---RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
L + ++ IG+++YT Y + ++ ILL++MIGAIVL + +KRQ++ Q
Sbjct: 121 YIQFLPETSSTIQAIGELIYTYYFFYFIVASLILLIAMIGAIVLTMYKGAGVKRQEVFFQ 180
Query: 180 LESNPDNSIV 189
+I
Sbjct: 181 NARECTKTIQ 190
>gi|332676320|gb|AEE73136.1| NADH-quinone oxidoreductase subunit J [Propionibacterium acnes 266]
Length = 284
Score = 104 bits (259), Expect = 8e-21, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + ++++ ++V + P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA--------SNFM 113
Y GA+++ FLF++M++ +D + +G + I LA +++
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILVVGNAVTTGVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G GNNV+++ ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDHPVGLGQANTAGGNNVKSLAELVFTKYVIVFEATSALLITAAVGTMVLAHGEADKKKS 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + ++ V+ G+
Sbjct: 196 QRERVTDRMAAYAEHGSH-PGVRPNSGV 222
>gi|295131451|ref|YP_003582114.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes SK137]
gi|291376680|gb|ADE00535.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes SK137]
gi|313773339|gb|EFS39305.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL074PA1]
gi|313810758|gb|EFS48472.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL083PA1]
gi|313831069|gb|EFS68783.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL007PA1]
gi|313833199|gb|EFS70913.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL056PA1]
gi|314973947|gb|EFT18043.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL053PA1]
gi|314976875|gb|EFT20970.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL045PA1]
gi|314984997|gb|EFT29089.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL005PA1]
gi|315081020|gb|EFT52996.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL078PA1]
gi|315097698|gb|EFT69674.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL038PA1]
gi|327330834|gb|EGE72579.1| NADH dehydrogenase I, J subunit [Propionibacterium acnes HL096PA2]
gi|327442873|gb|EGE89527.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL043PA2]
gi|327445265|gb|EGE91919.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL043PA1]
gi|328761554|gb|EGF75072.1| NADH dehydrogenase I, J subunit [Propionibacterium acnes HL099PA1]
Length = 284
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + ++++ ++V + P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA--------SNFM 113
Y GA+++ FLF++M++ +D + +G + I LA +++
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNAVTTGVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G GNNV+++ ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDHPVGLGQASTAGGNNVKSLAELVFTKYVIVFEATSALLITAAVGTMVLAHGEADKKKS 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + ++ V+ G+
Sbjct: 196 QRERVTDRMAAYAEHGSH-PGVRPNSGV 222
>gi|327394574|dbj|BAK11996.1| NADH-quinone oxidoreductase chain J NuoJ [Pantoea ananatis AJ13355]
Length = 200
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + ++ AG+F LGA F + ++VY G
Sbjct: 19 EFAFYLCGLVAVVTTLRVITHTNPVHALLYLIVSLLSVAGVFFSLGAYFAGALEIIVYAG 78
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + ++ + L + L++ + + + +
Sbjct: 79 AIMVLFVFVVMMLNLGKATEKQEREWLSPSLWIGPGLVSFLLLAVMIYAI--MTAQDQGI 136
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
K + + +G L+ Y +E++ +LL ++ A L R+
Sbjct: 137 DGKIIDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHLGREERQG 182
>gi|63025141|ref|YP_232806.1| NADH dehydrogenase subunit 6 [Tethya actinia]
gi|37961475|gb|AAP59065.1| NADH dehydrogenase subunit 6 [Tethya actinia]
Length = 187
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 71/182 (39%), Positives = 110/182 (60%), Gaps = 5/182 (2%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLF+F IIS +V++ NP++S+ LI AF +AA LF+ L +F+A I L+VYVGA+
Sbjct: 4 LFYLFAFSVIISGIMVISALNPVHSILWLIVAFSSAAVLFIFLEVDFIAFIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDI-DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--- 122
+ FLF+IMML++ D+ + F IG++ ++ S+ + G ++
Sbjct: 64 AILFLFVIMMLNLTDLADSFQDMSNYVPIGFLIGVIIFFKVLIFSSGKLSGLSGVINDFR 123
Query: 123 -RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ K +N+E +G+VLYT Y Y ++ F+LL++MIGAIVL R +IKRQDI Q+
Sbjct: 124 WDFLEKVSNIEVLGRVLYTDYYYYFLLASFVLLVAMIGAIVLTHDLRVEIKRQDIFIQIS 183
Query: 182 SN 183
Sbjct: 184 RQ 185
>gi|11497476|ref|NP_042266.1| NADH dehydrogenase (ubiquinone), subunit 6 [Prototheca wickerhamii]
gi|3122569|sp|Q37626|NU6M_PROWI RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|467867|gb|AAD12654.1| NADH dehydrogenase (ubiquinone), subunit 6 [Prototheca wickerhamii]
Length = 207
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+FS + +IS LV+ RNP++SV L+ F NAAGL +LLG +F A+I LVVYVG
Sbjct: 2 DFLFYIFSSLTLISGSLVIQARNPVHSVLFLVLVFFNAAGLLVLLGLDFFALIFLVVYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-------- 116
A+ V FLF++MML+I I ++ R +G+L I +
Sbjct: 62 AIAVLFLFVVMMLNIRITEISEKRLRYLPVGGVLGVLFLFEICILIDNDCIPLLSYDIEN 121
Query: 117 ----------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ + + + ++ +G +LYT Y Y ++ ILL++MIGAIVL ++
Sbjct: 122 TALLANYNQLSFIDWRMYLSTSHTIDALGSLLYTYYFYFFLVASLILLVAMIGAIVLTMQ 181
Query: 167 HRRDIKRQDISKQLESNPDNSIVMV 191
IKRQ + Q + +I V
Sbjct: 182 KGIRIKRQQVFLQNTRDFAKTIRKV 206
>gi|289065180|ref|YP_003434232.1| NADH dehydrogenase subunit 6 [Chattonella marina]
gi|288871892|dbj|BAI70579.1| NADH dehydrogenase subunit 6 [Chattonella marina]
Length = 203
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 107/203 (52%), Gaps = 11/203 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + LFFYLFS + +IS+ +V+TV NP++SV LI FV +A + LLL EF++++ +++
Sbjct: 1 MSELLFFYLFSGLVLISATMVITVSNPVHSVLFLILGFVGSAAILLLLKVEFLSLMFVII 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF------ 115
YVGA+ V FLF++MMLDI ++ + LG+ L + F
Sbjct: 61 YVGAIAVLFLFVVMMLDIKLKKSGASLGYTALGAISGLFLFFQFFYFIEKISPFSSSFLL 120
Query: 116 -----SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + K N+E +G+ LYT Y + I G +LL+ MIG IVL L
Sbjct: 121 EELFSPYYFDWIDTIDKLTNMECLGQFLYTYYFFHFLIGGILLLVGMIGGIVLTLHVNYK 180
Query: 171 IKRQDISKQLESNPDNSIVMVKV 193
K Q I KQL N+I + V
Sbjct: 181 SKNQLICKQLSRQLKNAIFLTTV 203
>gi|229490769|ref|ZP_04384604.1| NADH-quinone oxidoreductase, j subunit nuoj [Rhodococcus
erythropolis SK121]
gi|229322159|gb|EEN87945.1| NADH-quinone oxidoreductase, j subunit nuoj [Rhodococcus
erythropolis SK121]
Length = 265
Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+IS+ VV +YS L + A +++ GA F+ ++ +VV
Sbjct: 20 TGEAVQFWILGTLAVISALGVVAAPKAVYSALFLAMTMIILAVFYIVQGALFLGVVQIVV 79
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG S I I ++ S G
Sbjct: 80 YTGAVMMLFLFVLMLVGVDSSDSLVETLRGQRVSA-IVIGVGFGLLLIGGLGNASISGFT 138
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
N++ + +++ +Y + E++G +L+ + +GA++L R +
Sbjct: 139 GFTGLDQGNIDALADLIFIRYVWAFELTGALLITATLGAMMLAHREKIG 187
>gi|164421042|ref|YP_001648672.1| NADH dehydrogenase subunit 6 [Plakortis angulospiculatus]
gi|158939032|gb|ABW83952.1| NADH dehydrogenase subunit 6 [Plakortis angulospiculatus]
Length = 197
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 14/191 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY + ++S +V++ NPI+SVF LI F+ A+ LF+LL +F+A+I L+VYVGA+
Sbjct: 4 LFYAITLAILVSGIMVISALNPIHSVFWLIAVFLGASALFILLNIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA--------------SNF 112
+ FLF+IMML++ +G+ I +N
Sbjct: 64 AILFLFVIMMLNLTDLEGVGDMSNYIPIGSVMGVFLLFEIFIIGREAIVYSNEDTDYTNL 123
Query: 113 MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
++S + K +N+E +G++LYT Y Y ++ FILL++MIGAIVL ++K
Sbjct: 124 TDLLDSWDISIEIIKFSNIEALGRILYTDYFYSFILASFILLVAMIGAIVLTHELGIELK 183
Query: 173 RQDISKQLESN 183
RQD+ Q N
Sbjct: 184 RQDLFIQTSRN 194
>gi|298489903|ref|YP_003720080.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 ['Nostoc
azollae' 0708]
gi|298231821|gb|ADI62957.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ['Nostoc
azollae' 0708]
Length = 205
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/198 (27%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + M I ++ VV N +YS F L F++ AGL+LLL +FVA +++Y
Sbjct: 7 VQVISFGILGVMMIGAALGVVLFSNIVYSAFLLGGVFISMAGLYLLLNGDFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF IM+++ + + L +++ L S +V + S
Sbjct: 67 VGAINVLILFAIMLVNKRQDFSP--LPSAGLRKIITSLVSIGLFGLLSTMVVATPWAYSS 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDIKRQDISKQL 180
V +++ IG+ +T + P E++ +LL++M+GAI+L R ++ D+ + +
Sbjct: 125 VPVAGESSIVLIGEHFFTDFLLPFELASILLLMAMVGAIILARREYLPDEVPSSDMPQTI 184
Query: 181 ESNPDNSIVMVKVKSGKG 198
+ P+ +V SG G
Sbjct: 185 LTLPERPRELVSTGSGAG 202
>gi|50843377|ref|YP_056604.1| NADH dehydrogenase subunit J [Propionibacterium acnes KPA171202]
gi|50840979|gb|AAT83646.1| NADH dehydrogenase I chain J [Propionibacterium acnes KPA171202]
gi|315107933|gb|EFT79909.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL030PA1]
Length = 284
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/208 (18%), Positives = 98/208 (47%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + ++++ ++V + P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVLAALVMVFAKKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA--------SNFM 113
Y GA+++ FLF++M++ +D + +G + I LA +++
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAMIAALAFVVLLILAVGNAVTTGVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G GNNV+++ ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDYPVGLGQANTAGGNNVKSLAELVFTKYVIVFEATSALLITAAVGTMVLAHGEADKKKS 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + ++ V+ G+
Sbjct: 196 QRERVTDRMAAYAEHGSH-PGVRPNSGV 222
>gi|226306205|ref|YP_002766165.1| NADH-quinone oxidoreductase chain J [Rhodococcus erythropolis PR4]
gi|226185322|dbj|BAH33426.1| NADH-quinone oxidoreductase chain J [Rhodococcus erythropolis PR4]
Length = 265
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ +A+IS+ VV +YS L + A +++ GA F+ ++ +VV
Sbjct: 20 TGEAVQFWILGTLAVISALGVVAAPKAVYSALFLAMTMIILAVFYIVQGALFLGVVQIVV 79
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG S I I ++ S G
Sbjct: 80 YTGAVMMLFLFVLMLVGVDSSDSLVETLRGQRVSA-IVIGVGFGLLLIGGLGNASISGFT 138
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
N++ + +++ +Y + E++G +L+ + +GA++L R +
Sbjct: 139 GFTGLDQGNIDALADLIFIRYVWAFELTGALLITATLGAMMLAHREKIG 187
>gi|261599936|dbj|BAI45219.1| NADH dehydrogenase [Dianthus japonicus]
Length = 205
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 64/190 (33%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F N +GL LLLG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFSAMIFLVVYIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDSRRTI 194
>gi|33866802|ref|NP_898361.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 8102]
gi|33639403|emb|CAE08787.1| NADH dehydrogenase I chain 6 (or J) [Synechococcus sp. WH 8102]
Length = 200
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + S + + + VV + N +YS F L F+ AGL+LLL A FVA ++V
Sbjct: 6 TTELICFLVLSAVVVTGALGVVLLSNIVYSAFLLGGVFMAVAGLYLLLNASFVAAAQVLV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ V LF IM+++ ++ + G + L+ ++ +
Sbjct: 66 YVGAINVLILFAIMLVNKREDL--KAIAGLNVRRAVSGGVCLGLLALLVRVVLTTPWSLP 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 124 GPAAVGEEATARIGEHLFTDYLLPFEVASVLLLMAMIGAIVLARR 168
>gi|284794760|ref|YP_003412113.1| NADH dehydrogenase subunit 6 [Phaeoceros laevis]
gi|254596080|gb|ACT75321.1| NADH dehydrogenase subunit 6 [Phaeoceros laevis]
Length = 201
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F + S +A++S +N ++ V LI F N +GL +LLG + AMI LVVY GA
Sbjct: 2 ILFSVPSSIALVSGVTATRAKNLVHFVLFLIPVFRNTSGLLVLLGLDSFAMIFLVVYAGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMV 114
+ + M +I I R IG++ I
Sbjct: 62 IAASSPSVAMTSNIKIAEIHENVLRYLPVGGIIGLILLLEIFFIVDNDYIPILPTKLSTA 121
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + + N+E +G +LYT Y S FILL++MIGA VL + +KRQ
Sbjct: 122 YLTYTVYAGKIQSWTNLETLGNLLYTTYFTLFLFSSFILLVAMIGATVLTMHKTTRVKRQ 181
Query: 175 DISKQLESNPDNSIVMVK 192
D+ +Q + N+I ++
Sbjct: 182 DVFRQNARDFQNTIKKIR 199
>gi|37520222|ref|NP_923599.1| NADH dehydrogenase subunit J [Gloeobacter violaceus PCC 7421]
gi|35211215|dbj|BAC88594.1| NADH dehydrogenase subunit 6 [Gloeobacter violaceus PCC 7421]
Length = 197
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + + + + VV +R+ ++S F L F+ AAGL++LL A+FVA +++Y
Sbjct: 7 VQLVSFIILTAIVLGGAAGVVLLRSMVHSAFLLGLVFIGAAGLYVLLNADFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ I P F + L + +F ++
Sbjct: 67 VGAVNVLILFAIMLVNKRIPTDRP----AFSPRNAVTGLVCAGLFALLAVCIFQVPWQIQ 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V VE IGK ++++ P E++ +LLL+M+GAI+L R
Sbjct: 123 EPVAMNTVVE-IGKRFFSEFLLPFEVASVLLLLAMVGAIILAQRE 166
>gi|291618181|ref|YP_003520923.1| NuoJ [Pantoea ananatis LMG 20103]
gi|291153211|gb|ADD77795.1| NuoJ [Pantoea ananatis LMG 20103]
Length = 204
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + ++ AG+F LGA F + ++VY G
Sbjct: 23 EFAFYLCGLVAVVTTLRVITHTNPVHALLYLIVSLLSVAGVFFSLGAYFAGALEIIVYAG 82
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + ++ + L + L++ + + + +
Sbjct: 83 AIMVLFVFVVMMLNLGKATEKQEREWLSPSLWIGPGLVSFLLLAVMIYAI--MTAQDQGI 140
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
K + + +G L+ Y +E++ +LL ++ A L R+
Sbjct: 141 DGKIIDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHLGREERQG 186
>gi|58584882|ref|YP_198455.1| NADH:ubiquinone oxidoreductase chain J [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58419198|gb|AAW71213.1| NADH:ubiquinone oxidoreductase chain J [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 177
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 74/179 (41%), Positives = 112/179 (62%), Gaps = 6/179 (3%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
+++VRNP+++V LIF FV++ LF+LLGAEF+AM+ L+VY+GAV V FLF++MMLDID
Sbjct: 1 MISVRNPVHAVLFLIFTFVSSTVLFILLGAEFIAMMVLIVYIGAVAVLFLFVVMMLDIDY 60
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ 141
+ F S + ++ +I V S + + NNV+ IG +LYT
Sbjct: 61 IRIHQGFAKHFTFSIILCVVFFLVISFVICSSVL---NISSVIDYNANNVKAIGDLLYTD 117
Query: 142 YAYPLEISGFILLLSMIGAIVLML-RHRRDIKRQDISKQLESNPDNSIVMVKVKSGKGI 199
Y Y +SG +LL++++GAI L L ++ IKRQ++ KQL +S+ +VK K GKG+
Sbjct: 118 YMYAFHLSGILLLVAIVGAIALTLQDKKKGIKRQNVLKQL--TQSSSVKLVKAKFGKGV 174
>gi|133900448|gb|ABO41390.1| NADH dehydrogenase subunit 6 [Erythroxylum coca]
Length = 179
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL +LLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLILLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ I + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEIFFIIDNETIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900534|gb|ABO41433.1| NADH dehydrogenase subunit 6 [Poliothyrsis sinensis]
Length = 179
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL +LLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLILLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|3617814|emb|CAA08932.1| NADH dehydrogenase subunit 6 [Daucus carota]
gi|15705129|gb|AAK00521.1| NADH dehydrogenase subunit 6 [Daucus carota]
gi|15809215|gb|AAK00513.1| NADH dehydrogenase subunit 6 [Daucus carota]
Length = 205
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S+ +VV +NP++SV I F N +GL LLLG +F AMI VVY+GA+ V
Sbjct: 5 VLSSLALVSALMVVRAKNPVHSVSFSIPVFRNTSGLLLLLGLDFFAMIFPVVYIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 MVYAGKVRSWTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDSRRTI 194
>gi|123965422|ref|YP_001010503.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9515]
gi|123199788|gb|ABM71396.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Prochlorococcus marinus str. MIT 9515]
Length = 199
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q + F + S + I+ + V+ + + +YS F L F++ AGL+LLL A FVA ++V
Sbjct: 6 TTQIICFSVLSLVVIVGALGVILLDSIVYSAFLLGGVFMSVAGLYLLLNASFVAAAQVLV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V +F IM+++ E +P I L + +
Sbjct: 66 YVGAVNVLIIFAIMLVN-KKEDLKPINNINSRRIISTSICLTLLSLLIRVDLSNVWSLAD 124
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ IG+ L++ Y P E++ +LL++MIGAIVL R
Sbjct: 125 PNSSIGEESTIRIGEHLFSDYLLPFEVASVLLLMAMIGAIVLARR 169
>gi|295311651|ref|YP_003587236.1| NADH dehydrogenase subunit 6 [Citrullus lanatus]
gi|259156779|gb|ACV96641.1| NADH dehydrogenase subunit 6 [Citrullus lanatus]
Length = 205
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|330470208|ref|YP_004407951.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Verrucosispora maris AB-18-032]
gi|328813179|gb|AEB47351.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Verrucosispora maris AB-18-032]
Length = 204
Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + +A+ S LVV+ R+ + + L+ AG++L+L AE VA + ++
Sbjct: 1 MTGVDVLLLALGAVAVGSGVLVVSTRHLVRAGLYLVVCLGAVAGMYLVLTAELVAWVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGAV+V LF +M+ I ++ + G+ + G + L + +
Sbjct: 61 IYVGAVVVLLLFAVMLTRAPIGASDDLDRPGWPAALIGGGVGLGLAALLIDAFRW----- 115
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + E IG+ ++ + P E+ +LL +++GAIVL
Sbjct: 116 TTVELPEAGTAERIGEQVFASWVLPFEVLSILLLSALVGAIVLSR 160
>gi|254431361|ref|ZP_05045064.1| NAD(P)H-quinone oxidoreductase chain 6 [Cyanobium sp. PCC 7001]
gi|197625814|gb|EDY38373.1| NAD(P)H-quinone oxidoreductase chain 6 [Cyanobium sp. PCC 7001]
Length = 200
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q + F S ++ + VV + N +YS F L F++ AGL+L+L A FVA ++V
Sbjct: 6 TTQFICFAALSATLVLGALGVVLLPNIVYSAFLLAGVFLSVAGLYLMLNASFVAAAQILV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V LF IM+++ +++ + G++ L V V +
Sbjct: 66 YVGAVNVLILFAIMLVNKREDLSVIKGLALRRAL--SGLVCGGLFVLLIRVAVTTPWALP 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
IG+ L++ Y P E++ +LL++MIGAIVL R
Sbjct: 124 GPTPVGEEATIRIGEHLFSDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|227494512|ref|ZP_03924828.1| NADH dehydrogenase subunit J [Actinomyces coleocanis DSM 15436]
gi|226832246|gb|EEH64629.1| NADH dehydrogenase subunit J [Actinomyces coleocanis DSM 15436]
Length = 321
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F+ + I + V+ ++ Y+ S++ V A L+LL GA F+ ++ +VVY
Sbjct: 17 EAVLFFFVATAMIAGALGVLFLKKAAYAAISMVVVMVGLAVLYLLHGAPFMGIVQIVVYT 76
Query: 64 GAVIVFFLFIIMMLDID-IEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA+++ FLF++MM+ ++ + + + + + + + + E
Sbjct: 77 GAIMMLFLFVLMMIGLNASDEYQSQNRTYITMAVTLATVLLAGFGITVAYTAMGETQEFK 136
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
F VE + K L+ Y + +E++G +L++++IGA++L R
Sbjct: 137 VDAFSDAPVEELAKTLFANYWFSMELAGTLLIVAVIGAVLLTNGDR 182
>gi|159030036|emb|CAO90417.1| ndhG [Microcystis aeruginosa PCC 7806]
Length = 198
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + + I ++ VV + N +YS F L F++ +GL+LLL A+FVA +++Y
Sbjct: 7 VQIVSFGILAALVIGTALGVVLLSNIVYSAFLLGGVFISISGLYLLLNADFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF IM+++ + ++ K+ S + + +++ + + S
Sbjct: 67 VGAINVLILFAIMLVNKQEDFSDIPKRWIRQASTALVCVGLFVLLSTMVLITPWSISSTS 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
V VE IGK ++ + P E++ +LL++M+GAI+L R
Sbjct: 127 PAVVTNTLVE-IGKHFFSDFLLPFELASVLLLMAMVGAIILARR 169
>gi|291280348|ref|YP_003497183.1| NADH-quinone oxidoreductase subunit J [Deferribacter desulfuricans
SSM1]
gi|290755050|dbj|BAI81427.1| NADH-quinone oxidoreductase, J subunit [Deferribacter desulfuricans
SSM1]
Length = 166
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 99/166 (59%), Gaps = 1/166 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + FY+ +F+AI+S+ ++T NP++S ++ F + AG+F+ L AEF+A I ++VY
Sbjct: 1 MEQVAFYILAFLAIVSALFMITRTNPVHSALWMLLTFFSVAGIFVQLDAEFIAAIQVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V +LF++M+L+ R +G+ I+ + ++ V +G+++
Sbjct: 61 AGAILVLYLFVVMLLNPKSHGFIKIPFRYAIGTVVSIIIVIQTLIAVKTTDVLGQKGDIT 120
Query: 123 RLVF-KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V + NV+ GK L+T + P EI+ +LL++MIGAIVL +
Sbjct: 121 DTVISQYGNVKLFGKALFTDFLVPFEIASILLLVAMIGAIVLARKE 166
>gi|224365671|ref|YP_002608398.1| NADH dehydrogenase subunit 6 [Vitis vinifera]
gi|209954195|emb|CAQ77660.1| NADH dehydrogenase subunit 6 [Vitis vinifera]
gi|239764731|gb|ACS15202.1| NADH dehydrogenase subunit 6 [Vitis vinifera]
Length = 223
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V
Sbjct: 23 VSSSPALVSGLMVARAKNPVHSVLFPIPVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVS 82
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AE 118
FLF++MM I I R S IG++ + +
Sbjct: 83 FLFVVMMFHIQIAETHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRKTTSLRY 142
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ +
Sbjct: 143 TVYAEKVRSWTNLETLGNLLYTYYSVWFLVPSPILLVAMIGAIVLTMHRTTKVKRQDVFR 202
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 203 RNAIDSRRTI 212
>gi|166368384|ref|YP_001660657.1| NADH dehydrogenase subunit J [Microcystis aeruginosa NIES-843]
gi|166090757|dbj|BAG05465.1| NADH dehydrogenase subunit J [Microcystis aeruginosa NIES-843]
Length = 198
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + + I ++ VV + N +YS F L F++ +GL+LLL A+FVA +++Y
Sbjct: 7 VQIVSFGILAALVIGTALGVVLLSNIVYSAFLLGGVFISISGLYLLLNADFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF IM+++ + ++ K+ S + + +++ + + S
Sbjct: 67 VGAINVLILFAIMLVNKQEDFSDIPKRWIRQASTALVCVGLFVLLSTMVLITPWSISTTS 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
V VE IGK ++ + P E++ +LL++M+GAI+L R
Sbjct: 127 PAVVTNTLVE-IGKHFFSDFLLPFELASVLLLMAMVGAIILARR 169
>gi|317097475|ref|YP_004123691.1| NADH dehydrogenase subunit 6 [Plakina sp. DVL-2010]
gi|308912635|gb|ADO51399.1| NADH dehydrogenase subunit 6 [Plakina sp. DVL-2010]
Length = 197
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 100/191 (52%), Gaps = 14/191 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY + ++S +V++ NPI+SVF LI F+ A+ LF+LL +F+A+I L+VYVGA+
Sbjct: 4 LFYAITLAVLVSGIMVISALNPIHSVFWLIAVFLGASALFILLNIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--------------NF 112
+ FLF+IMML++ +G+ I N
Sbjct: 64 AILFLFVIMMLNLTDLEGAGDMSNFIPIGSVMGVFLLFEIFIIGREAIVYSNRDSDYENL 123
Query: 113 MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
++S + K +N+E +G++LYT Y Y ++ FILL++MIGAIVL ++K
Sbjct: 124 TDVLGFWDVSIEIIKFSNIEALGRILYTDYFYSFILASFILLVAMIGAIVLTHELGIELK 183
Query: 173 RQDISKQLESN 183
RQD+ Q N
Sbjct: 184 RQDLFIQTSRN 194
>gi|78778546|ref|YP_396658.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9312]
gi|78712045|gb|ABB49222.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9312]
Length = 199
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q + F + S + +I + VV + + +YS F L F++ AGL+LLL A FVA ++V
Sbjct: 6 TTQIICFIVLSLVVLIGALGVVLLESIVYSAFLLGGVFMSVAGLYLLLNASFVAAAQVLV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V +F IM+++ E +P I L + +
Sbjct: 66 YVGAVNVLIIFAIMLVN-KKEDLKPINNIKSRRIISTSICLTLLSLLIRVDLTNVWRLAS 124
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ IG+ L++ Y P E++ +LL++MIGAIVL R
Sbjct: 125 PENSIGEESTIRIGEHLFSDYLLPFELASVLLLMAMIGAIVLARR 169
>gi|126695516|ref|YP_001090402.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9301]
gi|126542559|gb|ABO16801.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Prochlorococcus marinus str. MIT 9301]
Length = 199
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q + F + S + +I + VV + + +YS F L F++ AGL+LLL A FVA ++V
Sbjct: 6 TTQIICFTILSLVILIGALGVVLLESIVYSAFLLGGVFMSVAGLYLLLNASFVAAAQVLV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V +F IM+++ E +P I L + + +
Sbjct: 66 YVGAVNVLIIFAIMLVN-KKEDLKPINDIKSRRIISTSICLTLLSLLIRVDLTNTWSLSS 124
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
++ + IG+ L++ Y P E++ +LL++MIGAIVL R
Sbjct: 125 TQNSIGEESTIRIGEHLFSDYLLPFEVASVLLLMAMIGAIVLARR 169
>gi|289667370|ref|ZP_06488445.1| NADH dehydrogenase subunit J [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 194
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 4/193 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FY FS +A++S+ V++VRNP+Y+V LI F + A ++LL+GAEF+ + ++
Sbjct: 2 MDWVTIAFYAFSAVAVVSAGAVISVRNPVYAVLCLILTFFSMACIWLLVGAEFLGVTLVL 61
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM----VFS 116
VYVGAV+V FLF++MMLDID + + + +V
Sbjct: 62 VYVGAVMVLFLFVVMMLDIDTSRLREGWVKYMPLGVIVAVAMLAQMVTLIGVKSRSATPF 121
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ +N+ + K LYT++ P E + IL ++++ A++L LR R IK Q+
Sbjct: 122 PADNAAAQAADSSNLTWLAKSLYTEFLLPFEFAAVILTVAVVAAVMLTLRKRTGIKLQNA 181
Query: 177 SKQLESNPDNSIV 189
+Q + +
Sbjct: 182 GEQSRVKAGDRLR 194
>gi|163848449|ref|YP_001636493.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Chloroflexus aurantiacus J-10-fl]
gi|222526377|ref|YP_002570848.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Chloroflexus sp. Y-400-fl]
gi|163669738|gb|ABY36104.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chloroflexus
aurantiacus J-10-fl]
gi|222450256|gb|ACM54522.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chloroflexus
sp. Y-400-fl]
Length = 168
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 89/167 (53%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + F + + +AII + ++ RN ++S L+ F A LFLLL A F+ I L VY
Sbjct: 1 MELILFLITALIAIIGAVAMLVSRNAVHSALFLLLNFAAIAVLFLLLNAPFLFAIQLTVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF++M+L + P + + LA +I + S
Sbjct: 61 AGAIMVLFLFVVMLLGAEKVEDTPDQIPWQQPLALLLGLALLVISVVVGLGGATNPPPES 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + ++ + +G +L+T Y P E++GFILL+++IG +VL R R+
Sbjct: 121 EALAQFSDPQTLGALLFTDYLLPFEVTGFILLIAVIGVVVLNQRGRK 167
>gi|260436292|ref|ZP_05790262.1| NAD(P)H-quinone oxidoreductase chain 6 [Synechococcus sp. WH 8109]
gi|260414166|gb|EEX07462.1| NAD(P)H-quinone oxidoreductase chain 6 [Synechococcus sp. WH 8109]
Length = 199
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 2/165 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + S + +I + VV + N +YS F L F AGL+LLL A FVAM ++V
Sbjct: 6 TTELICFLVLSAVVVIGALGVVLLSNIVYSAFLLGGVFTAVAGLYLLLNASFVAMAQILV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ V LF IM+++ ++ + L+ +V +
Sbjct: 66 YVGAINVLILFAIMLVNKREDL--KAIANLTTRRVVSAGVCVGLLALLVRVVVTTPWSLP 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 124 GPAAVGEEATARIGEHLFTDYLLPFEVASVLLLMAMIGAIVLARR 168
>gi|157412515|ref|YP_001483381.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9215]
gi|254525620|ref|ZP_05137672.1| NADH dehydrogenase i chain 6 (or j) [Prochlorococcus marinus str.
MIT 9202]
gi|157387090|gb|ABV49795.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Prochlorococcus marinus str. MIT 9215]
gi|221537044|gb|EEE39497.1| NADH dehydrogenase i chain 6 (or j) [Prochlorococcus marinus str.
MIT 9202]
Length = 199
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q + F + S + +I + VV + + +YS F L F++ AGL+LLL A FVA ++V
Sbjct: 6 TTQFICFTVLSLVVLIGALGVVLLESIVYSAFLLGGVFMSVAGLYLLLNASFVAAAQVLV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V +F IM+++ E +P I L + + +
Sbjct: 66 YVGAVNVLIIFAIMLVN-KKEDLKPINDIKSRRIISTSICLTLLSLLIRVDLTNVWNLSI 124
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ IG+ L++ Y P E++ +LL++MIGAIVL R
Sbjct: 125 PENSIGEESTIRIGEHLFSDYLLPFEVASVLLLMAMIGAIVLARR 169
>gi|123967713|ref|YP_001008571.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. AS9601]
gi|123197823|gb|ABM69464.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Prochlorococcus marinus str. AS9601]
Length = 199
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q + F + S + +I + VV + + +YS F L F++ AGL+LLL A FVA ++V
Sbjct: 6 TTQIICFTVLSLVILIGALGVVLLESIVYSAFLLGGVFMSVAGLYLLLNASFVAAAQVLV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V +F IM+++ E +P I L + +
Sbjct: 66 YVGAVNVLIIFAIMLVN-KKEDLKPISDIKSRRIISTSICLTLLSLLIRVDLTNVWRLSN 124
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ + IG+ L++ Y P E++ +LL++MIGAIVL R
Sbjct: 125 PQNSIGEESTIRIGEHLFSDYLLPFEVASVLLLMAMIGAIVLARR 169
>gi|317097125|ref|YP_004123257.1| NADH dehydrogenase subunit 6 [Plakina jani]
gi|308912726|gb|ADO51484.1| NADH dehydrogenase subunit 6 [Plakina jani]
Length = 197
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 101/190 (53%), Gaps = 14/190 (7%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY + ++S +V++ NPI+SVF LI F+ A+ LF+LL +F+A+I L+VYVGA+
Sbjct: 5 FYAITLAVLVSGIMVISALNPIHSVFWLIAVFLGASALFILLNMDFIALIFLIVYVGAIA 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--------------NFM 113
+ FLF+IMML++ +G+ I N M
Sbjct: 65 ILFLFVIMMLNLTDLEGAGDMSNYIPIGSVMGVFLLFEIFIMGREAIVYSNRDTDYENLM 124
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++S + K +N+E +G++LYT Y Y ++ FILL++MIGAIVL ++KR
Sbjct: 125 DVLDFWDVSIEIIKFSNIEALGRILYTDYFYSFILASFILLVAMIGAIVLTHELGIELKR 184
Query: 174 QDISKQLESN 183
QD+ Q N
Sbjct: 185 QDLFIQTSRN 194
>gi|269955286|ref|YP_003325075.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Xylanimonas
cellulosilytica DSM 15894]
gi|269303967|gb|ACZ29517.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Xylanimonas
cellulosilytica DSM 15894]
Length = 301
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 79/170 (46%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++ F + + + +I++ ++ + +++ ++F ++ A L++ A F+ ++ +VVY
Sbjct: 7 EAALFGVLAPLMVIAALGLLFAKRAVHAAMCVVFVMISLAILYVANEAPFLGIVQVVVYT 66
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV++ FLF++M++ +D + RG + +++
Sbjct: 67 GAVMMLFLFVLMLVGVDAADSLTETIRGQRWIGVLFGAGLLVVLLTVLARTDLPPAIGLD 126
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
L N + +L+ Y +E+ G +L+ + + +VL R R +R
Sbjct: 127 LANAQTNPTGLAAILFGDYVIGMEVIGVLLVTAALAGLVLTHRRRLGPRR 176
>gi|133900436|gb|ABO41384.1| NADH dehydrogenase subunit 6 [Drypetes roxburghii]
Length = 178
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F +G+ LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFCETSGVLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|73667097|ref|YP_303113.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Ehrlichia
canis str. Jake]
gi|72394238|gb|AAZ68515.1| NADH dehydrogenase subunit J [Ehrlichia canis str. Jake]
Length = 200
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 112/198 (56%), Gaps = 5/198 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F+ F+ + ++SS VV + NP+YSV LI F ++ LF+LLGAE +AM+ ++VY
Sbjct: 1 MVYFLFHFFAALIVLSSVAVVYISNPVYSVLFLILTFFISSTLFILLGAELIAMLVIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLDI+ + + G++ IV + S
Sbjct: 61 VGAVAVLFLFVVMMLDINYSRFKNVFTKYLAIGLLCGVILFVNIVFIIRQSATTELVTES 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR-HRRDIKRQDISKQLE 181
V +NV IG ++YT+Y Y +SG +LL+S+IGA+VL LR + RQ+I+ Q+
Sbjct: 121 --VQYVSNVVAIGNLIYTEYMYIFHLSGILLLISIIGALVLTLRAKNSSVHRQNINMQIN 178
Query: 182 SNPDNSIVMVKVKSGKGI 199
+SI V VK +G+
Sbjct: 179 R--PSSIKYVSVKVKEGV 194
>gi|254796410|ref|YP_003081246.1| NADH dehydrogenase i, j subunit [Neorickettsia risticii str.
Illinois]
gi|254589647|gb|ACT69009.1| NADH dehydrogenase i, j subunit [Neorickettsia risticii str.
Illinois]
Length = 189
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ +L +AI SSF VV+ RN +++V L+ AF ++ L L G E ++++ LVVYVGA
Sbjct: 3 ILCFLLVLVAIFSSFRVVSCRNVVHAVLYLVLAFFTSSVLLLAAGLEVLSLMLLVVYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+ + FLF++MML+ D + L + F + + + ++
Sbjct: 63 IAILFLFVVMMLNSDDFKKGVEMS--------VAKYVGLLFIALLPFFLVLSSYDDTQQE 114
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPD 185
++++IG VLYT Y Y +SG +LLL+M+ AI + L + D K Q + +Q+
Sbjct: 115 RTYVSIKDIGAVLYTDYVYLFHLSGVVLLLAMVAAISIALPSKSDTKCQVVREQISR--S 172
Query: 186 NSIVMVKVKSGKGI 199
+ + ++ V SGKG+
Sbjct: 173 SVVRLLNVPSGKGV 186
>gi|87301842|ref|ZP_01084676.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 5701]
gi|87283410|gb|EAQ75365.1| NADH dehydrogenase subunit J [Synechococcus sp. WH 5701]
Length = 208
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q + F S ++ S VV + N +YS F L F++ AGL+LLL A FVA ++VYV
Sbjct: 8 QLVCFIALSLTLVLGSLGVVLLPNIVYSAFLLAGVFLSVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ +AE L G + L + + +
Sbjct: 68 GAVNVLILFAIMLVNKKEAMAE--IPGLLLRRLLSGAVCLGLFLLILRVDLTTPWAVPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ IG L++ Y P E++ +LL++MIGAIVL R
Sbjct: 126 TPLGDDATVLIGIHLFSDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|257852736|gb|ACV71380.1| NADH dehydrogenase subunit 6 [Prunus caroliniana]
Length = 178
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL +LLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPIPVFRDTSGLLILLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVQS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 177
>gi|317097235|ref|YP_004123364.1| NADH dehydrogenase subunit 6 [Plakortis simplex]
gi|308912757|gb|ADO51513.1| NADH dehydrogenase subunit 6 [Plakortis simplex]
Length = 197
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 14/191 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY + ++S +V++ NPI+SVF LI F+ A+ LF+LL +F+A+I L+VYVGA+
Sbjct: 4 LFYAITLAVLVSGIMVISALNPIHSVFWLIAVFLGASALFILLNIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--------------NF 112
+ FLF+IMML++ +G+ I NF
Sbjct: 64 AILFLFVIMMLNLTDLEGVGDMSNYIPIGSVMGVFLLFEIFIIGREAIVYSNGDTDYANF 123
Query: 113 MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
M ++S + K +N+E +G+VLYT Y Y ++ FILL++MIGAIVL ++K
Sbjct: 124 MDVLDFSDVSLEIIKFSNIEALGRVLYTDYFYSFILASFILLVAMIGAIVLTHELGIELK 183
Query: 173 RQDISKQLESN 183
RQD+ Q+ N
Sbjct: 184 RQDLFIQISRN 194
>gi|317097391|ref|YP_004123598.1| NADH dehydrogenase subunit 6 [Plakina crypta]
gi|308912604|gb|ADO51370.1| NADH dehydrogenase subunit 6 [Plakina crypta]
Length = 197
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 101/191 (52%), Gaps = 14/191 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY + ++S +V++ NPI+SVF LI F+ A+ LF+LL +F+A+I L+VYVGA+
Sbjct: 4 LFYAITLAVLVSGIMVISALNPIHSVFWLIAGFLGASALFILLNIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--------------NF 112
+ FLF+IMML++ +G+ N
Sbjct: 64 AILFLFVIMMLNLTDLEGAGDMSNFIPIGSVMGVFLLFEXFIIGREVVVYSNRDSDYENL 123
Query: 113 MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
M ++S + K +N+E +G++LYT Y Y ++ FILL++MIGAIVL ++K
Sbjct: 124 MDVLYFWDVSIEIIKFSNIEALGRILYTDYFYSFILASFILLVAMIGAIVLTHELGIELK 183
Query: 173 RQDISKQLESN 183
RQD+ Q+ N
Sbjct: 184 RQDLFIQMSRN 194
>gi|295311694|ref|YP_003587371.1| NADH dehydrogenase subunit 6 [Cucurbita pepo]
gi|259156822|gb|ACV96683.1| NADH dehydrogenase subunit 6 [Cucurbita pepo]
Length = 205
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHESVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAEKVRSWTNLETLGNLLYTYYSVWFLLSSLILLVAMIGAIVLTMHRTTKVKRQDLFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|327398406|ref|YP_004339275.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Hippea
maritima DSM 10411]
gi|327181035|gb|AEA33216.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Hippea
maritima DSM 10411]
Length = 167
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 86/164 (52%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+++ FY+ + + + + V+ +NP + ++ AF AGLF++L A+F AM+ L+VY
Sbjct: 1 MEAIVFYIIAILTVGGALGVLLSKNPYRAALFMVLAFFGIAGLFVMLHAQFNAMLQLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA+ V +M+++ R + + FIGI ++ +
Sbjct: 61 AGAIAVMITLTMMVMNRRTLEGLKRFNSQWYWAAFIGIGLLADLIALAYKFKIDLSNAGK 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
L G+N + IG+VL+ Y P EI+ ILL++++GA+VL R
Sbjct: 121 NLALGGSNTKLIGEVLFKHYLLPFEITAIILLVALLGAVVLTKR 164
>gi|284106854|ref|ZP_06386297.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Candidatus
Poribacteria sp. WGA-A3]
gi|283830033|gb|EFC34309.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Candidatus
Poribacteria sp. WGA-A3]
Length = 170
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 59/170 (34%), Positives = 101/170 (59%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F F+ + ++++ LVV +RNPIYS SL+ F + AGL++ L AEF+A I ++VY
Sbjct: 1 MATFVFLYFAAVILVAASLVVVLRNPIYSALSLLVMFFHVAGLYVTLHAEFLAAIQIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V +LF++M+L++ E ++ L + + A L+ + F V + +
Sbjct: 61 AGAILVLYLFVVMLLNVKREERFNQQGTVALFLGLVLLTEAVLLAVSRGFNVATPDPGPE 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
N E+IG+VLY+ Y +P EI+ ILL++MIGA++L + + K
Sbjct: 121 GAAKAVGNTESIGEVLYSTYLFPFEIASLILLVAMIGAVILSKKGIMESK 170
>gi|154508647|ref|ZP_02044289.1| hypothetical protein ACTODO_01148 [Actinomyces odontolyticus ATCC
17982]
gi|153798281|gb|EDN80701.1| hypothetical protein ACTODO_01148 [Actinomyces odontolyticus ATCC
17982]
Length = 325
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + + V+ + +SV ++ + A L++ A F+ + +VV
Sbjct: 13 TGEIILFACTAILMVACALGVLFFKKAAHSVICMVGVMLGLAVLYIANSAPFLGVAQIVV 72
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF+IM++ I R+ RG + + +G L +IV + A +
Sbjct: 73 YTGAIMMLFLFVIMLIGIGTSDDYARQSRGAIVAAVLGGLGLIVIVTTAILKAVPAPHKP 132
Query: 122 SRL-VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++ L+ ++ +E++G +L+ + +GA++L R K
Sbjct: 133 VEVDPYSNQPITDLAITLFQEHWLSMELAGGLLITAAVGAMLLTHSDRLTPK 184
>gi|224020958|ref|YP_002608191.1| NADH dehydrogenase subunit 6 [Carica papaya]
gi|170522370|gb|ACB20480.1| NADH dehydrogenase subunit 6 [Carica papaya]
Length = 205
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 90/190 (47%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V
Sbjct: 5 VLSSPALVSGLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I R S IG++ +
Sbjct: 65 FLFVVMMFHIQKAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAISFRRTI 194
>gi|297625737|ref|YP_003687500.1| NADH-quinone oxidoreductase chain J (NADH dehydrogenase I, chain J)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921502|emb|CBL56056.1| NADH-quinone oxidoreductase chain J (NADH dehydrogenase I, chain J)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 289
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q++ F++ +++I+ +V R P++S L V AGL+ L A F+ + ++V
Sbjct: 6 TAQAVAFWVLGPLSVIAGVGMVVNRKPVHSALCLAGLMVCLAGLYASLDAPFLFVAQIIV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-MVFSAEGE 120
Y GAV++ F+F +M++ ID +G + IG++ ++ + + S+
Sbjct: 66 YTGAVMMLFVFTMMVIGIDTVDEMIETIKGQRVAAIIGVVGLLALLVLAVGHGIVSSPAG 125
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
L + NV ++ ++++ Y +P E + +L+ + + A+VL K Q +
Sbjct: 126 LEQATGADGNVRSLAYLIFSDYVFPFEATAALLITAALAAMVLAHGEPLFKKEQQKERIN 185
Query: 181 ESNPD--NSIVMVKVKSGKGI 199
+ G+
Sbjct: 186 RRTKEFGEKGTQPGPLPNPGV 206
>gi|293191759|ref|ZP_06609283.1| NADH dehydrogenase I, J subunit [Actinomyces odontolyticus F0309]
gi|292820452|gb|EFF79435.1| NADH dehydrogenase I, J subunit [Actinomyces odontolyticus F0309]
Length = 325
Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 83/172 (48%), Gaps = 1/172 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + + V+ + +SV ++ + A L++ A F+ + +VV
Sbjct: 13 TGEIILFACTAILMVACALGVLFFKKAAHSVICMVGVMLGLAVLYIANSAPFLGVAQIVV 72
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF+IM++ I R+ RG + + +G L +IV + A +
Sbjct: 73 YTGAIMMLFLFVIMLIGIGTSDDYARQSRGAIVAAVLGGLGLIVIVTTAILKAVPAPHKP 132
Query: 122 SRL-VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++ L+ ++ +E++G +L+ + +GA++L R K
Sbjct: 133 VEVDPYSNQPITDLAITLFQEHWLSMELAGGLLITAAVGAMLLTHSDRLTPK 184
>gi|317134294|ref|YP_004123149.1| NADH dehydrogenase subunit 6 [Plakina trilopha]
gi|308912666|gb|ADO51428.1| NADH dehydrogenase subunit 6 [Plakina trilopha]
Length = 197
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 65/192 (33%), Positives = 101/192 (52%), Gaps = 14/192 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY + ++S +V++ NPI+SVF LI F+ A+ LF+LL +F+A+I L+VYVGA+
Sbjct: 4 LFYAITLAVLVSGIMVISALNPIHSVFWLIAVFLGASALFILLNIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--------------NF 112
+ FLF+IMML++ +G+ I N
Sbjct: 64 AILFLFVIMMLNLTDLGGAGDMSNYIPIGSVMGVFLLFEIFIMGREAIVYSNRDTDYENL 123
Query: 113 MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
M ++S + K +N+E +G++LYT Y Y ++ FILL++MIGAIVL ++K
Sbjct: 124 MDVLDFWDVSIEIIKFSNIEALGRILYTNYFYLFILASFILLVAMIGAIVLTHELGIELK 183
Query: 173 RQDISKQLESNP 184
RQD+ Q N
Sbjct: 184 RQDLFIQTSRNF 195
>gi|313768501|ref|YP_004062177.1| NADH dehydrogenase subunit 6 [Gracilariophila oryzoides]
gi|312844628|gb|ADR03193.1| NADH dehydrogenase subunit 6 [Gracilariophila oryzoides]
Length = 202
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 113/201 (56%), Gaps = 7/201 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + LFS I+SS +V+++ N ++S+ LI F N AGL LLLGAEF++ + L+
Sbjct: 1 MYTDLFLYLLFSSFTIVSSLMVISLSNAVHSILFLILVFCNVAGLLLLLGAEFLSFMLLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAE-PRKKRGFLGSFFIGILAAELIVCASNFMVFS--- 116
VYVGA+ V FLF++MML++ G +G IL+ +L+ ++F F
Sbjct: 61 VYVGAIAVLFLFVVMMLNVKKTSTNLGFFAIGPVGLITFFILSNQLLGVFNDFDTFGLKQ 120
Query: 117 ---AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
N++ +GKVLYT+Y++ +SG ILL++M+GAIVL + R D+K+
Sbjct: 121 KDLIWISWITEHNNITNIQAVGKVLYTKYSFLFILSGLILLVAMLGAIVLTMHQRTDVKK 180
Query: 174 QDISKQLESNPDNSIVMVKVK 194
Q I QL N SI + ++
Sbjct: 181 QRIELQLSRNFGGSIKFINLR 201
>gi|68171482|ref|ZP_00544866.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Ehrlichia
chaffeensis str. Sapulpa]
gi|88658094|ref|YP_507364.1| NADH dehydrogenase I, J subunit [Ehrlichia chaffeensis str.
Arkansas]
gi|67999088|gb|EAM85755.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Ehrlichia
chaffeensis str. Sapulpa]
gi|88599551|gb|ABD45020.1| NADH dehydrogenase I, J subunit [Ehrlichia chaffeensis str.
Arkansas]
Length = 200
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 111/198 (56%), Gaps = 5/198 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F+ F+ + ++SS VV V NP+YSV LI F ++ LF+LLGAE +AM+ ++VY
Sbjct: 1 MIYFLFHFFAVLIVLSSISVVYVSNPVYSVLFLILTFFISSTLFILLGAELIAMLVIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF++MMLDI+ + + G++ IV + S
Sbjct: 61 VGAVAVLFLFVVMMLDINYSRLKSGFTKYLAIGLLCGMILFVNIVFVIKQSATTELVTGS 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD-IKRQDISKQLE 181
V +NV IG ++YT+Y Y +SG +LL+S+IG++VL LR + + RQ + Q+
Sbjct: 121 --VSYVSNVIAIGNLIYTKYMYVFHLSGILLLISIIGSLVLTLRTKNGNVYRQSVGAQVN 178
Query: 182 SNPDNSIVMVKVKSGKGI 199
+++ V VK +G+
Sbjct: 179 R--SSTVKYVNVKVRQGV 194
>gi|109156563|ref|YP_654373.1| NADH dehydrogenase subunit 6 [Nematostella sp. JVK-2006]
gi|108744126|gb|ABG02347.1| NADH dehydrogenase subunit 6 [Nematostella sp. JVK-2006]
Length = 199
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 100/194 (51%), Gaps = 19/194 (9%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY SF + S +V++ NP++SVF L+ AF ++A LF+LLG +F+A++ +++YVGA+
Sbjct: 3 FYALSFGTVASGIMVISALNPVHSVFWLVVAFTSSAALFVLLGVDFIALMFVIIYVGAIA 62
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS----------- 116
+ FLF+IMML++ R + ++ I A +
Sbjct: 63 ILFLFVIMMLNLADFSPAFRLGGEADMTNYVPIGLAIGTLFFEAIASSWLIMGGPYVHKS 122
Query: 117 ----AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI- 171
+ K +N+E IG++LYT Y ++ FILL++MIGAIVL ++
Sbjct: 123 SLGTWNLANPWFLTKYHNIEAIGQILYTDCYYLFILASFILLVAMIGAIVLTQEIGSEVG 182
Query: 172 ---KRQDISKQLES 182
K+Q+I Q+
Sbjct: 183 PAAKKQNIFSQISR 196
>gi|296040751|gb|ADG85343.1| NADH dehydrogenase subunit 6 [Silene noctiflora]
Length = 195
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 95/190 (50%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S +VV +NP++SV I F N AGL L LG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSLALVSGLMVVRAKNPVHSVLFFILVFCNTAGLLLFLGLDFFAMIFLVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ I +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEIFFILDNETIPLLPTQRTTISLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TGYTGKVRSWTNLETLGNLLYTYYFVWFLLSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|39995456|ref|NP_951407.1| NADH dehydrogenase I subunit J [Geobacter sulfurreducens PCA]
gi|39982219|gb|AAR33680.1| NADH dehydrogenase I, J subunit [Geobacter sulfurreducens PCA]
gi|298504455|gb|ADI83178.1| NADH dehydrogenase I, J subunit [Geobacter sulfurreducens KN400]
Length = 167
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 1/166 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M++ FF + + +A+++S LV+T +NPI S SLI F A +++L A F+A I ++VY
Sbjct: 1 METFFFTIVAAVAVLASILVITCKNPINSALSLILTFFCLATFYVMLDAPFMAAIQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V +F+IM+L++ E LGS +L + + +GE+S
Sbjct: 61 AGAIMVLIVFVIMLLNVRTEAGRRSSHTVLLGSLVGIFTLVQLFYVLNRSSLTGNKGEIS 120
Query: 123 R-LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
L+ + + E IGK LYT + P E++ +LL+++IGA++L +
Sbjct: 121 PELIHRIGHTEIIGKALYTDFLLPFEVTSILLLVAIIGAVILTKKK 166
>gi|78213918|ref|YP_382697.1| NADH dehydrogenase subunit J [Synechococcus sp. CC9605]
gi|78198377|gb|ABB36142.1| NADH dehydrogenase I chain 6 (or J) [Synechococcus sp. CC9605]
Length = 199
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 81/165 (49%), Gaps = 2/165 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + S + +I + VV + N +YS F L F AGL+LLL A FVAM ++V
Sbjct: 6 TTELICFLVLSAVVVIGALGVVLLSNIVYSAFLLGGVFTAVAGLYLLLNASFVAMAQILV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ V LF IM+++ ++ + A L+ +V +
Sbjct: 66 YVGAINVLILFAIMLVNKREDL--KAIANLTTRRVVSAGVCAGLMALLVRVVVTTPWSLP 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 124 GPVAVGEEATARIGEHLFTDYLLPFEVASVLLLMAMIGAIVLARR 168
>gi|296040749|gb|ADG85342.1| NADH dehydrogenase subunit 6 [Silene latifolia]
Length = 190
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 63/186 (33%), Positives = 93/186 (50%), Gaps = 11/186 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S +VV +NP++SV I F N +GL LLLG +F AMI LVVY+GA+ V
Sbjct: 5 VLSSLALVSGLMVVRAKNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIFLVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNP 184
+ +
Sbjct: 185 RNAIDF 190
>gi|133900462|gb|ABO41397.1| NADH dehydrogenase subunit 6 [Hasseltia floribunda]
gi|133900538|gb|ABO41435.1| NADH dehydrogenase subunit 6 [Prockia crucis]
gi|133900548|gb|ABO41440.1| NADH dehydrogenase subunit 6 [Salix reticulata]
Length = 179
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL +LLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLILLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|294140407|ref|YP_003556385.1| NADH dehydrogenase I subunit J [Shewanella violacea DSS12]
gi|293326876|dbj|BAJ01607.1| NADH dehydrogenase I, J subunit [Shewanella violacea DSS12]
Length = 294
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F + + +AIIS+ L V+ N ++++ L+ + A +F LLG+ F A + ++VY
Sbjct: 1 MIDIIFCITAAVAIISALLTVSAHNVVHALLYLVTMMLAIALIFFLLGSPFAAALQIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV+V F+F+ MML ++ ++ + L+V + + G
Sbjct: 61 AGAVMVLFVFVTMMLHQGERSLVAERQLFNPKVAKGPLILSMLLVIELTMISLGSVGLHQ 120
Query: 123 RLVFKGNNVE----NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
++ VE + L+ Y + ++ +LL +++ AI + +
Sbjct: 121 EILTSPLPVEQTVKQLAIQLFGSYRVLVVLAAIMLLTALVSAIHITKQGN 170
>gi|88608358|ref|YP_505913.1| NADH dehydrogenase I, J subunit [Neorickettsia sennetsu str.
Miyayama]
gi|88600527|gb|ABD45995.1| NADH dehydrogenase I, J subunit [Neorickettsia sennetsu str.
Miyayama]
Length = 189
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 10/194 (5%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ + +AI SSF VV+ RN +++V L+ AF ++ L L+ G E ++++ LVVYVGA
Sbjct: 3 ILCFSLVLVAIFSSFRVVSCRNVVHAVLYLVLAFFTSSVLLLVSGLEVLSLMLLVVYVGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+ + FLF++MML+ D + L + F + + + ++
Sbjct: 63 IAILFLFVVMMLNSDDFEK--------GIGMSVAKYVGLLFMALLPFFLVLSSYDDTQQE 114
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPD 185
+++IG VLYT Y Y +SG +LLL+M+ AI + L +RD K Q + +Q+
Sbjct: 115 RAYIGIKDIGAVLYTDYVYLFHLSGVVLLLAMVAAISIALPSKRDTKCQVVKEQISR--S 172
Query: 186 NSIVMVKVKSGKGI 199
+ + ++ V SGKG+
Sbjct: 173 SVVRLLNVPSGKGV 186
>gi|148657104|ref|YP_001277309.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Roseiflexus
sp. RS-1]
gi|148569214|gb|ABQ91359.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Roseiflexus
sp. RS-1]
Length = 215
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ ++ F +F+ ++++ + VTV+N +++ LI +F L+LL+ AEF+ + +++
Sbjct: 3 TLITILFLVFAVFILVAAIMTVTVKNIVHAALWLISSFFGVGALYLLMEAEFLGVAQVLI 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--EG 119
YVGAV + LF IM+ + + + + L++ +
Sbjct: 63 YVGAVSILILFAIMLTRDLEGSQNRQLTPRWWIALLVPAALFGLLIVPTVMTHAWQLPPP 122
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + + IG +Y P E++ +LL++MIGAIV+ R +R
Sbjct: 123 PPAGQPPSISGAQQIGTAFMREYLLPFEVAAILLLVAMIGAIVVAFEEREQRRR 176
>gi|170077546|ref|YP_001734184.1| NADH dehydrogenase subunit J [Synechococcus sp. PCC 7002]
gi|22651980|gb|AAN03535.1|AF381034_3 NADH dehydrogenase subunit G [Synechococcus sp. PCC 7002]
gi|169885215|gb|ACA98928.1| NADH dehydrogenase subunit G [Synechococcus sp. PCC 7002]
Length = 205
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + M + S+ VV N +YS F L F++ +G ++LL A+FVA +++Y
Sbjct: 7 VQIVSFVILTVMMLGSALGVVLFENIVYSAFLLGGVFISISGFYILLNADFVAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF IM+++ + ++ + G+ + L ++ + +S
Sbjct: 67 VGAINVLILFAIMLVNKKEDFSQMPGRLLRQGATALVCLGLFALLGTMVLVTPWELSTIS 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
GN+V I K ++ + P E++ +LL++M+GAI+L R
Sbjct: 127 PAAV-GNSVVAIAKHFFSDFLLPFELASVLLLIAMVGAIILARR 169
>gi|219847957|ref|YP_002462390.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Chloroflexus aggregans DSM 9485]
gi|219542216|gb|ACL23954.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chloroflexus
aggregans DSM 9485]
Length = 168
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 86/167 (51%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + F + + +AI+ + +V RN ++S L+ F A LFLLL A F+ I L VY
Sbjct: 1 MELILFLITALIAIVGAVAMVVSRNAVHSALFLLLNFAAIAVLFLLLHAPFLFAIQLTVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF++M+L + P + + LA +I +
Sbjct: 61 AGAIMVLFLFVVMLLGAEKVEDAPDRIAWQQPLALVLGLALLVIAVVVGLGGATTPPPDG 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + ++G +L+T Y P E++GFILL++++G +VL R R+
Sbjct: 121 EALVPFTDPRSLGGLLFTDYLLPFEVTGFILLIAVVGVVVLSQRGRK 167
>gi|256425959|ref|YP_003126612.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chitinophaga
pinensis DSM 2588]
gi|256040867|gb|ACU64411.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chitinophaga
pinensis DSM 2588]
Length = 167
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q + F + S ++IIS+ V+ +NP+ SV LI F AG +++L A+F+A++ ++
Sbjct: 3 MSLQQIVFGVLSIISIISALGVILSKNPVTSVLCLIVTFFTIAGHYIMLNAQFLAVVHII 62
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA++V FLF+IM+++++ E+ ++ I L++ + +
Sbjct: 63 VYAGAIMVLFLFVIMLMNLNAEIEPQKRNWLKYAG---AISGGALLLVLLGALREADVTP 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
L + N+GK L+ QY P E+S + L +M+GA+V+ R
Sbjct: 120 LQPGSTDIGLISNLGKTLFNQYVVPFEVSSILFLSAMVGAVVIGKRE 166
>gi|163847541|ref|YP_001635585.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Chloroflexus aurantiacus J-10-fl]
gi|222525391|ref|YP_002569862.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Chloroflexus sp. Y-400-fl]
gi|163668830|gb|ABY35196.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chloroflexus
aurantiacus J-10-fl]
gi|222449270|gb|ACM53536.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chloroflexus
sp. Y-400-fl]
Length = 216
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + ++S+ +VV+VRN I++ LI F L++LL AEF+A++ +++
Sbjct: 3 IVVQIVFGVIALFILVSAAMVVSVRNVIHAALWLIACFFGVGALYMLLEAEFLAVVQVLI 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V LF IM+ + + I +L ++ +
Sbjct: 63 YVGAVSVLILFAIMLTRQITGEGIRQLTTRWPVVLAIAVLLFATVMAPTLINQQWNVPPA 122
Query: 122 SRL--VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ +G+ ++ ++ G +L +++IGAIV+ R ++
Sbjct: 123 PPIGTPEPIAGPAELGRGFVNEFLLQFQVVGVLLTVALIGAIVIAYEERARRRK 176
>gi|333025110|ref|ZP_08453174.1| putative NADH dehydrogenase subunit J [Streptomyces sp. Tu6071]
gi|332744962|gb|EGJ75403.1| putative NADH dehydrogenase subunit J [Streptomyces sp. Tu6071]
Length = 261
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 80/177 (45%), Gaps = 2/177 (1%)
Query: 23 VTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIE 82
+ + ++S L + A +L GA F+ ++ +VVY GAV++ FLF++M++ +
Sbjct: 1 MLMPKAVHSALCLAGTMIVLAVFYLANGAYFLGIVQIVVYTGAVMMLFLFVVMLVGVTAA 60
Query: 83 VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQY 142
+ +G + L ++ ++ + + G NV+ + + ++T Y
Sbjct: 61 DSLKETIKGQRWLAVLCFLGFGALLVGGIGNASVSQFQGTGRANAGGNVQGLAREIFTTY 120
Query: 143 AYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKSGKGI 199
+ EI+G +L+ + +GA+VL R R + R +++ + G+
Sbjct: 121 VFAFEITGALLITATVGAMVLTHRERTE--RALNQREMAEKRVREGKHLPPLPAPGV 175
>gi|257852688|gb|ACV71356.1| NADH dehydrogenase subunit 6 [Abatia parviflora]
Length = 178
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL +LLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLILLGLDFSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + +
Sbjct: 61 IKIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRKTTSLRYTVYAGKIRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|313836209|gb|EFS73923.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL037PA2]
gi|314927644|gb|EFS91475.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL044PA1]
gi|314971357|gb|EFT15455.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium acnes HL037PA3]
gi|328906294|gb|EGG26069.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Propionibacterium sp. P08]
Length = 284
Score = 101 bits (251), Expect = 6e-20, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 94/208 (45%), Gaps = 11/208 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F+L + + + ++ ++V R P++S SL + A + A F+ ++ ++V
Sbjct: 16 TASQWAFWLLAPIMVCAALVIVFARKPVHSALSLAVVMICLAVQYASQEAPFLFVVQIIV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA--------SNFM 113
Y GA+++ FLF++M++ +D + +G + + LA +++
Sbjct: 76 YTGAILMLFLFVVMLVGVDSTDSLKETLKGHKVAAIVAALAFVVLLILAVGNAVTTGVIG 135
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDI 171
G G+NV+ + ++++T+Y E + +L+ + +G +VL ++
Sbjct: 136 TDHPMGLGQANAAGGDNVKLLAELVFTKYVIVFEATSALLITAAVGTMVLAHGEADKKKT 195
Query: 172 KRQDISKQLESNPDNSIVMVKVKSGKGI 199
+R+ ++ ++ + V+ G+
Sbjct: 196 QRERVTDRMAVYAQHGSH-PGVRPNSGV 222
>gi|313768527|ref|YP_004062202.1| NADH dehydrogenase subunit 6 [Gracilariopsis andersonii]
gi|312844654|gb|ADR03218.1| NADH dehydrogenase subunit 6 [Gracilariopsis andersonii]
Length = 202
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 113/201 (56%), Gaps = 7/201 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + LFS AI++S +V+++ N ++SV LI F N AGL LLLGAEF++ + L+
Sbjct: 1 MYTDLFLYLLFSSFAILASLMVISLSNAVHSVLFLILVFCNVAGLLLLLGAEFLSFMLLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAE-PRKKRGFLGSFFIGILAAELIVCASNFMVFS--- 116
VYVGA+ V FLF++MML++ G +G IL +L+ ++F F
Sbjct: 61 VYVGAIAVLFLFVVMMLNVKKTSTNLGFFAIGPIGLITFFILINQLLGIFNDFDTFGLKQ 120
Query: 117 ---AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
N++ +GKVLYT+Y++ +SG ILL++M+GAIVL + R D+K+
Sbjct: 121 KDLIWISWITEHNNLTNIQAVGKVLYTKYSFLFILSGLILLVAMLGAIVLTMHQRTDVKK 180
Query: 174 QDISKQLESNPDNSIVMVKVK 194
Q I QL N SI + ++
Sbjct: 181 QKIELQLNRNFGGSIKFINLR 201
>gi|13449312|ref|NP_085495.1| NADH dehydrogenase subunit 6 [Arabidopsis thaliana]
gi|48474289|sp|P60498|NU6M_BRACM RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|12768|emb|CAA48326.1| NADH dehydrogenase subunit 6 [Brassica rapa]
gi|6851015|emb|CAA69769.3| NADH dehydrogenase subunit 6 [Arabidopsis thaliana]
gi|80978898|gb|ABB54698.1| NADH dehydrogenase subunit 6 [Brassica oleracea var. botrytis]
Length = 205
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFFAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|133900454|gb|ABO41393.1| NADH dehydrogenase subunit 6 [Flacourtia jangomas]
gi|133900536|gb|ABO41434.1| NADH dehydrogenase subunit 6 [Populus maximowiczii]
gi|257852690|gb|ACV71357.1| NADH dehydrogenase subunit 6 [Idesia polycarpa]
Length = 178
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL +LLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLILLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|269836330|ref|YP_003318558.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sphaerobacter
thermophilus DSM 20745]
gi|269785593|gb|ACZ37736.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sphaerobacter
thermophilus DSM 20745]
Length = 242
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 91/177 (51%), Gaps = 4/177 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + L F + +A++++ VV R P++S SL+ +FVN A ++++L AEF+A ++
Sbjct: 1 MSAEVLVFDILGAVAVLAAAGVVLARKPVHSALSLVVSFVNVAAIYVILRAEFLAAAQII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDI----EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS 116
VY GA++V LF+IM++ + P ++ L + + + +
Sbjct: 61 VYTGAILVLVLFVIMLVHPEDLPEFHGGRPIQRVLALILGLVLLGEVLAAILTRTVVGQP 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G N + +G+VLY+ Y P++ + +LL++ IGA+VL ++R
Sbjct: 121 GPWSEQAVQAVGGNTQALGQVLYSGYVLPIQATALLLLVATIGALVLARPETPRVRR 177
>gi|22298211|ref|NP_681458.1| NADH dehydrogenase subunit J [Thermosynechococcus elongatus BP-1]
gi|22294390|dbj|BAC08220.1| NADH dehydrogenase subunit 6 [Thermosynechococcus elongatus BP-1]
Length = 200
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q++ F+ + II++ VV + N +YS F L F++ AGL++L+ A+FV+ +++YV
Sbjct: 8 QTITFFALAAAVIIAALGVVLLDNVVYSAFLLGGVFLSIAGLYILMNADFVSAAQILIYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ + G + + + M+ +LS
Sbjct: 68 GAVNVLILFAIMLVNKRETYTPVPGRWLRQGG---AAVVSLGVFALLTKMILQTPWQLSS 124
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +++ IG+ ++ + P E++ +LL+++IGA+VL R
Sbjct: 125 VPPTPDSITTIGQHFFSDFLLPFELASVLLLMALIGAVVLARRE 168
>gi|149909812|ref|ZP_01898463.1| putative oxidoreductase [Moritella sp. PE36]
gi|149807144|gb|EDM67100.1| putative oxidoreductase [Moritella sp. PE36]
Length = 190
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 91/176 (51%), Gaps = 6/176 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ FF L + +AI + LVV RNPI+S SL+ FV A LF+LLG+ F+A+I L VY
Sbjct: 1 MEQQFFILLALVAIGTGLLVVVARNPIHSALSLVACFVQIAALFVLLGSPFLAVIQLFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL- 121
VGA++V FLF+IMMLD+ E L+ A+ + ++
Sbjct: 61 VGAIMVLFLFVIMMLDVRKEAHGRFINNSRFIQKGAIPAIVALLALATELLFLLSQSSRL 120
Query: 122 -----SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
++ V + + L+ + P E++ ILL+++IGA+VL + + K
Sbjct: 121 HAVMTTQSVIGDEPTKQLSLTLFRDFLLPFEVASVILLVALIGAVVLAQSNGTNHK 176
>gi|332708450|ref|ZP_08428426.1| NADH dehydrogenase subunit J [Lyngbya majuscula 3L]
gi|332352781|gb|EGJ32345.1| NADH dehydrogenase subunit J [Lyngbya majuscula 3L]
Length = 208
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + + S + I ++ VV + N +YS F L F+ +GL++LL A+FVA +++Y
Sbjct: 7 VQIISVAILSVIMIGAALGVVLLSNIVYSAFLLAGVFIGISGLYILLNADFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + K+ GS I + ++ +
Sbjct: 67 VGAVNVLILFAIMLVNKREDFQPMTKRWVRTGSTAIVCIGLFALLSTMVLATPWSVEIDP 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+V VE IG+ ++ + P E++ +LL++M+GAI++ R
Sbjct: 127 AMVVTNTAVE-IGQHFFSDFLLPFELASVLLLMAMVGAIIIARR 169
>gi|119513555|ref|ZP_01632572.1| NADH dehydrogenase subunit J [Nodularia spumigena CCY9414]
gi|119461788|gb|EAW42808.1| NADH dehydrogenase subunit J [Nodularia spumigena CCY9414]
Length = 221
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + + M I ++ VV N +YS F L F++ A ++LLL +FVA ++VY
Sbjct: 24 VQFVALGILGVMMIGAALGVVLFSNVVYSAFMLGGVFISMAAIYLLLNGDFVAAAQVLVY 83
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + A P G + + + +
Sbjct: 84 VGAVNVLILFAIMLVNKREDFA-PFPSTGLRKVLTAVVSLGLFGLLSVMVLGTPWAYSTP 142
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V +++ IG+ +T + P E++ +LL++M+GAI+L R
Sbjct: 143 AAVAPESSIVVIGEHFFTDFLLPFELASVLLLIAMVGAIILARRE 187
>gi|220907087|ref|YP_002482398.1| NADH dehydrogenase subunit J [Cyanothece sp. PCC 7425]
gi|219863698|gb|ACL44037.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Cyanothece
sp. PCC 7425]
Length = 207
Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q++ L M I S+ VV + N +YS F L F++ AG +LLL A+FV+ +++Y
Sbjct: 7 VQTVSVVLLGLMMIGSALGVVLLNNIVYSAFLLGGVFISMAGFYLLLNADFVSAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + A + G+ +++ L +V + S
Sbjct: 67 VGAVNVLILFAIMLVNKREDFAPVAGRWIRQGAA--ALVSLGLFALLGTMVVQTPWPIPS 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + IG+ ++ + P E++ +LL++++GA+VL R
Sbjct: 125 VASTVTSTLVVIGEHFFSDFLLPFELASVLLLMALVGAVVLARRE 169
>gi|94968320|ref|YP_590368.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Candidatus
Koribacter versatilis Ellin345]
gi|94550370|gb|ABF40294.1| NADH dehydrogenase subunit J [Candidatus Koribacter versatilis
Ellin345]
Length = 169
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 95/166 (57%), Gaps = 1/166 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
V FFY + +++ S+ V+ +N ++S LIF + AGL+L+L A FVA + +++
Sbjct: 4 VATPFFFYFLAALSVGSALGVILRKNAVHSAIFLIFTLLAQAGLYLMLYAPFVAGVQIIL 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V FLF+IM+++++ + E + + +L + L +++ +
Sbjct: 64 YAGGIMVLFLFVIMLVNLERSLKEEQFNKQWLAGSAVAALFGVMLLLIYRNGGGTFPSTR 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ ++ + +N ++IG +LY Y P E++ +LL++++GA+V+ +
Sbjct: 124 A-ILPEASNTQDIGVMLYRNYMLPFEVASLLLLVAIVGAVVMAKKR 168
>gi|313672287|ref|YP_004050398.1| NADH dehydrogenase subunit j [Calditerrivibrio nitroreducens DSM
19672]
gi|312939043|gb|ADR18235.1| NADH dehydrogenase subunit J [Calditerrivibrio nitroreducens DSM
19672]
Length = 166
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 97/165 (58%), Gaps = 1/165 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ L FY+ +F+AIISS ++T NP++S ++ F + AG+F+ L AEF+A I ++VY
Sbjct: 1 MEQLGFYILAFVAIISSLFMITRENPVHSALWMLLTFFSVAGIFVQLNAEFIAAIQVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V +LF++M+L+ + R LG ++ ++++ + V G+ +
Sbjct: 61 AGAILVLYLFVVMLLNPKSKGFIKIPFRYALGIVASFVVLIQILITLQSANVIGRSGQYT 120
Query: 123 RLVFK-GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+++ NV+ G L+ Y P EI +LL++MIGAIVL +
Sbjct: 121 AEIYEKYGNVKIFGYELFNNYLVPFEIVSVMLLVAMIGAIVLAKK 165
>gi|261420755|ref|YP_003254437.1| NADH dehydrogenase subunit J [Geobacillus sp. Y412MC61]
gi|319768425|ref|YP_004133926.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
sp. Y412MC52]
gi|261377212|gb|ACX79955.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
sp. Y412MC61]
gi|317113291|gb|ADU95783.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
sp. Y412MC52]
Length = 173
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F+L + AI ++ + N ++ V +L+ FV AGL++LL AEFVA++ ++
Sbjct: 1 MSGTDIAFFLLALAAIAGGVTMLQLTNVVHMVIALVMTFVGIAGLYVLLSAEFVAVVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + LF IM+ + E + G + L+ A F + +
Sbjct: 61 IYSGAITIIMLFAIMLTRHHTDERERQTTGGVW-HKAVAALSVIAFGLAVYFGIRQLDFG 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G+N + IGK LY+ Y P EI ILL+++IGAIVL + +
Sbjct: 120 ADGSALSGDNAKAIGKSLYSYYTIPFEIVSVILLVALIGAIVLAKKDGKG 169
>gi|23268295|gb|AAN11292.1| NADH dehydrogenase subunit 6 [Lupinus albus]
Length = 205
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AE 118
FLF++M+ I I R S IG++ + +
Sbjct: 65 FLFVVMLFHIQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRKTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTQVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|9280596|gb|AAF86486.1|AF279439_1 NADH dehydrogenase subunit 6 [Lupinus luteus]
gi|9280600|gb|AAF86488.1|AF279441_1 NADH dehydrogenase subunit 6 [Lupinus mutabilis]
Length = 205
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AE 118
FLF++MM I I R S IG++ + +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRKTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTQVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|297531550|ref|YP_003672825.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
sp. C56-T3]
gi|297254802|gb|ADI28248.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
sp. C56-T3]
Length = 173
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F+L + AI ++ + N ++ V +L+ F+ AGL++LL AEFVA++ ++
Sbjct: 1 MSGTDIAFFLLALAAIAGGVTMLQLTNVVHMVIALVMTFLGIAGLYVLLSAEFVAVVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + LF IM+ + E G + L+ A F + +
Sbjct: 61 IYSGAITIIMLFAIMLTRHHTDERERPTTGGVW-HKAVAALSVIAFGLAVYFGIRQLDFG 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G+N + IGK LY+ Y P EI ILL+++IGAIVL + +
Sbjct: 120 ADGSALSGDNAKAIGKSLYSYYTIPFEIVSVILLVALIGAIVLAKKDGKG 169
>gi|224178046|ref|YP_002600968.1| subunit 6 of NADH-plastoquinone oxidoreductase [Pyramimonas
parkeae]
gi|215882713|gb|ACJ71086.1| subunit 6 of NADH-plastoquinone oxidoreductase [Pyramimonas
parkeae]
Length = 172
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 1/168 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q F +F+F++I S VV N +Y+ F L V+ AG +LLL A+F+A ++
Sbjct: 1 MNLQDFCFSIFTFLSITGSLGVVFFPNLVYAAFFLGVTLVSVAGFYLLLNADFLAAAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVG + + LF IM++D + V P K+ G LA L + + +++
Sbjct: 61 LYVGGINILILFAIMLVDANARVTRPDSKKTNPFWIVQGSLAVGLFLLLTK-VIYITPWP 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ N V IG+ +++ + +P E+ +LL+++IG +VL R +
Sbjct: 120 SPPFIPVTNTVYFIGRHIFSDFLFPFELVSILLLIALIGVVVLAKREQ 167
>gi|78224536|ref|YP_386283.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Geobacter
metallireducens GS-15]
gi|78195791|gb|ABB33558.1| NADH dehydrogenase subunit J [Geobacter metallireducens GS-15]
Length = 167
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M++ FF + + +A+++S LV+T +NPI S SLI F A L++ L A F+A I ++VY
Sbjct: 1 METFFFMIVAAVAVLASILVITCKNPINSALSLILTFFCLATLYVTLDAPFMAAIQVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE-L 121
GA++V +F+IM+L++ E GS +L + + +G
Sbjct: 61 AGAIMVLIVFVIMLLNVRTESGRRSSHSVLFGSLIGLFSLFQLFYLFNRSSLTGQKGAID 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S L+ K + E IGK LYT + P E++ +LL+++IGA+VL +
Sbjct: 121 SALINKVGHTELIGKALYTDFLLPFEVTSILLLVAIIGAVVLTKKK 166
>gi|86606291|ref|YP_475054.1| NADH dehydrogenase subunit J [Synechococcus sp. JA-3-3Ab]
gi|86554833|gb|ABC99791.1| NADH-ubiquinone/plastoquinone oxidoreductase, subunit 6
[Synechococcus sp. JA-3-3Ab]
Length = 202
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + S MAI + VV N +YS F L F++ AGL+LLL A+FVA +++Y
Sbjct: 7 VQLVTFGVLSAMAIGFALGVVWAPNIVYSGFLLGGVFLSMAGLYLLLNADFVAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ A + G L ++ A
Sbjct: 67 VGAVNVLILFAIMLVNRRYTFAPLKLGWLRNGVTAAVCLGLFALLTAMALNTPWQL---- 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ ++ +G ++ Y P E++ +LL+++IGAIVL R
Sbjct: 123 EPIQPTSSALVMGGHFFSDYLLPFELASVLLLMALIGAIVLARRE 167
>gi|315605119|ref|ZP_07880171.1| NADH-quinone oxidoreductase subunit J [Actinomyces sp. oral taxon
180 str. F0310]
gi|315313226|gb|EFU61291.1| NADH-quinone oxidoreductase subunit J [Actinomyces sp. oral taxon
180 str. F0310]
Length = 325
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + V+ + ++V ++ + A L++ A F+ + +VV
Sbjct: 13 TGEIILFVCTAIAMVACALGVLFCKKAAHAVICMVGVMLGLAILYIANSAPFMGVAQIVV 72
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRG-FLGSFFIGILAAELIVCASNFMVFSAEGE 120
Y GA+++ FLF+IM++ I R+ RG +GS G+ A +I A +A
Sbjct: 73 YTGAIMMLFLFVIMLIGIGASDDYVRQSRGAIVGSVLGGLGLALIIATAIVKSSHAAHAP 132
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ ++ +L+ ++ +E++G +L+ + +GA++L R K
Sbjct: 133 SKATPTSDEPITDLAIMLFQEHWLSMELAGALLITAAVGAMLLTHSDRLTAK 184
>gi|145932445|ref|YP_001165357.1| NADH dehydrogenase subunit 6 [Phytophthora ramorum]
gi|110169643|gb|ABG54108.1| NADH dehydrogenase subunit 6 [Phytophthora ramorum]
gi|188484472|gb|ACD50861.1| NADH dehydrogenase subunit 6 [Phytophthora ramorum]
Length = 236
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 39/231 (16%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++FFY FS +A+ S+ V+ N IYS F LI F N+ GL L+ EF++++ ++
Sbjct: 1 MNFETIFFYTFSTIALTSAIFVIYSTNTIYSAFFLILVFTNSTGLLLISEVEFLSIMLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGF-----LGSFFIGILAAELIVCASNFMVF 115
+YVGA+ V FLF+IMMLD++I + + + + I+ + F +
Sbjct: 61 IYVGAITVLFLFVIMMLDVNILIDKNKINNNLGYLPIIFLISFIFFLETFIMFSKVFTSY 120
Query: 116 SAEGELS----------------------------------RLVFKGNNVENIGKVLYTQ 141
S V N+E IG++LY+
Sbjct: 121 YHLINNSFFNKEVNTLFFFKDSMKGTFEIFVDVKPFLKNFINQVDTITNIETIGQILYSY 180
Query: 142 YAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVK 192
YA+ +G ILL+++IGA+ L + +R +Q I KQL + +I V
Sbjct: 181 YAFFFLAAGIILLIALIGAVTLTKKEKRKNFKQKIYKQLSRDSLKAIFNVN 231
>gi|317968122|ref|ZP_07969512.1| NADH:ubiquinone oxidoreductase subunit J [Synechococcus sp. CB0205]
Length = 199
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 79/163 (48%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q + F S I + VV + + +YS F L F++ AGL+LLL A FVA ++VYV
Sbjct: 8 QFICFVCLSAAVAIGALGVVLLPSIVYSAFLLGGVFLSVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++A + F G + A L +
Sbjct: 68 GAVNVLILFAIMLVNKKEDLAA--IPGLAVRRFLSGAVCAGLFALLLRVAFTTPWALPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
IG+ L++ Y P E++ +LL++MIGAIVL R
Sbjct: 126 TPIGEEATIRIGEHLFSDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|323649908|ref|YP_004237281.1| NADH dehydrogenase subunit 6 [Ricinus communis]
gi|322394288|gb|ADW96045.1| NADH dehydrogenase subunit 6 [Ricinus communis]
Length = 217
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 60/201 (29%), Positives = 93/201 (46%), Gaps = 13/201 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V
Sbjct: 5 VLSSPALVSGLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDI 176
+ V N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDL 184
Query: 177 SKQLESNPDNSIVMVKVKSGK 197
++ + +I+ +
Sbjct: 185 FRRNAIDFRRTIMRRTTDPSQ 205
>gi|86608754|ref|YP_477516.1| NADH dehydrogenase subunit J [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557296|gb|ABD02253.1| NADH-ubiquinone/plastoquinone oxidoreductase, subunit 6
[Synechococcus sp. JA-2-3B'a(2-13)]
Length = 202
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + S MAI + VV + +YS F L F++ AGL+LLL A+FVA +++Y
Sbjct: 7 VQLVTFVVLSAMAIGFALGVVWAPSIVYSGFLLGGVFLSMAGLYLLLNADFVAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ A + G + L ++ A
Sbjct: 67 VGAVNVLILFAIMLVNRRYNFAPLKLGWLRNGVTAVVCLGLFALLAAMALNTPWPL---- 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + ++V IG ++ Y P E++ +LL+++IGAIVL R
Sbjct: 123 QPIQPLSSVLVIGGHFFSDYLLPFELASVLLLMALIGAIVLARRE 167
>gi|11466641|ref|NP_066324.1| NADH dehydrogenase subunit 6 [Malawimonas jakobiformis]
gi|10178679|gb|AAG13691.1|AF295546_17 NADH dehydrogenase subunit 6 [Malawimonas jakobiformis]
Length = 190
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 10/188 (5%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY +S + I+S+ +V+ V NPI+S+ LI F+N +GL +LL EF+A+ ++VY
Sbjct: 1 MSEILFYFYSILTIVSAIMVIAVTNPIHSILFLILVFINVSGLLILLEVEFLAITLIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG--- 119
VGA+ V FL + MM +I I V+ I I+ ++ N S
Sbjct: 61 VGAIAVLFLSVTMMPNIKIVVSNLNLLHYIPIGGIITIIFLLEMIICFNNDFISIFNLNN 120
Query: 120 -------ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + N+E+IG ++YT Y ISGFILLL+M GAIVL L +IK
Sbjct: 121 INDFDFIQWTNELKHMTNIESIGILIYTHYYDLFIISGFILLLAMNGAIVLTLHINNNIK 180
Query: 173 RQDISKQL 180
RQ I Q+
Sbjct: 181 RQQIFFQI 188
>gi|320095558|ref|ZP_08027221.1| NADH-quinone oxidoreductase subunit J [Actinomyces sp. oral taxon
178 str. F0338]
gi|319977466|gb|EFW09146.1| NADH-quinone oxidoreductase subunit J [Actinomyces sp. oral taxon
178 str. F0338]
Length = 318
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 89/199 (44%), Gaps = 3/199 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F + + + V+ + +S ++ + A L++ A F+ + +VVY
Sbjct: 16 EAVLFACTAVFMVACALGVLFFKKAAHSAVCMVGVMLGLAVLYIANNAPFLGVAQIVVYT 75
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GA+++ FLF+IM++ I + RG + + +G L + V A+ + +
Sbjct: 76 GAIMMLFLFVIMLIGIGESDDYALQGRGRIIAAVLGGLGLAVCVTAAVVHSTADARTAAP 135
Query: 124 L-VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK--RQDISKQL 180
+ + + ++ +L+ ++ +E++G +L+ + +GA+VL R K + ++
Sbjct: 136 VDPYSNAPITDLAVMLFERHWLSMELAGGLLITAALGAMVLTHSDRLVPKADQAQTARSK 195
Query: 181 ESNPDNSIVMVKVKSGKGI 199
+ + G+
Sbjct: 196 MRAFAQTGRRIGQLPAPGV 214
>gi|17227721|ref|NP_484269.1| NADH dehydrogenase subunit J [Nostoc sp. PCC 7120]
gi|28201839|sp|Q8Z075|NU6C_ANASP RecName: Full=NAD(P)H-quinone oxidoreductase chain 6; AltName:
Full=NAD(P)H dehydrogenase I, chain 6; AltName:
Full=NDH-1, chain 6; AltName: Full=NDH-G
gi|17135203|dbj|BAB77749.1| NADH dehydrogenase subunit 6 [Nostoc sp. PCC 7120]
Length = 202
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + M I ++ VV + +YS F L F++ AG++LLL +FVA ++VY
Sbjct: 7 VQVVSFGILATMLIGTALGVVLATSIVYSAFLLGGVFISIAGMYLLLNGDFVAAAQVLVY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + I++ L S ++ + +
Sbjct: 67 VGAVNVLILFAIMLVNKRQDFTP--YPSAGIRKVLTAIVSVGLFALLSTMVLATPWAYST 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
++ IG+ ++ + P E++ +LL++M+GAI+L R
Sbjct: 125 TPKVGDGSIIVIGEHFFSDFLLPFELASVLLLMAMVGAIILARRE 169
>gi|302521255|ref|ZP_07273597.1| NADH dehydrogenase subunit I J [Streptomyces sp. SPB78]
gi|302430150|gb|EFL01966.1| NADH dehydrogenase subunit I J [Streptomyces sp. SPB78]
Length = 263
Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F LF + ++ + VT + +++ L+ A +LLL AEF+A + +++YVG
Sbjct: 21 EIAFVLFGLLTFGAALVTVTTKQLVHAALWLVVTLGGLAVEYLLLTAEFIAWVQVLIYVG 80
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I ++ R + + +LAA +V F
Sbjct: 81 SVVVLLLFGLMLTRAPIGRSDDADSRNRPLAAAVALLAAAGLVWVVTD-AFRTTYIHLDG 139
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G L+ + P E +LL +++GAIVL R
Sbjct: 140 AHPQGTTAVTGAFLFRHWVLPFEALSVLLLAALVGAIVLSRRRDDG 185
>gi|75908928|ref|YP_323224.1| NADH dehydrogenase subunit J [Anabaena variabilis ATCC 29413]
gi|75702653|gb|ABA22329.1| NADH dehydrogenase subunit J [Anabaena variabilis ATCC 29413]
Length = 202
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + M I ++ VV + +YS F L F++ AG++LLL +FVA ++VY
Sbjct: 7 VQVVSFGILATMLIGTALGVVLASSIVYSAFLLGGVFISIAGMYLLLNGDFVAAAQVLVY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + I++ L S ++ + +
Sbjct: 67 VGAVNVLILFAIMLVNKRQDFIP--YPSAGIRKILTAIVSVGLFALLSTMVLATPWAYST 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
++ IG+ ++ + P E++ +LL++M+GAI+L R
Sbjct: 125 TPKVGDGSIIVIGEHFFSDFLLPFELASVLLLMAMVGAIILARRE 169
>gi|317134163|ref|YP_004123416.1| NADH dehydrogenase subunit 6 [Corticium candelabrum]
gi|308912772|gb|ADO51527.1| NADH dehydrogenase subunit 6 [Corticium candelabrum]
Length = 197
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 97/191 (50%), Gaps = 14/191 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY ++S +V++ NPI+SVF LI F A+ LF+LL +F+A+I L+VYVGA+
Sbjct: 4 LFYAIVLAVLVSGIMVISALNPIHSVFWLIAVFGGASALFILLNIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS--------------NF 112
+ FLF+IMML++ + +G+ I N
Sbjct: 64 AILFLFVIMMLNLTDLESAGDMSNYIPIGSVMGVFLLFEIFIVGREAIVYSNRDTDYENL 123
Query: 113 MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ ++S + +N+E +G++LY Y Y ++ FILL++MIGAIVL ++K
Sbjct: 124 IDVLDFWDVSIEIINFSNIEALGRILYIDYFYSFLLASFILLVAMIGAIVLTHELGIELK 183
Query: 173 RQDISKQLESN 183
RQD+ Q
Sbjct: 184 RQDLFIQTSRK 194
>gi|163854294|ref|YP_001633640.1| NADH dehydrogenase subunit 6 [Negombata magnifica]
gi|163639449|emb|CAM06605.1| NADH dehydrogenase subunit 6 [Negombata magnifica]
Length = 195
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/181 (33%), Positives = 99/181 (54%), Gaps = 4/181 (2%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+F IIS +V++ N ++SV LI +F +A LF+ L +F+A+I L+VYVGA+ +
Sbjct: 7 VFCMFLIISGIMVISALNSVHSVLWLIVSFTSAVVLFIFLEVDFIALIFLIVYVGAIAIL 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS----AEGELSRLV 125
FLF+IMML++ F IG++ ++ ++ + +
Sbjct: 67 FLFVIMMLNLTDLRGLLDMSNYMPVGFIIGVVVFFEVLLFFSWGFGDLLEGIDYFRWDFL 126
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPD 185
K +N++ +G++LYT YAY ++ FILL++MIGAIVL R IK+Q+ Q+ D
Sbjct: 127 EKISNIQVLGELLYTNYAYLFILASFILLVAMIGAIVLTFSERSQIKKQESFIQISRELD 186
Query: 186 N 186
Sbjct: 187 E 187
>gi|88607226|ref|YP_505038.1| NADH dehydrogenase I, J subunit [Anaplasma phagocytophilum HZ]
gi|88598289|gb|ABD43759.1| NADH dehydrogenase I, J subunit [Anaplasma phagocytophilum HZ]
Length = 201
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F+ F+ M + S+ VV NP+Y+V SLI F ++ LF+LLGAE VAM+ +VVY
Sbjct: 1 MVGFLFFCFAGMVVFSAVAVVISSNPVYAVLSLILTFFISSVLFILLGAELVAMLLVVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAEGEL 121
VGAV V FLF++MMLD+D + R + + L + G
Sbjct: 61 VGAVAVLFLFVVMMLDMDFVKSSHGFVRYYPICVALATALFGCATYAIFHTKAAFIRGIG 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR-RDIKRQDISKQL 180
NV IG +YT+Y Y ++SG +LL++ IGA+VL +R + ++Q++ Q+
Sbjct: 121 EAGASAMGNVFLIGSQMYTKYFYAFQMSGILLLVASIGALVLTVRSKAVKSRKQNVYAQV 180
Query: 181 ESNPDNSIVMVKVKSGKGI 199
+ + + + KGI
Sbjct: 181 --DRSSKVELCSPAVCKGI 197
>gi|159899733|ref|YP_001545980.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Herpetosiphon aurantiacus ATCC 23779]
gi|159892772|gb|ABX05852.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Herpetosiphon
aurantiacus ATCC 23779]
Length = 174
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 74/165 (44%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M++ F + +A+ ++ +V N ++S LI F + A L+ LL A F+ + + VY
Sbjct: 1 METFLFITTAIVAVGAALAMVLSSNAVHSALFLILNFCSVAILYFLLRAPFLGAVQVTVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF+IM+L + K + + +A + + +
Sbjct: 61 AGAIMVLFLFVIMLLGAENAELGEEKIGWQKPAGLVLGVALLAEIGYVAYRGTTLIDAPV 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
I L++ Y P E+ +LL++++G +VL R
Sbjct: 121 ADATNIGAPTTISAKLFSTYLLPFEVISILLLIAVVGTVVLTRRR 165
>gi|72163085|ref|YP_290742.1| NADH dehydrogenase subunit J [Thermobifida fusca YX]
gi|71916817|gb|AAZ56719.1| NADH dehydrogenase I chain J [Thermobifida fusca YX]
Length = 286
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/197 (20%), Positives = 87/197 (44%), Gaps = 5/197 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++ FY+ + ++++ VV R +YS + + A + + A F+ ++ +VVY
Sbjct: 17 ETATFYILGSIVVLAALGVVFSRRAVYSALMMAVVMIGLAVFYGINEAPFLMVVQIVVYT 76
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC--ASNFMVFSAEGEL 121
GAV++ FLF++M++ + + RG + L + + S+ + G
Sbjct: 77 GAVLMLFLFVLMLVGVSSSDSLVETIRGHRLLTAVIALCFLVPLVSGLSSIVAGEPVGLS 136
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ + G ++ + + +Y E +G +L+ +++GA+VL R KR KQ+
Sbjct: 137 AGVAAAGGSIPWLASEIIYRYVIAFEATGALLITAVLGALVLAHAVRTKKKR--TQKQMS 194
Query: 182 SNPDNSIVMVKVKSGKG 198
+ G G
Sbjct: 195 MDRI-RSGHPTPLPGPG 210
>gi|94985025|ref|YP_604389.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Deinococcus
geothermalis DSM 11300]
gi|94555306|gb|ABF45220.1| NADH dehydrogenase subunit J [Deinococcus geothermalis DSM 11300]
Length = 197
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 1/162 (0%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F +A++ + + V RN +++ L+ ++ AGLF L A F+A ++VY GA
Sbjct: 2 IAFIFLGALALVGAVITVAARNAVHAALGLVGTLLSVAGLFASLNAAFLAATQVIVYAGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF-SAEGELSRL 124
++V FLF+IM+L+ + ++ IG + F
Sbjct: 62 IMVLFLFVIMLLNANQPISGRDPVPFVRELAGIGGVLLAGAFAVLAFTYRDPRPLAEGAA 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+G N +G+VL T++ P E +LL++++GAI L+ R
Sbjct: 122 ALQGGNAAPVGEVLLTRFLLPFEAVSILLLVAIVGAIALVQR 163
>gi|301061344|ref|ZP_07202126.1| NADH-quinone oxidoreductase, chain I [delta proteobacterium NaphS2]
gi|300444663|gb|EFK08646.1| NADH-quinone oxidoreductase, chain I [delta proteobacterium NaphS2]
Length = 299
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
++S+ L V+ R +++V LI +F A LF LLGA F+A + +++Y GAV+V FLFII
Sbjct: 136 LVVSTGLAVSQRKLVHAVVFLIISFFATALLFYLLGAPFLAALEVIIYAGAVMVMFLFII 195
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M L ++ E E F IL + + +++ + + L +
Sbjct: 196 MTLKLEKEEPESGTSLRPW---FPAILLGGISLVLLVTLLWMGQDHGALLKLAMAAPREV 252
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
GK L+ ++ + +E+ F+L +++ GA+ L H++ K D ++
Sbjct: 253 GKYLFREFWFSVEVVSFLLFVALAGALYLAKEHKKPTKTADSQQEAS 299
>gi|167627162|ref|YP_001677662.1| NADH dehydrogenase I subunit J [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|241667724|ref|ZP_04755302.1| NADH dehydrogenase I, J subunit [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876268|ref|ZP_05248978.1| NADH dehydrogenase I [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|167597163|gb|ABZ87161.1| NADH dehydrogenase I, J subunit [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254842289|gb|EET20703.1| NADH dehydrogenase I [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 201
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/199 (30%), Positives = 107/199 (53%), Gaps = 6/199 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV+ + FY+F+ +AIIS+ ++V NP+ SV ++IF FV A ++++ ++A++ +V
Sbjct: 1 MVVTDILFYIFASLAIISALVLVLANNPVNSVIAMIFTFVFTAAVWIIFQQVYLALLLIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++ MLD+ E + + G F I+ + ++
Sbjct: 61 VYVGAVLVMFLFVVFMLDL---HVEKQGRVGRFFYAFAAIIVCAIFATVISYAATKVFAG 117
Query: 121 LSRLVFKGNNVENIGKVLYTQ-YAYPLEISGFILLLSMIGAIVLMLR-HRRDIKRQDISK 178
S + ++ IG ++ Y E+ FILL +M AI L LR R+ K + ++
Sbjct: 118 DS-MQGGVGGLKIIGLTMFDNSNLYVFELVDFILLAAMTAAITLTLRSKRKGNKSVNPAQ 176
Query: 179 QLESNPDNSIVMVKVKSGK 197
Q++ + + MVK+ S +
Sbjct: 177 QVKVRAKDRLTMVKIPSNR 195
>gi|189426178|ref|YP_001953355.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter
lovleyi SZ]
gi|189422437|gb|ACD96835.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter
lovleyi SZ]
Length = 170
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 94/168 (55%), Gaps = 1/168 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + S+FF L + +AI+S+ +VVT +NPI S SL+ F A + +L A F+A + ++
Sbjct: 1 MDISSVFFALVTVVAIVSALMVVTCKNPINSALSLVLTFFCLATYYAMLNAPFMAAVQII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS-FFIGILAAELIVCASNFMVFSAEG 119
VY GA++V +F IM+L+I ++ + + LGS I L + +
Sbjct: 61 VYAGAIMVLIVFTIMLLNIRVDANKKGSHQIALGSVIGIATLLLSGLFLTRGKVSQPVGQ 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S L+ + E IGKV++T + P E++ +LL++++GA++L R
Sbjct: 121 ITSELINSKGHTELIGKVMFTDFLLPFEVTSILLLVAIVGAVILAKRK 168
>gi|158335316|ref|YP_001516488.1| NADH dehydrogenase subunit J [Acaryochloris marina MBIC11017]
gi|158305557|gb|ABW27174.1| proton-translocating NAD(P)H-quinone oxidoreductase, chain J,
putative [Acaryochloris marina MBIC11017]
Length = 198
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 2/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + L S M + ++ VV + +YS F+L F++ AGL++LL A+FV+ +++Y
Sbjct: 7 VQLVSLILLSVMMLGAALGVVLFESIVYSAFTLGAVFISIAGLYILLNADFVSAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + R ++ ++ L + ++ +
Sbjct: 67 VGAVNVLILFAIMLVNKTEDFKP--LPRRWIRKVSTAFVSLALFTLLATMVLQTNWPVDV 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
L ++VE IG +T Y P E++ +LL++++GA+VL R
Sbjct: 125 ALAPPASSVETIGIHFFTDYLLPFELASILLLMALVGAVVLARRE 169
>gi|318077268|ref|ZP_07984600.1| NADH dehydrogenase I chain J [Streptomyces sp. SA3_actF]
Length = 267
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F LF + ++ + VT + +++ L+ A +LLL AEF+A + +++YVG
Sbjct: 25 EIAFVLFGLLTFGAALVTVTTKQLVHAALWLVVTLGGLAVEYLLLTAEFIAWVQVLIYVG 84
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I ++ R + + +LAA +V F
Sbjct: 85 SVVVLLLFGLMLTRAPIGRSDDADSRNRPLAAAVALLAAAGLVWVVTD-AFRTTYIHLDG 143
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G L+ + P E +LL +++GAIVL R
Sbjct: 144 AHPQGTTAVTGAFLFRHWVLPFEALSVLLLAALVGAIVLSRRRDDG 189
>gi|323149050|ref|YP_004222818.1| NADH dehydrogenase subunit 6 [Vigna radiata]
gi|308206756|gb|ADO19893.1| NADH dehydrogenase subunit 6 [Vigna radiata]
Length = 205
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AE 118
FLF++MM I I R S IG++ + +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQINTTSLIY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|196249744|ref|ZP_03148440.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
sp. G11MC16]
gi|196210620|gb|EDY05383.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
sp. G11MC16]
Length = 173
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F+L + AI ++ + N ++ V +L+ F+ AGL++LL AEFVA++ ++
Sbjct: 1 MSGTDIAFFLLALAAIAGGVTMLQLTNVVHMVIALVMTFLGIAGLYVLLSAEFVAVVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + LF IM+ + E + G + ++ A F + +
Sbjct: 61 IYSGAITIIMLFAIMLTRHHADDKERQTTGGVW-HRAVAAISVLAFGLAVYFGIRRLDFG 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+N IGK LY+ Y P EI ILL+++IGAIVL + +
Sbjct: 120 ADGSALATDNAREIGKWLYSYYTIPFEIVSVILLVALIGAIVLAKKDGKG 169
>gi|133900564|gb|ABO41448.1| NADH dehydrogenase subunit 6 [Trigonia nivea]
Length = 179
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ I + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEIFFILDNETIPLLPTQRNTTSLRYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|56421884|ref|YP_149202.1| NADH dehydrogenase subunit J [Geobacillus kaustophilus HTA426]
gi|56381726|dbj|BAD77634.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Geobacillus
kaustophilus HTA426]
Length = 173
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F+L + AI ++ + N ++ V +L+ F+ AGL++LL AEFVA++ ++
Sbjct: 1 MSGTDIAFFLLALAAIAGGVTMLQLTNVVHMVIALVMTFLGIAGLYVLLSAEFVAVVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + LF IM+ + E + G + L+ A F + +
Sbjct: 61 IYSGAITIIMLFAIMLTRHHTDERERQTTGGVW-HKAVAALSVIAFGLAVYFGIRQLDFG 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G+N + IGK+LY+ Y P EI ILL+++IGAIVL + +
Sbjct: 120 ADGSALAGDNAKAIGKLLYSYYTIPFEIVSVILLVALIGAIVLAKKDGKG 169
>gi|56791570|gb|AAW30323.1| NADH dehydrogenase subunit 6 [Pinus thunbergii]
Length = 186
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 11/182 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++ I F N +GL +LLG + AMI+ VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVVRAKNPVHPASFPIPVFRNTSGLLILLGPDLPAMISPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
L ++MML++ I + R S IG++ +
Sbjct: 65 SLPVVMMLNMKIAEIHEKVSRYPPVSGIIGLILRWEMFFIPDNDHIPSLPTCISTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + N E G L+T Y+ +S I ++MIGA VL + +KRQD+ +
Sbjct: 125 TVHAGEIQSWTNSETSGNSLHTYYSVRFSVSSPIPSVAMIGATVLTMHRTTRVKRQDVFR 184
Query: 179 QL 180
+
Sbjct: 185 RN 186
>gi|284039759|ref|YP_003389689.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Spirosoma
linguale DSM 74]
gi|283819052|gb|ADB40890.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Spirosoma
linguale DSM 74]
Length = 185
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 11/181 (6%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L FY F+ + + + V+ RN +Y+ F L+ AGLF+L GA+F+A+ +++Y
Sbjct: 1 MVQLAFYFFAALTLGGALAVLLTRNVLYAAFFLLLTLFGVAGLFVLAGADFLAVAQIMIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL-----------GSFFIGILAAELIVCASN 111
VG V+V +F +M+ + ++ G ++A L V
Sbjct: 61 VGGVLVLVIFGVMLTHKPEPPTDLNSQQPNRIVSANRFAKGAGWIIPVLVAGALFVALQT 120
Query: 112 FMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ S L + N IGK L T+Y P EI+G +LL +++GA L H +
Sbjct: 121 LLARSNFALLDQPAGWQNTTTVIGKQLMTEYVVPFEIAGILLLAALVGATYLAASHTKSS 180
Query: 172 K 172
+
Sbjct: 181 R 181
>gi|317097375|ref|YP_004123584.1| NADH dehydrogenase subunit 6 [Plakina monolopha]
gi|308912589|gb|ADO51356.1| NADH dehydrogenase subunit 6 [Plakina monolopha]
Length = 197
Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 98/191 (51%), Gaps = 14/191 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY + ++S +V++ NPI+SVF LI F+ A+ LF+LL +F+A+I L+VYVGA+
Sbjct: 4 LFYAITLAVLVSGIMVISALNPIHSVFWLIAVFLGASALFILLNIDFIALIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE-------- 118
+ FLF+IMML++ +G+ I +
Sbjct: 64 AILFLFVIMMLNLTDLEGAGDMSNFIPIGSVMGVFLLFEIFIIGREAIVYNNRDSDYENL 123
Query: 119 ------GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
++S + K N+E +G +LYT Y Y ++ FILL++MIGAIVL ++K
Sbjct: 124 TDVLGFWDVSIEIIKFYNIEVLGXILYTDYFYSFILASFILLVAMIGAIVLTQELGIELK 183
Query: 173 RQDISKQLESN 183
RQD+ Q N
Sbjct: 184 RQDLFIQTSRN 194
>gi|113475269|ref|YP_721330.1| NADH dehydrogenase subunit J [Trichodesmium erythraeum IMS101]
gi|110166317|gb|ABG50857.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Trichodesmium erythraeum IMS101]
Length = 207
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 85/164 (51%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + M I ++ VV N ++S F L F++ +GL+LLL A+FVA +++Y
Sbjct: 7 VQFVSFVILAVMMIAAALGVVLFSNIVHSAFLLGGVFMSISGLYLLLNADFVATAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + F + + ++ + S +
Sbjct: 67 VGAVNVLILFAIMLVNKREDF-KALPNAWFRKVATGLVCFGLFALLSTMVLSSSWSIPVV 125
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +++ IGK +T + P E++ LL++M+GAI+L R
Sbjct: 126 GNATRESSIVLIGKHFFTDFLLPFELASVCLLIAMVGAIILARR 169
>gi|9280598|gb|AAF86487.1|AF279440_1 NADH dehydrogenase subunit 6 [Lupinus angustifolius]
Length = 205
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 59/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V
Sbjct: 5 VLSSPALVSGLMVAHAKNPVHSVLFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AE 118
FLF++MM I I R S IG++ + +
Sbjct: 65 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRKTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ +
Sbjct: 125 TVYAGKVRSWTNLETLGNLLYTYYFVWFLVGSLILLVAMIGAIVLTMHRTTQVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDFRRTI 194
>gi|318056641|ref|ZP_07975364.1| NADH dehydrogenase I chain J [Streptomyces sp. SA3_actG]
Length = 267
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F LF + ++ + VT + +++ L+ A +LLL AEF+A + +++YVG
Sbjct: 25 EIAFVLFGLLTFGAALVTVTTKQLVHAALWLVVTLGGLAVEYLLLTAEFIAWVQVLIYVG 84
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I ++ R + + +LAA +V F
Sbjct: 85 SVVVLLLFGLMLTRAPIGRSDDADSRNRPLAAAVALLAAAGLVWVVTD-AFRTTYIHLDG 143
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G L+ + P E +LL +++GAIVL R
Sbjct: 144 AHPQGTTAVTGAFLFRHWVLPFEALSVLLLAALVGAIVLSRRRDDG 189
>gi|296103961|ref|YP_003614107.1| NADH dehydrogenase subunit J [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295058420|gb|ADF63158.1| NADH dehydrogenase subunit J [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 184
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFALGAHFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPIGAKEVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|284039951|ref|YP_003389881.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Spirosoma
linguale DSM 74]
gi|283819244|gb|ADB41082.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Spirosoma
linguale DSM 74]
Length = 184
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
S+ VVT RNPIYSV +LI F +G ++LL A+F+A + ++VY GA++V FLF IM L
Sbjct: 28 SAIGVVTARNPIYSVLALIATFFCLSGHYVLLNAQFLAAVNIIVYAGAIMVLFLFTIMFL 87
Query: 78 DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR-LVFKGNNVENIGK 136
++ E E + + S +G + +++ + K VEN+G+
Sbjct: 88 NLRKEDEESKTNLTKMASVVVGGMLMIMLITIFRAKSAQVPTVSATSFSAKTGLVENLGQ 147
Query: 137 VLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+LY+ Y P E++ + L++M+GA++L R
Sbjct: 148 LLYSDYILPFELASVLFLVAMVGAVMLGKRE 178
>gi|317097078|ref|YP_004123217.1| NADH dehydrogenase subunit 6 [Plakortis halichondrioides]
gi|308912711|gb|ADO51470.1| NADH dehydrogenase subunit 6 [Plakortis halichondrioides]
Length = 197
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 62/190 (32%), Positives = 99/190 (52%), Gaps = 14/190 (7%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY + ++S +V++ NPI+SVF LI F+ A+ LF+LL +F+A+I L+VYVGA+
Sbjct: 5 FYAITLAVLVSGIMVISALNPIHSVFWLIAVFLGASALFILLNIDFIALIFLIVYVGAIA 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR---- 123
+ LF+IMML++ +G+ I + + G+ +
Sbjct: 65 IXXLFVIMMLNLTDLEGVGDMSNYIPIGSVMGVFLLFEIFIIGREAIVYSNGDTNYGXLM 124
Query: 124 ----------LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ K +N+E +G+VLYT Y Y ++ FILL++MIGAIV ++KR
Sbjct: 125 DVLDFSDVSLEIIKFSNIEALGRVLYTDYFYSFLLASFILLVAMIGAIVXTHELGIELKR 184
Query: 174 QDISKQLESN 183
QD+ Q N
Sbjct: 185 QDLFIQTSRN 194
>gi|138896927|ref|YP_001127380.1| NADH dehydrogenase subunit J [Geobacillus thermodenitrificans
NG80-2]
gi|134268440|gb|ABO68635.1| NADH dehydrogenase I, J subunit [Geobacillus thermodenitrificans
NG80-2]
Length = 173
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F+L + AI ++ + N ++ V +L+ F+ AGL++LL AEFVA++ ++
Sbjct: 1 MSGTDIAFFLLALAAIAGGVTMLQLTNVVHMVIALVMTFLGIAGLYVLLSAEFVAVVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + LF IM+ + E + G + ++ A F + +
Sbjct: 61 IYSGAITIIMLFAIMLTRHHADDKERQTTGGVW-HRAVAAISVLAFGLAVYFGIRRLDFG 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+N IGK LY+ Y P EI ILL+++IGAIVL + +
Sbjct: 120 ADGSALAADNAREIGKWLYSYYTIPFEIVSVILLVALIGAIVLAKKDGKG 169
>gi|317048931|ref|YP_004116579.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Pantoea sp.
At-9b]
gi|316950548|gb|ADU70023.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pantoea sp.
At-9b]
Length = 183
Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + ++ AG+F +GA F + ++VY G
Sbjct: 2 EFAFYLCGLVAVLTTLRVITHTNPVHALLYLIVSLLSIAGVFFSMGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + ++ + + + L++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGKSQQDQEREWLKPSLWIGPGIVSLLLLVVMIYAI--STAHDQGI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R+
Sbjct: 120 DGTVIDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREERQG 165
>gi|124024376|ref|YP_001018683.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9303]
gi|123964662|gb|ABM79418.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Prochlorococcus marinus str. MIT 9303]
Length = 200
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F + + ++ S VV + N +YS F L F+ AGL+LLL A FVA ++VYV
Sbjct: 8 ELICFLVLGAVVVLGSLGVVLLGNIVYSAFLLGGVFMAVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++ + G + A L V ++ +
Sbjct: 68 GAVNVLILFAIMLVNKREDLKPIE--GLPIRRLLSGGVCAGLFVLFFRVVITTPWAVPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
E IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 126 AAIGVGATERIGEHLFTDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|33864283|ref|NP_895843.1| NADH dehydrogenase subunit J [Prochlorococcus marinus str. MIT
9313]
gi|33641063|emb|CAE22192.1| putative NADH Dehydrogenase (complex I) subunit (chain 6)
[Prochlorococcus marinus str. MIT 9313]
Length = 200
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 2/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F + + ++ S VV + N +YS F L F+ AGL+LLL A FVA ++VYV
Sbjct: 8 ELICFLVLGAVVVLGSLGVVLLGNIVYSAFLLGGVFMAVAGLYLLLNASFVAAAQVLVYV 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV V LF IM+++ ++ + G + A L V ++ +
Sbjct: 68 GAVNVLILFAIMLVNKREDLKPIE--GLPIRRLLSGGVCAGLFVLFFRVVITTPWAVPGP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
E IG+ L+T Y P E++ +LL++MIGAIVL R
Sbjct: 126 AAIGVGATERIGEHLFTDYLLPFELASVLLLMAMIGAIVLARR 168
>gi|313206206|ref|YP_004045383.1| NADH dehydrogenase subunit j [Riemerella anatipestifer DSM 15868]
gi|312445522|gb|ADQ81877.1| NADH dehydrogenase subunit J [Riemerella anatipestifer DSM 15868]
gi|315023109|gb|EFT36122.1| NADH-ubiquinone oxidoreductase chain J [Riemerella anatipestifer
RA-YM]
gi|325336347|gb|ADZ12621.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Riemerella
anatipestifer RA-GD]
Length = 165
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 94/164 (57%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + FY+ S +A+IS+ V +NP+YS+ SL+ F + AGL++LL A+F+ ++ ++VY
Sbjct: 1 MEQIVFYIISGLAVISAIYFVAAKNPLYSILSLVITFFSIAGLYILLNAQFLGIVQIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FL+++MML++ + + F L V A V E ++
Sbjct: 61 AGAIMVLFLYVLMMLNLKEKDEGKKNNLMKFAGIFSAGLLLVGFVGALRGYV-GNELPVT 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +N+G++L+ +Y P E++ ++L ++GA+++ +
Sbjct: 120 EITEGVGLTKNLGRLLFNEYVLPFELASILILSGIVGAVLIGKK 163
>gi|269977607|ref|ZP_06184574.1| NADH dehydrogenase subunit j [Mobiluncus mulieris 28-1]
gi|307701312|ref|ZP_07638333.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Mobiluncus
mulieris FB024-16]
gi|269934210|gb|EEZ90777.1| NADH dehydrogenase subunit j [Mobiluncus mulieris 28-1]
gi|307613473|gb|EFN92721.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Mobiluncus
mulieris FB024-16]
Length = 352
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q++F + S A++ V R +++ ++ ++ AG++ LGAEF+ + +VVY
Sbjct: 21 QAIFLAVASGAALVCGLSVAFSRRAVHAAVYMLGMMISLAGIYFSLGAEFLGAVQIVVYT 80
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GA+++ LF+IM++ + A +R + + + +A ++ + +
Sbjct: 81 GAIMMMILFVIMLVGVQSIDAPRESERVTVVAAVLMAVALAILAIVAASHTTMNALIKAP 140
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
N V+ I + QY +P+E+ +L+++ +GA+ L
Sbjct: 141 DNPADNPVQ-IAGAIINQYYFPMEMVACLLIIAAVGAMTLTH 181
>gi|306817877|ref|ZP_07451616.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|304649356|gb|EFM46642.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
Length = 352
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q++F + S A++ V R +++ ++ ++ AG++ LGAEF+ + +VVY
Sbjct: 21 QAIFLAVASGAALVCGLSVAFSRRAVHAAVYMLGMMISLAGIYFSLGAEFLGAVQIVVYT 80
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GA+++ LF+IM++ + A +R + + + +A ++ + +
Sbjct: 81 GAIMMMILFVIMLVGVQSIDAPRESERVTVVAAVLMAVALAILAIVAASHTTMNALIKAP 140
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
N V+ I + QY +P+E+ +L+++ +GA+ L
Sbjct: 141 DNPADNPVQ-IAGAIINQYYFPMEMVACLLIIAAVGAMTLTH 181
>gi|148266245|ref|YP_001232951.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Geobacter
uraniireducens Rf4]
gi|146399745|gb|ABQ28378.1| NADH dehydrogenase subunit J [Geobacter uraniireducens Rf4]
Length = 168
Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats.
Identities = 58/167 (34%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++SLFF + + +A+ISS LV+T +NPI S SL+ F A +++L A F+A I ++V
Sbjct: 1 MLESLFFIIVAAVAVISSILVITCKNPINSALSLVMTFFCLATFYVMLDAPFMAAIQVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA++V +F+IM+L+I E GS ++ + + +G +
Sbjct: 61 YAGAIMVLIVFVIMLLNIRTETGRKTTHAILAGSIIGLLVLFQTCYFLFRSSLTGNKGVM 120
Query: 122 -SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ LV + +VE IGK LYT++ P EI+ +LL+++IGA++L R
Sbjct: 121 DTALVERVGHVELIGKALYTEFLLPFEITSLLLLVAIIGAVILTKRK 167
>gi|6137794|ref|NP_009264.1| NADH dehydrogenase subunit 6 [Metridium senile]
gi|3914175|sp|O47498|NU6M_METSE RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|913914|gb|AAB32500.1| NADH dehydrogenase complex subunit 6 [Metridium senile]
gi|2920996|gb|AAC04641.1| NADH dehydrogenase subunit 6 [Metridium senile]
Length = 202
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 19/199 (9%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M +++F+ SF + S +V++ NP++SVF L+ AF+++A LF+LLG +F+A++ +++Y
Sbjct: 1 MVTMYFFTLSFGTVASGIMVISALNPVHSVFWLVVAFISSAALFILLGVDFIALMFIIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------ 116
VGA+ + FLF+IMML++ R+ + ++ I A +
Sbjct: 61 VGAIAILFLFVIMMLNLTDFTPAFRRGGEADMTNYVPIGLAVGTLFFEAIASSWLIMGGP 120
Query: 117 ---------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + K +N+E IG++LYT Y + FILL++M+GAIVL
Sbjct: 121 YVYRGLLGAWDLANPWFLKKYHNIEAIGRILYTDCYYLFILVSFILLVAMLGAIVLTQEI 180
Query: 168 RRDI----KRQDISKQLES 182
+I K+QDI Q
Sbjct: 181 GTEIGPTAKKQDIFVQTSR 199
>gi|312131903|ref|YP_003999243.1| NADH dehydrogenase subunit j [Leadbetterella byssophila DSM 17132]
gi|311908449|gb|ADQ18890.1| NADH dehydrogenase subunit J [Leadbetterella byssophila DSM 17132]
Length = 178
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/168 (28%), Positives = 93/168 (55%), Gaps = 1/168 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FY F+ +A+ + + + P++SV +LI F + +G+++LL A+F+A++ ++VY
Sbjct: 9 MVEWVFYFFAVLALCGALGTILSKKPMHSVIALIITFFSLSGIYVLLNAQFLAVVNIIVY 68
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF+IM L++ E E R L + G++ ++V F+ ++
Sbjct: 69 AGAIMVLFLFVIMFLNLRQESNELRNTPMILAATISGLILVLMLVAVYRKAYFAPVNPVT 128
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +EN+G +LY Y P E+ + L+++ GAI++ R +
Sbjct: 129 FRA-ETGMIENLGTLLYRHYMLPFELVSVLFLVAISGAILIGKREKGG 175
>gi|257453975|ref|ZP_05619251.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Enhydrobacter aerosaccus SK60]
gi|257448640|gb|EEV23607.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Enhydrobacter aerosaccus SK60]
Length = 214
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ FYL + +AI++S V+T NP++++ ++I + +G+F LGA F + ++V
Sbjct: 3 TGATIGFYLLAIVAILASLRVITRTNPVHALLNMIVTLLALSGIFFALGAPFAGALEIIV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI----GILAAELIVCASNFMVFSA 117
Y GA++V F+F++MML++ + + ++ + + +
Sbjct: 63 YAGAIMVLFVFVVMMLNLGTQSTLEEESWLSSSAWAVPAGLAFIVGLTLFSLIGMKHGFE 122
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + IG L+T+Y +EI+GF+LL ++ A L
Sbjct: 123 GIMPAFIGVEPVTAKMIGAKLFTEYLLLVEIAGFLLLAGLVAAYHLAK 170
>gi|152971208|ref|YP_001336317.1| NADH dehydrogenase subunit J [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238895797|ref|YP_002920533.1| NADH dehydrogenase subunit J [Klebsiella pneumoniae NTUH-K2044]
gi|262043320|ref|ZP_06016449.1| NADH-quinone oxidoreductase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330003564|ref|ZP_08304679.1| NADH-quinone oxidoreductase subunit J [Klebsiella sp. MS 92-3]
gi|150956057|gb|ABR78087.1| NADH dehydrogenase subunit J [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238548115|dbj|BAH64466.1| NADH dehydrogenase subunit J [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259039344|gb|EEW40486.1| NADH-quinone oxidoreductase [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328536904|gb|EGF63203.1| NADH-quinone oxidoreductase subunit J [Klebsiella sp. MS 92-3]
Length = 184
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ VVT NP++++ LI + + AG+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVVTHTNPVHALLYLIISLLAIAGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E +K G + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGTEIEQERKWLQPGIWIGPAILSAVLLVVIVYAILGINDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
N + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGAAINAKEVGIALFGPYVLAVELASMLLLAGLVVAFHIGREERAG 165
>gi|311278763|ref|YP_003940994.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Enterobacter
cloacae SCF1]
gi|308747958|gb|ADO47710.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Enterobacter
cloacae SCF1]
Length = 184
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + AG+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAIAGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPGILSVVLLAVIVYGIIGLNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL ++ A L R+
Sbjct: 120 DGNAIGAKEVGIALFGPYVLAVELASMLLLAGLVVAFHLGREERQG 165
>gi|23464626|ref|NP_696994.1| NADH dehydrogenase subunit 6 [Monosiga brevicollis ATCC 50154]
gi|23344088|gb|AAN28364.1| NADH dehydrogenase subunit 6 [Monosiga brevicollis]
Length = 228
Score = 98.6 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 28/209 (13%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M Y+FS A S LV++ +NPI SV L+ F N++ L L+LG EF+A++ L+VY
Sbjct: 1 MIETLVYIFSIGAFFSGILVISSKNPINSVLGLVMCFANSSILLLMLGFEFLALLFLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA------------- 109
VGA+ + FLF++MML+I + R IGI+ ++
Sbjct: 61 VGALAILFLFVVMMLNIRLVELIENFTRYLPIGGIIGIIFILELMVIVDEQFAMSSNNLF 120
Query: 110 ---------------SNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILL 154
N + + N+E+IG++LYT +S +LL
Sbjct: 121 TQLFFINNPYELSLFMNSYSVDITSNYNNNIVNLTNIESIGQILYTHGYIYFIVSSIVLL 180
Query: 155 LSMIGAIVLMLRHRRDIKRQDISKQLESN 183
++M+GAIVL L H + +KRQDI Q+ +
Sbjct: 181 IAMVGAIVLTLYHEQGVKRQDIFSQISTQ 209
>gi|227874593|ref|ZP_03992756.1| NADH dehydrogenase subunit J [Mobiluncus mulieris ATCC 35243]
gi|227844802|gb|EEJ54948.1| NADH dehydrogenase subunit J [Mobiluncus mulieris ATCC 35243]
Length = 353
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 80/162 (49%), Gaps = 1/162 (0%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q++F + S A++ V R +++ ++ ++ AG++ LGAEF+ + +VVY
Sbjct: 21 QAIFLAVASGAALVCGLSVAFSRRAVHAAVYMLGMMISLAGIYFSLGAEFLGAVQIVVYT 80
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GA+++ LF+IM++ + A +R + + + +A ++ + +
Sbjct: 81 GAIMMMILFVIMLVGVQSIDAPRESERVTVVAAVLMAVALAILAIVAASHTTMNALIKAP 140
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
N V+ I + QY +P+E+ +L+++ +GA+ L
Sbjct: 141 DNPADNPVQ-IAGAIINQYYFPMEMVACLLIIAAVGAMTLTH 181
>gi|133900396|gb|ABO41364.1| NADH dehydrogenase subunit 6 [Bischofia javanica]
Length = 179
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 177
>gi|206577065|ref|YP_002237332.1| NADH-quinone oxidoreductase, J subunit [Klebsiella pneumoniae 342]
gi|288934262|ref|YP_003438321.1| NADH dehydrogenase (quinone) [Klebsiella variicola At-22]
gi|290508465|ref|ZP_06547836.1| NADH dehydrogenase I subunit J [Klebsiella sp. 1_1_55]
gi|206566123|gb|ACI07899.1| NADH-quinone oxidoreductase, J subunit [Klebsiella pneumoniae 342]
gi|288888991|gb|ADC57309.1| NADH dehydrogenase (quinone) [Klebsiella variicola At-22]
gi|289777859|gb|EFD85856.1| NADH dehydrogenase I subunit J [Klebsiella sp. 1_1_55]
Length = 184
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ VVT NP++++ LI + + AG+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVVTHTNPVHALLYLIISLLAIAGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E +K G + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERKWLQPGIWIGPAILSAVLLVVIVYAILGINDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
N + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGAAINAKEVGIALFGPYVLAVELASMLLLAGLVVAFHIGREERAG 165
>gi|133900456|gb|ABO41394.1| NADH dehydrogenase subunit 6 [Galearia filiformis]
gi|257852660|gb|ACV71342.1| NADH dehydrogenase subunit 6 [Panda oleosa]
Length = 178
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTGYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|5042150|emb|CAB44670.1| NDH-G protein [Nostoc sp. PCC 7120]
Length = 202
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + M I + VV + +YS F L F++ AG++LLL +FVA ++VY
Sbjct: 7 VQVVPFGILATMLIGPALGVVLATSIVYSAFLLGGVFISIAGMYLLLNGDFVAAAQVLVY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + I++ L S ++ + +
Sbjct: 67 VGAVNVLILFAIMLVNKRQDFTP--YPSAGIRKVLTAIVSVGLFALLSTMVLATPWAYST 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
++ IG+ ++ + P E++ +LL++M+GAI+L R
Sbjct: 125 TPKVGDGSIIVIGEHFFSDFLLPFELASVLLLMAMVGAIILARRE 169
>gi|146312466|ref|YP_001177540.1| NADH dehydrogenase subunit J [Enterobacter sp. 638]
gi|145319342|gb|ABP61489.1| NADH dehydrogenase subunit J [Enterobacter sp. 638]
Length = 184
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFALGAHFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGAEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKEVGIALFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|134299886|ref|YP_001113382.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Desulfotomaculum reducens MI-1]
gi|134052586|gb|ABO50557.1| NADH dehydrogenase subunit J [Desulfotomaculum reducens MI-1]
Length = 172
Score = 98.2 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F L S + + S+ LVVT++N ++SV LI F+ AG+FLLL A+FVAM+ ++VY GA
Sbjct: 8 IAFVLLSGLVLGSALLVVTLKNLVHSVLWLIVTFIGVAGIFLLLNADFVAMVQVLVYAGA 67
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V + F +M++ + I + + ++ LS
Sbjct: 68 VCIMIAFGVMLVQRQDM----ENSNPMNSRYKIAFPLIGGLFISIGLLMARTRWTLSGEA 123
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
V+ + +L T Y P E++ +L +++ GA+VL+ + + R
Sbjct: 124 VPEKTVQGLAPILLTDYVIPFEVAAVLLTVALTGALVLVKEVKANGDR 171
>gi|284050277|ref|ZP_06380487.1| NADH dehydrogenase subunit J [Arthrospira platensis str. Paraca]
gi|291568239|dbj|BAI90511.1| NADH dehydrogenase subunit 6 [Arthrospira platensis NIES-39]
Length = 206
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F L + M I S+ VV ++N +YS F L F++ AGL+LLL A+FVA +++Y
Sbjct: 7 VQVVSFGLLTIMMISSALGVVLLKNIVYSAFLLGGVFMSMAGLYLLLNADFVAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VG+V V LF IM+++ + L ++ L S ++ + +
Sbjct: 67 VGSVNVLILFGIMLVNKQQDF--RVLPNAGLRQIATAVVCVGLFALLSTMVLSTPWSVTA 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+V ++ IG+ +T + P E++ LL++M+GAIVL R
Sbjct: 125 AVVSIESSAIAIGEHFFTDFLLPFELASVFLLMAMVGAIVLARR 168
>gi|133900552|gb|ABO41442.1| NADH dehydrogenase subunit 6 [Sauvagesia erecta]
Length = 179
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV LI F + +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFLILVFRDTSGLLLFLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVSRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTNSLRYMVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|237732311|ref|ZP_04562792.1| NADH:ubiquinone oxidoreductase [Citrobacter sp. 30_2]
gi|283832290|ref|ZP_06352031.1| NADH-quinone oxidoreductase, J subunit [Citrobacter youngae ATCC
29220]
gi|226907850|gb|EEH93768.1| NADH:ubiquinone oxidoreductase [Citrobacter sp. 30_2]
gi|291071935|gb|EFE10044.1| NADH-quinone oxidoreductase, J subunit [Citrobacter youngae ATCC
29220]
Length = 184
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGISLFGPYVLAVELASMLLLAGLVVAFHVGREERSG 165
>gi|295098081|emb|CBK87171.1| NADH dehydrogenase subunit J [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 184
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFALGAHFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLAVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERVG 165
>gi|146298997|ref|YP_001193588.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Flavobacterium johnsoniae UW101]
gi|146153415|gb|ABQ04269.1| NADH dehydrogenase subunit J [Flavobacterium johnsoniae UW101]
Length = 179
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 93/163 (57%), Gaps = 1/163 (0%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F + + + +I++FL + RNPI+S L+ F + AG +LLL ++F+A++ ++VY GA
Sbjct: 15 VIFCILALITVITAFLTIFSRNPIHSAIYLVICFFSIAGHYLLLNSQFLAVVHIIVYSGA 74
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+++ FLF IM+++++ + R + LG+ + +++ A G+
Sbjct: 75 IMILFLFTIMLMNLNEQKDVHRPRITRLGAI-VSFCLIVIVLIAIFINSKPIVGDYDSTG 133
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
++E +GK+L +Y P E + +LL++MIG ++L + +
Sbjct: 134 EDFQSIEVLGKILLNEYMVPFEFASILLLVAMIGTVLLSKKEK 176
>gi|269218346|ref|ZP_06162200.1| NADH dehydrogenase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212205|gb|EEZ78545.1| NADH dehydrogenase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 321
Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 82/170 (48%), Gaps = 1/170 (0%)
Query: 4 QSLFFYLFSFMAI-ISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+++ F + + + + ++ F ++ R +YS +I V A L+ L A F+ ++ + VY
Sbjct: 13 ETILFGVVAVVMVTLTVFGLLVTRRAVYSAVCVIADMVCLAVLYTALEAPFMGVVQIAVY 72
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA+++ FLF++MM+ +D + RG +G L I + +
Sbjct: 73 TGAILMMFLFVLMMIGVDAADSTYETLRGQRVMAALGALGFAAIAGGAVMDARTPGPVGL 132
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ N I K ++T +A +E++G +L+++ +GA+ L R +
Sbjct: 133 AKANEETNPTAIAKSIFTNHALTMELTGALLIVAAVGAMTLTHRQGVRKR 182
>gi|222053579|ref|YP_002535941.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
FRC-32]
gi|221562868|gb|ACM18840.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
FRC-32]
Length = 168
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 59/167 (35%), Positives = 95/167 (56%), Gaps = 1/167 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++SLFF + + +A+ISS LV+T RNPI S SL+ F A +++L A F+A I ++V
Sbjct: 1 MLESLFFLIVAAVAVISSILVITCRNPINSALSLVMTFFCLATFYVMLDAPFMAAIQVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-NFMVFSAEGE 120
Y GA++V +F+IM+L+I E GS ++ + + M
Sbjct: 61 YAGAIMVLIVFVIMLLNIRTETGRKTTHAVLAGSIVGLLILFQTCYFLTKGSMTGLTGAM 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ L+ K +VE IGK LYT + P EI+ +LL+++IGA++L R
Sbjct: 121 DTALIEKVGHVELIGKALYTDFLLPFEITSLLLLVAIIGAVILSKRK 167
>gi|166895624|ref|YP_001661418.1| NADH dehydrogenase subunit 6 [Cycas taitungensis]
gi|166706956|dbj|BAF98420.1| NADH dehydrogenase subunit 6 [Cycas taitungensis]
Length = 201
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 11/190 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++ +VV NP++ V I F N +GL +L G + AMI+ VV++GA+ V
Sbjct: 5 VSSSPALVPGLMVVRAENPVHPVSFPIPVFRNTSGLLILSGPDLSAMISPVVHIGAIAVL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAE---------- 118
F ++MML+I I + R S IG IL E+ + N + S
Sbjct: 65 FSSVVMMLNIQIAEIHEKVSRYSPVSGLIGPILRWEMFLILDNDHIPSLPTYIGTTSLRY 124
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + N E +G +L+T Y+ +S + L++MIGAIVL + +KRQD+ +
Sbjct: 125 TVHAGEIQSWTNSETLGNLLHTYYSVRFLVSSPVPLVAMIGAIVLTMHRTTKVKRQDVFR 184
Query: 179 QLESNPDNSI 188
+ + +I
Sbjct: 185 RNAIDSRRTI 194
>gi|261340668|ref|ZP_05968526.1| NADH dehydrogenase I, J subunit [Enterobacter cancerogenus ATCC
35316]
gi|288317082|gb|EFC56020.1| NADH dehydrogenase I, J subunit [Enterobacter cancerogenus ATCC
35316]
Length = 184
Score = 97.8 bits (242), Expect = 7e-19, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFALGAHFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGIALFGPYVLAVELASMLLLAGLVVAFHVGREERVG 165
>gi|257852646|gb|ACV71335.1| NADH dehydrogenase subunit 6 [Lozania pittieri]
Length = 178
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 177
>gi|257852664|gb|ACV71344.1| NADH dehydrogenase subunit 6 [Aporusa frutescens]
Length = 178
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI +Q
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRQNA 174
>gi|332184787|gb|AEE27041.1| NADH-ubiquinone oxidoreductase chain J [Francisella cf. novicida
3523]
Length = 201
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 107/198 (54%), Gaps = 6/198 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV+ ++ FY F+ +AIIS+ ++V NP+ SV ++IF F+ A ++++L ++A++ +V
Sbjct: 1 MVVTNILFYTFASLAIISALVLVLANNPVNSVIAMIFTFIFTAAVWIILQQVYLALLLIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++ MLD+ E + + G ++ + ++ +
Sbjct: 61 VYVGAVLVMFLFVVFMLDL---HVEEQGRVGRFFYALAAVVVCAIFATVISYAATNVFAG 117
Query: 121 LSRLVFKGNNVENIGKVLYTQ-YAYPLEISGFILLLSMIGAIVLMLR-HRRDIKRQDISK 178
+ + ++ IG ++ Y E+ FILL +M AI L LR R+ K + ++
Sbjct: 118 -AMMQGGVGGLKIIGLTMFNNANLYVFELVDFILLAAMTAAITLTLRAKRKGNKTVNPAQ 176
Query: 179 QLESNPDNSIVMVKVKSG 196
Q++ + + MVK+ S
Sbjct: 177 QVKVRAKDRLTMVKMPSN 194
>gi|320196147|gb|EFW70771.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli WV_060327]
Length = 184
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPVSAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|133900572|gb|ABO41452.1| NADH dehydrogenase subunit 6 [Dillenia philippinensis]
Length = 179
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFFIPVFCDTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAMD 176
>gi|133900460|gb|ABO41396.1| NADH dehydrogenase subunit 6 [Goupia glabra]
Length = 179
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|118498232|ref|YP_899282.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
novicida U112]
gi|194324416|ref|ZP_03058189.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family
[Francisella tularensis subsp. novicida FTE]
gi|208780259|ref|ZP_03247601.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family
[Francisella novicida FTG]
gi|254373573|ref|ZP_04989059.1| hypothetical protein FTCG_01670 [Francisella tularensis subsp.
novicida GA99-3549]
gi|254375040|ref|ZP_04990520.1| hypothetical protein FTDG_01228 [Francisella novicida GA99-3548]
gi|118424138|gb|ABK90528.1| NADH dehydrogenase I, J subunit [Francisella novicida U112]
gi|151571297|gb|EDN36951.1| hypothetical protein FTCG_01670 [Francisella novicida GA99-3549]
gi|151572758|gb|EDN38412.1| hypothetical protein FTDG_01228 [Francisella novicida GA99-3548]
gi|194321481|gb|EDX18966.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family
[Francisella tularensis subsp. novicida FTE]
gi|208743908|gb|EDZ90210.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family
[Francisella novicida FTG]
gi|332678968|gb|AEE88097.1| NADH-ubiquinone oxidoreductase chain J [Francisella cf. novicida
Fx1]
Length = 201
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 107/198 (54%), Gaps = 6/198 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV+ + FY F+ +AIIS+ ++V NP+ SV ++IF F+ A ++++L ++A++ +V
Sbjct: 1 MVVTDILFYTFASLAIISALVLVLANNPVNSVIAMIFTFIFTAAVWIILQQVYLALLLIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++ MLD+ E + + G ++ + ++ +
Sbjct: 61 VYVGAVLVMFLFVVFMLDL---HVEEQGRVGRFFYALAAVVVCAIFATVISYAATNVFAG 117
Query: 121 LSRLVFKGNNVENIGKVLYTQ-YAYPLEISGFILLLSMIGAIVLMLR-HRRDIKRQDISK 178
+ + ++ IG +++ Y E+ FILL +M AI L LR R+ K + ++
Sbjct: 118 -AMMQGGVGGLKIIGLTMFSNANLYVFELVDFILLAAMTAAITLTLRAKRKGNKTVNPAQ 176
Query: 179 QLESNPDNSIVMVKVKSG 196
Q++ + + MVK+ S
Sbjct: 177 QVKVRAKDRLTMVKMPSN 194
>gi|283786348|ref|YP_003366213.1| NADH-quinone oxidoreductase chain J [Citrobacter rodentium ICC168]
gi|282949802|emb|CBG89425.1| NADH-quinone oxidoreductase chain J [Citrobacter rodentium ICC168]
Length = 184
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAVLSAIMLVVIVYAILGVNDQGIDG 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
V + + +G L+ Y +E++ +LL ++ A + R
Sbjct: 122 VP--ISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERPG 165
>gi|304398208|ref|ZP_07380082.1| NADH dehydrogenase (quinone) [Pantoea sp. aB]
gi|308187596|ref|YP_003931727.1| NADH dehydrogenase I chain J [Pantoea vagans C9-1]
gi|304354074|gb|EFM18447.1| NADH dehydrogenase (quinone) [Pantoea sp. aB]
gi|308058106|gb|ADO10278.1| NADH dehydrogenase I chain J [Pantoea vagans C9-1]
Length = 183
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + ++ AG+F +GA F + ++VY G
Sbjct: 2 EFAFYLCGLVAVLTTLRVITHTNPVHALLYLIVSLLSIAGVFFSMGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + ++ + + + L++ + + +
Sbjct: 62 AIMVLFVFVVMMLNLGKQTEKQEREWLSPSLWIGPGIVSLLLLVVMIYAIL--TANDQGI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R+
Sbjct: 120 DGTIIDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREERQG 165
>gi|156933130|ref|YP_001437046.1| NADH dehydrogenase subunit J [Cronobacter sakazakii ATCC BAA-894]
gi|156531384|gb|ABU76210.1| hypothetical protein ESA_00940 [Cronobacter sakazakii ATCC BAA-894]
Length = 187
Score = 97.4 bits (241), Expect = 9e-19, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + AG+F LGA F + ++VY G
Sbjct: 2 EFAFYICALVAVLTTARVITHSNPVHALLYLIISLLAIAGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGDSVVRQEREWLKPQIWIGPGILSAVLLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +GK L+ Y +E++ +LL ++ A L +
Sbjct: 120 EGNPISAKAVGKDLFQTYVLAVELASMLLLAGLVVAFHLGREEKAG 165
>gi|133900576|gb|ABO41454.1| NADH dehydrogenase subunit 6 [Tetrastigma obovatum]
gi|133900578|gb|ABO41455.1| NADH dehydrogenase subunit 6 [Tetrastigma rumicispermum]
gi|133900580|gb|ABO41456.1| NADH dehydrogenase subunit 6 [Tetrastigma voinierianum]
Length = 179
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPIPVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAETHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAEKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSPILLVAMIGAIVLTMHRTTKVKRQDVFRRNAID 176
>gi|15802827|ref|NP_288854.1| NADH dehydrogenase subunit J [Escherichia coli O157:H7 EDL933]
gi|15832418|ref|NP_311191.1| NADH dehydrogenase subunit J [Escherichia coli O157:H7 str. Sakai]
gi|16130215|ref|NP_416783.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli str. K-12 substr. MG1655]
gi|24113652|ref|NP_708162.1| NADH dehydrogenase subunit J [Shigella flexneri 2a str. 301]
gi|26248667|ref|NP_754707.1| NADH dehydrogenase subunit J [Escherichia coli CFT073]
gi|30063706|ref|NP_837877.1| NADH dehydrogenase subunit J [Shigella flexneri 2a str. 2457T]
gi|74312798|ref|YP_311217.1| NADH dehydrogenase subunit J [Shigella sonnei Ss046]
gi|82544758|ref|YP_408705.1| NADH dehydrogenase subunit J [Shigella boydii Sb227]
gi|82777688|ref|YP_404037.1| NADH dehydrogenase subunit J [Shigella dysenteriae Sd197]
gi|89109098|ref|AP_002878.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli str. K-12 substr. W3110]
gi|91211572|ref|YP_541558.1| NADH dehydrogenase subunit J [Escherichia coli UTI89]
gi|110642484|ref|YP_670214.1| NADH dehydrogenase subunit J [Escherichia coli 536]
gi|110806243|ref|YP_689763.1| NADH dehydrogenase subunit J [Shigella flexneri 5 str. 8401]
gi|117624469|ref|YP_853382.1| NADH dehydrogenase subunit J [Escherichia coli APEC O1]
gi|157157709|ref|YP_001463623.1| NADH dehydrogenase subunit J [Escherichia coli E24377A]
gi|157161768|ref|YP_001459086.1| NADH dehydrogenase subunit J [Escherichia coli HS]
gi|168748129|ref|ZP_02773151.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4113]
gi|168755032|ref|ZP_02780039.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4401]
gi|168761281|ref|ZP_02786288.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4501]
gi|168767906|ref|ZP_02792913.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4486]
gi|168772994|ref|ZP_02798001.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4196]
gi|168780135|ref|ZP_02805142.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4076]
gi|168787187|ref|ZP_02812194.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC869]
gi|168798450|ref|ZP_02823457.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC508]
gi|170019411|ref|YP_001724365.1| NADH dehydrogenase subunit J [Escherichia coli ATCC 8739]
gi|170081897|ref|YP_001731217.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli str. K-12 substr. DH10B]
gi|170681867|ref|YP_001744478.1| NADH dehydrogenase subunit J [Escherichia coli SMS-3-5]
gi|187731180|ref|YP_001881101.1| NADH dehydrogenase subunit J [Shigella boydii CDC 3083-94]
gi|188491681|ref|ZP_02998951.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli 53638]
gi|191166504|ref|ZP_03028334.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli B7A]
gi|191170098|ref|ZP_03031652.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli F11]
gi|193062313|ref|ZP_03043408.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli E22]
gi|193068217|ref|ZP_03049181.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli E110019]
gi|194427097|ref|ZP_03059648.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli B171]
gi|194433331|ref|ZP_03065611.1| NADH-quinone oxidoreductase, J subunit [Shigella dysenteriae 1012]
gi|194436249|ref|ZP_03068351.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli 101-1]
gi|195935657|ref|ZP_03081039.1| NADH dehydrogenase subunit J [Escherichia coli O157:H7 str. EC4024]
gi|208807034|ref|ZP_03249371.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4206]
gi|208812963|ref|ZP_03254292.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4045]
gi|208818254|ref|ZP_03258574.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4042]
gi|209397133|ref|YP_002271689.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4115]
gi|209919728|ref|YP_002293812.1| NADH dehydrogenase subunit J [Escherichia coli SE11]
gi|215487493|ref|YP_002329924.1| NADH dehydrogenase subunit J [Escherichia coli O127:H6 str.
E2348/69]
gi|217327964|ref|ZP_03444047.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. TW14588]
gi|218548271|ref|YP_002382062.1| NADH dehydrogenase subunit J [Escherichia fergusonii ATCC 35469]
gi|218554836|ref|YP_002387749.1| NADH dehydrogenase subunit J [Escherichia coli IAI1]
gi|218559193|ref|YP_002392106.1| NADH dehydrogenase subunit J [Escherichia coli S88]
gi|218690440|ref|YP_002398652.1| NADH dehydrogenase subunit J [Escherichia coli ED1a]
gi|218695879|ref|YP_002403546.1| NADH dehydrogenase subunit J [Escherichia coli 55989]
gi|218700754|ref|YP_002408383.1| NADH dehydrogenase subunit J [Escherichia coli IAI39]
gi|218705810|ref|YP_002413329.1| NADH dehydrogenase subunit J [Escherichia coli UMN026]
gi|227887336|ref|ZP_04005141.1| NADH dehydrogenase subunit J [Escherichia coli 83972]
gi|237704754|ref|ZP_04535235.1| NADH-quinone oxidoreductase [Escherichia sp. 3_2_53FAA]
gi|238901455|ref|YP_002927251.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli BW2952]
gi|253772798|ref|YP_003035629.1| NADH dehydrogenase subunit J [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254162289|ref|YP_003045397.1| NADH dehydrogenase subunit J [Escherichia coli B str. REL606]
gi|254794172|ref|YP_003079009.1| NADH dehydrogenase subunit J [Escherichia coli O157:H7 str.
TW14359]
gi|256017564|ref|ZP_05431429.1| NADH dehydrogenase subunit J [Shigella sp. D9]
gi|256022036|ref|ZP_05435901.1| NADH dehydrogenase subunit J [Escherichia sp. 4_1_40B]
gi|260844867|ref|YP_003222645.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli O103:H2 str. 12009]
gi|260856324|ref|YP_003230215.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli O26:H11 str. 11368]
gi|260869003|ref|YP_003235405.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli O111:H- str. 11128]
gi|261223266|ref|ZP_05937547.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli O157:H7 str. FRIK2000]
gi|261259184|ref|ZP_05951717.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli O157:H7 str. FRIK966]
gi|293405746|ref|ZP_06649738.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli FVEC1412]
gi|293410640|ref|ZP_06654216.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli B354]
gi|293446617|ref|ZP_06663039.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli B088]
gi|297518347|ref|ZP_06936733.1| NADH dehydrogenase subunit J [Escherichia coli OP50]
gi|298381429|ref|ZP_06991028.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli FVEC1302]
gi|300818120|ref|ZP_07098332.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 107-1]
gi|300822151|ref|ZP_07102293.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 119-7]
gi|300896954|ref|ZP_07115435.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 198-1]
gi|300903665|ref|ZP_07121581.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 84-1]
gi|300918555|ref|ZP_07135145.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 115-1]
gi|300924539|ref|ZP_07140503.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 182-1]
gi|300936844|ref|ZP_07151733.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 21-1]
gi|300948576|ref|ZP_07162669.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 116-1]
gi|300956460|ref|ZP_07168749.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 175-1]
gi|300981078|ref|ZP_07175350.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 200-1]
gi|300983375|ref|ZP_07176559.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 45-1]
gi|301024078|ref|ZP_07187792.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 69-1]
gi|301026950|ref|ZP_07190343.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 196-1]
gi|301049033|ref|ZP_07196018.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 185-1]
gi|301303261|ref|ZP_07209386.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 124-1]
gi|301328772|ref|ZP_07221820.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 78-1]
gi|301647623|ref|ZP_07247419.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 146-1]
gi|306814609|ref|ZP_07448771.1| NADH dehydrogenase subunit J [Escherichia coli NC101]
gi|307138944|ref|ZP_07498300.1| NADH dehydrogenase subunit J [Escherichia coli H736]
gi|307311160|ref|ZP_07590804.1| NADH dehydrogenase (quinone) [Escherichia coli W]
gi|309785016|ref|ZP_07679649.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella dysenteriae 1617]
gi|309793159|ref|ZP_07687587.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 145-7]
gi|312967578|ref|ZP_07781793.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli 2362-75]
gi|312973461|ref|ZP_07787633.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli 1827-70]
gi|331642918|ref|ZP_08344053.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli H736]
gi|331647935|ref|ZP_08349027.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli M605]
gi|331653722|ref|ZP_08354723.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli M718]
gi|331658360|ref|ZP_08359322.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli TA206]
gi|331663794|ref|ZP_08364704.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli TA143]
gi|331668978|ref|ZP_08369826.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli TA271]
gi|331673785|ref|ZP_08374548.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli TA280]
gi|331678226|ref|ZP_08378901.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli H591]
gi|331683952|ref|ZP_08384548.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli H299]
gi|332278574|ref|ZP_08390987.1| NADH:ubiquinone oxidoreductase membrane subunit J [Shigella sp. D9]
gi|84028757|sp|P0AFE2|NUOJ_ECO57 RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J; AltName: Full=NUO10
gi|84028758|sp|P0AFE1|NUOJ_ECOL6 RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J; AltName: Full=NUO10
gi|84028759|sp|P0AFE0|NUOJ_ECOLI RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J; AltName: Full=NUO10
gi|84028760|sp|P0AFE3|NUOJ_SHIFL RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|12516630|gb|AAG57409.1|AE005460_3 NADH dehydrogenase I chain J [Escherichia coli O157:H7 str. EDL933]
gi|26109072|gb|AAN81275.1|AE016763_234 NADH dehydrogenase I chain J [Escherichia coli CFT073]
gi|1788616|gb|AAC75340.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli str. K-12 substr. MG1655]
gi|1799640|dbj|BAA16108.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli str. K12 substr. W3110]
gi|13362634|dbj|BAB36587.1| NADH dehydrogenase I chain J [Escherichia coli O157:H7 str. Sakai]
gi|24052716|gb|AAN43869.1| NADH dehydrogenase I chain J [Shigella flexneri 2a str. 301]
gi|30041961|gb|AAP17687.1| NADH dehydrogenase I chain J [Shigella flexneri 2a str. 2457T]
gi|73856275|gb|AAZ88982.1| NADH dehydrogenase I chain J [Shigella sonnei Ss046]
gi|81241836|gb|ABB62546.1| NADH dehydrogenase I chain J [Shigella dysenteriae Sd197]
gi|81246169|gb|ABB66877.1| NADH dehydrogenase I chain J [Shigella boydii Sb227]
gi|91073146|gb|ABE08027.1| NADH dehydrogenase I chain J [Escherichia coli UTI89]
gi|110344076|gb|ABG70313.1| NADH dehydrogenase I chain J [Escherichia coli 536]
gi|110615791|gb|ABF04458.1| NADH dehydrogenase I chain J [Shigella flexneri 5 str. 8401]
gi|115513593|gb|ABJ01668.1| NADH dehydrogenase I chain J [Escherichia coli APEC O1]
gi|157067448|gb|ABV06703.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli HS]
gi|157079739|gb|ABV19447.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli E24377A]
gi|169754339|gb|ACA77038.1| NADH dehydrogenase (quinone) [Escherichia coli ATCC 8739]
gi|169889732|gb|ACB03439.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli str. K-12 substr. DH10B]
gi|170519585|gb|ACB17763.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli SMS-3-5]
gi|187428172|gb|ACD07446.1| NADH-quinone oxidoreductase, J subunit [Shigella boydii CDC
3083-94]
gi|187771333|gb|EDU35177.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4196]
gi|188017289|gb|EDU55411.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4113]
gi|188486880|gb|EDU61983.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli 53638]
gi|189002049|gb|EDU71035.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4076]
gi|189357621|gb|EDU76040.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4401]
gi|189363001|gb|EDU81420.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4486]
gi|189368227|gb|EDU86643.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4501]
gi|189372886|gb|EDU91302.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC869]
gi|189378912|gb|EDU97328.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC508]
gi|190903464|gb|EDV63183.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli B7A]
gi|190909614|gb|EDV69199.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli F11]
gi|192931979|gb|EDV84578.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli E22]
gi|192958496|gb|EDV88935.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli E110019]
gi|194414718|gb|EDX30989.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli B171]
gi|194418425|gb|EDX34514.1| NADH-quinone oxidoreductase, J subunit [Shigella dysenteriae 1012]
gi|194424977|gb|EDX40962.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli 101-1]
gi|208726835|gb|EDZ76436.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4206]
gi|208734240|gb|EDZ82927.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4045]
gi|208738377|gb|EDZ86059.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4042]
gi|209158533|gb|ACI35966.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. EC4115]
gi|209765148|gb|ACI80886.1| NADH dehydrogenase I chain J [Escherichia coli]
gi|209765150|gb|ACI80887.1| NADH dehydrogenase I chain J [Escherichia coli]
gi|209765152|gb|ACI80888.1| NADH dehydrogenase I chain J [Escherichia coli]
gi|209765156|gb|ACI80890.1| NADH dehydrogenase I chain J [Escherichia coli]
gi|209912987|dbj|BAG78061.1| NADH dehydrogenase I chain J [Escherichia coli SE11]
gi|215265565|emb|CAS09968.1| NADH: ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli O127:H6 str. E2348/69]
gi|217320331|gb|EEC28756.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli O157:H7
str. TW14588]
gi|218352611|emb|CAU98392.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli 55989]
gi|218355812|emb|CAQ88425.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
fergusonii ATCC 35469]
gi|218361604|emb|CAQ99196.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli IAI1]
gi|218365962|emb|CAR03706.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli S88]
gi|218370740|emb|CAR18553.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli IAI39]
gi|218428004|emb|CAR08775.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli ED1a]
gi|218432907|emb|CAR13801.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli UMN026]
gi|222034036|emb|CAP76777.1| NadH-quinone oxidoreductase subunit J [Escherichia coli LF82]
gi|226901120|gb|EEH87379.1| NADH-quinone oxidoreductase [Escherichia sp. 3_2_53FAA]
gi|227835686|gb|EEJ46152.1| NADH dehydrogenase subunit J [Escherichia coli 83972]
gi|238861875|gb|ACR63873.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli BW2952]
gi|242377913|emb|CAQ32682.1| NADH:ubiquinone oxidoreductase, membrane subunit J, subunit of
NADH:ubiquinone oxidoreductase I [Escherichia coli
BL21(DE3)]
gi|253323842|gb|ACT28444.1| NADH dehydrogenase (quinone) [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974190|gb|ACT39861.1| NADH dehydrogenase subunit J [Escherichia coli B str. REL606]
gi|253978357|gb|ACT44027.1| NADH dehydrogenase subunit J [Escherichia coli BL21(DE3)]
gi|254593572|gb|ACT72933.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli O157:H7 str. TW14359]
gi|257754973|dbj|BAI26475.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli O26:H11 str. 11368]
gi|257760014|dbj|BAI31511.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli O103:H2 str. 12009]
gi|257765359|dbj|BAI36854.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli O111:H- str. 11128]
gi|260448627|gb|ACX39049.1| NADH dehydrogenase (quinone) [Escherichia coli DH1]
gi|281179367|dbj|BAI55697.1| NADH dehydrogenase I chain J [Escherichia coli SE15]
gi|281601721|gb|ADA74705.1| NADH-quinone oxidoreductase subunit J [Shigella flexneri 2002017]
gi|284922268|emb|CBG35353.1| NADH-quinone oxidoreductase chain J [Escherichia coli 042]
gi|291323447|gb|EFE62875.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli B088]
gi|291427954|gb|EFF00981.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli FVEC1412]
gi|291471108|gb|EFF13592.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli B354]
gi|294489634|gb|ADE88390.1| NADH-quinone oxidoreductase, J subunit [Escherichia coli IHE3034]
gi|298278871|gb|EFI20385.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli FVEC1302]
gi|299879497|gb|EFI87708.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 196-1]
gi|300299142|gb|EFJ55527.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 185-1]
gi|300307691|gb|EFJ62211.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 200-1]
gi|300316730|gb|EFJ66514.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 175-1]
gi|300359222|gb|EFJ75092.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 198-1]
gi|300396734|gb|EFJ80272.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 69-1]
gi|300404321|gb|EFJ87859.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 84-1]
gi|300408541|gb|EFJ92079.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 45-1]
gi|300414290|gb|EFJ97600.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 115-1]
gi|300419257|gb|EFK02568.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 182-1]
gi|300451924|gb|EFK15544.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 116-1]
gi|300458031|gb|EFK21524.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 21-1]
gi|300525281|gb|EFK46350.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 119-7]
gi|300529264|gb|EFK50326.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 107-1]
gi|300841435|gb|EFK69195.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 124-1]
gi|300844834|gb|EFK72594.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 78-1]
gi|301074250|gb|EFK89056.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 146-1]
gi|305852003|gb|EFM52455.1| NADH dehydrogenase subunit J [Escherichia coli NC101]
gi|306908666|gb|EFN39163.1| NADH dehydrogenase (quinone) [Escherichia coli W]
gi|307554342|gb|ADN47117.1| NADH dehydrogenase I chain J [Escherichia coli ABU 83972]
gi|307626184|gb|ADN70488.1| NADH dehydrogenase subunit J [Escherichia coli UM146]
gi|308123445|gb|EFO60707.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 145-7]
gi|308927386|gb|EFP72860.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella dysenteriae 1617]
gi|309702592|emb|CBJ01920.1| NADH-quinone oxidoreductase chain J [Escherichia coli ETEC H10407]
gi|310332056|gb|EFP99291.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli 1827-70]
gi|312287775|gb|EFR15680.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli 2362-75]
gi|312946898|gb|ADR27725.1| NADH dehydrogenase subunit J [Escherichia coli O83:H1 str. NRG
857C]
gi|313651103|gb|EFS15502.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella flexneri 2a str. 2457T]
gi|315061572|gb|ADT75899.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Escherichia
coli W]
gi|315136914|dbj|BAJ44073.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli DH1]
gi|315255214|gb|EFU35182.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 85-1]
gi|315285920|gb|EFU45358.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 110-3]
gi|315292247|gb|EFU51599.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 153-1]
gi|315298121|gb|EFU57390.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 16-3]
gi|315615549|gb|EFU96181.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli 3431]
gi|320177162|gb|EFW52174.1| NADH-ubiquinone oxidoreductase chain J [Shigella dysenteriae CDC
74-1112]
gi|320183375|gb|EFW58227.1| NADH-ubiquinone oxidoreductase chain J [Shigella flexneri CDC
796-83]
gi|320192099|gb|EFW66744.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli O157:H7
str. EC1212]
gi|320199868|gb|EFW74457.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli EC4100B]
gi|320641107|gb|EFX10586.1| NADH:ubiquinone oxidoreductase subunit J [Escherichia coli O157:H7
str. G5101]
gi|320646495|gb|EFX15414.1| NADH:ubiquinone oxidoreductase subunit J [Escherichia coli O157:H-
str. 493-89]
gi|320651592|gb|EFX19972.1| NADH:ubiquinone oxidoreductase subunit J [Escherichia coli O157:H-
str. H 2687]
gi|320657344|gb|EFX25146.1| NADH:ubiquinone oxidoreductase subunit J [Escherichia coli O55:H7
str. 3256-97 TW 07815]
gi|320667864|gb|EFX34772.1| NADH:ubiquinone oxidoreductase subunit J [Escherichia coli O157:H7
str. LSU-61]
gi|323156430|gb|EFZ42585.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli EPECa14]
gi|323161614|gb|EFZ47499.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli E128010]
gi|323171961|gb|EFZ57605.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli LT-68]
gi|323176795|gb|EFZ62385.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli 1180]
gi|323184401|gb|EFZ69777.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli 1357]
gi|323187995|gb|EFZ73290.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli RN587/1]
gi|323377848|gb|ADX50116.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli KO11]
gi|323936570|gb|EGB32857.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli E1520]
gi|323941023|gb|EGB37210.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli E482]
gi|323944793|gb|EGB40859.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli H120]
gi|323956046|gb|EGB51799.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli H263]
gi|323961463|gb|EGB57073.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli H489]
gi|323967721|gb|EGB63133.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli M863]
gi|323973015|gb|EGB68209.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli TA007]
gi|323977519|gb|EGB72605.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli TW10509]
gi|324006670|gb|EGB75889.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 57-2]
gi|324013180|gb|EGB82399.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 60-1]
gi|324020876|gb|EGB90095.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 117-3]
gi|324112812|gb|EGC06788.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
fergusonii B253]
gi|324117842|gb|EGC11741.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli E1167]
gi|325496685|gb|EGC94544.1| NADH dehydrogenase subunit J [Escherichia fergusonii ECD227]
gi|326339631|gb|EGD63442.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli O157:H7
str. 1125]
gi|326344093|gb|EGD67854.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli O157:H7
str. 1044]
gi|327252550|gb|EGE64209.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Escherichia coli STEC_7v]
gi|330912105|gb|EGH40615.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli AA86]
gi|331039716|gb|EGI11936.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli H736]
gi|331043659|gb|EGI15797.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli M605]
gi|331048571|gb|EGI20647.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli M718]
gi|331056608|gb|EGI28617.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli TA206]
gi|331059593|gb|EGI31570.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli TA143]
gi|331064172|gb|EGI36083.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli TA271]
gi|331069058|gb|EGI40450.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli TA280]
gi|331074686|gb|EGI46006.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli H591]
gi|331078904|gb|EGI50106.1| NADH-quinone oxidoreductase subunit J (NADHdehydrogenase I subunit
J) (NDH-1 subunit J) (NUO10) [Escherichia coli H299]
gi|332088410|gb|EGI93528.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella boydii 5216-82]
gi|332090625|gb|EGI95721.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella dysenteriae 155-74]
gi|332093678|gb|EGI98736.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella boydii 3594-74]
gi|332100926|gb|EGJ04272.1| NADH:ubiquinone oxidoreductase membrane subunit J [Shigella sp. D9]
gi|332344061|gb|AEE57395.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Escherichia
coli UMNK88]
gi|332754928|gb|EGJ85293.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella flexneri 4343-70]
gi|332755329|gb|EGJ85693.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella flexneri K-671]
gi|332756223|gb|EGJ86574.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella flexneri 2747-71]
gi|333001424|gb|EGK20992.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella flexneri VA-6]
gi|333001957|gb|EGK21523.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella flexneri K-218]
gi|333002647|gb|EGK22207.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella flexneri K-272]
gi|333016220|gb|EGK35551.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella flexneri K-304]
gi|333016531|gb|EGK35861.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella flexneri K-227]
Length = 184
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|300864217|ref|ZP_07109101.1| NADH dehydrogenase subunit J [Oscillatoria sp. PCC 6506]
gi|300337791|emb|CBN54247.1| NADH dehydrogenase subunit J [Oscillatoria sp. PCC 6506]
Length = 209
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F L + M I ++ VV N +YS F L F++ AG++LLL A+FVA +++Y
Sbjct: 7 VQIVSFGLLAVMMIAAALGVVLFSNIVYSAFLLAGVFMSIAGIYLLLNADFVAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + + A + + + +
Sbjct: 67 VGAVNVLILFAIMLVNKREDF-RAISNAWVRKAATAVVCVALFALLGTMVLSTPWAISTA 125
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
L +++ IGK +T + P E++ LL++M+GAI+L R
Sbjct: 126 TLPAGESSIVVIGKHFFTDFLLPFELASVFLLMAMVGAIILARR 169
>gi|133900496|gb|ABO41414.1| NADH dehydrogenase subunit 6 [Maprounea guianensis]
Length = 179
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFXDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTGVKRQDIFRRNAIDF 177
>gi|257852746|gb|ACV71385.1| NADH dehydrogenase subunit 6 [Soyauxia floribunda]
Length = 178
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVFRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAID 176
>gi|133900426|gb|ABO41379.1| NADH dehydrogenase subunit 6 [Ctenolophon englerianus]
Length = 179
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900466|gb|ABO41399.1| NADH dehydrogenase subunit 6 [Homalanthus populneus]
Length = 179
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900380|gb|ABO41356.1| NADH dehydrogenase subunit 6 [Acridocarpus natalitius]
Length = 179
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+ +V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 ALMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|257852670|gb|ACV71347.1| NADH dehydrogenase subunit 6 [Lachnostylis bilocularis]
Length = 178
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFCDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTHRNTTSMRYTVYAVKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHKTKKVKRQDIFRRNAIDF 177
>gi|133900388|gb|ABO41360.1| NADH dehydrogenase subunit 6 [Austrobuxus megacarpus]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I R S IG++ + + V
Sbjct: 61 IKKAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|133900382|gb|ABO41357.1| NADH dehydrogenase subunit 6 [Androstachys johnsonii]
gi|133900434|gb|ABO41383.1| NADH dehydrogenase subunit 6 [Dissiliaria muelleri]
gi|133900506|gb|ABO41419.1| NADH dehydrogenase subunit 6 [Micrantheum hexandrum]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900402|gb|ABO41367.1| NADH dehydrogenase subunit 6 [Byrsonima crassifolia]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900390|gb|ABO41361.1| NADH dehydrogenase subunit 6 [Balanops vieillardii]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLEALGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|226355368|ref|YP_002785108.1| NADH dehydrogenase (quinone) subunit J [Deinococcus deserti VCD115]
gi|226317358|gb|ACO45354.1| putative NADH dehydrogenase (quinone), subunit J (NADH-quinone
oxidoreductase, subunit J) [Deinococcus deserti VCD115]
Length = 199
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
L F L +A++ + + RN +++ L+ + AGLF + A F+A I ++VY GA
Sbjct: 3 LAFILLGALALVGGVITIAARNAVHASLGLVGTLLCVAGLFATMNASFLAAIQVIVYAGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF-SAEGELSRL 124
++V FLF+IMML+ + V IG + F
Sbjct: 63 IMVLFLFVIMMLNANAPVTGRDPVPFVRELASIGGVLLAGAFVVLAFTYRDPRPLAEGAE 122
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+G +G+ L T++ P E +LL++++GA+ L+ R
Sbjct: 123 ALRGGGAGPVGETLLTRFLLPFEAVSILLLVAIVGAVALVQRPEPQT 169
>gi|133900512|gb|ABO41422.1| NADH dehydrogenase subunit 6 [Neoscortechinia kingii]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900392|gb|ABO41362.1| NADH dehydrogenase subunit 6 [Bergia texana]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900478|gb|ABO41405.1| NADH dehydrogenase subunit 6 [Irvingia malayana]
gi|133900482|gb|ABO41407.1| NADH dehydrogenase subunit 6 [Klainedoxa gabonensis]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900440|gb|ABO41386.1| NADH dehydrogenase subunit 6 [Elatine triandra]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900430|gb|ABO41381.1| NADH dehydrogenase subunit 6 [Dicella nucifera]
gi|133900494|gb|ABO41413.1| NADH dehydrogenase subunit 6 [Malpighia stevensii]
gi|133900560|gb|ABO41446.1| NADH dehydrogenase subunit 6 [Thryallis longifolia]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|11466584|ref|NP_066474.1| NADH dehydrogenase subunit 6 [Rhodomonas salina]
gi|10444171|gb|AAG17745.1|AF288090_21 NADH dehydrogenase subunit 6 [Rhodomonas salina]
Length = 207
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 78/207 (37%), Positives = 110/207 (53%), Gaps = 12/207 (5%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M FYLFS + + +F V+ RNPI+S+ L+F F NAA L +LLGA+F+A++ L+
Sbjct: 1 MCFNIQLFYLFSSLICVCAFSVIFSRNPIHSILFLVFLFFNAAALLILLGADFLAILFLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF----- 115
VYVGAV V FLF++MML + + G L I E+ + + F
Sbjct: 61 VYVGAVAVLFLFVVMMLSGKLIKTKINFFYGPLVILLAFIFLCEIFLIIEQNLNFLSSNI 120
Query: 116 -------SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ ++ +NVE IG VLYT + Y + ILL++MIGAIVL L R
Sbjct: 121 YFLNDILNPLFIWKDKIYCLSNVEIIGSVLYTYFFYFFIVGSLILLVAMIGAIVLTLYKR 180
Query: 169 RDIKRQDISKQLESNPDNSIVMVKVKS 195
D+K Q I KQ + N + SI + K S
Sbjct: 181 NDLKTQFIFKQAKKNFEASIQLTKNDS 207
>gi|257852692|gb|ACV71358.1| NADH dehydrogenase subunit 6 [Trigoniastrum hypoleucum]
Length = 178
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +K+QDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKKQDIFRRNAIDF 177
>gi|133900504|gb|ABO41418.1| NADH dehydrogenase subunit 6 [Mesua sp. Coode 7884]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTAYLKYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|323952073|gb|EGB47947.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli H252]
Length = 184
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGGFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|397907|emb|CAA48369.1| NADH dehydrogenase I, subunit nuoJ [Escherichia coli]
Length = 184
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E + + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQETQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISRKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|133900492|gb|ABO41412.1| NADH dehydrogenase subunit 6 [Malesherbia linearifolia]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNESIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTQVKRQDIFRRNAIDF 177
>gi|133900524|gb|ABO41428.1| NADH dehydrogenase subunit 6 [Petalostigma pubescens]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTQVKRQDIFRRNAIDF 177
>gi|133900386|gb|ABO41359.1| NADH dehydrogenase subunit 6 [Atuna racemosa]
gi|133900418|gb|ABO41375.1| NADH dehydrogenase subunit 6 [Chrysobalanus icaco]
gi|133900464|gb|ABO41398.1| NADH dehydrogenase subunit 6 [Hirtella bicornis]
Length = 179
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|291283521|ref|YP_003500339.1| NADH-quinone oxidoreductase subunit J [Escherichia coli O55:H7 str.
CB9615]
gi|209765154|gb|ACI80889.1| NADH dehydrogenase I chain J [Escherichia coli]
gi|290763394|gb|ADD57355.1| NADH-quinone oxidoreductase subunit J [Escherichia coli O55:H7 str.
CB9615]
gi|320663046|gb|EFX30363.1| NADH:ubiquinone oxidoreductase subunit J [Escherichia coli O55:H7
str. USDA 5905]
Length = 184
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|133900424|gb|ABO41378.1| NADH dehydrogenase subunit 6 [Croton alabamensis var. alabamensis]
Length = 179
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDEETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTQVKRQDIFRRNAIDF 177
>gi|157144789|ref|YP_001452108.1| NADH dehydrogenase subunit J [Citrobacter koseri ATCC BAA-895]
gi|157081994|gb|ABV11672.1| hypothetical protein CKO_00516 [Citrobacter koseri ATCC BAA-895]
Length = 184
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGISLFGPYVLAVELASMLLLAGLVVAFHVGREERVG 165
>gi|254445138|ref|ZP_05058614.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Verrucomicrobiae bacterium DG1235]
gi|198259446|gb|EDY83754.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Verrucomicrobiae bacterium DG1235]
Length = 167
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 61/168 (36%), Positives = 95/168 (56%), Gaps = 1/168 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M LFFY+F+ + + +F VV RNP+ + LI F+ A LF++L A F+A+I ++VY
Sbjct: 1 MTDLFFYIFAAITLACAFAVVFSRNPVNAAMFLILTFLGMASLFVMLEAYFLAVIQVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV+V FLFIIM+LD+ ++ + K L + IG + V +
Sbjct: 61 AGAVVVLFLFIIMLLDVKE-ESKAKLKPLTLVASVIGFAILLVGVVGITSSDNIKATTET 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G ++N G L+T Y P++++GF+LL++MIG IVL R + D
Sbjct: 120 LPEAAGATLKNFGYELFTTYQLPMQVTGFLLLVAMIGVIVLSKRVKTD 167
>gi|133900566|gb|ABO41449.1| NADH dehydrogenase subunit 6 [Turnera ulmifolia]
Length = 178
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFFAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNESIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQ+I ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTQVKRQNIFRRNALDF 177
>gi|167549681|ref|ZP_02343440.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|198244071|ref|YP_002216390.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|238912401|ref|ZP_04656238.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|197938587|gb|ACH75920.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|205325286|gb|EDZ13125.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|326624141|gb|EGE30486.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
Length = 184
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ L+ + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAVLSAIMLAVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|133900416|gb|ABO41374.1| NADH dehydrogenase subunit 6 [Cespedesia spathulata]
Length = 179
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV LI F + +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFLILVFRDTSGLLLFLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYMVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900516|gb|ABO41424.1| NADH dehydrogenase subunit 6 [Ostodes paniculata]
Length = 179
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHKTTRVKRQDVFRRNAIDF 177
>gi|257852580|gb|ACV71302.1| NADH dehydrogenase subunit 6 [Bhesa robusta]
Length = 178
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++M+GAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMMGAIVLTMHRTTKVKRQDIFRRNAMDF 177
>gi|326772142|ref|ZP_08231427.1| NADH dehydrogenase I, J subunit [Actinomyces viscosus C505]
gi|326638275|gb|EGE39176.1| NADH dehydrogenase I, J subunit [Actinomyces viscosus C505]
Length = 328
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 71/169 (42%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F + + + + V+T + + + ++I ++ A L+++ + F+ + +VVY
Sbjct: 22 EAIVFGVVALVTVACGIGVLTAKRAVNAAINMIGIMISLAVLYIVNESPFMGITQVVVYT 81
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV+ LF+IM++ + + I + + +
Sbjct: 82 GAVMTLVLFVIMLVGVGGDEPVGAAGTVMRRPVLILLGLGLAGALTAVVWRSTLPKPAGL 141
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + LY + +E++ +L+++ +GA+ L R R +
Sbjct: 142 KDGAKAAPDLLAVTLYHDHVVTMELTAILLIVAAVGALTLTHRQRIRAR 190
>gi|257852740|gb|ACV71382.1| NADH dehydrogenase subunit 6 [Vitis aestivalis]
Length = 178
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPIPVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAETHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRKTTSLRYTVYAEKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSPILLVAMIGAIVLTMHRTTKVKRQDVFRRNAID 176
>gi|133900520|gb|ABO41426.1| NADH dehydrogenase subunit 6 [Passiflora coccinea]
Length = 179
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNESIPLLPTQRKTTSLRYTVYAGSVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQ+I ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTQVKRQNIFRRNAIDF 177
>gi|56707220|ref|YP_169116.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89257081|ref|YP_514443.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
holarctica LVS]
gi|110669690|ref|YP_666247.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
tularensis FSC198]
gi|115315438|ref|YP_764161.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
holarctica OSU18]
gi|134301255|ref|YP_001121223.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
tularensis WY96-3418]
gi|156503295|ref|YP_001429360.1| NADH dehydrogenase I, subunit J [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167009473|ref|ZP_02274404.1| NADH dehydrogenase i, j subunit [Francisella tularensis subsp.
holarctica FSC200]
gi|187930997|ref|YP_001890981.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224456281|ref|ZP_03664754.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254368317|ref|ZP_04984335.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
holarctica 257]
gi|254368974|ref|ZP_04984987.1| hypothetical protein FTAG_00804 [Francisella tularensis subsp.
holarctica FSC022]
gi|254371436|ref|ZP_04987437.1| NADH dehydrogenase [Francisella tularensis subsp. tularensis
FSC033]
gi|254874058|ref|ZP_05246768.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
MA00-2987]
gi|290952998|ref|ZP_06557619.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
holarctica URFT1]
gi|295313818|ref|ZP_06804391.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
holarctica URFT1]
gi|56603712|emb|CAG44673.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89144912|emb|CAJ80260.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
holarctica LVS]
gi|110320023|emb|CAL08056.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
tularensis FSC198]
gi|115130337|gb|ABI83524.1| NADH dehydrogenase (ubiquinone) [Francisella tularensis subsp.
holarctica OSU18]
gi|134049032|gb|ABO46103.1| NADH dehydrogenase I subunit J [Francisella tularensis subsp.
tularensis WY96-3418]
gi|134254125|gb|EBA53219.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
holarctica 257]
gi|151569675|gb|EDN35329.1| NADH dehydrogenase [Francisella tularensis subsp. tularensis
FSC033]
gi|156253898|gb|ABU62404.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157121895|gb|EDO66065.1| hypothetical protein FTAG_00804 [Francisella tularensis subsp.
holarctica FSC022]
gi|187711906|gb|ACD30203.1| NADH dehydrogenase I, J subunit [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254840057|gb|EET18493.1| NADH dehydrogenase I [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158328|gb|ADA77719.1| NADH dehydrogenase i, j subunit [Francisella tularensis subsp.
tularensis NE061598]
Length = 201
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 6/198 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV+ + FY F+ +AII + ++V NP+ SV ++IF F+ A ++++L ++A++ +V
Sbjct: 1 MVVTDILFYTFASLAIIFALVLVLANNPVNSVIAMIFTFIFTAAVWIILQQVYLALLLIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++ MLD+ +E + + + + I +
Sbjct: 61 VYVGAVLVMFLFVVFMLDLHVEEQGRVGRFF----YALAAVVVCAIFATVISYAATNVFA 116
Query: 121 LSRLVFKGNNVENIGKVLYTQ-YAYPLEISGFILLLSMIGAIVLMLR-HRRDIKRQDISK 178
+ + ++ IG +++ Y E+ FILL +M AI L LR R+ K D ++
Sbjct: 117 GAMMQGGVGGLKIIGLTMFSNANLYVFELVDFILLAAMTAAITLTLRAKRKGNKTVDPAQ 176
Query: 179 QLESNPDNSIVMVKVKSG 196
Q++ + + MVK+ S
Sbjct: 177 QVKVRAKDRLTMVKMPSN 194
>gi|133900442|gb|ABO41387.1| NADH dehydrogenase subunit 6 [Endospermum moluccanum]
Length = 179
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTASLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|257852674|gb|ACV71349.1| NADH dehydrogenase subunit 6 [Tetracoccus dioicus]
Length = 178
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|227497689|ref|ZP_03927898.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
gi|226832866|gb|EEH65249.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
Length = 286
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 73/171 (42%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F + + + ++ ++T + + + ++I + A L++ A F+ + +VV
Sbjct: 20 TGETILFAVVALVTVVCGIGLLTAKRAVSAAVNMIAIMIALAVLYIANEAPFLGITQIVV 79
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ LF++M++ + + ++ A
Sbjct: 80 YTGAVMTLVLFVVMLVGVGGDEPVGSAGSPATKWIIALFGLGLAVLVAGVVWRTQFPDAA 139
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+G ++ +L+ Q+ +E++G +L+++ GA+ L R R K
Sbjct: 140 GLDQGQGAAPADLATLLFGQHVVAMELTGLLLIVAATGALTLTHRQRIRAK 190
>gi|257852714|gb|ACV71369.1| NADH dehydrogenase subunit 6 [Plagiopteron suaveolens]
Length = 178
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDISGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I + R S IG++ + + + V
Sbjct: 61 IQISEIQEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRYTTSLRYTVYAGKVGS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYVVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 177
>gi|133900568|gb|ABO41450.1| NADH dehydrogenase subunit 6 [Vantanea guianensis]
Length = 178
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|260598697|ref|YP_003211268.1| NADH:ubiquinone oxidoreductase subunit J [Cronobacter turicensis
z3032]
gi|260217874|emb|CBA32418.1| NADH-quinone oxidoreductase subunit J [Cronobacter turicensis
z3032]
Length = 187
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + AG+F LGA F + ++VY G
Sbjct: 2 EFAFYICALVAVLTTARVITHSNPVHALLYLIISLLAIAGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGDSVVRQEREWLKPQIWIGPGILSAVLLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A L +
Sbjct: 120 EGNPISAKAVGTDLFKTYVLAVELASMLLLAGLVVAFHLGREEKAG 165
>gi|300931367|ref|ZP_07146698.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 187-1]
gi|300460829|gb|EFK24322.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Escherichia
coli MS 187-1]
Length = 184
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPIIAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|225848114|ref|YP_002728277.1| NADH-quinone oxidoreductase subunit j [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225643991|gb|ACN99041.1| NADH-quinone oxidoreductase subunit j (nadhdehydrogenase i subunit
j) (ndh-1 subunit j) [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 177
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 86/166 (51%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S +A++S+ VV RN +YSV SLI A + +GLF LGAE + + ++
Sbjct: 1 MELSVVAFWVLSTIAVLSAIGVVFFRNIVYSVLSLISALIAISGLFFNLGAELIGALQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y A++VF++ +I + A K F + V +
Sbjct: 61 IYAVAIVVFYVLVISTVPQYKGEAVDPKYALLSAPFGFILFLELAYVSVYGLWASNTGIF 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ + +N + + +L+T+Y +P E++ ILL++MIGAI+L +
Sbjct: 121 SPDIFNQISNAKAVATLLFTKYLFPFEVASLILLVAMIGAILLGRK 166
>gi|188996810|ref|YP_001931061.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931877|gb|ACD66507.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 176
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 86/166 (51%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ F++ S +A+IS+ VV RN +Y+V SLI + +GLF LGAE V + ++
Sbjct: 1 MELSAVAFWVLSTIAVISAIGVVFFRNIVYAVLSLISTLIAISGLFFNLGAELVGALQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y A++VF++ +I + A K F + V +
Sbjct: 61 IYAVAIVVFYVLVISTVPQYKGQAIDPKYTLLSLPFGFILFLELAYVSIYGLWASNKGIF 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ K +N + + +L+T+Y +P E++ ILL++MIGAI+L +
Sbjct: 121 SPDIFTKISNAKAVASLLFTKYLFPFEVASLILLVAMIGAILLGRK 166
>gi|133900574|gb|ABO41453.1| NADH dehydrogenase subunit 6 [Leea guineensis]
Length = 179
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVSRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAETHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRKTTSLRYTVYAEKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSPILLVAMIGAIVLTMHRTTQVKRQDIFRRNAIDF 177
>gi|257852608|gb|ACV71316.1| NADH dehydrogenase subunit 6 [Hevea sp. Gillespie 4272]
gi|257852610|gb|ACV71317.1| NADH dehydrogenase subunit 6 [Hura crepitans]
gi|257852614|gb|ACV71319.1| NADH dehydrogenase subunit 6 [Manihot grahamii]
Length = 178
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|16761245|ref|NP_456862.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16765647|ref|NP_461262.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29141059|ref|NP_804401.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56412783|ref|YP_149858.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62180890|ref|YP_217307.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161502535|ref|YP_001569647.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|161612952|ref|YP_001586917.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167994668|ref|ZP_02575759.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168229689|ref|ZP_02654747.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168237337|ref|ZP_02662395.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168242438|ref|ZP_02667370.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168261664|ref|ZP_02683637.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168465977|ref|ZP_02699847.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168817950|ref|ZP_02829950.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194445907|ref|YP_002041580.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194451507|ref|YP_002046373.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194470957|ref|ZP_03076941.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194738076|ref|YP_002115389.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248229|ref|YP_002147278.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197262113|ref|ZP_03162187.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197361717|ref|YP_002141353.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|200387795|ref|ZP_03214407.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204929159|ref|ZP_03220302.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205353435|ref|YP_002227236.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207857738|ref|YP_002244389.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213052936|ref|ZP_03345814.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213419032|ref|ZP_03352098.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213427018|ref|ZP_03359768.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213580775|ref|ZP_03362601.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213612296|ref|ZP_03370122.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213645877|ref|ZP_03375930.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865414|ref|ZP_03387533.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224583194|ref|YP_002636992.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|289829691|ref|ZP_06547232.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25285204|pir||AF0796 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16420861|gb|AAL21221.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|16503544|emb|CAD07552.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29136685|gb|AAO68250.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56127040|gb|AAV76546.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62128523|gb|AAX66226.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|160863882|gb|ABX20505.1| hypothetical protein SARI_00579 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|161362316|gb|ABX66084.1| hypothetical protein SPAB_00658 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404570|gb|ACF64792.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194409811|gb|ACF70030.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194457321|gb|EDX46160.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194713578|gb|ACF92799.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195631291|gb|EDX49851.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197093193|emb|CAR58637.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197211932|gb|ACH49329.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197240368|gb|EDY22988.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197289699|gb|EDY29062.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|199604893|gb|EDZ03438.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204321703|gb|EDZ06902.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205273216|emb|CAR38179.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205327485|gb|EDZ14249.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205335895|gb|EDZ22659.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205338451|gb|EDZ25215.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205345142|gb|EDZ31906.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205349398|gb|EDZ36029.1| NADH-quinone oxidoreductase, J subunit [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206709541|emb|CAR33886.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224467721|gb|ACN45551.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247526|emb|CBG25353.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267994415|gb|ACY89300.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158878|emb|CBW18391.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312913311|dbj|BAJ37285.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320086754|emb|CBY96526.1| NADH dehydrogenase I chain J [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321222978|gb|EFX48049.1| NADH-ubiquinone oxidoreductase chain J [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322617066|gb|EFY13972.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617628|gb|EFY14527.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322624742|gb|EFY21571.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322630291|gb|EFY27061.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322634472|gb|EFY31205.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322639182|gb|EFY35874.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640045|gb|EFY36712.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645734|gb|EFY42258.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322651509|gb|EFY47884.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322656069|gb|EFY52368.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659422|gb|EFY55669.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665882|gb|EFY62065.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669878|gb|EFY66019.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322673864|gb|EFY69961.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322678622|gb|EFY74678.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683582|gb|EFY79596.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322687658|gb|EFY83628.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322715369|gb|EFZ06940.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323130651|gb|ADX18081.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323193508|gb|EFZ78713.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323198413|gb|EFZ83515.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323201927|gb|EFZ86989.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323208535|gb|EFZ93474.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323209756|gb|EFZ94680.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323218292|gb|EGA03002.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222950|gb|EGA07299.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323227386|gb|EGA11551.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323232287|gb|EGA16390.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235679|gb|EGA19763.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323241160|gb|EGA25196.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244902|gb|EGA28904.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323250021|gb|EGA33915.1| NADH:ubiquinone oxidoreductase subunit J [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2009159199]
gi|323251633|gb|EGA35501.1| NADH:ubiquinone oxidoreductase subunit J [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008282]
gi|323254944|gb|EGA38735.1| NADH:ubiquinone oxidoreductase subunit J [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008283]
gi|323268100|gb|EGA51577.1| NADH:ubiquinone oxidoreductase subunit J [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008285]
gi|323270807|gb|EGA54245.1| NADH:ubiquinone oxidoreductase subunit J [Salmonella enterica
subsp. enterica serovar Montevideo str. IA_2010008287]
gi|326628527|gb|EGE34870.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332989253|gb|AEF08236.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 184
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ L+ + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAVLSAIMLAVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|297616448|ref|YP_003701607.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Syntrophothermus lipocalidus DSM 12680]
gi|297144285|gb|ADI01042.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Syntrophothermus lipocalidus DSM 12680]
Length = 166
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++ FY+ + + + + VV N + + F L+ +F+ A L+ LLGA+F+ ++ ++
Sbjct: 1 MTWEAVTFYILAVVTVTGAAGVVFSSNIVRAAFFLVASFLGVAALYFLLGADFLGLVQIM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GAV V +F +M++ D R S + G A L+ A V+
Sbjct: 61 IYAGAVSVLVIFAVMLVIKDDI---RRTSLFHPVSRWWGAAIAVLLTTALGKAVWQTSFP 117
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
L + + V + K+L Y E++ +LL++++GAI+L
Sbjct: 118 AKGLAVETDRVGQMAKLLLGDYVVAFEVAAVLLLVAIVGAIILAK 162
>gi|163744628|ref|ZP_02151988.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Oceanibulbus
indolifex HEL-45]
gi|161381446|gb|EDQ05855.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Oceanibulbus
indolifex HEL-45]
Length = 279
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY+ S +AI S + V V + I + F+L+ +F+ + LL+ A+++ + T+ +
Sbjct: 1 MTDIAFYILSAIAIWSGWRVFRVDSMIRATFALMVSFICVGAIALLMSADYIGVATVFMM 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
++V LF++M + + + + S GI+A V + + +
Sbjct: 61 AVEMMVMGLFMVMFMMNPAGLNPMQMVHQYRLSIGAGIVA----FIGLTVAVLATDLPHN 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
L + + ++G L E +G LL +M+GA++L R R
Sbjct: 117 PLPAGRDTMRDLGINLLGSSMLIFETAGVTLLATMLGAVILSSRRGR 163
>gi|133900488|gb|ABO41410.1| NADH dehydrogenase subunit 6 [Linum arboreum]
gi|133900544|gb|ABO41438.1| NADH dehydrogenase subunit 6 [Reinwardtia indica]
Length = 179
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|292488835|ref|YP_003531722.1| NADH dehydrogenase I subunit J [Erwinia amylovora CFBP1430]
gi|292899986|ref|YP_003539355.1| NADH dehydrogenase I chain J [Erwinia amylovora ATCC 49946]
gi|291199834|emb|CBJ46958.1| NADH dehydrogenase I chain J [Erwinia amylovora ATCC 49946]
gi|291554269|emb|CBA21583.1| NADH dehydrogenase I chain J [Erwinia amylovora CFBP1430]
Length = 184
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYLCGLVAVLATLRVITHTNPVHALLYLIISLLAVSGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + K G + L + L++ + + S + +
Sbjct: 62 AIMVLFVFVVMMLNLGGAEVQQEKDWLKPGMWIGPGLLSLLLLVTLVYAILSVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTMIDGKQVGISLFGPYVLAVELASMLLLAGLVVAFHIGREQRAG 165
>gi|300717643|ref|YP_003742446.1| NADH dehydrogenase I chain J [Erwinia billingiae Eb661]
gi|299063479|emb|CAX60599.1| NADH dehydrogenase I chain J [Erwinia billingiae Eb661]
Length = 184
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + + AG+F LGA F + ++VY G
Sbjct: 2 EFAFYLCGLVAVLTTLRVITHTNPVHALLYLIISLLAVAGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V ++ + + + +++ + + +
Sbjct: 62 AIMVLFVFVVMMLNLGESVQAQEREWLKPTVWIGPGVLSLVLLGVMIYAI--RSVNDQGI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R+
Sbjct: 120 DGTMIDAKAVGISLFGPYVLAVELASMLLLAGLVVAYHIGREQRQG 165
>gi|133900468|gb|ABO41400.1| NADH dehydrogenase subunit 6 [Hugonia platysepala]
Length = 179
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|320178747|gb|EFW53710.1| NADH-ubiquinone oxidoreductase chain J [Shigella boydii ATCC 9905]
Length = 184
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGITLFGPYVLVVELASMLLLAGLVVAFHVGREERAG 165
>gi|293415573|ref|ZP_06658216.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli B185]
gi|291433221|gb|EFF06200.1| NADH-ubiquinone oxidoreductase chain J [Escherichia coli B185]
Length = 184
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|312172995|emb|CBX81250.1| NADH dehydrogenase I chain J [Erwinia amylovora ATCC BAA-2158]
Length = 184
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYLCGLVAVLATLRVITHTNPVHALLYLIISLLAVSGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + K G + L + L++ + + S + +
Sbjct: 62 AIMVLFVFVVMMLNLGGAEVQQEKDWLKPGMWIGPGLLSLLLLVTLVYAILSVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTMIDGKQVGISLFGPYLLAVELASMLLLAGLVVAFHIGREQRAG 165
>gi|197120278|ref|YP_002140705.1| NADH dehydrogenase I subunit J [Geobacter bemidjiensis Bem]
gi|197089638|gb|ACH40909.1| NADH dehydrogenase I, J subunit [Geobacter bemidjiensis Bem]
Length = 167
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+S+FF + + +A+ISS LVVT +NPI S SL+ F A +++L A F+A ++VY
Sbjct: 1 MESIFFLVVATVAVISSILVVTCKNPINSALSLVMTFFCLATFYVMLDAPFMAATQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS-FFIGILAAELIVCASNFMVFSAEGEL 121
GA++V +F+IM+L++ E + F GS + L + + M +
Sbjct: 61 AGAIMVLIIFVIMLLNVKAESGKRGSHAVFAGSVLGLFALFQTVWFLSKGSMTGATGTMD 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +VE IGK L+T + P EI+ +LL +++GA++L +
Sbjct: 121 KAQIISVGHVELIGKALFTDFLLPFEITSVLLLAAIVGAVILAKKK 166
>gi|133900472|gb|ABO41402.1| NADH dehydrogenase subunit 6 [Hybanthus concolor]
Length = 179
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFCNISGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|225850950|ref|YP_002731184.1| NADH-quinone oxidoreductase subunit j (nadhdehydrogenase i subunit
j) (ndh-1 subunit j) [Persephonella marina EX-H1]
gi|225645392|gb|ACO03578.1| NADH-quinone oxidoreductase subunit j (nadhdehydrogenase i subunit
j) (ndh-1 subunit j) [Persephonella marina EX-H1]
Length = 176
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 86/166 (51%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++ FY FS +AI+S+ VV +N IY+V SLI + +GLF +GAE + + ++
Sbjct: 1 MELNTVAFYTFSTLAILSAVGVVFFKNIIYAVLSLISTLIMVSGLFFTMGAELIGGLQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y A++VF++ +I + + K I V +
Sbjct: 61 IYAVAIVVFYVLVISTVPEFKGRSVDPKYMLTSIPVGFLIFIELAYVSLYGAWEANKGIF 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+V + NV+ + +L+T+Y +P E++ ILL++MIGAI++ +
Sbjct: 121 TPEVVNEVGNVKAVATMLFTKYLFPFEVASLILLVAMIGAILIGRK 166
>gi|133900432|gb|ABO41382.1| NADH dehydrogenase subunit 6 [Dichapetalum macrocarpum]
Length = 179
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNALDF 177
>gi|257852584|gb|ACV71304.1| NADH dehydrogenase subunit 6 [Licania michauxii]
Length = 178
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900422|gb|ABO41377.1| NADH dehydrogenase subunit 6 [Clutia myricoides]
gi|133900470|gb|ABO41401.1| NADH dehydrogenase subunit 6 [Humiria balsamifera]
Length = 179
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|56791564|gb|AAW30320.1| NADH dehydrogenase subunit 6 [Berberis bealei]
Length = 179
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
S A++S +V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V F
Sbjct: 1 LSSPALVSGLMVARAKNPVHSVSFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSF 60
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEG 119
LF++MM I I R S IG++ +
Sbjct: 61 LFVVMMFHIQIAETHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTHRNTTSLRYT 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ + N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ +
Sbjct: 121 VHAGKIRSWTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFR 179
>gi|133900490|gb|ABO41411.1| NADH dehydrogenase subunit 6 [Lunania parviflora]
Length = 179
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+ +VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 ALMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRKTASLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|150375781|ref|YP_001312377.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
medicae WSM419]
gi|150030328|gb|ABR62444.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
medicae WSM419]
Length = 166
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FF LF+ ++++++ +V RNP++S +L+ F+ + +F++LGA +A+I + VY
Sbjct: 1 MHQGFFLLFATVSVVTALTLVLARNPVHSALALMACFLQISAIFVMLGAPLLAVIQIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF+IMM+D+ V + G L + + +L +V + E
Sbjct: 61 VGAIMVLFLFVIMMVDVREAVLQRFMPGGNLPALALLLLLGTEMVVLVLWSDRFIESP-P 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
G+ + ++ K L++ Y P EI+ ILL +++GAIVL +
Sbjct: 120 VAERGGDAIRDLSKTLFSDYLLPFEIASVILLAALVGAIVLARKE 164
>gi|329296026|ref|ZP_08253362.1| NADH:ubiquinone oxidoreductase subunit J [Plautia stali symbiont]
Length = 183
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + ++ AG+F +GA F + ++VY G
Sbjct: 2 EFAFYLCGLVAVLTTLRVITHTNPVHALLYLIVSLLSIAGVFFSMGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + ++ + + + L++ + + +
Sbjct: 62 AIMVLFVFVVMMLNLGKTQQDQEREWLKPSLWIGPGIVSLLLLVVMIYAI--MTATDQGI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R+
Sbjct: 120 DGTVIDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREDRQG 165
>gi|257852650|gb|ACV71337.1| NADH dehydrogenase subunit 6 [Lophopyxis maingayi]
Length = 178
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRETSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQRKTTSLRYMVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTKRVKRQDIFRRNAIDF 177
>gi|257852616|gb|ACV71320.1| NADH dehydrogenase subunit 6 [Moultonianthus leembruggianus]
Length = 178
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNALDF 177
>gi|257852734|gb|ACV71379.1| NADH dehydrogenase subunit 6 [Heterostemon otophorus]
Length = 178
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIYEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSIILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 177
>gi|257852662|gb|ACV71343.1| NADH dehydrogenase subunit 6 [Paropsia madagascariensis]
Length = 178
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNESIPLLPTQRKTTSLRYTVYAGSVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQ+I ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTQVKRQNIFRRNAIDF 177
>gi|307131806|ref|YP_003883822.1| NADH:ubiquinone oxidoreductase membrane subunit J [Dickeya dadantii
3937]
gi|306529335|gb|ADM99265.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Dickeya
dadantii 3937]
Length = 183
Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 5/184 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + +A++++ V+T NP++++ LI + + AG+F LGA F + ++VY G
Sbjct: 2 EFAFYATAIIAVLATLRVITHTNPVHALLYLIVSLLAVAGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E K + + + +++ + S G+ +
Sbjct: 62 AIMVLFVFVVMMLNLGNSVDEQEKLWLKPSVWVGPGVLSLILLAIIVKGILSVTGQ--NI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD---IKRQDISKQLE 181
+ + +G L+ Y +E++ +LL ++ A + +R K QD K+
Sbjct: 120 AGNIVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREDKRGELIAKDQDADKKTT 179
Query: 182 SNPD 185
Sbjct: 180 EERA 183
>gi|133900508|gb|ABO41420.1| NADH dehydrogenase subunit 6 [Microdesmis puberula]
Length = 179
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTSQVKRQDVFRRNAIDF 177
>gi|257852624|gb|ACV71324.1| NADH dehydrogenase subunit 6 [Suregada glomerulata]
Length = 178
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GVMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|259907935|ref|YP_002648291.1| NADH dehydrogenase subunit J [Erwinia pyrifoliae Ep1/96]
gi|224963557|emb|CAX55047.1| NADH dehydrogenase I chain J [Erwinia pyrifoliae Ep1/96]
gi|283477816|emb|CAY73732.1| NADH dehydrogenase I chain J [Erwinia pyrifoliae DSM 12163]
Length = 184
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYLCGLVAVLATLRVITHTNPVHALLYLIISLLAVSGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + K G + L + L++ + + S + +
Sbjct: 62 AIMVLFVFVVMMLNLGGAEVQQEKDWLKPGMWIGPGLLSLLLLVTIVYAILSVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTMIDGKQVGISLFGPYVLAVELASMLLLAGLVVAFHIGREQRGG 165
>gi|133900476|gb|ABO41404.1| NADH dehydrogenase subunit 6 [Hypericum empetrifolium]
Length = 179
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASN-----------FMVFSAEGELSRLVFK 127
I I R S IG++ + + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQKNTAYLKYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
++E +G +LYT Y + ILL++MIGAIVL + + +KRQDI ++ +
Sbjct: 121 WTSLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTKQVKRQDIFRRNSIDF 177
>gi|56791572|gb|AAW30324.1| NADH dehydrogenase subunit 6 [Piper betle]
Length = 177
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 59/177 (33%), Positives = 90/177 (50%), Gaps = 11/177 (6%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
S A++S +VV +NP++SV I F + +GL LLLG +F AMI+ VV++GA+ V F
Sbjct: 1 LSSPALVSGLMVVRAKNPVHSVSFPILVFCDTSGLLLLLGLDFSAMISPVVHIGAIAVSF 60
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEG 119
LF++MM +I I R S IG++ + +
Sbjct: 61 LFVVMMFNIQIAETHEEVLRYLPVSGIIGLIFWWEMFFIFDNETIPLLPTHRKTTSLRYT 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ V N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+
Sbjct: 121 VYAGKVRSWTNLETLGNLLYTYYSVRFLVPSLILLVAMIGAIVLTMHRTSKVKRQDV 177
>gi|257852748|gb|ACV71386.1| NADH dehydrogenase subunit 6 [Daphniphyllum macropodum]
Length = 178
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVSFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAETHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYKVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAID 176
>gi|257852694|gb|ACV71359.1| NADH dehydrogenase subunit 6 [Tricliceras longipedunculatum]
Length = 178
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNESIPLLPTQRKTTSLGYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQ+I ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTQVKRQNIFRRNAIDF 177
>gi|257852644|gb|ACV71334.1| NADH dehydrogenase subunit 6 [Lacistema aggregatum]
Length = 178
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL LLLG +F AMI+ VV++GA+ V FLF++MM +
Sbjct: 1 GLMVVRAKNPVHSVSFPIPVFRDTSGLLLLLGLDFSAMISPVVHIGAIAVSFLFVVMMFN 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTHRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAID 176
>gi|115531585|ref|YP_783947.1| NADH dehydrogenase subunit 6 [Aurelia aurita]
gi|110226012|gb|ABG56244.1| NADH dehydrogenase subunit 6 [Aurelia aurita]
Length = 190
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+F + IIS +VVT +P++S+ L+ +F+ AA +F+ L A+F+A+ TL++YVGA+ +
Sbjct: 5 IFMILTIISGIMVVTAIHPVHSIIWLVLSFIGAAIVFIQLQADFIALATLIIYVGAIAIL 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F+F++MML++ + IL ++ + + L+ +
Sbjct: 65 FIFVLMMLNLSSFEFDGNISSIIPLGI-TSILGLITLIIGLEYSNINDPEVEEILIKELL 123
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDN 186
+++ IG LY YA L ++ ILL++MIGAI+L L+ KRQD Q+ + N
Sbjct: 124 DIQTIGFQLYNSYAPHLIVASLILLVAMIGAIILTLQPHLAAKRQDNFIQITRDFHN 180
>gi|209522710|ref|ZP_03271268.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Arthrospira
maxima CS-328]
gi|209496759|gb|EDZ97056.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Arthrospira
maxima CS-328]
Length = 208
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 2/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F L + M I S+ VV ++N +YS F L F++ AGL+LLL A+FVA +++Y
Sbjct: 9 VQVVSFGLLTIMMIGSALGVVLLKNIVYSAFLLGGVFMSMAGLYLLLNADFVAAAQVLIY 68
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VG+V V LF IM+++ + L ++ L S ++ + +
Sbjct: 69 VGSVNVLILFGIMLVNKQQDF--RVLPNAGLRQIATAVVCVGLFALLSTMVLSTPWSVTT 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+V ++ IG+ +T + P E++ LL++M+GAIVL R
Sbjct: 127 TVVTIESSAIAIGEHFFTDFLLPFELASVFLLMAMVGAIVLARR 170
>gi|170767399|ref|ZP_02901852.1| NADH-quinone oxidoreductase, J subunit [Escherichia albertii
TW07627]
gi|170123733|gb|EDS92664.1| NADH-quinone oxidoreductase, J subunit [Escherichia albertii
TW07627]
Length = 184
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A +
Sbjct: 120 DGTPVSAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREEHAG 165
>gi|186685675|ref|YP_001868871.1| NADH dehydrogenase subunit J [Nostoc punctiforme PCC 73102]
gi|186468127|gb|ACC83928.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Nostoc
punctiforme PCC 73102]
Length = 204
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/196 (22%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + + M I ++ VV + +YS F L F++ AG++LLL +FVA +++Y
Sbjct: 7 VQLISLGILGVMMIGAAIGVVLFSSIVYSAFMLGGVFISMAGIYLLLNGDFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + + + ++ + +
Sbjct: 67 VGAVNVLILFAIMLVNKRQDFV-AFPNSWVRKLLTGLVSVGLFGLLSTMVLATPWAYSTT 125
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH--RRDIKRQDISKQL 180
+V +++ IG+ +T + P E++ +LL++M+GAI+L R + R ++ + +
Sbjct: 126 PVVGGESSIVVIGEHFFTDFLLPFELASILLLIAMVGAIILARREYLPDQLTRSNVGQTV 185
Query: 181 ESNPDNSIVMVKVKSG 196
+ + +V S
Sbjct: 186 LTLQERPRELVSTTSE 201
>gi|271501260|ref|YP_003334285.1| NADH dehydrogenase (quinone) [Dickeya dadantii Ech586]
gi|270344815|gb|ACZ77580.1| NADH dehydrogenase (quinone) [Dickeya dadantii Ech586]
Length = 183
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + +A++++ V+T NP++++ LI + + AG+F LGA F + ++VY G
Sbjct: 2 EFAFYATAIIAVLATLRVITHTNPVHALLYLIISLLAVAGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E K + + +++ + +
Sbjct: 62 AIMVLFVFVVMMLNLGNSVDEQEKLWLKPAVWIGPGALSLILLAVIVKGI--TSITDQNI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD---IKRQDISKQLE 181
V + + +G L+ Y +E++ +LL ++ A + +R K QD K++
Sbjct: 120 VGNMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREDKRGDLVAKDQDADKKIT 179
Query: 182 SNPD 185
Sbjct: 180 EERA 183
>gi|257852728|gb|ACV71376.1| NADH dehydrogenase subunit 6 [Guaiacum sanctum]
Length = 178
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNALDF 177
>gi|326572765|gb|EGE22751.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis BC7]
Length = 210
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY+ S +AI +S VVT N ++++ S+I + + AG+F +LGA F ++ ++VY GA++
Sbjct: 17 FYVLSLVAIWASLRVVTHANAVHAILSMIVSLLAVAGIFFILGAPFAGILEIIVYAGAIL 76
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F+F+IMML++ + E + L + F+ + + + +L
Sbjct: 77 VLFVFVIMMLNLGTDTTEEKTWLTANAWAMPVCLMMIVGAVLIGFIGYGTDQSI-QLQSD 135
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +++G L+T Y +E++ F+LL +++ A L +
Sbjct: 136 TISAKDVGIRLFTGYVLLVEVAAFLLLGALVAAYHLGKK 174
>gi|257852676|gb|ACV71350.1| NADH dehydrogenase subunit 6 [Froesia diffusa]
Length = 178
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 11/178 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRETSGLLLFLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPD 185
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDFK 178
>gi|133900558|gb|ABO41445.1| NADH dehydrogenase subunit 6 [Tapura guianensis]
Length = 179
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDLFRRNAIDF 177
>gi|219848529|ref|YP_002462962.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Chloroflexus aggregans DSM 9485]
gi|219542788|gb|ACL24526.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chloroflexus
aggregans DSM 9485]
Length = 217
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 2/165 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + + ++++ +VV+VRN I+S LI F L++LL AEF+A++ ++VYVG
Sbjct: 6 QIVFGIIALFILVAAVMVVSVRNVIHSALWLIACFFGVGALYMLLQAEFLAVVQVLVYVG 65
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV V LF IM+ + + I +L ++ + L
Sbjct: 66 AVSVLILFAIMLTRQISGEGVRQLTTRWPIVLAISVLLFATVMAPTLINQQWNVPPAPPL 125
Query: 125 --VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+G+ ++ ++ G +L +++IGAIV+
Sbjct: 126 GTPEPIAGPAELGRGFVNEFLLQFQVVGVLLTVALIGAIVIAFEE 170
>gi|310768157|gb|ADP13107.1| NADH dehydrogenase subunit J [Erwinia sp. Ejp617]
Length = 184
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYLCGLVAVLATLRVITHTNPVHALLYLIISLLAVSGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + K G + L + L++ + + S + +
Sbjct: 62 AIMVLFVFVVMMLNLGGAEVQQEKDWLKPGMWIGPGLLSLLLLVTIVYAILSVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTMIDGKQVGISLFGPYVLAVELASMLLLAGLVVAFHIGREQRAG 165
>gi|56791560|gb|AAW30318.1| NADH dehydrogenase subunit 6 [Laurus nobilis]
Length = 182
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/182 (31%), Positives = 90/182 (49%), Gaps = 11/182 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++ V I F + +GL LLLG +F AMI+ VV++GA+
Sbjct: 1 VLSSPALVSGLMVVRAKNPVHPVSFPIPVFRDTSGLLLLLGLDFSAMISPVVHIGAIAAS 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM +I I R S IG++ +
Sbjct: 61 FLFVVMMFNIQIAETHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTHRNTTSLRY 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ +
Sbjct: 121 TVHAGKVRSWTNLETLGNLLYTYYSVRFLVPSPILLVAMIGAIVLTMHRTTKVKRQDVFR 180
Query: 179 QL 180
+
Sbjct: 181 RN 182
>gi|257852648|gb|ACV71336.1| NADH dehydrogenase subunit 6 [Durandea pentagyna]
Length = 178
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900384|gb|ABO41358.1| NADH dehydrogenase subunit 6 [Archytaea triflora]
Length = 179
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTAYLKYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|296112940|ref|YP_003626878.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis RH4]
gi|295920634|gb|ADG60985.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis RH4]
gi|326561164|gb|EGE11529.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis 7169]
gi|326562848|gb|EGE13136.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis
103P14B1]
gi|326567648|gb|EGE17756.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis
12P80B1]
gi|326574015|gb|EGE23964.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis CO72]
gi|326577017|gb|EGE26912.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis
101P30B1]
Length = 210
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY+ S +AI +S VVT N ++++ S+I + + AG+F +LGA F ++ ++VY GA++
Sbjct: 17 FYVLSLVAIWASLRVVTHANAVHAILSMIVSLLAVAGIFFILGAPFAGILEIIVYAGAIL 76
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F+F+IMML++ + E + L + F+ + + + +L
Sbjct: 77 VLFVFVIMMLNLGTDTTEEKTWLTANAWAMPVCLMMIVGAVLIGFIGYGTDQSI-QLQSD 135
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +++G L+T Y +E++ F+LL +++ A L +
Sbjct: 136 TISAKDVGVRLFTGYVLLVEVAAFLLLGALVAAYHLGKK 174
>gi|257852638|gb|ACV71331.1| NADH dehydrogenase subunit 6 [Cyrillopsis paraensis]
Length = 178
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y +S ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLSSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900540|gb|ABO41436.1| NADH dehydrogenase subunit 6 [Quiina pteridophylla]
Length = 179
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRETSGLLLFLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|257852612|gb|ACV71318.1| NADH dehydrogenase subunit 6 [Lasiocroton bahamensis]
gi|257852622|gb|ACV71323.1| NADH dehydrogenase subunit 6 [Spathiostemon javensis]
Length = 178
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDLFRRNAIDF 177
>gi|257852642|gb|ACV71333.1| NADH dehydrogenase subunit 6 [Ochthocosmus longipedicellatus]
Length = 178
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 11/176 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAID 176
>gi|257852630|gb|ACV71327.1| NADH dehydrogenase subunit 6 [Sacoglottis gabonensis]
Length = 178
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|257852658|gb|ACV71341.1| NADH dehydrogenase subunit 6 [Medusagyne oppositifolia]
Length = 178
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRDTSGLLLFLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|326561575|gb|EGE11916.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis
46P47B1]
gi|326567947|gb|EGE18044.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis BC1]
Length = 210
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY+ S +AI +S VVT N ++++ S+I + + AG+F +LGA F ++ ++VY GA++
Sbjct: 17 FYVLSLVAIWASLRVVTHANAVHAILSMIVSLLAVAGIFFILGAPFAGILEIIVYAGAIL 76
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F+F+IMML++ + E + L + F+ + + + +L
Sbjct: 77 VLFVFVIMMLNLGTDTTEEKTWLTANAWAMPVCLMMIVGAVLIGFIGYGTDQSI-QLQSD 135
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +++G L+T Y +E++ F+LL +++ A L +
Sbjct: 136 TISAKDVGVRLFTGYVLLVEVAAFLLLGALVAAYHLGKK 174
>gi|257852730|gb|ACV71377.1| NADH dehydrogenase subunit 6 [Krameria lanceolata]
Length = 178
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTXVKRQDVFRRNALDF 177
>gi|257852738|gb|ACV71381.1| NADH dehydrogenase subunit 6 [Fagus grandifolia]
Length = 178
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 11/178 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPD 185
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDFK 178
>gi|133900532|gb|ABO41432.1| NADH dehydrogenase subunit 6 [Pogonophora schomburgkiana]
Length = 179
Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQRKTTPLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDLFRRNAIDF 177
>gi|133900398|gb|ABO41365.1| NADH dehydrogenase subunit 6 [Brexia madagascariensis]
gi|133900438|gb|ABO41385.1| NADH dehydrogenase subunit 6 [Elaeodendron orientale]
gi|133900500|gb|ABO41416.1| NADH dehydrogenase subunit 6 [Gymnosporia arbutifolia]
gi|133900502|gb|ABO41417.1| NADH dehydrogenase subunit 6 [Gymnosporia senegalensis]
Length = 179
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDISGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 177
>gi|133900412|gb|ABO41372.1| NADH dehydrogenase subunit 6 [Casearia sylvestris]
Length = 179
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+ +VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 ALMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFIFDNESIPLLPTQRKTTSLRYTVYAVKVRN 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|257852632|gb|ACV71328.1| NADH dehydrogenase subunit 6 [Cratoxylum formosum]
Length = 178
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQKKTAYLKYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNNIDF 177
>gi|257852704|gb|ACV71364.1| NADH dehydrogenase subunit 6 [Cephalotus follicularis]
gi|257852706|gb|ACV71365.1| NADH dehydrogenase subunit 6 [Rourea minor]
gi|257852710|gb|ACV71367.1| NADH dehydrogenase subunit 6 [Crinodendron hookerianum]
gi|257852712|gb|ACV71368.1| NADH dehydrogenase subunit 6 [Sloanea berteroana]
gi|257853521|gb|ACV71763.1| NADH dehydrogenase subunit 6 [Averrhoa carambola]
Length = 178
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFFAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 177
>gi|188533355|ref|YP_001907152.1| NADH dehydrogenase subunit J [Erwinia tasmaniensis Et1/99]
gi|188028397|emb|CAO96258.1| NADH dehydrogenase I chain J [Erwinia tasmaniensis Et1/99]
Length = 183
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL +A++++ V+T NP++++ LI + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYLCGLVAVLATLRVITHTNPVHALLYLIISLLAVSGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + K G + L + L++ + + S + +
Sbjct: 62 AIMVLFVFVVMMLNLGGAEVQQEKDWLKPGMWIGPGLLSLLLLVTLVYAILSVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTMIDGKQVGISLFGPYVLAVELASMLLLAGLVVAFHVGREQRAG 165
>gi|107736213|ref|YP_626509.1| NADH dehydrogenase subunit 6 [Briareum asbestinum]
gi|100913613|gb|ABF69700.1| NADH dehydrogenase subunit 6 [Briareum asbestinum]
Length = 185
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/187 (29%), Positives = 93/187 (49%), Gaps = 17/187 (9%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IM++ +V + I + S + + ++
Sbjct: 64 AILFLFVIMLIQQPNKVDSQDHSHFLPVGLSV-------IFLFYGLLTNSPKYISNPVIG 116
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK----------RQDI 176
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 117 SKTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAQQPNTPSLYNSHGVPSRSRQDL 176
Query: 177 SKQLESN 183
Q+
Sbjct: 177 FLQISRE 183
>gi|133900394|gb|ABO41363.1| NADH dehydrogenase subunit 6 [Bernardia incana]
Length = 179
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G ++YT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLIYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTRVKRQDLFRRNAIDF 177
>gi|257852598|gb|ACV71311.1| NADH dehydrogenase subunit 6 [Acalypha californica]
Length = 178
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y +S ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDLFRRNAIDF 177
>gi|163784656|ref|ZP_02179484.1| NADH dehydrogenase I chain J [Hydrogenivirga sp. 128-5-R1-1]
gi|159880074|gb|EDP73750.1| NADH dehydrogenase I chain J [Hydrogenivirga sp. 128-5-R1-1]
Length = 174
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 87/170 (51%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++FS +A++S+ + RN +Y+V SLI + +GLF +GAE V I L+
Sbjct: 1 MELTQIAFWIFSSLAVLSAIGTIFFRNMVYTVLSLISTLIMVSGLFFTMGAELVGAIQLL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y A++VF++ +I + A K I V +
Sbjct: 61 IYAVAIVVFYVLVISTVPEFKGKAVDPKYMLLSIPVGFLIFLELAYVSIYGAWKSNTGIF 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ ++ K N + +G +L+T+Y +P E++ ILL++MIGAI++ + +
Sbjct: 121 STEVIDKIGNAKAVGTMLFTKYLFPFEVASLILLVAMIGAIIIGRKEEKQ 170
>gi|257852636|gb|ACV71330.1| NADH dehydrogenase subunit 6 [Triadenum walteri]
Length = 178
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASN-----------FMVFSAEGELSRLVFK 127
I I R S IG++ + + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQKNTAYLKYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
++E +G +LYT Y + ILL++MIGAIVL + + +KRQDI ++ +
Sbjct: 121 WTSLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTKQVKRQDIFRRNSIDF 177
>gi|116624762|ref|YP_826918.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Candidatus
Solibacter usitatus Ellin6076]
gi|116227924|gb|ABJ86633.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Candidatus
Solibacter usitatus Ellin6076]
Length = 169
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/168 (28%), Positives = 95/168 (56%), Gaps = 1/168 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ ++ FY+F+ M + L +T R+ ++S SLI + + AGL+LL AEF+ + +V
Sbjct: 1 MLTDTILFYIFAVMVLAGGILTITRRSAVHSAISLIVSLLGVAGLYLLQQAEFLFAVQIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS-FFIGILAAELIVCASNFMVFSAEG 119
+YVG ++V FLF+IM++++D E + R + + + ++ A++
Sbjct: 61 LYVGGIMVLFLFVIMLVNLDQAAKERQFNRQWSIALIAVALVGAQVGYFLYKGKGSFRIA 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
E+ +NVE + L+T+Y P EI+ +LL++++G++V+ +
Sbjct: 121 EVIAPAAVTHNVEQVADSLFTEYLLPFEIASILLLVAVVGSVVMAKKR 168
>gi|326577457|gb|EGE27341.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis O35E]
Length = 210
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY+ S +AI +S VVT N ++++ S+I + + AG+F +LGA F ++ ++VY GA++
Sbjct: 17 FYVLSLVAIWASLRVVTHANAVHAILSMIVSLLAVAGIFFILGAPFAGILEIIVYAGAIL 76
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F+F+IMML++ + E + L + F+ + + + +L
Sbjct: 77 VLFVFVIMMLNLGTDTTEEKTWLTANAWAMPVCLMMIVGAMLIGFIGYGTDQSI-QLQSD 135
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +++G L+T Y +E++ F+LL +++ A L +
Sbjct: 136 TISAKDVGVRLFTGYVLLVEVAAFLLLGALVAAYHLGKK 174
>gi|257852602|gb|ACV71313.1| NADH dehydrogenase subunit 6 [Conceveiba martiana]
Length = 178
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDLFRRNAMDF 177
>gi|56791582|gb|AAW30329.1| NADH dehydrogenase subunit 6 [Lonicera sp. Bergthorsson 0301]
Length = 178
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S +VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V
Sbjct: 1 VLSSLALVSGLMVVRAKNPVHSVSFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVS 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 61 FLFVVMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRY 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ V N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+
Sbjct: 121 MVYAGKVRSWTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDV 178
>gi|133900486|gb|ABO41409.1| NADH dehydrogenase subunit 6 [Leonia glycycarpa]
gi|133900546|gb|ABO41439.1| NADH dehydrogenase subunit 6 [Rinorea pubiflora]
Length = 179
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|253702586|ref|YP_003023775.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
M21]
gi|251777436|gb|ACT20017.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
M21]
Length = 167
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 91/166 (54%), Gaps = 1/166 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+S+FF + + +A+ISS LVVT +NPI S SL+ F A +++L A F+A ++VY
Sbjct: 1 MESIFFLVVAAVAVISSILVVTCKNPINSALSLVMTFFCLATFYVMLDAPFMAATQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS-FFIGILAAELIVCASNFMVFSAEGEL 121
GA++V +F+IM+L++ E + GS + L + + M +
Sbjct: 61 AGAIMVLIIFVIMLLNVKAESGKRGSHAVIAGSVLGLFALFQTVWFISKGSMTGATGTMD 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +VE IGK L+T + P EI+ +LL +++GA++L +
Sbjct: 121 KAQIVSVGHVELIGKALFTDFLLPFEITSVLLLAAIVGAVILAKKK 166
>gi|257852582|gb|ACV71303.1| NADH dehydrogenase subunit 6 [Centroplacus glaucinus]
Length = 178
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAMDF 177
>gi|322421841|ref|YP_004201064.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
M18]
gi|320128228|gb|ADW15788.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
M18]
Length = 167
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 91/166 (54%), Gaps = 1/166 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+S+FF + + +AIISS LVVT +NPI S SL+ F A +++L A F+A ++VY
Sbjct: 1 MESIFFLVVAAVAIISSILVVTCKNPINSALSLVMTFFCLATFYVMLDAPFMAATQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG-SFFIGILAAELIVCASNFMVFSAEGEL 121
GA++V +F+IM+L++ +E + G + + IL + M
Sbjct: 61 AGAIMVLIIFVIMLLNVRVETVKRGTHAVLAGSALGLFILFQTIWFLMKGSMTGQVGDMT 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +VE IGK L+T + P EI+ +LL +++GA++L +
Sbjct: 121 KEQIVSVGHVELIGKALFTDFLLPFEITSVLLLAAIVGAVILAKKK 166
>gi|1352591|sp|P48925|NU6M_CYACA RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|758173|emb|CAA88767.1| NADH dehydrogenase subunit 6 [Cyanidium caldarium]
Length = 201
Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 114/198 (57%), Gaps = 7/198 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ + FY FS ++++S+ +V++V+NP++SV LI F N GL LLLGAEF++++ L+V
Sbjct: 1 MIKLVLFYFFSGLSLVSASIVISVKNPVFSVVFLILVFFNVVGLLLLLGAEFLSLLFLIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN-------FMV 114
YVGA+ V FLF++M+L++ I + I N
Sbjct: 61 YVGAIAVLFLFVVMILNLKFIELRSSFFYYAFFGSLIMAIFLFEIFIILNSDLTFASSYF 120
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + ++ N++ +G VLYT Y+Y +SGF+LL++++GAI+L L R I+RQ
Sbjct: 121 LERKRIWVQELYSYTNLQILGNVLYTSYSYLFILSGFVLLVAILGAIILTLYQRSQIRRQ 180
Query: 175 DISKQLESNPDNSIVMVK 192
D + Q+ N D++I K
Sbjct: 181 DPNVQVVRNFDDTIRFFK 198
>gi|221633758|ref|YP_002522984.1| NADH dehydrogenase i subunit j [Thermomicrobium roseum DSM 5159]
gi|221155857|gb|ACM04984.1| nadh dehydrogenase i chain j [Thermomicrobium roseum DSM 5159]
Length = 241
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ F L + ++++ + VV RNP++S L+ +F+N A ++L+ AEF+A++ ++
Sbjct: 1 MSLEVAVFSLLALVSVLGALGVVLARNPVHSAIGLVLSFLNVAAIYLVARAEFLAVVQVI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG----ILAAELIVCASNFMVFS 116
VY GA+IV +F+ M++ D ++ L + + + V A
Sbjct: 61 VYAGAIIVLVVFVTMLVHPDDLPEFHGRRPLRLVTGLVLGAALLAEVAAAVLARGVRGAP 120
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
+ G N +G+VLY Y ++
Sbjct: 121 GPWTDEAVAAVGGNTRALGQVLYVDYMLGIQ 151
>gi|193782685|ref|NP_436087.2| NuoJ2 NADH:quinone oxidoreductase subunit 6 (chain J)
[Sinorhizobium meliloti 1021]
gi|307304387|ref|ZP_07584138.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
meliloti BL225C]
gi|10945071|emb|CAC14146.1| putative NADH-ubiquinone oxidoreductase subunit [Sinorhizobium
meliloti]
gi|193073141|gb|AAK65499.2| NuoJ2 NADH:quinone oxidoreductase subunit 6 (chain J)
[Sinorhizobium meliloti 1021]
gi|306902589|gb|EFN33183.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
meliloti BL225C]
Length = 166
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FF LF+ ++++++ +V RNP++S +L+ F+ + +F++LGA +A+I + VY
Sbjct: 1 MHQGFFLLFATVSVVTALTLVLARNPVHSALALMACFLQISAIFVMLGAPLLAVIQIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF+IMM+D+ V + G L + + +L +V + E
Sbjct: 61 VGAIMVLFLFVIMMVDVREAVLQRFMPGGNLPALALLVLLGAEMVVLVLWSDRFIESP-P 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
G+ + ++ K L++ Y P E++ ILL +++GAIVL +
Sbjct: 120 VAERGGDAIRDLSKTLFSDYLLPFEVASVILLAALVGAIVLARKE 164
>gi|239828577|ref|YP_002951201.1| NADH dehydrogenase subunit J [Geobacillus sp. WCH70]
gi|239808870|gb|ACS25935.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
sp. WCH70]
Length = 173
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + L F + + +AII L++ + ++ V +L+F F++ AGL++LL AEFVA + ++
Sbjct: 1 MSGEYLAFLVLALVAIIGGVLMLNLTKVVHMVIALVFTFISIAGLYVLLSAEFVAAVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + LF IM+ E E GF F I + A ++ +
Sbjct: 61 IYSGAITIIMLFGIMLTRHREEEKEETTTGGFWRKTFTAIAVSA-FGIAVYLGIYQLDFG 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
NN E IG LY+ Y P EI+ ILL++++GAI+L ++ + +
Sbjct: 120 EEAANLHENNTEQIGLALYSHYIIPFEITSIILLVALVGAIILAKKNDKGAPK 172
>gi|257852698|gb|ACV71361.1| NADH dehydrogenase subunit 6 [Hymenanthera alpina]
Length = 178
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVPFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|326569472|gb|EGE19532.1| NADH-quinone oxidoreductase subunit J [Moraxella catarrhalis BC8]
Length = 210
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY+ S +AI +S VVT N ++++ S+I + + AG+F +LGA F ++ ++VY GA++
Sbjct: 17 FYVLSLVAIWASLRVVTHANAVHAILSMIVSLLAVAGIFFILGAPFAGILEIIVYAGAIL 76
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F+F+IMML++ + E + L + F+ + + + +L
Sbjct: 77 VLFVFVIMMLNLGTDTTEEKTWLTANAWAMPVCLMMIVGAVLIGFIGYGTDQSI-QLQSD 135
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +++G L+T Y +E++ F+LL +++ A L +
Sbjct: 136 TISAKDVGIRLFTGYVLLVEVAAFLLLGALVAAYHLGKK 174
>gi|190893206|ref|YP_001979748.1| NADH-ubiquinone oxidoreductase, chain J [Rhizobium etli CIAT 652]
gi|190698485|gb|ACE92570.1| probable NADH-ubiquinone oxidoreductase protein, chain J [Rhizobium
etli CIAT 652]
Length = 166
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FF LFS +++I++ VV RNP++S +L+ F+N + +F+LL A F+A+I + VY
Sbjct: 1 MDQGFFLLFSAVSVITALTVVLARNPVHSALALMACFLNISAIFVLLEAPFLAVIQIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF+IMM+D+ V + G L + + +L ++ +
Sbjct: 61 VGAIMVLFLFVIMMIDVREAVLQRFLPGGNLPALVLVVLLGVEMLVLVLW-SDRFSVIEP 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ G+ + + L+ Y P EI+ ILL +++GAIVL + +
Sbjct: 120 VAMRGGDQIRQLSTTLFADYLLPFEIASVILLAALVGAIVLARKEQE 166
>gi|133900570|gb|ABO41451.1| NADH dehydrogenase subunit 6 [Vismia sp. Miller et al. 9313]
Length = 179
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI LVV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFLVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQKKTAYLKYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|257852678|gb|ACV71351.1| NADH dehydrogenase subunit 6 [Touroulia guianensis]
Length = 178
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRETSGLLLFLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|320353967|ref|YP_004195306.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfobulbus
propionicus DSM 2032]
gi|320122469|gb|ADW18015.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfobulbus
propionicus DSM 2032]
Length = 187
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 88/167 (52%), Gaps = 1/167 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ FF + M I S L +++RN ++SV ++ F + AGL+L L AEF+A + ++V
Sbjct: 1 MFLQFFFGYCALMIIASGILAISLRNLVHSVLMVLVLFFHMAGLYLTLNAEFLAAVQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA++V +LF++ ++ + E+ G I + A ++ +G
Sbjct: 61 YAGAILVLYLFVLFLVSLREELHLDAFVPGAWLGRIIAVGLAVGLLYVIPAFTLGEKGTW 120
Query: 122 SRLVF-KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S + + + +G+ LY+ Y P EI+G ILL+++IG +VL R
Sbjct: 121 SVSAIRELTHTKALGQELYSAYLLPFEIAGLILLVALIGGLVLARRE 167
>gi|251789022|ref|YP_003003743.1| NADH dehydrogenase (quinone) [Dickeya zeae Ech1591]
gi|247537643|gb|ACT06264.1| NADH dehydrogenase (quinone) [Dickeya zeae Ech1591]
Length = 183
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 89/184 (48%), Gaps = 5/184 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + +A++++ V+T NP++++ LI + + AG+F LGA F + ++VY G
Sbjct: 2 EFAFYATAIIAVLATLRVITHTNPVHALLYLIVSLLAVAGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E K + + + +++ + S + +
Sbjct: 62 AIMVLFVFVVMMLNLGNSVDEQEKLWLKPTVWLGPGVLSLVLLAIIVKGIISVTDQ--NI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD---IKRQDISKQLE 181
+ + +G L+ Y +E++ +LL ++ A + +R K QD K++
Sbjct: 120 AGNMIDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREDKRGELIAKDQDADKKIT 179
Query: 182 SNPD 185
Sbjct: 180 EERA 183
>gi|257852708|gb|ACV71366.1| NADH dehydrogenase subunit 6 [Eucryphia milliganii]
Length = 178
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPIPVFRETSGLLLLLGLDFFAMIFPVVYIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 177
>gi|133900514|gb|ABO41423.1| NADH dehydrogenase subunit 6 [Ochna multiflora]
Length = 179
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRDISGLLLFLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYMVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900458|gb|ABO41395.1| NADH dehydrogenase subunit 6 [Garcinia hessii]
Length = 179
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRKTAYLKYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y +S ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLSSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900414|gb|ABO41373.1| NADH dehydrogenase subunit 6 [Celastrus orbiculatus]
Length = 179
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SVF I F++ +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVFFPILVFLDISGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLGYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 177
>gi|218463312|ref|ZP_03503403.1| probable NADH-ubiquinone oxidoreductase protein, chain J [Rhizobium
etli Kim 5]
Length = 166
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FF LF+ ++++++ VV RNP++S +L+ F+N + +F+LL A F+A+I + VY
Sbjct: 1 MDQGFFLLFATVSVVTALTVVLARNPVHSALALMACFLNISAIFVLLEAPFLAVIQIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF+IMM+D+ V + G L + + ++ ++ +
Sbjct: 61 VGAIMVLFLFVIMMIDVREAVLQRFLPGGNLLALVLVVVLGLEMLVLVLW-SDRFSVIEP 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ G+ + + L+ Y P EI+ ILL +++GAIVL + +
Sbjct: 120 VAMRGGDQIRQLSTTLFADYLLPFEIASVILLAALVGAIVLARKEQ 165
>gi|124515807|gb|EAY57316.1| putative NADH dehydrogenase (ubiquinone), chain J [Leptospirillum
rubarum]
Length = 169
Score = 95.1 bits (235), Expect = 5e-18, Method: Composition-based stats.
Identities = 59/163 (36%), Positives = 91/163 (55%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
MQ F F +IS+ VV RNPIYSV SL+ F++ AGL+++L AEF+A + L+VY
Sbjct: 1 MQMAMFGYFGAAIVISALFVVYFRNPIYSVMSLLTMFMHIAGLYVILEAEFLAGVQLLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V +LF++M+L++ +K+ + I + + +
Sbjct: 61 AGAILVLYLFVVMLLNVQSRGRFIQKQTPAVVGLGILGIVEVVALIFHTRFYPELPAIPH 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
V N E IG VLYTQY +P EI+ +LL++++GAIVL
Sbjct: 121 PGVPTLGNTETIGMVLYTQYLFPFEIASLVLLIALVGAIVLAK 163
>gi|10802936|gb|AAG23684.1|AF288091_29 NADH dehydrogenase subunit 6 [Thraustochytrium aureum]
Length = 204
Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 110/204 (53%), Gaps = 12/204 (5%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ F +FSF +SSF V+ V P+ +V SLIF+F NAAGL + AEF+A++ L+VY
Sbjct: 1 MEFFLFCVFSFGLCVSSFNVIFVNKPVNAVLSLIFSFCNAAGLLFMAEAEFIAILFLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV--------CASNFMV 114
+GA+ V FLF+I+ML++ + F +L ++
Sbjct: 61 IGAIAVLFLFVIIMLNLKNIFFTEKFNESFPIILIFSLLFFIILFFNQLTFYSFEVTLFE 120
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH----RRD 170
+ +L+ N++ G+VLYT Y L I+GFILL+++I +I+L ++D
Sbjct: 121 LPSHIHWIKLIDSIGNIDLFGQVLYTYYFTYLLIAGFILLVAIIASIILTSNKSFLLKKD 180
Query: 171 IKRQDISKQLESNPDNSIVMVKVK 194
K+Q I QL NP+ ++ ++K K
Sbjct: 181 FKKQLIFSQLSRNPNKAVFLIKKK 204
>gi|257852634|gb|ACV71329.1| NADH dehydrogenase subunit 6 [Eliea articulata]
Length = 178
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQKKTAYLKYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|257852588|gb|ACV71306.1| NADH dehydrogenase subunit 6 [Mammea siamensis]
Length = 178
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGLIGLIFWWEMFFILDNESIPLLPTQRNTAYLKYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900528|gb|ABO41430.1| NADH dehydrogenase subunit 6 [Podocalyx loranthoides]
Length = 179
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTLVKRQDIFRRNAIDF 177
>gi|133900406|gb|ABO41369.1| NADH dehydrogenase subunit 6 [Carallia brachiata]
Length = 179
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLFLGLDFSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTYMRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|251773158|gb|EES53711.1| putative NADH dehydrogenase (ubiquinone), chain J [Leptospirillum
ferrodiazotrophum]
Length = 173
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 60/169 (35%), Positives = 94/169 (55%), Gaps = 1/169 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q L F+ F MA++ + LVVT R IYS +L+ FV+ AGLF++L A F+A + L+V
Sbjct: 1 MIQQLPFFYFGGMALVCAILVVTSRVAIYSAMALLGMFVHVAGLFIILEAPFLAGVQLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAEL-IVCASNFMVFSAEGE 120
Y GA++V +LF++M+L++ A +K+ I EL +
Sbjct: 61 YAGAILVLYLFVVMLLNLQGGGATSLQKQTPWAIALSLIAVGELGYLLVKTNFYPKLPAI 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
V N E IG VLYTQY +P E++ +LL++++GAIV+ R
Sbjct: 121 PHPSVPTLGNTETIGMVLYTQYLFPFEVASIVLLIALVGAIVMARGRGR 169
>gi|159901497|ref|YP_001547744.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Herpetosiphon aurantiacus ATCC 23779]
gi|159894536|gb|ABX07616.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Herpetosiphon
aurantiacus ATCC 23779]
Length = 220
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 13/174 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + + + + S +VVTVRN I+S LI +F+ A L+LL+ AEF+A++ ++VY GAV
Sbjct: 8 VFIVIALLTLGSGIMVVTVRNIIHSALWLIASFIGVAALYLLMEAEFLAVVQILVYAGAV 67
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE------ 120
+ LF IM+ + + I + +IV + E
Sbjct: 68 SILVLFAIMLTRQVTGEGVRVVFERWWVALLIALGLFGVIVPTLWQHGSTWEEASKLAQV 127
Query: 121 -------LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + IG+ +Y P E+ +LL+++IGAIV+
Sbjct: 128 GPAPVEGTAAAGLQVATATEIGRSFMGEYLLPFEVISILLLMALIGAIVIAYEE 181
>gi|327191015|gb|EGE58069.1| putative NADH-ubiquinone oxidoreductase protein, chain J [Rhizobium
etli CNPAF512]
Length = 166
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 1/167 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FF LF+ +++I++ VV RNP++S +L+ F+N + +F+LL A F+A+I + VY
Sbjct: 1 MDQGFFLLFAAVSVITALTVVLARNPVHSALALMACFLNISAIFVLLEAPFLAVIQIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF+IMM+D+ V + G L + + +L ++ +
Sbjct: 61 VGAIMVLFLFVIMMIDVREAVLQRFLPGGNLPALVLVVLLGVEMLVLVLW-SDRFSVIEP 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ G+ + + L+ Y P E + ILL +++GAIVL + +
Sbjct: 120 VAMRGGDQIRQLSTTLFADYLLPFEAASVILLAALVGAIVLARKEQE 166
>gi|206602051|gb|EDZ38533.1| Putative NADH dehydrogenase (ubiquinone), chain J [Leptospirillum
sp. Group II '5-way CG']
Length = 169
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 59/163 (36%), Positives = 90/163 (55%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
MQ F F +IS+ VV RNPIYSV SL+ F++ AGL+++L AEF+A + L+VY
Sbjct: 1 MQMAMFGYFGAAIVISALFVVYFRNPIYSVMSLLTMFMHIAGLYVILEAEFLAGVQLLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V +LF++M+L++ +K+ + I + +
Sbjct: 61 AGAILVLYLFVVMLLNVQSRGRFIQKQTPVVVGLGILGIVEVAALIFRTRFYPELPAIPH 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
V N E IG VLYTQY +P EI+ +LL++++GAIVL
Sbjct: 121 PGVPTLGNTETIGMVLYTQYLFPFEIASLVLLIALVGAIVLAK 163
>gi|257852654|gb|ACV71339.1| NADH dehydrogenase subunit 6 [Lophira lanceolata]
gi|257852656|gb|ACV71340.1| NADH dehydrogenase subunit 6 [Luxemburgia octandra]
Length = 178
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRDTSGLLLFLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYMVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|269794082|ref|YP_003313537.1| NADH dehydrogenase subunit J [Sanguibacter keddieii DSM 10542]
gi|269096267|gb|ACZ20703.1| NADH dehydrogenase subunit J [Sanguibacter keddieii DSM 10542]
Length = 290
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 73/148 (49%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+++ F+ + + ++++ ++ R +++ ++F V A +++ L A F+ ++ +VVY
Sbjct: 5 AEAVLFWCLAPLMVVAALGLLFARKAVHATLCVVFVMVCLAVMYVALEAPFLGIVQIVVY 64
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV++ FLF+IM++ +D + RG ++ L ++ V EG
Sbjct: 65 TGAVMMLFLFVIMLVGVDASDSLVETIRGQRLVGWLLGLGLGAVLVGVILRVSFPEGIGL 124
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISG 150
N I +VL+ + + LE+ G
Sbjct: 125 EAANAETNPVAIARVLFGDFVFNLEVVG 152
>gi|257852666|gb|ACV71345.1| NADH dehydrogenase subunit 6 [Croizatia brevipetiolata]
Length = 178
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV LI F + +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFLILVFCDTSGLLLFLGLDFSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQGNTTSLRYTVYAGKVGS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTKKVKRQDIFRRNA 174
>gi|218514978|ref|ZP_03511818.1| probable NADH-ubiquinone oxidoreductase protein, chain J [Rhizobium
etli 8C-3]
Length = 166
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 94/167 (56%), Gaps = 1/167 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FF LFS +++I++ VV RNP++S +L+ F+N + +F+LL A F+A+I + VY
Sbjct: 1 MDQGFFLLFSAVSVITALTVVLARNPVHSALALMACFLNISAIFVLLEAPFLAVIQIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF+IMM+D+ V + G L + + +L ++ +
Sbjct: 61 VGAIMVLFLFVIMMIDVREAVLQRFLPGGNLPALVLVVLLGVEMLVLVLW-SDRFSVIEP 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ G+ + + L+ Y P EI+ ILL++++GAIVL + +
Sbjct: 120 VAMRGGDQIRQLSTTLFADYLLPFEIASVILLVALVGAIVLARKEQE 166
>gi|257852576|gb|ACV71300.1| NADH dehydrogenase subunit 6 [Ploiarium alternifolium]
Length = 178
Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|297181765|gb|ADI17946.1| NADH:ubiquinone oxidoreductase subunit 6 (chain j) [uncultured
Desulfobacterales bacterium HF0200_07G10]
Length = 169
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 2/167 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ L FY + + ++ + VV +P+ S SLI + AG+F+L A F+A++ +++Y
Sbjct: 1 MELLIFYPLAGLCVLLALGVVFNNSPVGSAISLIGMMLGLAGIFILQQAHFIAILQIIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDI--EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
GA++V F+F+IM+L++ + +++ L S G+LA ++ S+ +
Sbjct: 61 AGAIMVLFMFVIMLLNLKKGDDTGWTAREKNLLLSILTGLLAIGILYKISDIIFSGKMAT 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ L V NIGK L+T Y P E++ +LL +M+GA+VL
Sbjct: 121 PAILPDSFGTVANIGKTLFTDYVLPFEVASILLLAAMVGAVVLAKTK 167
>gi|307318094|ref|ZP_07597530.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
meliloti AK83]
gi|306896135|gb|EFN26885.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sinorhizobium
meliloti AK83]
Length = 166
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 93/165 (56%), Gaps = 1/165 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F LF+ ++++++ +V RNP++S +L+ F+ + +F++LGA +A+I + VY
Sbjct: 1 MHQGSFLLFATVSVVTALTLVLARNPVHSALALMACFLQISAIFVMLGAPLLAVIQIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF+IMM+D+ V + G L + + +L +V + E
Sbjct: 61 VGAIMVLFLFVIMMVDVREAVLQRFMPGGNLPALALLVLLGAEMVVLVLWSDRFIESP-P 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
G+ + ++ K L++ Y P E++ ILL +++GAIVL +
Sbjct: 120 VAERGGDAIRDLSKTLFSDYLLPFEVASVILLAALVGAIVLARKE 164
>gi|133900420|gb|ABO41376.1| NADH dehydrogenase subunit 6 [Clusia rosea]
Length = 178
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRKTAYLKYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y +S ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLSSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|242239960|ref|YP_002988141.1| NADH dehydrogenase (quinone) [Dickeya dadantii Ech703]
gi|242132017|gb|ACS86319.1| NADH dehydrogenase (quinone) [Dickeya dadantii Ech703]
Length = 181
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + +A++++ V+T NP++++ LI + + AG+F LGA F + ++VY G
Sbjct: 2 EFAFYATAIIAVLATLRVITHTNPVHALLYLIISLLAVAGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V + K G + + + +++ +F G+ +
Sbjct: 62 AIMVLFVFVVMMLNLGHSVVDQEKAWLKPGVWIGPGILSLVLLGVIIKGIFRLNGQD--I 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + +R
Sbjct: 120 SGGMIDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREDKRG 165
>gi|54114097|gb|AAV29682.1| NT02FT1745 [synthetic construct]
Length = 201
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 57/198 (28%), Positives = 104/198 (52%), Gaps = 6/198 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV+ + FY F+ +AII + ++V NP+ SV ++IF F+ A ++++L ++A++ +V
Sbjct: 1 MVVTVILFYTFASLAIIFALVLVLANNPVNSVIAMIFTFIFTAAVWIILQQVYLALLLIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++ MLD+ +E + + + + I +
Sbjct: 61 VYVGAVLVMFLFVVFMLDLHVEEQGRVGRFF----YALAAVVVCAIFATVISYAATNVFA 116
Query: 121 LSRLVFKGNNVENIGKVLYTQ-YAYPLEISGFILLLSMIGAIVLMLR-HRRDIKRQDISK 178
+ + ++ IG +++ Y E+ FILL +M AI L LR R+ K D ++
Sbjct: 117 GAMMQGGVGGLKIIGLTMFSNANLYVFELVDFILLAAMTAAITLTLRAKRKGNKTVDPAQ 176
Query: 179 QLESNPDNSIVMVKVKSG 196
Q++ + + MVK+ S
Sbjct: 177 QVKVRAKDRLTMVKMPSN 194
>gi|133900518|gb|ABO41425.1| NADH dehydrogenase subunit 6 [Parnassia grandifolia]
Length = 179
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPIPVFRDTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETLPLLPTQRNTTSLRYMVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTQVKRQDVFRRNAIDF 177
>gi|257852744|gb|ACV71384.1| NADH dehydrogenase subunit 6 [Peridiscus lucidus]
Length = 178
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLQTQINTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNA 174
>gi|257852594|gb|ACV71309.1| NADH dehydrogenase subunit 6 [Garcinia macrophylla]
Length = 178
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRKTAYLKYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y +S ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLSSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900474|gb|ABO41403.1| NADH dehydrogenase subunit 6 [Hydnocarpus sp. Chase 1301]
Length = 181
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR--DIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGGVKRQDIFRRNAIDF 179
>gi|56791554|gb|AAW30315.1| NADH dehydrogenase subunit 6 [Amborella trichopoda]
Length = 179
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 61/179 (34%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+A +SS +V+ +NP++SVF I F N +GL +LLG +F A I LVVYVGA+ V FLF+
Sbjct: 1 IASVSSVMVIRAKNPVHSVFFFILVFFNTSGLLVLLGLDFFATIFLVVYVGAIAVLFLFV 60
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELS 122
++MLDI I R IG+L I + +
Sbjct: 61 VLMLDIKIAEIHENLLRHLPVGGIIGVLFLLEIFFLVDNDYIPILPTKLSTTYLTYTVYA 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVL-MLRHRRDIKRQDISKQL 180
+ N+E +G +LYT Y + ILL++MIGAIV + +KRQD+ ++
Sbjct: 121 EKIQSWTNLETLGNLLYTTYFVLFLVYSLILLVAMIGAIVQKTMHKTTRVKRQDVFRRN 179
>gi|77917828|ref|YP_355643.1| NADH dehydrogenase I subunit J [Pelobacter carbinolicus DSM 2380]
gi|77543911|gb|ABA87473.1| NADH dehydrogenase subunit J [Pelobacter carbinolicus DSM 2380]
Length = 171
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M +L FY+ + + ++++ L +T +NP+++V L+ A A L+ LLGA +A +++Y
Sbjct: 1 MATLLFYILAVITLLATLLCLTRKNPVHAVLYLVHALFAVALLYFLLGAPLLAAWQVILY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF+IM++D +++ G + L + ++ ++
Sbjct: 61 AGAIMVLFLFVIMLID---PSLAEKRRPGGWPRWLPAALLSGSLLACGGALIVMDPVATG 117
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+V G+ L+ Y +EI ILL + +GA L RH +
Sbjct: 118 GIVSFQLTPRAFGRALFENYGLAVEIISLILLFAAVGAFHLGRRHDSTTR 167
>gi|257852700|gb|ACV71362.1| NADH dehydrogenase subunit 6 [Viola pubescens]
Length = 178
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y +S ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|255318324|ref|ZP_05359559.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Acinetobacter
radioresistens SK82]
gi|262379068|ref|ZP_06072224.1| NADH:ubiquinone oxidoreductase subunit 6 [Acinetobacter
radioresistens SH164]
gi|255304636|gb|EET83818.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Acinetobacter
radioresistens SK82]
gi|262298525|gb|EEY86438.1| NADH:ubiquinone oxidoreductase subunit 6 [Acinetobacter
radioresistens SH164]
Length = 175
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AIIS+ VVT NP++++ SLI + + AG+FL++GA F + ++VY GA++
Sbjct: 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFLIVGAPFAGALEVIVYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV-FSAEGELSRLVF 126
V F+F++MML++ + E +K ++ L + L+ +M+ + L
Sbjct: 65 VLFVFVVMMLNLGQQTMEQERKWLNSSAWAYPALMSFLMGLILVWMLGGEYTTAGATLGR 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L+T Y +E++ +LL S++ A + R
Sbjct: 125 EIIGPKAVGQSLFTHYLLLVEVAAMLLLASLVAAFHIGRRE 165
>gi|313768549|ref|YP_004062223.1| NADH dehydrogenase subunit 6 [Plocamiocolax pulvinata]
gi|312844676|gb|ADR03239.1| NADH dehydrogenase subunit 6 [Plocamiocolax pulvinata]
Length = 200
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 5/196 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + ++FS +IS+ +V+ N ++SV LI F N A L L LGAEF++ + ++
Sbjct: 1 MNTEISITFIFSSFVLISALMVIYSSNAVHSVLFLILVFFNMAILLLFLGAEFISFLLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGA+ V FLF++MML+ I +K + I + + ++ +
Sbjct: 61 VYVGAIAVLFLFVVMMLNTKISSKNMDQKSIWPLGIIIFFIISSQFYNINSQNLVLVFDN 120
Query: 121 -----LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
F NN++ IGK+ YT Y++ +S F+LL++MIGAI L L H+ +IK+Q
Sbjct: 121 NILVLWFNESFFFNNIQVIGKLFYTYYSFLFFLSSFLLLIAMIGAITLTLHHKTNIKKQQ 180
Query: 176 ISKQLESNPDNSIVMV 191
I+ QL N SI +
Sbjct: 181 INTQLIRNYKGSIKFI 196
>gi|133900404|gb|ABO41368.1| NADH dehydrogenase subunit 6 [Calophyllum soulattri]
Length = 178
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTAYLKYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAI+L + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIILTMHRTTKVKRQDIFRRNAIDF 177
>gi|258593428|emb|CBE69767.1| NADH-quinone oxidoreductase chain J (NADH dehydrogenase I, chain J)
(NDH-1, chain J) [NC10 bacterium 'Dutch sediment']
Length = 168
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 96/168 (57%), Gaps = 4/168 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ L F + MA++++ LV+ +RNP+Y SL+ F+ +G++LLL A+F+A++ ++VY
Sbjct: 1 MEWLVFVPLAAMALVTAALVIVLRNPVYCALSLVGTFLALSGIYLLLQAQFIAVVQVIVY 60
Query: 63 VGAVIVFFLFIIMMLD----IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
GA++V FLF++M+LD + + R + +L I SN
Sbjct: 61 AGAIMVLFLFVVMLLDLGHELPAWLQRDRSRFLLGVGAAALLLLELAIPIGSNDSRAPQG 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
S +V N + +G++L+T + P EI+ ILL+++IGA+VL R
Sbjct: 121 PYTSEVVGAIGNAQLVGRLLFTDFLIPFEITSVILLIAIIGAMVLARR 168
>gi|133900556|gb|ABO41444.1| NADH dehydrogenase subunit 6 [Stachystemon axillaris]
Length = 179
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + ++KRQ I ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTEVKRQGIFRRNAIDF 177
>gi|257852640|gb|ACV71332.1| NADH dehydrogenase subunit 6 [Ixonanthes reticulata]
Length = 178
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNA 174
>gi|257852596|gb|ACV71310.1| NADH dehydrogenase subunit 6 [Aneulophus africanus]
Length = 178
Score = 94.3 bits (233), Expect = 8e-18, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQ+I ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQEIFRRNAIDF 177
>gi|196228500|ref|ZP_03127367.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Chthoniobacter flavus Ellin428]
gi|196227903|gb|EDY22406.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Chthoniobacter flavus Ellin428]
Length = 170
Score = 94.3 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 3/168 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FYLF+ + + VV RNP+ S L+ +F+ A LF+ L A F+A+I ++VY
Sbjct: 1 MSPILFYLFAALTVCFGIAVVANRNPVASALCLVVSFLGLAALFVGLDAYFIAVIQVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV+V FLFIIM+LD+ E ++G + + + + + +
Sbjct: 61 AGAVMVLFLFIIMLLDLKAETRRKPNLPAYVGGGLVALAFIAQLWLVLERYSAAHQPFPT 120
Query: 123 RLVFKG---NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+G ++V N+G L++ + P ++ G ++L++ IG +VL R
Sbjct: 121 MWASEGKSIDDVTNVGTTLFSVHNLPFQVIGVLILVATIGVVVLSKRE 168
>gi|257852592|gb|ACV71308.1| NADH dehydrogenase subunit 6 [Garcinia latissima]
Length = 178
Score = 94.3 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIQLLPTQRKTAYLKYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y +S ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLSSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|255019916|ref|ZP_05291991.1| NADH-ubiquinone oxidoreductase chain J [Acidithiobacillus caldus
ATCC 51756]
gi|254970696|gb|EET28183.1| NADH-ubiquinone oxidoreductase chain J [Acidithiobacillus caldus
ATCC 51756]
Length = 198
Score = 94.3 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 113/194 (58%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M++ +L FY+FS + ++S+ LV+T RNP+Y+ L+ AF NAA LFLLLGAEF+ +I ++
Sbjct: 1 MLVTTLLFYVFSAILLLSALLVITARNPVYASLYLVLAFFNAAALFLLLGAEFLGLILIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V FLF++MMLDI++ + + IL +
Sbjct: 61 VYVGAVMVLFLFVVMMLDINLARLQEGFLHYLPLGLAVAILGVLELAAVFWTAPLGHVPA 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
+ L +N +G +LYTQY YP EI+ ILL+++I AI L LR R K QDI +QL
Sbjct: 121 PAALPANADNTRALGGLLYTQYLYPFEIAAVILLIAIIAAIALTLRRRPQSKTQDIGRQL 180
Query: 181 ESNPDNSIVMVKVK 194
+ +V ++
Sbjct: 181 AVKVSERLRLVDLR 194
>gi|257852604|gb|ACV71314.1| NADH dehydrogenase subunit 6 [Dalechampia spathulata]
Length = 178
Score = 94.3 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQ++ ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTRVKRQELFRRNA 174
>gi|109156446|ref|YP_654278.1| NADH dehydrogenase subunit 6 [Pseudopterogorgia bipinnata]
gi|108513891|gb|ABF93174.1| NADH dehydrogenase subunit 6 [Pseudopterogorgia bipinnata]
Length = 185
Score = 94.3 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 96/187 (51%), Gaps = 17/187 (9%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFIIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAIMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IM++ +V + L L+ +S ++ + ++
Sbjct: 64 AILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSSRYIS-------NPVIG 116
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD----------IKRQDI 176
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 117 SRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPFLYNSHGESLRSRQDL 176
Query: 177 SKQLESN 183
Q+
Sbjct: 177 FLQISRE 183
>gi|133900410|gb|ABO41371.1| NADH dehydrogenase subunit 6 [Caryocar glabrum]
Length = 179
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V NP++SV I F++ +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAPNPVHSVLFPILVFLDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|227488699|ref|ZP_03919015.1| NADH dehydrogenase subunit J [Corynebacterium glucuronolyticum ATCC
51867]
gi|227091360|gb|EEI26672.1| NADH dehydrogenase subunit J [Corynebacterium glucuronolyticum ATCC
51867]
Length = 282
Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 7/198 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ + + I + +V + I+S L+ V A + +GA FV ++ +VVY GAV+V
Sbjct: 27 WILAAVIIAGAIGMVMCKELIHSALCLLLVMVGVAIEYATMGAPFVFVVQIVVYAGAVMV 86
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS-----R 123
LFI+MM+ E A+ K + +AA ++ V +
Sbjct: 87 MILFIVMMVGARGEAADGEKTATGTSHTVLTGVAAIALLALIGIAVNMSTLTAPRGMSEA 146
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR--RDIKRQDISKQLE 181
G NV +G ++ +Y E+ +L+++ +GA++++ R R + ++++S+
Sbjct: 147 NAEHGGNVAGLGVEIFNKYVVGFEVLSALLIVAAVGAMIMIFRVRAVKRSTQRELSQARF 206
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ V + G+
Sbjct: 207 RAYKERGINVGPLAASGV 224
>gi|298346127|ref|YP_003718814.1| NADH dehydrogenase subunit J [Mobiluncus curtisii ATCC 43063]
gi|304390113|ref|ZP_07372067.1| NADH-quinone oxidoreductase subunit J [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|298236188|gb|ADI67320.1| NADH dehydrogenase subunit J [Mobiluncus curtisii ATCC 43063]
gi|304326595|gb|EFL93839.1| NADH-quinone oxidoreductase subunit J [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 324
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q++F S +A+I++ V +++ ++ V AG++ +GAEF+ + +VV
Sbjct: 16 TGQTIFVAACSALALIAALGVALSNRAVHAAVYMVAMMVCVAGIYFSVGAEFLGAVQIVV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF+IM++ + + K G + + + ++A ++ V +
Sbjct: 76 YTGAIMMMFLFVIMLVGVQAVDSPRDSKVGTVAAAVLLVVAFGIMAIV--AAVNTTVNGA 133
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
N + + Y PLE+ +L+++ +GA+ L
Sbjct: 134 PARPSGDPNPVRLASEVINTYYAPLEMVATLLIVAAVGAMSLTHSE 179
>gi|124484827|ref|YP_001031209.1| NADH dehydrogenase subunit 6 [Amphimedon queenslandica]
gi|113952599|gb|ABI48998.1| NADH dehydrogenase subunit 6 [Amphimedon queenslandica]
Length = 197
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 91/176 (51%), Gaps = 8/176 (4%)
Query: 16 IISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIM 75
++S+ V++ P+Y+V LI AF++ + +F+ +G ++ I ++VYVGA+ + FLF++M
Sbjct: 5 VVSAVKVISAVRPVYAVLWLISAFLSVSAVFIFIGLVYMGFIMIIVYVGAIAILFLFVMM 64
Query: 76 MLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR----LVFKGNNV 131
MLD E A +G+ + ++ + G ++
Sbjct: 65 MLDQGKEEAGTPIVNIIPMGMIVGVGFLWVAATGGEWVGAYITQQNHSRGMIGGQPGGDI 124
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR----DIKRQDISKQLESN 183
IG+V+YT+Y+Y I +ILL++M+GAIVL RH + RQD+ Q +
Sbjct: 125 VAIGRVVYTEYSYMFIIVSYILLVAMVGAIVLTHRHGEYGPDEPMRQDVYIQTSRD 180
>gi|133900554|gb|ABO41443.1| NADH dehydrogenase subunit 6 [Scyphostegia borneensis]
Length = 179
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 83/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRKTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDLFRRNA 174
>gi|164420963|ref|YP_001648530.1| NADH dehydrogenase subunit 6 [Callyspongia plicifera]
gi|158668102|gb|ABW76564.1| NADH dehydrogenase subunit 6 [Callyspongia plicifera]
Length = 183
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 102/178 (57%), Gaps = 2/178 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F++F+F AIIS F V+TV +P+ SV LI F++A+ LF+LL EF+A I L+VYVGA+
Sbjct: 4 LFFIFAFGAIISGFKVITVFSPVASVLWLIMTFISASALFILLEVEFIAFIFLIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IMML++ V F IG++ I+ + +V
Sbjct: 64 AILFLFVIMMLNLTEMVIFSNAANYFSAGLIIGVVFLFEILTFLKGTIDGGRMVQYLVVP 123
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH-RRDIKRQDISKQLESN 183
N +E +G+VLYT Y Y IS FILL++MIGAI+L H +D K QDI Q
Sbjct: 124 NPN-IEVLGRVLYTDYYYLFIISSFILLVAMIGAIILTHDHIIQDRKGQDIFVQTSRQ 180
>gi|323260324|gb|EGA43943.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
Length = 284
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ L+ + + +G+F LGA F + ++VY G
Sbjct: 2 EFAFYICGLIAILATLRVITHTNPVHALLYLVISLLAISGVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E ++ + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAVLSAIMLAVIVYAILGVNDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R
Sbjct: 120 DGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGREERAG 165
>gi|256390060|ref|YP_003111624.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Catenulispora
acidiphila DSM 44928]
gi|256356286|gb|ACU69783.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Catenulispora
acidiphila DSM 44928]
Length = 195
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ L VTVRN +++ L+ A AG +LLL AEFVA + +++YVG
Sbjct: 14 EITFVLVGLLTFGAAVLTVTVRNLVHAALWLVVALGGLAGCYLLLAAEFVAWVQVLIYVG 73
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV V LF +M+ I + +G+ A ++V V + + R
Sbjct: 74 AVAVLLLFGLMLTRAPIGRTTELDSGNRWAAAVVGLATAGVLVTVIGDAVRTTWFDPRRN 133
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
V + +G L+ + P E+ +LL +++GAIVL R
Sbjct: 134 VVN-GTAKAVGSSLFRYWVLPFELLSVLLLAALVGAIVLSRR 174
>gi|253989008|ref|YP_003040364.1| NADH dehydrogenase subunit J [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253780458|emb|CAQ83620.1| nadh dehydrogenase i chain j (nadh-ubiquinone oxidoreductase chain
j) [Photorhabdus asymbiotica]
Length = 181
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY +AI+++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFTFYTAGLVAILATIRVITHTNPVHALLYLIVSLLALSAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS--AEGELS 122
A++V F+F++MML++ V E + ++ + + +++ + + +
Sbjct: 62 AIMVLFVFVVMMLNLGKSVVEQERVWLKPRTWIGPGILSAVLLVILVYTIINVSHGNIAD 121
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + + +G L+ Y +E++ +LL M+ A + H++
Sbjct: 122 NITGEVISAKEVGISLFGPYVLAVELASLLLLAGMVVAYHIGREHKQG 169
>gi|257852590|gb|ACV71307.1| NADH dehydrogenase subunit 6 [Montrouziera cauliflora]
Length = 178
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRETSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRKTAYLKYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y +S ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLSSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|315657370|ref|ZP_07910252.1| NADH-quinone oxidoreductase subunit J [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315491842|gb|EFU81451.1| NADH-quinone oxidoreductase subunit J [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 324
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q++F S +A+I++ V +++ ++ V AG++ +GAEF+ + +VV
Sbjct: 16 TGQTIFVAACSALALIAALGVALSNRAVHAAVYMVAMMVCVAGIYFSVGAEFLGAVQIVV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF+IM++ + + K G + + + ++A ++ V +
Sbjct: 76 YTGAIMMMFLFVIMLVGVQAVDSPRDSKVGTVAAAVLLVVAFGIMAIV--AAVNTTVNGA 133
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
N + + Y PLE+ +L+++ +GA+ L
Sbjct: 134 PARPSGDPNPVRLASEVINTYYAPLEMVATLLIVAAVGAMSLTHSE 179
>gi|193216256|ref|YP_001997455.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Chloroherpeton thalassium ATCC 35110]
gi|193089733|gb|ACF15008.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Chloroherpeton thalassium ATCC 35110]
Length = 178
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 3/161 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY F+ ++++S VV RN IYS FSL+F F A +++ L A+FVA+ +VVYVG +
Sbjct: 9 IFYFFAVLSVVSGMFVVFSRNIIYSAFSLLFTFFGVAAIYVFLSADFVAVTQIVVYVGGI 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V LF +M + + + + K L ++ + M++ A
Sbjct: 69 LVLLLFGVMFTNK---IYQVQLKTDVLNFIPGLLIMLATMGALLYTMIYRANWFHGEKEI 125
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
G VE IG + + Y P EI+ +LL+++IGA L
Sbjct: 126 SGTVVEQIGVEIMSNYVLPFEIASIVLLVALIGAAFLARAE 166
>gi|262195157|ref|YP_003266366.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Haliangium
ochraceum DSM 14365]
gi|262078504|gb|ACY14473.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Haliangium
ochraceum DSM 14365]
Length = 282
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 12/175 (6%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
SL F+LF+ + + S V+T RN I +V ++ F A ++ +L A F+A I ++VY G
Sbjct: 93 SLMFWLFALLTVGGSIFVITRRNLISAVMGMVGTFFAIAAVYTMLFAHFLAAIQVLVYAG 152
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F+IM+L+ + R + + A + V + +L
Sbjct: 153 AIMVLFVFVIMILNKPEDEPWGRSGIIGNVLGSALVAYLLWRIGAVLWAVPVSPAQLLPP 212
Query: 125 ------------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V + IG+ L+ Y +P E +LL++++GA+ + H
Sbjct: 213 GGVTVVTGVTETVHDYGSTMAIGQNLFRDYLFPFEAVSLVLLIAVVGALAVARPH 267
>gi|86359319|ref|YP_471211.1| NADH-ubiquinone oxidoreductase chain J protein [Rhizobium etli CFN
42]
gi|86283421|gb|ABC92484.1| probable NADH-ubiquinone oxidoreductase chain J protein [Rhizobium
etli CFN 42]
Length = 166
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 94/167 (56%), Gaps = 1/167 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FF LF+ +++I++ VV RNP++S +L+ F+N + +F+LL A F+A+I + VY
Sbjct: 1 MDQGFFLLFATVSVITALTVVLARNPVHSALALMACFLNISAIFVLLEAPFLAVIQIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V F+F+IMM+D+ V + G L + + +L ++ +
Sbjct: 61 VGAIMVLFVFVIMMIDVREAVLQRFLPGGNLPALVLVVLLGVEMLVLVLW-SDRFSVIEP 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ G+ + + L+ Y P EI+ ILL ++IGAIVL + ++
Sbjct: 120 VAMRGGDQLRQLSTTLFADYLLPFEIASVILLAALIGAIVLARKEQQ 166
>gi|91203928|emb|CAJ71581.1| similar to NADH dehydrogenase I subunit J [Candidatus Kuenenia
stuttgartiensis]
Length = 169
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 92/169 (54%), Gaps = 3/169 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ FY+ + +++++ ++ +NPIY L+F+F+N A L++LL A+F+A + ++VY
Sbjct: 1 MEPYLFYVMAATSVVAALYLIFEKNPIYCALYLVFSFLNIAVLYVLLEAQFIAAVQIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---CASNFMVFSAEG 119
GA++V FLF+IM+L + E + + L +I+ S
Sbjct: 61 TGAIMVLFLFVIMLLMTNSEQKQKDGLPFQRIPAMVLGLVLLIIMGLTIKSKLFQGREGI 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
S V + + +GK+L+T Y P E++ +L +++IGAI+L R +
Sbjct: 121 YTSAKVESIGHTQLVGKLLFTDYLLPFEMTSVLLFVAVIGAIILAKRKQ 169
>gi|133900444|gb|ABO41388.1| NADH dehydrogenase subunit 6 [Erythrococca sp. Cheek s.n.]
Length = 179
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 11/174 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFSVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDLFRRNA 174
>gi|253689140|ref|YP_003018330.1| NADH dehydrogenase (quinone) [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755718|gb|ACT13794.1| NADH dehydrogenase (quinone) [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 186
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 88/167 (52%), Gaps = 4/167 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY +AI+++ V+T NP++++ ++ + + AG+F LGA F ++++VY G
Sbjct: 2 EFAFYTTGLIAILATLRVITHTNPVHALLYMVTSLMAIAGVFFSLGANFAGALSIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-GILAAELIVCASNFMVFSAEGELSR 123
A++V F+F++MML++ V E + ++ GIL+ L+V N ++ E ++
Sbjct: 62 AIMVLFVFVVMMLNLGNSVEEQERNWLKPSAWVGPGILSLALLVIVVNAILSLKEQGITG 121
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + +R
Sbjct: 122 TPVE---AKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREDKRG 165
>gi|227542302|ref|ZP_03972351.1| NADH dehydrogenase subunit J [Corynebacterium glucuronolyticum ATCC
51866]
gi|227181902|gb|EEI62874.1| NADH dehydrogenase subunit J [Corynebacterium glucuronolyticum ATCC
51866]
Length = 283
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 7/198 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ + + I + +V + I+S L+ V A + +GA FV ++ +VVY GAV+V
Sbjct: 28 WILAAVIIAGAIGMVMCKELIHSALCLLLVMVGVAIEYATMGAPFVFVVQIVVYAGAVMV 87
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS-----R 123
LFI+MM+ E A+ K + +AA ++ V +
Sbjct: 88 MILFIVMMVGARGEAADGEKTATGTSHTVLTGVAAIALLALIGIAVNMSTLTAPRGMSEA 147
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR--RDIKRQDISKQLE 181
G NV +G ++ +Y E+ +L+++ +GA++++ R R + ++++S+
Sbjct: 148 NAEHGGNVAGLGVEIFNKYVVGFEVLSALLIVAAVGAMIMIFRVRAVKRSTQRELSQARF 207
Query: 182 SNPDNSIVMVKVKSGKGI 199
+ V + G+
Sbjct: 208 RAYKERGINVGPLAASGV 225
>gi|164421209|ref|YP_001648662.1| NADH dehydrogenase subunit 6 [Igernella notabilis]
gi|158939021|gb|ABW83942.1| NADH dehydrogenase subunit 6 [Igernella notabilis]
Length = 175
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 92/174 (52%), Gaps = 4/174 (2%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y F +AII +V+ N ++SV LI AF++ G+F L +++A I +++YVGA+ V
Sbjct: 5 YFFILLAIICGLMVILTTNAVHSVIWLIGAFLSVTGIFFWLKXDYLAFILIIIYVGAISV 64
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IMML+++ E K + FI +I+ S F+ +
Sbjct: 65 LFLFVIMMLNLNNLTNEMNKVKTLGPGLFISAFLFLIILGQSAFVGGFRW----DPITCL 120
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+N++ IG LY+ Y + + +ILL++MIG IVL K+Q++ Q+
Sbjct: 121 SNIQLIGIELYSGCYYLIILVSYILLVAMIGVIVLARELNSGAKKQNMYIQINR 174
>gi|227822760|ref|YP_002826732.1| putative NADH-ubiquinone oxidoreductase chain J protein
[Sinorhizobium fredii NGR234]
gi|227341761|gb|ACP25979.1| putative NADH-ubiquinone oxidoreductase chain J protein
[Sinorhizobium fredii NGR234]
Length = 166
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FF LF+ +A+I++ +VV RNP++S +L+ F+ + +F+LL A +A++ + VY
Sbjct: 1 MDQGFFLLFAAVAVITALIVVLARNPVHSALALMACFLQISAVFVLLEAPLLAVVQIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF+IMM+D+ V + G L + + +L ++
Sbjct: 61 VGAIMVLFLFVIMMIDVREAVLQRFLPGGNLPALVLLVLLGAEMLVLV-LSSERFSATEP 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
G+ + L+ Y P E++ ILL +++GAIVL +
Sbjct: 120 AAKGGGDQIREFSTTLFADYLLPFEVASVILLAALVGAIVLARKE 164
>gi|329944211|ref|ZP_08292470.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Actinomyces
sp. oral taxon 170 str. F0386]
gi|328530941|gb|EGF57797.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Actinomyces
sp. oral taxon 170 str. F0386]
Length = 331
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 72/169 (42%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F + + + + V+T + + + ++I ++ A L+++ + F+ + +VVY
Sbjct: 30 EAIVFGVVALVTVACGIGVLTAKRAVTAAINMIGIMISLAVLYIVNESPFMGITQVVVYT 89
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV+ LF+IM++ + + I + A+ +
Sbjct: 90 GAVMTLVLFVIMLVGVGGDEPVGAAGSVMRRPVLILLGLGLAGFLAAVVWRAALPTPAGL 149
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + LY + +E++ +L+++ +GA+ L R R +
Sbjct: 150 KDGAKAAPDLLAVTLYNDHVVTMELTAILLIVAAVGALTLTHRQRIRAR 198
>gi|56791576|gb|AAW30326.1| NADH dehydrogenase subunit 6 [Zamia integrifolia]
Length = 181
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 11/181 (6%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
S A++ +VV NP++ V I F N +GL LL G + AMI+ VV++GA+ F
Sbjct: 1 LSSPALVPGSMVVRAENPVHPVSFPIPVFRNTSGLLLLSGPDLSAMISPVVHIGAIAALF 60
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAE----------G 119
++MML+I I + R S IG IL E+ + + N + S
Sbjct: 61 SSVVMMLNIKIAEIHEKVSRYSPVSGIIGPILRWEMFLISDNDHIPSLPTYIGTTSLRYT 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
+ + N E +G +L+T Y+ +S + L++MIGAIVL + +KRQD+ ++
Sbjct: 121 VHAGEIQSWTNSETLGNLLHTYYSVRFLVSSPVPLVAMIGAIVLTMHRTTKVKRQDVFRR 180
Query: 180 L 180
Sbjct: 181 N 181
>gi|218900420|ref|YP_002448831.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus G9842]
gi|218543477|gb|ACK95871.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus G9842]
Length = 174
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 91/170 (53%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + ++
Sbjct: 1 MNGEFVAFFILSLTAIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ + E R FF + ++ A N + F+ E
Sbjct: 61 LYSGAITIIMIFGIMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANEST 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L NN IG +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 120 QGSLPLHENNTLQIGTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 169
>gi|37526969|ref|NP_930313.1| NADH dehydrogenase subunit J [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786402|emb|CAE15455.1| NADH dehydrogenase I chain J (NADH-ubiquinone oxidoreductase chain
J) [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 181
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY +AI+++ V+T NPI+++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFTFYTAGLIAILATIRVITHTNPIHALLYLIVSLLALSAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS--AEGELS 122
A++V F+F++MML++ V E + ++ + + +++ + + +
Sbjct: 62 AIMVLFVFVVMMLNLGKSVVEQERVWLKPRTWIGPGILSTMLLVVLVYTIINVSHGDIAD 121
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + + +G L+ Y +E++ +LL M+ A + H++
Sbjct: 122 NITGEVVSAKEVGISLFGPYVLAVELASLLLLAGMVVAYHIGREHKQG 169
>gi|332883535|gb|EGK03818.1| hypothetical protein HMPREF9456_01885 [Dysgonomonas mossii DSM
22836]
Length = 167
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M ++ FY+ + + + + L V +NPI+S +I F + +G FLLL A F+++I +VVY
Sbjct: 1 MITIIFYILATITLGTGLLTVLSKNPIHSAVYMIICFFSISGHFLLLNALFLSVINIVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V LF +M++++ EP+KK + I +++ A+
Sbjct: 61 AGAIMVLLLFTLMLMNLSESH-EPKKKVISRVAATISSCLMGIVLLAALLKATPVIETYK 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+V IG+VL +Y P E + +L+ +MIGA+++ + ++
Sbjct: 120 AEGLDYQSVNIIGQVLLDEYLVPFEFAAILLITAMIGAVLISKKEKK 166
>gi|324329242|gb|ADY24502.1| NADH:ubiquinone oxidoreductase subunit J [Bacillus thuringiensis
serovar finitimus YBT-020]
Length = 174
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S AII L++ V ++ + +L+ F++ AGL+ LL AEF+ + ++
Sbjct: 1 MNGEFIAFFILSLSAIIGGILMLNVTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ + E R FF + ++ A N + F+ E
Sbjct: 61 LYSGAITIIMIFGIMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANEST 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L N IG +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 120 QGSLPLHEKNTLQIGTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 169
>gi|195953135|ref|YP_002121425.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Hydrogenobaculum sp. Y04AAS1]
gi|195932747|gb|ACG57447.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Hydrogenobaculum sp. Y04AAS1]
Length = 173
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 2/170 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + FYLF ++II VV+ NPIY V L+ A + +G+F GAE + + L+V
Sbjct: 1 MLNQIAFYLFGGISIICGLGVVSASNPIYVVLWLLGALIAISGIFFSAGAELLGALQLMV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF--FIGILAAELIVCASNFMVFSAEG 119
YV A+ VF++ II + + R + FI +L E + + + +
Sbjct: 61 YVVAIAVFYILIITAVPWRKLHKNEQHNRLIGVTVLPFIALLYVEAFIVGISGVSITKNK 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + N E IG L++ Y + E+ +LL+SMIGAI+L + +
Sbjct: 121 IIETITKNYGNAEVIGIKLFSTYFWAFELMSVLLLISMIGAILLGRKEEK 170
>gi|257852578|gb|ACV71301.1| NADH dehydrogenase subunit 6 [Anthodiscus amazonicus]
Length = 178
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V NP++SV I F++ +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAPNPVHSVLFSILVFLDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|321268733|gb|ADW79182.1| NADH dehydrogenase subunit 6 [Cyanophora paradoxa]
Length = 220
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 23/209 (11%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
LFF+LFS AIISSF+ +T + IYSVF LI F NAAGL ++LGAEF+AM+ LVVY+GA
Sbjct: 12 LFFFLFSLGAIISSFIAITTNSSIYSVFYLILVFFNAAGLLIMLGAEFLAMLFLVVYLGA 71
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAE--------------------- 104
+ + FLF+IMML+I I + + G F + +
Sbjct: 72 IAILFLFVIMMLNIKINQFKNKIILGAQVFFITLLFSLIYINIPHNSFINLSEILTFNDS 131
Query: 105 --LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIV 162
LI+ +N+ + + F + ++YTQYAY +S ILL+S+IGAIV
Sbjct: 132 EKLILFLNNYSIQLNNLFYNINSFNYITNSHQFFIVYTQYAYYFLLSALILLVSLIGAIV 191
Query: 163 LMLRHRRDIKRQDISKQLESNPDNSIVMV 191
L L + ++K+QD++KQ+ N +I V
Sbjct: 192 LTLHKKINVKKQDLNKQINRNFQTTIKTV 220
>gi|295837074|ref|ZP_06824007.1| NADH dehydrogenase subunit [Streptomyces sp. SPB74]
gi|197697181|gb|EDY44114.1| NADH dehydrogenase subunit [Streptomyces sp. SPB74]
Length = 250
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F LF + ++ + VT + +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 21 EIAFVLFGLLTFGAALVTVTTKQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 80
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I ++ R + + +LAA +V F
Sbjct: 81 SVVVLLLFGLMLTRAPIGRSDEADSRNRPLAATVAVLAAAGLVWVV-ADAFRTTYLDLDG 139
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
G L+ + P E +LL +++GAIVL R
Sbjct: 140 DHPQGTTAVTGAFLFRHWVLPFEALSVLLLAALVGAIVLSRR 181
>gi|257852574|gb|ACV71299.1| NADH dehydrogenase subunit 6 [Bonnetia sessilis]
Length = 178
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 85/177 (48%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHESVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTAYLQYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + G ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFFLQGLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 177
>gi|109156547|ref|YP_654332.1| NADH dehydrogenase subunit 6 [Astrangia sp. JVK-2006]
gi|108744082|gb|ABG02306.1| NADH dehydrogenase subunit 6 [Astrangia sp. JVK-2006]
Length = 186
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 7/175 (4%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
I S +VV+ NP+ S+F L+ FVN+A FLLLG +F+A++ L+VYVGA+ V FLF++
Sbjct: 12 TIGSGIMVVSALNPVLSIFWLVLVFVNSAVFFLLLGVDFLALMFLLVYVGAIAVLFLFVV 71
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-------AEGELSRLVFK 127
M+L++ R++ IG L F + +
Sbjct: 72 MLLNLTDYPPVFREEIDMTNYIPIGFLIGVFFFSEIASSWFIISPRVESWDLSFPWFLVS 131
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+N+E +G+VLY ++ F+LL++MIG IVL K+QD+ Q+
Sbjct: 132 YHNIEALGQVLYVACFCLFLLASFVLLVAMIGVIVLTQETEPLTKKQDLFIQINR 186
>gi|56791580|gb|AAW30328.1| NADH dehydrogenase subunit 6 [Eschscholzia californica]
Length = 178
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F + +GL LLLG +F AMI+ VV++GA+ V
Sbjct: 1 VLSSPALVSGLMVARAKNPVHSVSFPIPVFRDTSGLLLLLGLDFSAMISPVVHIGAIAVS 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 61 FLFVVMMFHIQIAETHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTHRNTTSLRY 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ V N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+
Sbjct: 121 TVHAGKVRSWTNLETLGNLLYTYYSVRFLVPSLILLVAMIGAIVLTMHRTTKVKRQDV 178
>gi|30023327|ref|NP_834958.1| NADH dehydrogenase subunit J [Bacillus cereus ATCC 14579]
gi|218235796|ref|YP_002370069.1| NADH dehydrogenase subunit J [Bacillus cereus B4264]
gi|296505721|ref|YP_003667421.1| NADH dehydrogenase subunit J [Bacillus thuringiensis BMB171]
gi|29898888|gb|AAP12159.1| NADH-quinone oxidoreductase chain J [Bacillus cereus ATCC 14579]
gi|218163753|gb|ACK63745.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus B4264]
gi|296326773|gb|ADH09701.1| NADH dehydrogenase subunit J [Bacillus thuringiensis BMB171]
gi|326943092|gb|AEA18988.1| NADH dehydrogenase subunit J [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 174
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 91/170 (53%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + ++
Sbjct: 1 MNGEFVAFFILSLSAIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ + E R FF + ++ A N + F+ E
Sbjct: 61 LYSGAITIIMIFGIMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNVDFANEST 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L NN IG +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 120 QGSLPLHENNTLQIGTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 169
>gi|75764475|ref|ZP_00743962.1| NADH-quinone oxidoreductase chain J [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74488038|gb|EAO51767.1| NADH-quinone oxidoreductase chain J [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 174
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 91/170 (53%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + ++
Sbjct: 1 MNGEFVAFFILSLSAIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ + E R FF + ++ A N + F+ E
Sbjct: 61 LYSGAITIIMIFGIMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANEST 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L NN IG +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 120 QGSLPLHENNTLQIGTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 169
>gi|3914179|sp|O63849|NU6M_SARGL RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|3132794|gb|AAC16383.1| NADH dehydrogenase subunit 6 [Sarcophyton glaucum]
Length = 185
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 95/187 (50%), Gaps = 17/187 (9%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IM++ ++ + L L+ + ++ + ++
Sbjct: 64 AILFLFVIMLIQQPNKIDSQDHSHFLPIGLSVIFLFYSLLTNSPKYIS-------NPVIG 116
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD----------IKRQDI 176
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 117 SRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPFLYNSHGESLRSRQDL 176
Query: 177 SKQLESN 183
Q+
Sbjct: 177 FLQISRE 183
>gi|42784464|ref|NP_981711.1| NADH dehydrogenase subunit J [Bacillus cereus ATCC 10987]
gi|118480335|ref|YP_897486.1| NADH dehydrogenase subunit J [Bacillus thuringiensis str. Al Hakam]
gi|196045757|ref|ZP_03112987.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus
03BB108]
gi|206976921|ref|ZP_03237823.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus
H3081.97]
gi|217962783|ref|YP_002341359.1| NADH dehydrogenase subunit J [Bacillus cereus AH187]
gi|222098765|ref|YP_002532823.1| NADH dehydrogenase subunit j [Bacillus cereus Q1]
gi|225867271|ref|YP_002752649.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus
03BB102]
gi|301056761|ref|YP_003794972.1| NADH dehydrogenase subunit J [Bacillus anthracis CI]
gi|42740396|gb|AAS44319.1| NADH dehydrogenase I, J subunit [Bacillus cereus ATCC 10987]
gi|118419560|gb|ABK87979.1| NADH dehydrogenase subunit J [Bacillus thuringiensis str. Al Hakam]
gi|196023588|gb|EDX62265.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus
03BB108]
gi|206744887|gb|EDZ56292.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus
H3081.97]
gi|217062987|gb|ACJ77237.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus AH187]
gi|221242824|gb|ACM15534.1| NADH dehydrogenase I, J subunit [Bacillus cereus Q1]
gi|225787352|gb|ACO27569.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus
03BB102]
gi|300378930|gb|ADK07834.1| NADH dehydrogenase subunit J [Bacillus cereus biovar anthracis str.
CI]
Length = 174
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + ++
Sbjct: 1 MNGEFIAFFILSLSAIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ + E R FF + ++ A N + F+ E
Sbjct: 61 LYSGAITIIMIFGIMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANEST 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L N IG +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 120 QGSLPLHEKNTLQIGTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 169
>gi|297201680|ref|ZP_06919077.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces sviceus ATCC 29083]
gi|197710947|gb|EDY54981.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces sviceus ATCC 29083]
Length = 248
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ + VT + +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 17 EIAFLLVGLVTFGAAIVTVTTKQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 76
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + AA +V + +L
Sbjct: 77 SVVVLLLFGLMLTRAPIGRSPDADSGNRWAALVVALAAAAALVWVVADAFRTTWIDLDGP 136
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ E G L+ + P E +LL +++GAIVL + + +
Sbjct: 137 AA--GSTEATGASLFQNWVLPFEALSVLLLAALVGAIVLSRKAKAES 181
>gi|150026253|ref|YP_001297079.1| NADH dehydrogenase I, J subunit [Flavobacterium psychrophilum
JIP02/86]
gi|149772794|emb|CAL44278.1| NADH dehydrogenase I, J subunit [Flavobacterium psychrophilum
JIP02/86]
Length = 170
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 88/169 (52%), Gaps = 1/169 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY S + + ++ L + +NPI+S L+ F + AG +LL A+F+A++ ++
Sbjct: 1 MSILLIIFYFLSAITLATALLTIISKNPIHSAIYLVICFFSVAGHYLLFNAQFLAIVHII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA++V FLF IM+++++ EP K + + ++ A
Sbjct: 61 VYSGAIMVLFLFTIMLMNLNE-EGEPHKIMATKLAAVVSFGLVCFVMLAVFIKAMPKMET 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+++ +GKVL +Y P E + +LL++M+G ++L + ++
Sbjct: 120 YRASGQDFQSIKVLGKVLLNEYMVPFEFASILLLVAMMGVVLLSKKEKK 168
>gi|109156463|ref|YP_654358.1| NADH dehydrogenase subunit 6 [Mussa angulosa]
gi|109156491|ref|YP_654345.1| NADH dehydrogenase subunit 6 [Colpophyllia natans]
gi|108744096|gb|ABG02319.1| NADH dehydrogenase subunit 6 [Colpophyllia natans]
gi|108744110|gb|ABG02332.1| NADH dehydrogenase subunit 6 [Mussa angulosa]
Length = 186
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 8/187 (4%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M++L F F I+S +VV+ NP+ S+F L+ FVN+A FL L +F+A++ L+VY
Sbjct: 1 MEALIFCFF-LSTIVSGIMVVSALNPVLSIFWLVLVFVNSAVFFLWLEVDFLALMFLLVY 59
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------ 116
VGA+ V FLF++M+L++ R++ +G L
Sbjct: 60 VGAIAVLFLFVVMLLNLTDYPPVFREEVDMTNYMPVGFLIGGFFFSEIASSWSIIFPRVE 119
Query: 117 -AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + +N+E +G+VLY ++GF+LL++M+G IVL K+QD
Sbjct: 120 SWDLSFPWFLVSYHNIEALGQVLYIPCFCLFFLAGFVLLVAMVGVIVLTQELEPLTKKQD 179
Query: 176 ISKQLES 182
+ Q+
Sbjct: 180 LFIQINR 186
>gi|300122800|emb|CBK23815.2| unnamed protein product [Blastocystis hominis]
Length = 195
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 113/194 (58%), Gaps = 5/194 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M +L+F +F+ + IIS F+ ++V N +Y+V LI AF ++ + LL +++A++ +++Y
Sbjct: 1 MSNLYFNIFASIIIISVFMTISVNNAVYAVLFLILAFFSSMCILFLLNIDYLALMFILIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE---- 118
+GA+ + FLF++MML I I K F+ ++ +++ A F VF
Sbjct: 61 IGAITILFLFVVMMLKIKINEKNTTKFISFINIIICCLIVYNVLLNADIFNVFLNNDLVY 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR-QDIS 177
+ ++ +N++ +G+V++T Y + ++GF+LL+ MI AI+L R I+R Q +
Sbjct: 121 NDWFSKLYYVDNIKMLGQVIFTNYYFYFILAGFVLLIGMISAILLSKESTRVIRRYQLVY 180
Query: 178 KQLESNPDNSIVMV 191
+Q+ + N++ +V
Sbjct: 181 QQISRDVSNAVFLV 194
>gi|223937085|ref|ZP_03628993.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [bacterium
Ellin514]
gi|223894366|gb|EEF60819.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [bacterium
Ellin514]
Length = 164
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 84/164 (51%), Gaps = 3/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FY+F+ + +I V+ RNPI S L+ + + AGLF+LL A F+ + ++VY
Sbjct: 1 MPEYLFYIFAALTLICGAFVIINRNPINSAMCLVLSIGSMAGLFVLLNAFFLGAVQVLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV+V FLF+IM+LD+ AE R++ G+ A + + S + +
Sbjct: 61 AGAVMVLFLFVIMLLDLK---AEERRRVNLFGAVTGVTSVAAIAFIFYKALAASKDQLPN 117
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+G L++ Y P EI +LL++M+G I+L +
Sbjct: 118 VTDRAVGGTVELGTKLFSDYLLPFEILSILLLVAMVGVILLSKK 161
>gi|196039591|ref|ZP_03106896.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus
NVH0597-99]
gi|196029751|gb|EDX68353.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus
NVH0597-99]
Length = 174
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + ++
Sbjct: 1 MNGEFIAFFILSLFAIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ + E R FF + ++ A N + F+ E
Sbjct: 61 LYSGAITIIMIFGIMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANEST 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L N IG +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 120 QGSLPLHEKNTLQIGTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 169
>gi|206970330|ref|ZP_03231283.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus AH1134]
gi|206734907|gb|EDZ52076.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus AH1134]
Length = 174
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 91/170 (53%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + ++
Sbjct: 1 MNGEFVAFFILSLSAIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ + E R FF + ++ A N + F+ E
Sbjct: 61 LYSGAITIIMIFGIMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNVGFANEST 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L NN IG +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 120 QGSLPLHENNTLQIGTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 169
>gi|238763934|ref|ZP_04624891.1| NADH-quinone oxidoreductase subunit J [Yersinia kristensenii ATCC
33638]
gi|238697902|gb|EEP90662.1| NADH-quinone oxidoreductase subunit J [Yersinia kristensenii ATCC
33638]
Length = 183
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R G+LA L+ + +
Sbjct: 62 AIMVLFVFVVMMLNLGNVEQQERDWLKPSLWIGPGLLALVLLSVLIYAIS---SLTHQGI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 TGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|133900408|gb|ABO41370.1| NADH dehydrogenase subunit 6 [Carpotroche longifolia]
gi|133900446|gb|ABO41389.1| NADH dehydrogenase subunit 6 [Erythrospermum phytolaccoides]
Length = 181
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDIFRRNAIDF 179
>gi|257852572|gb|ACV71298.1| NADH dehydrogenase subunit 6 [Pangium edule]
Length = 181
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 13/178 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + +
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKIRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESN 183
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDIFRRNAID 178
>gi|133900400|gb|ABO41366.1| NADH dehydrogenase subunit 6 [Bruguiera gymnorhiza]
Length = 179
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLFLGLDFSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTYMRYTVYAVKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQ+I ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQNIFRRNAIDF 177
>gi|218673002|ref|ZP_03522671.1| probable NADH-ubiquinone oxidoreductase protein, chain J [Rhizobium
etli GR56]
Length = 166
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FF LF+ +++I++ VV RNP++S +L+ F+N + +F+LL A F+A+I + VY
Sbjct: 1 MDQGFFLLFAAVSVITALTVVLARNPVHSALALMACFLNISAIFVLLEAPFLAVIQIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF+IMM+D+ V + G L + + + + +
Sbjct: 61 VGAIMVLFLFVIMMIDVREAVLQRFLPGGNLSAL-VLVGLLGVEMLVLVLWSNRFSVIEP 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ G+ + + L+ Y P EI+ ILL ++IGAIVL + +
Sbjct: 120 VAMRGGDQIRQLSTTLFADYLLPFEIASVILLAALIGAIVLARKEQE 166
>gi|30265317|ref|NP_847694.1| NADH dehydrogenase subunit J [Bacillus anthracis str. Ames]
gi|47530855|ref|YP_022204.1| NADH dehydrogenase subunit J [Bacillus anthracis str. 'Ames
Ancestor']
gi|49188130|ref|YP_031383.1| NADH dehydrogenase subunit J [Bacillus anthracis str. Sterne]
gi|49481260|ref|YP_039285.1| NADH dehydrogenase subunit J [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52140267|ref|YP_086563.1| NADH dehydrogenase subunit J [Bacillus cereus E33L]
gi|65317270|ref|ZP_00390229.1| COG0839: NADH:ubiquinone oxidoreductase subunit 6 (chain J)
[Bacillus anthracis str. A2012]
gi|165870029|ref|ZP_02214686.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0488]
gi|167636384|ref|ZP_02394684.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0442]
gi|167641713|ref|ZP_02399957.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0193]
gi|170689349|ref|ZP_02880543.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0465]
gi|170708833|ref|ZP_02899268.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0389]
gi|177654088|ref|ZP_02936098.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0174]
gi|190567786|ref|ZP_03020698.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis
Tsiankovskii-I]
gi|196036274|ref|ZP_03103672.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus W]
gi|218906471|ref|YP_002454305.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus AH820]
gi|227818057|ref|YP_002818066.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
CDC 684]
gi|229602758|ref|YP_002869509.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0248]
gi|254686283|ref|ZP_05150142.1| NADH dehydrogenase subunit J [Bacillus anthracis str. CNEVA-9066]
gi|254724279|ref|ZP_05186063.1| NADH dehydrogenase subunit J [Bacillus anthracis str. A1055]
gi|254735222|ref|ZP_05192931.1| NADH dehydrogenase subunit J [Bacillus anthracis str. Western North
America USA6153]
gi|254744426|ref|ZP_05202106.1| NADH dehydrogenase subunit J [Bacillus anthracis str. Kruger B]
gi|254755730|ref|ZP_05207763.1| NADH dehydrogenase subunit J [Bacillus anthracis str. Vollum]
gi|254759537|ref|ZP_05211562.1| NADH dehydrogenase subunit J [Bacillus anthracis str. Australia 94]
gi|30259995|gb|AAP29180.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
Ames]
gi|47506003|gb|AAT34679.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
'Ames Ancestor']
gi|49182057|gb|AAT57433.1| NADH dehydrogenase I, J subunit [Bacillus anthracis str. Sterne]
gi|49332816|gb|AAT63462.1| NADH dehydrogenase I, subunit J (NADH-quinone oxidoreductase, chain
J) [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|51973736|gb|AAU15286.1| NADH dehydrogenase I, subunit J (NADH-quinone oxidoreductase, chain
J) [Bacillus cereus E33L]
gi|164714352|gb|EDR19872.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0488]
gi|167510338|gb|EDR85740.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0193]
gi|167528218|gb|EDR91000.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0442]
gi|170126233|gb|EDS95125.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0389]
gi|170666717|gb|EDT17486.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0465]
gi|172080971|gb|EDT66050.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0174]
gi|190561202|gb|EDV15175.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis
Tsiankovskii-I]
gi|195991066|gb|EDX55036.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus W]
gi|218535828|gb|ACK88226.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus cereus AH820]
gi|227005897|gb|ACP15640.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
CDC 684]
gi|229267166|gb|ACQ48803.1| NADH dehydrogenase (ubiquinone), J subunit [Bacillus anthracis str.
A0248]
Length = 174
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + ++
Sbjct: 1 MNGEFIAFFILSLSAIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ + E R FF + ++ A N + F+ E
Sbjct: 61 LYSGAITIIMIFGIMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANESA 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L N IG +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 120 QGSLPLHEKNTLQIGTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 169
>gi|133900480|gb|ABO41406.1| NADH dehydrogenase subunit 6 [Kiggelaria africana]
Length = 181
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + +
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKIRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDIFRRNAIDF 179
>gi|93005411|ref|YP_579848.1| NADH dehydrogenase (quinone) [Psychrobacter cryohalolentis K5]
gi|92393089|gb|ABE74364.1| NADH dehydrogenase (quinone) [Psychrobacter cryohalolentis K5]
Length = 247
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 78/140 (55%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY + +AI +S VVT NP++++ S+I + + AG+F ++GA F + +VVY GA++
Sbjct: 13 FYSLAAVAIFASLRVVTQANPVHAILSMIVSLLAIAGIFFVIGAPFAGALEIVVYAGAIM 72
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F+F+IMML++ + E ++ G++ I +I M+ E + +
Sbjct: 73 VLFVFVIMMLNLGMRNDEREERWLDAGTWAIPTGLTIIIAVVLYAMIGLNHNEAALIGGT 132
Query: 128 GNNVENIGKVLYTQYAYPLE 147
+ + +G VL+T+Y +E
Sbjct: 133 TISAKAVGTVLFTKYIMLIE 152
>gi|317492615|ref|ZP_07951042.1| NADH-ubiquinone/plastoquinone oxidoreductase [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316919365|gb|EFV40697.1| NADH-ubiquinone/plastoquinone oxidoreductase [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 192
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V++ NP++++ LI + + A +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVISHTNPVHALLYLIVSLLAVAAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + + L + +++ + + +
Sbjct: 62 AIMVLFVFVVMMLNLGNSVVEQERAWLKPSLWIGPSLLSLILLAVLVYAI--MSVNDQGI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E+ +LL ++ A + H++
Sbjct: 120 SGDMIDAKAVGIALFGPYVLAVELVSMLLLAGLVVAFHIGREHKQG 165
>gi|50121943|ref|YP_051110.1| NADH dehydrogenase subunit J [Pectobacterium atrosepticum SCRI1043]
gi|49612469|emb|CAG75919.1| NADH-quinone oxidoreductase chain J [Pectobacterium atrosepticum
SCRI1043]
Length = 187
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY +AI+++ V+T NP++++ ++ + + AG+F LGA F ++++VY G
Sbjct: 2 EFAFYTTGLIAILATLRVITHTNPVHALLYMVTSLMAIAGVFFSLGANFAGALSIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + + + + ++ + S + + +
Sbjct: 62 AIMVLFVFVVMMLNLGSSVEEQERNWLKPSVWIGPSILSLALLVIVVNAILSLKDQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL ++ A + +R
Sbjct: 120 TGTPVEAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREDKRG 165
>gi|323702658|ref|ZP_08114319.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfotomaculum nigrificans DSM 574]
gi|323532321|gb|EGB22199.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfotomaculum nigrificans DSM 574]
Length = 172
Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F L S + + S+ LVVT++N ++SV LI F+ AG+FL+L A+FVA + ++V
Sbjct: 4 IYSLIAFVLLSGVVLGSALLVVTLKNLVHSVLWLIVTFIGTAGVFLMLEADFVAAVQVLV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV + +F +M++ + F I ++ + A+
Sbjct: 64 YAGAVCIMVVFGVMLVQRNEMGNSNPFNYRFR----IAAPVVGVLFIIIGLLTAKAQWVT 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
S V+ + +L + P E++ +L +++ GA+VL+ R
Sbjct: 120 SGAGVPKKTVQALAPILLGDFMIPFEVAAILLTVALTGALVLVKEVR 166
>gi|332162381|ref|YP_004298958.1| NADH dehydrogenase subunit J [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666611|gb|ADZ43255.1| NADH dehydrogenase subunit J [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860326|emb|CBX70639.1| NADH-quinone oxidoreductase subunit J [Yersinia enterocolitica
W22703]
Length = 181
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R G+LA L+ + S +
Sbjct: 62 AIMVLFVFVVMMLNLGNVEQQERDWLKPSLWIGPGLLALVLLTVLIYAIS---SVTDSGI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|238798412|ref|ZP_04641893.1| NADH-quinone oxidoreductase subunit J [Yersinia mollaretii ATCC
43969]
gi|238717726|gb|EEQ09561.1| NADH-quinone oxidoreductase subunit J [Yersinia mollaretii ATCC
43969]
Length = 181
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R G+LA L+ + S +
Sbjct: 62 AIMVLFVFVVMMLNLGNVEQQERDWLKPTLWIGPGLLALVLLSVLIYAIS---SVTDSGI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|56791574|gb|AAW30325.1| NADH dehydrogenase subunit 6 [Platanus occidentalis]
Length = 177
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +NP++SV I F + +GL LLLG +F AMI+ VV++GA+ V
Sbjct: 1 VLSSPALVSGLMVARAKNPVHSVSFPIPVFRDTSGLLLLLGLDFSAMISPVVHIGAIAVS 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM I I R S IG++ +
Sbjct: 61 FLFVVMMFHIQIAETHEEVLRYLPVSGIIGLILWWEMFFIFFNETIPLLPTQRNTTSLRY 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ V N+E +G +LYT Y + ILL++MIGAIVL + +KRQD
Sbjct: 121 TVHAGKVRSWTNLETLGNLLYTYYGVWFLVPSPILLVAMIGAIVLTMHRTTKVKRQD 177
>gi|46202538|ref|ZP_00208558.1| COG0839: NADH:ubiquinone oxidoreductase subunit 6 (chain J)
[Magnetospirillum magnetotacticum MS-1]
Length = 159
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/160 (35%), Positives = 96/160 (60%), Gaps = 6/160 (3%)
Query: 45 LFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAE 104
+FLLLGAEF+AM+ ++VYVGAV V FLF++MMLDI++ + + I ++
Sbjct: 1 MFLLLGAEFLAMVLVIVYVGAVAVLFLFVVMMLDINMVELKEGFLQYLPTGALIAVVLLV 60
Query: 105 LIVCASNFMVFSAEGE-----LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
++ F+ + E + + + +N +GK++YT Y Y + SG +LL++MIG
Sbjct: 61 ELLAMFGGWAFAPDVEAMIKAPTPTLDQASNTVALGKLIYTNYVYLFQASGLVLLVAMIG 120
Query: 160 AIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKSGKGI 199
I+L R R +++Q I+ Q+ + +S+ + KV+SG+GI
Sbjct: 121 TILLTHRKRTGVRKQIIADQVGRSR-DSVELKKVQSGRGI 159
>gi|332669458|ref|YP_004452466.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Cellulomonas
fimi ATCC 484]
gi|332338496|gb|AEE45079.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Cellulomonas
fimi ATCC 484]
Length = 325
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 83/167 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ + + ++++ ++ R +++ +++ ++ A L++ A F+ ++ +VV
Sbjct: 24 TGETVLFWVLAPIMVLAALGLLFARKAVHAALAVVVVMISLAFLYVAQDAVFLGVVQVVV 83
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV++ FLF++M++ +D + RG + + +++ +
Sbjct: 84 YTGAVMMLFLFVLMLVGVDASDSLVETIRGQRWIGALAGIGLGVVLAGVVGRAAYGPSQG 143
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ +N I +++ +Y E+ G +L+ + +GA+V R R
Sbjct: 144 LDSANEASNPVAIAHLVFGEYVLAFEVVGALLVTAALGALVYTHRTR 190
>gi|197259884|ref|YP_002149679.1| NADH dehydrogenase subunit 6 [Madracis mirabilis]
gi|169809232|gb|ACA84070.1| NADH dehydrogenase subunit 6 [Madracis mirabilis]
Length = 187
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 8/186 (4%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
F + F I S +VV+ NP+ S+F L+ F+N+A FLLLG +F+A++ L++YVG
Sbjct: 2 EFFSFFFILGIIGSGVMVVSALNPVLSIFWLVLVFINSAVFFLLLGIDFLALMFLLIYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI--------VCASNFMVFS 116
A+ + FLF+IM+L++ +++ IG + + +F V +
Sbjct: 62 AIAILFLFVIMLLNLTDYPPVLKREVDMTNYIPIGFIIGIFFFSEIASSGLLLGSFQVEN 121
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + +N+E +G VLY ++ FILL++MIG IVL K+QD+
Sbjct: 122 WDLSFPWFLISYHNIEALGHVLYVSCFCLFLLASFILLVAMIGVIVLTQETEPLSKKQDL 181
Query: 177 SKQLES 182
Q+
Sbjct: 182 FFQINR 187
>gi|238751240|ref|ZP_04612734.1| NADH-quinone oxidoreductase subunit J [Yersinia rohdei ATCC 43380]
gi|238710514|gb|EEQ02738.1| NADH-quinone oxidoreductase subunit J [Yersinia rohdei ATCC 43380]
Length = 181
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R+ G+LA L+ + S +
Sbjct: 62 AIMVLFVFVVMMLNLGKVEEQEREWLKPSVWIGPGLLALVLLSVLIYAIS---SVTDSGI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|315654706|ref|ZP_07907612.1| NADH-quinone oxidoreductase subunit J [Mobiluncus curtisii ATCC
51333]
gi|315491170|gb|EFU80789.1| NADH-quinone oxidoreductase subunit J [Mobiluncus curtisii ATCC
51333]
Length = 324
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q++F S +A+I++ V +++ ++ V AG++ +GAEF+ + +VV
Sbjct: 16 TGQTIFVAACSALALIAALGVALSNRAVHAAVYMVAMMVCVAGIYFSVGAEFLGAVQIVV 75
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ FLF+IM++ + + K G + + + ++A ++ V +
Sbjct: 76 YTGAIMMMFLFVIMLVGVQAVDSPRDSKVGTVAAAVLLVVAFGIMAIV--AAVNTTVNGA 133
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
N + + Y PLE+ +L+++ +GA+ L
Sbjct: 134 PARPSGDPNPVRLASEVINTYYAPLEMVATLLIVAAVGAMSLTHSE 179
>gi|34556908|ref|NP_906723.1| NADH dehydrogenase subunit J [Wolinella succinogenes DSM 1740]
gi|34482623|emb|CAE09623.1| NADH OXIDOREDUCTASE I [Wolinella succinogenes]
Length = 190
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 7/193 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FYLF+ ++ +VVT N ++++ +L + + F +LGAEF+ + ++V
Sbjct: 1 MFETIAFYLFAALSASMFLIVVTTNNVLHALSALAAGMIFISAFFFMLGAEFLGVAQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D + E + R ++ IGI+ L+V + +
Sbjct: 61 YTGAVMALYAFGMMFFDSSKAIKEKEENR-WVLWVLIGIVTLLLLVILGAPFIHLSLDAR 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ N E IG VL+TQY P E++ +LL++MI IVL K+ D S L
Sbjct: 120 HPIPEGVGNTEAIGYVLFTQYLVPFELAAVMLLVAMIAGIVLA------GKKMDQSLTLM 173
Query: 182 SNPDNSIVMVKVK 194
S+ + I++ K K
Sbjct: 174 SDEEAEILLKKTK 186
>gi|261820800|ref|YP_003258906.1| NADH dehydrogenase subunit J [Pectobacterium wasabiae WPP163]
gi|261604813|gb|ACX87299.1| NADH dehydrogenase (quinone) [Pectobacterium wasabiae WPP163]
Length = 186
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY +AI+++ V+T NP++++ ++ + + AG+F LGA F ++++VY G
Sbjct: 2 EFAFYTTGLIAILATLRVITHTNPVHALLYMVTSLMAIAGVFFSLGANFAGALSIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + + + + ++ + S + + +
Sbjct: 62 AIMVLFVFVVMMLNLGNSVEEQERNWLKPSVWIGPSILSLALLVIVVNAILSLKEQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL ++ A + +R
Sbjct: 120 TGTPVEAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREDKRG 165
>gi|293395178|ref|ZP_06639464.1| NADH dehydrogenase I subunit J [Serratia odorifera DSM 4582]
gi|291422355|gb|EFE95598.1| NADH dehydrogenase I subunit J [Serratia odorifera DSM 4582]
Length = 186
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FYL +AI+++ V++ NP++++ LI + + + +F LGA F A + ++VY G
Sbjct: 2 EIAFYLAGLIAILATIRVISHTNPVHALLYLIVSLLAISAVFFSLGAYFAAALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V + ++ + ++ +V +
Sbjct: 62 AIMVLFVFVVMMLNLGNAVQQQEREWLKPSLWIG--PGLLSLILLVVLIVAIRSVSDQGI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 120 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 165
>gi|238788646|ref|ZP_04632438.1| NADH-quinone oxidoreductase subunit J [Yersinia frederiksenii ATCC
33641]
gi|238723241|gb|EEQ14889.1| NADH-quinone oxidoreductase subunit J [Yersinia frederiksenii ATCC
33641]
Length = 181
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R G+LA L+ + S +
Sbjct: 62 AIMVLFVFVVMMLNLGNVEQQERDWLKPSLWIGPGLLALVLLSVLIYAIS---SVTDSGI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|163942982|ref|YP_001647866.1| NADH dehydrogenase subunit J [Bacillus weihenstephanensis KBAB4]
gi|163865179|gb|ABY46238.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacillus
weihenstephanensis KBAB4]
Length = 174
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 1/166 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + ++
Sbjct: 1 MNGEFVAFFILSLSAIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ + E R FF + ++ A N + FS +
Sbjct: 61 LYSGAITIIMIFGIMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNSIDFSNQST 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
L NN IG +LY++Y P E++ ILL++++GAI+L +
Sbjct: 120 QGSLPLHENNTLQIGTLLYSKYIIPFELTSVILLVALVGAIILAKK 165
>gi|282860767|ref|ZP_06269833.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
sp. ACTE]
gi|282564503|gb|EFB70039.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
sp. ACTE]
Length = 251
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ + VT + +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 19 EIAFLLVGIATLGAAVVTVTTKQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 78
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+++V LF +M+ I + + + + +A +V + +L
Sbjct: 79 SIVVLLLFGLMLTRAPIGRSPDADSGNRWVALGVAVASAGALVWVVVDAFRATWIDLDGP 138
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+V G L+ + P E +LL +++GAIVL + +D K
Sbjct: 139 AQGSTDVT--GAFLFRNWVLPFEALSVLLLAALVGAIVLSRKADKDGK 184
>gi|85059571|ref|YP_455273.1| NADH dehydrogenase subunit J [Sodalis glossinidius str.
'morsitans']
gi|84780091|dbj|BAE74868.1| NADH dehydrogenase I subunit J [Sodalis glossinidius str.
'morsitans']
Length = 187
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 80/167 (47%), Gaps = 2/167 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L FYL +A++++ V+T P++++ LI + + A +F LGA F + ++VY G
Sbjct: 2 ELAFYLSGLVAVLATLRVITHTQPVHALLYLIISLLAIACVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + ++ L + +++ + +
Sbjct: 62 AIMVLFVFVVMMLNMSVGRDKQECAWLRPRAWIGPALMSLVLLAILVRALVG--AGDHGI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ +G L+ Y +E++ +LL ++ A L R ++
Sbjct: 120 AGDLIAAKTVGIALFGPYVLAVELASMLLLAGLVVAFHLGRDERDNV 166
>gi|133900562|gb|ABO41447.1| NADH dehydrogenase subunit 6 [Trichadenia zeylanica]
Length = 180
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + +
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKIRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDIFRRNAIDF 179
>gi|238784992|ref|ZP_04628990.1| NADH-quinone oxidoreductase subunit J [Yersinia bercovieri ATCC
43970]
gi|238714108|gb|EEQ06122.1| NADH-quinone oxidoreductase subunit J [Yersinia bercovieri ATCC
43970]
Length = 181
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R G+LA L+ + S +
Sbjct: 62 AIMVLFVFVVMMLNLGNVEQQERDWLKPTLWIGPGLLALVLLSVLIYAIS---SVTDSGI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|133900378|gb|ABO41355.1| NADH dehydrogenase subunit 6 [Acharia tragodes]
Length = 181
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + +
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLILWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKIRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTSHSAVKRQDIFRRNAIDF 179
>gi|123441684|ref|YP_001005668.1| NADH dehydrogenase subunit J [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088645|emb|CAL11442.1| NADH dehydrogenase I chain J [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318606460|emb|CBY27958.1| NADH-ubiquinone oxidoreductase chain J [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 181
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R G+LA L+ + S +
Sbjct: 62 AIMVLFVFVVMMLNLGNVEQQERDWLKPSLWIGPGLLALVLLTVLIYAIS---SVTDSGI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|238794599|ref|ZP_04638206.1| NADH-quinone oxidoreductase subunit J [Yersinia intermedia ATCC
29909]
gi|238726085|gb|EEQ17632.1| NADH-quinone oxidoreductase subunit J [Yersinia intermedia ATCC
29909]
Length = 181
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R G+LA L+ + S +
Sbjct: 62 AIMVLFVFVVMMLNLGNVEQQERDWLKPSLWIGPGLLALVLLSVLIYAIS---SITDSGI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|238759970|ref|ZP_04621123.1| NADH-quinone oxidoreductase subunit J [Yersinia aldovae ATCC 35236]
gi|238701797|gb|EEP94361.1| NADH-quinone oxidoreductase subunit J [Yersinia aldovae ATCC 35236]
Length = 181
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R GILA +V S + + +
Sbjct: 62 AIMVLFVFVVMMLNLGNVEQQERDWLKPSLWIGPGILA---LVLLSVLIYAISSVSDQGI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|257852724|gb|ACV71374.1| NADH dehydrogenase subunit 6 [Afrostyrax sp. Cheek 5007]
Length = 180
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDIFRRNAIDF 179
>gi|47569789|ref|ZP_00240460.1| NADH-ubiquinone oxidoreductase, NQO10 subunit (NQO10), putative
[Bacillus cereus G9241]
gi|47553531|gb|EAL11911.1| NADH-ubiquinone oxidoreductase, NQO10 subunit (NQO10), putative
[Bacillus cereus G9241]
Length = 174
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 89/170 (52%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + ++
Sbjct: 1 MNGEFIAFFILSLSAIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ + E R FF + ++ A N + F+ E
Sbjct: 61 LYSGAITIIMIFGIMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANEST 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L N IG +LY++Y P E+ ILL++++GAI+L + ++
Sbjct: 120 QGSLPLHEKNTLQIGTLLYSKYIIPFELISVILLVALVGAIILAKKDEKE 169
>gi|257852672|gb|ACV71348.1| NADH dehydrogenase subunit 6 [Phyllanthus epiphyllanthus]
Length = 170
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/169 (32%), Positives = 80/169 (47%), Gaps = 11/169 (6%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM I I
Sbjct: 1 NPVHSVLFPILVFCDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFHIQIAEIHE 60
Query: 87 RKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFKGNNVENIG 135
R S IG++ + + V N+E +G
Sbjct: 61 EVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRSWTNLETLG 120
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
+LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 NLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAVDF 169
>gi|227112319|ref|ZP_03825975.1| NADH dehydrogenase subunit J [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227326158|ref|ZP_03830182.1| NADH dehydrogenase subunit J [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 186
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY +AI+++ V+T NP++++ ++ + + AG+F LGA F ++++VY G
Sbjct: 2 EFAFYTTGLIAILATLRVITHTNPVHALLYMVTSLMAIAGVFFSLGANFAGALSIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + + + + ++ + S + + +
Sbjct: 62 AIMVLFVFVVMMLNLGNSVEEQERNWLKPSVWIGPSILSLALLVIVVNAILSLKEQ--GI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL ++ A + +R
Sbjct: 120 TGTPVEAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREDKRG 165
>gi|56791552|gb|AAW30314.1| NADH dehydrogenase subunit 6 [Amborella trichopoda]
Length = 178
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
A++S +V +NP++SV I F + +GL LLLG +F AMI+ VV++GA+ V FLF++
Sbjct: 2 ALVSGLMVARAKNPVHSVSFPIPVFRDTSGLLLLLGLDFSAMISPVVHIGAIAVSFLFVV 61
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSR 123
MM +I I R S IG++ + + +
Sbjct: 62 MMFNIQIAETHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRKTTSLRYTVYAG 121
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
V N E +G +LYT Y+ + ILL++MIGAIV + ++RQD+ ++
Sbjct: 122 KVRSWTNSETLGNLLYTYYSVWFLVPSPILLVAMIGAIVQTMHSTTKVQRQDVFRRN 178
>gi|311033313|ref|ZP_07711403.1| NADH dehydrogenase subunit J [Bacillus sp. m3-13]
Length = 179
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F + AI L++ + ++ V +L+F F++ AG++++L AEFVA + +++Y
Sbjct: 6 EFIAFLFLAIAAIAGGVLMLNLTKVVHMVVALVFTFISIAGIYVMLSAEFVAAVQILIYS 65
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GA+ + LF IM+ + E R L + AA + + + G
Sbjct: 66 GAITIIMLFGIMLTRHNDESETSGLGRKILVGAGVLGFAAVMYFGLYSLDL----GSQES 121
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
NN E IG +Y +Y P E++ ILL++++GAI+L R D
Sbjct: 122 ADLHVNNTEQIGVAIYAKYVIPFELTSVILLVALVGAIILARRDDEDT 169
>gi|294637171|ref|ZP_06715479.1| NADH-quinone oxidoreductase, J subunit [Edwardsiella tarda ATCC
23685]
gi|291089635|gb|EFE22196.1| NADH-quinone oxidoreductase, J subunit [Edwardsiella tarda ATCC
23685]
Length = 190
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + A +F LGA F + ++VY G
Sbjct: 2 EFAFYVAALVAVLATIRVITHTNPVHALLYLIVSLLAVAAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + G + + L++ + + + +G +
Sbjct: 62 AIMVLFVFVVMMLNLGNSVVEQERAWLRPGVWIGPSVLTLLLLLVVLYAISTLQG--GAI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E+ +LL ++ A + H +
Sbjct: 120 SGQVVDAKAVGIALFGPYVLAVELVSMLLLAGLVVAFHIGREHHQG 165
>gi|237751589|ref|ZP_04582069.1| NADH oxidoreductase I [Helicobacter bilis ATCC 43879]
gi|229372955|gb|EEO23346.1| NADH oxidoreductase I [Helicobacter bilis ATCC 43879]
Length = 203
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY+F + + + +VV N +Y++ +L F + +GLF LL A+F+ ++ ++V
Sbjct: 1 MFEAIAFYVFGALCLCAFLIVVMTNNILYALTALAFGMILVSGLFFLLNADFLGVVQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+V + F +M+ D+ EV E + + + + + A ++ +
Sbjct: 61 YTGAVVVMYAFGMMLFDVSKEVKERFQNQFM--------VWLLVSIFAIGLLIVVGNTQT 112
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ N+ + +L+ Y E + +LL++MI I +
Sbjct: 113 TIPYQNDNSTNALAHLLFKDYLVCFEAAAIMLLMAMIAGIGVGSHK 158
>gi|71065159|ref|YP_263886.1| NADH dehydrogenase I, J subunit [Psychrobacter arcticus 273-4]
gi|71038144|gb|AAZ18452.1| probable NADH dehydrogenase I, J subunit [Psychrobacter arcticus
273-4]
Length = 239
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 78/140 (55%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY + +AI +S VVT NP++++ S+I + + AG+F ++GA F + +VVY GA++
Sbjct: 13 FYSLAAVAIFASLRVVTQANPVHAILSMIVSLLAIAGIFFVIGAPFAGALEIVVYAGAIM 72
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F+F+IMML++ + E ++ G++ I +I M+ E + +
Sbjct: 73 VLFVFVIMMLNLGMRNDEREERWLDAGTWAIPTGLTIIIAVVLYAMIGLNHNEAAVIGGS 132
Query: 128 GNNVENIGKVLYTQYAYPLE 147
+ + +G VL+T+Y +E
Sbjct: 133 TISAKAVGTVLFTKYIMLIE 152
>gi|56791556|gb|AAW30316.1| NADH dehydrogenase subunit 6 [Calycanthus floridus]
Length = 178
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 87/178 (48%), Gaps = 11/178 (6%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
S A++S +VV +NP++ V I F + +GL LLLG +F AMI+LVV++GA+ F
Sbjct: 1 LSSPALVSGLMVVRAKNPVHPVSFPIPVFRDTSGLLLLLGLDFSAMISLVVHIGAIAASF 60
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEG 119
LF++MM I I R S IG++ +
Sbjct: 61 LFVVMMFHIQIAETHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLRYT 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ V N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+
Sbjct: 121 VHAGKVRSWTNLETLGNLLYTYYSVRFLVPSPILLVAMIGAIVLTMHRTTKVKRQDVF 178
>gi|149280561|ref|ZP_01886677.1| NADH dehydrogenase I chain J [Pedobacter sp. BAL39]
gi|149228676|gb|EDM34079.1| NADH dehydrogenase I chain J [Pedobacter sp. BAL39]
Length = 165
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 88/166 (53%), Gaps = 2/166 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY + + +I S +VV +NP++SV LI F ++LL A+F+A++ +VY
Sbjct: 1 MGTSVFYFVATLTVIFSLMVVFAKNPVHSVLYLIVTFFTLTVHYILLNAQFLAVVNFIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+GA++V FLF++M+L+++ + + + G ++ + + +
Sbjct: 61 MGAIMVLFLFVLMLLNLNKDNEPLKSTLVKVVGVVAG--CCLVVTIVGSLKATAISDPVV 118
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
V+N+GK L+ Y P E+S +LL +M+GA++L + +
Sbjct: 119 LRNPNLGLVKNLGKELFGPYMLPFELSSILLLTAMVGAVLLTKKEK 164
>gi|257852684|gb|ACV71354.1| NADH dehydrogenase subunit 6 [Cassipourea lanceolata]
Length = 178
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 82/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLFLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|71733150|ref|YP_271954.1| NADH dehydrogenase subunit 6 [Montastraea faveolata]
gi|71733164|ref|YP_271941.1| NADH dehydrogenase subunit 6 [Montastraea franksi]
gi|71733178|ref|YP_271928.1| NADH dehydrogenase subunit 6 [Montastraea annularis]
gi|71043518|dbj|BAE16181.1| NADH dehydrogenase subunit 6 [Montastraea annularis]
gi|71043532|dbj|BAE16194.1| NADH dehydrogenase subunit 6 [Montastraea annularis]
gi|71043546|dbj|BAE16207.1| NADH dehydrogenase subunit 6 [Montastraea franksi]
gi|71043560|dbj|BAE16220.1| NADH dehydrogenase subunit 6 [Montastraea franksi]
gi|71043574|dbj|BAE16233.1| NADH dehydrogenase subunit 6 [Montastraea faveolata]
gi|71043588|dbj|BAE16246.1| NADH dehydrogenase subunit 6 [Montastraea faveolata]
Length = 186
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M++L F F I+S +VV+ NP+ S+F L+ FVN+A FL L +F+A++ L+VY
Sbjct: 1 MEALIFCFF-LSTIVSGIMVVSALNPVLSIFWLVLVFVNSAVFFLWLEVDFLALMFLLVY 59
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------ 116
VGA+ V FLF++M+L++ R++ +G L
Sbjct: 60 VGAIAVLFLFVVMLLNLTDYPPVFREEVDMTNYMPVGFLIGGFFFSEIASSWSIIFPRVE 119
Query: 117 -AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + +N+E +G+VLY ++GF LL++M+G IVL K+QD
Sbjct: 120 SWDLSFPWFLVSYHNIEALGQVLYISCFCLFFLAGFALLVAMVGVIVLTQELEPLTKKQD 179
Query: 176 ISKQLES 182
+ Q+
Sbjct: 180 LFIQINR 186
>gi|257852732|gb|ACV71378.1| NADH dehydrogenase subunit 6 [Cucumis sativus]
Length = 180
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 59/179 (32%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPIPVFRNTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ I + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEIFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLLSSLILLVAMIGAIVLTMHRTTHSAVKRQDVFRRNALDF 179
>gi|320532479|ref|ZP_08033302.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Actinomyces
sp. oral taxon 171 str. F0337]
gi|320135309|gb|EFW27434.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Actinomyces
sp. oral taxon 171 str. F0337]
Length = 292
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 72/169 (42%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F + + + + V+T + + + ++I ++ A L+++ + F+ + +VVY
Sbjct: 27 EAIVFGVVALVTVACGIGVLTAKRAVNAAINMIGIMISLAVLYIVNESPFMGITQVVVYT 86
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV+ LF+IM++ + + I + + + +
Sbjct: 87 GAVMTLVLFVIMLVGVGGDEPVGAAGTVMRRPVLILLGLGLAGALTAVVWRSTLPTPVGL 146
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + LY + +E++ +L+++ +GA+ L R R +
Sbjct: 147 KNGAKAAPDLLAVTLYHDHVVTMELTAILLIVAAVGALTLTHRQRIRAR 195
>gi|257852668|gb|ACV71346.1| NADH dehydrogenase subunit 6 [Heywoodia lucens]
Length = 180
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFCDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDVFRRNAIDF 179
>gi|322831992|ref|YP_004212019.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Rahnella sp.
Y9602]
gi|321167193|gb|ADW72892.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Rahnella sp.
Y9602]
Length = 186
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 82/166 (49%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + A +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVLATLRVITHTNPVHALLYLIVSLLAIAAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R +L+ L+V ++ + +
Sbjct: 62 AIMVLFVFVVMMLNLGNVQEQERAWLKPATWIGPSVLSVILLVVMIMSILGLHDH---GI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 KGDMVDAKAVGIALFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|257852628|gb|ACV71326.1| NADH dehydrogenase subunit 6 [Trigonostemon verrucosus]
Length = 180
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR--DIKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGTVKRQDIFRRNAIDF 179
>gi|157371537|ref|YP_001479526.1| NADH dehydrogenase subunit J [Serratia proteamaculans 568]
gi|157323301|gb|ABV42398.1| NADH dehydrogenase (quinone) [Serratia proteamaculans 568]
Length = 186
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FYL F+A+I++ V++ NP++++ LI + + + +F LGA F A + ++VY G
Sbjct: 2 EIAFYLAGFIAVIATIRVISHTNPVHALLYLIVSLLAISAVFFSLGAYFAAALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V + + + + + ++ +V +
Sbjct: 62 AIMVLFVFVVMMLNLGNAVQQQERDWLKPSVWIGPGILSLALLVVL--IVAIRSVSDQGI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 120 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 165
>gi|95928437|ref|ZP_01311185.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Desulfuromonas acetoxidans DSM 684]
gi|95135708|gb|EAT17359.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Desulfuromonas acetoxidans DSM 684]
Length = 170
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/167 (31%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q FFYL +F+A++S F V++ +NPI S SL+ F A +++L A F+A + ++V
Sbjct: 3 LLQLFFFYLVAFVAVVSGFCVISCKNPINSAISLVMTFFCLAIFYVMLHAPFMAAVQIMV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA++V +F++M+L+ EV + F ++ +++V + V G +
Sbjct: 63 YAGAIMVLIIFVMMLLNQGSEVIARYRHAVTGAFIFAIVMLVQIVVILKDGGVSGPVGPI 122
Query: 122 S-RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +V +VE IGK ++T + P EI+ +LL++++GA+VL R
Sbjct: 123 NGDVVQSVGHVELIGKAMFTDFLLPFEIASILLLVAIVGAVVLAKRE 169
>gi|133900510|gb|ABO41421.1| NADH dehydrogenase subunit 6 [Monotaxis megacarpa]
Length = 181
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDLFRRNAMDF 179
>gi|257852686|gb|ACV71355.1| NADH dehydrogenase subunit 6 [Paradrypetes subintegrifolia]
Length = 178
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLFLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y +S ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDIFRRNAIDF 177
>gi|133900452|gb|ABO41392.1| NADH dehydrogenase subunit 6 [Euphronia guianensis]
Length = 181
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDIFRRNAIDF 179
>gi|257852726|gb|ACV71375.1| NADH dehydrogenase subunit 6 [Hua gabonii]
Length = 180
Score = 91.6 bits (226), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTIHRTTHGAVKRQDVFRRNAIDF 179
>gi|197285612|ref|YP_002151484.1| NADH dehydrogenase subunit J [Proteus mirabilis HI4320]
gi|227356115|ref|ZP_03840505.1| NADH-quinone oxidoreductase chain J [Proteus mirabilis ATCC 29906]
gi|194683099|emb|CAR43656.1| NADH-quinone oxidoreductase chain J [Proteus mirabilis HI4320]
gi|227163760|gb|EEI48672.1| NADH-quinone oxidoreductase chain J [Proteus mirabilis ATCC 29906]
Length = 177
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ ++I+++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAGLISILATLRVITHTNPVHALLYLIVSLIGLSVVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E +K + + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGKSVVEQERKWLQPRFWIGPAILSLVLLIVLVYAI--SSVTHGEI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL +I A + D
Sbjct: 120 SGEIIGAKEVGISLFGPYILAVELASVLLLSGLIVAYHIGRDQSHD 165
>gi|327403953|ref|YP_004344791.1| NADH dehydrogenase subunit J [Fluviicola taffensis DSM 16823]
gi|327319461|gb|AEA43953.1| NADH dehydrogenase subunit J [Fluviicola taffensis DSM 16823]
Length = 170
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 94/165 (56%), Gaps = 1/165 (0%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+ + I ++ +VV ++P+ SV L+ F + ++L+ A+F+A++ ++VY GA+
Sbjct: 6 IFYILGGLTIGTALMVVLSKHPVRSVLYLVLTFFLISANYVLMNAQFIAIVNIIVYAGAI 65
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V FLF++M+L+++ E +G+ G ++V A + + +
Sbjct: 66 MVLFLFVLMLLNLNKENEPKHSPMMTIGAAVAGGSLFLVVVAAMRDAILATPMIDAN-SE 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
K VEN+G++L+T+Y P E+S + L +M+GA++L + ++ I
Sbjct: 125 KVGLVENLGQILFTKYVLPFEVSSVLFLAAMVGAVLLAKKEKQTI 169
>gi|152977481|ref|YP_001376998.1| NADH dehydrogenase subunit J [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152026233|gb|ABS24003.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacillus
cytotoxicus NVH 391-98]
Length = 174
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ SF A++ ++ V ++ + +L+F F++ AGL+ LL AEF+ + ++
Sbjct: 1 MTGELIAFFILSFTAVMGGVFMLNVTKVMHMMLALVFTFLSIAGLYFLLAAEFIGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + +F IM+ D E R + F +L ++ A + + F+ +
Sbjct: 61 IYSGAITIIMIFGIMLTRHDA-ENESRISLRKIIVFLAVMLFGTVMYFAVHNIDFANQNT 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L N IG +LY++Y P E++ ILL++++GAIVL +
Sbjct: 120 QDILPLHEQNTLQIGTLLYSKYVIPFELASVILLVALVGAIVLAKKDEEK 169
>gi|270262806|ref|ZP_06191077.1| NADH dehydrogenase subunit J [Serratia odorifera 4Rx13]
gi|270043490|gb|EFA16583.1| NADH dehydrogenase subunit J [Serratia odorifera 4Rx13]
Length = 186
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FYL +AI+++ V++ NP++++ LI + + + +F LGA F A + ++VY G
Sbjct: 2 EIAFYLAGLIAIVATIRVISHTNPVHALLYLIVSLLAISAVFFSLGAYFAAALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V + + + L + ++ +V +
Sbjct: 62 AIMVLFVFVVMMLNLGNAVQQQERDWLKPSVWIGPGLMSLALLVVL--IVAIRSLSDQGI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 120 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 165
>gi|295400700|ref|ZP_06810677.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
thermoglucosidasius C56-YS93]
gi|312112606|ref|YP_003990922.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
sp. Y4.1MC1]
gi|294977281|gb|EFG52882.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
thermoglucosidasius C56-YS93]
gi|311217707|gb|ADP76311.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacillus
sp. Y4.1MC1]
Length = 173
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + L F + AII L++ + ++ V +L+F F++ AGL++LL AEFVA + ++
Sbjct: 1 MSGEYLAFLTLALAAIIGGVLMLNLSKVVHMVTALVFTFISIAGLYVLLSAEFVAAVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + LF IM+ E E GF I A A V+ +
Sbjct: 61 IYSGAITIIMLFGIMLTRHREEDKENTTTGGFWRKTATAI-AVFAFGAAVYLGVYQLDFG 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
N E IG LY+ Y P EI+ ILL++++GAI+L + R+ ++
Sbjct: 120 EKAERLHEKNTEQIGVALYSHYIIPFEITAVILLVALVGAIILAKKDDREAQK 172
>gi|193215449|ref|YP_001996648.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Chloroherpeton thalassium ATCC 35110]
gi|193088926|gb|ACF14201.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Chloroherpeton thalassium ATCC 35110]
Length = 176
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 90/168 (53%), Gaps = 1/168 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ FF+ F + I + V +NP+ S L+ F GL+L L A+F+A++ ++
Sbjct: 1 MALEEFFFFFFGALVITGTLGTVLSKNPVSSALFLVLNFFALGGLYLSLEAQFIAVVQVI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG-SFFIGILAAELIVCASNFMVFSAEG 119
VY GA++V FLF IM+L ++ E + + G +F I + I+ F + +
Sbjct: 61 VYAGAIMVLFLFTIMLLSLEDESSLIERFDLKKGFAFLISGVFLVEILYIVGFKLTPVKP 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +V+ IGK L T+Y +P EI +LLL++IGA++L R
Sbjct: 121 VSRLTPVQIGDVKTIGKALLTEYVFPFEIISIVLLLAIIGAVLLAKRK 168
>gi|162456308|ref|YP_001618675.1| putative NADH dehydrogenase (ubiquinone) [Sorangium cellulosum 'So
ce 56']
gi|161166890|emb|CAN98195.1| putative NADH dehydrogenase (ubiquinone) [Sorangium cellulosum 'So
ce 56']
Length = 171
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +L F + + + S+ LV RN I+S +L+ F+ AGL++ L A+F+A ++V
Sbjct: 3 SLSALVFLGLAALTLGSAGLVAFSRNIIHSALALLGTFLGIAGLYVSLSADFIAATQVLV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVG +V LF +M+ E+ + G +F + L+ V +
Sbjct: 63 YVGGTLVLILFAVMLTSRIAEMKISNPRGGPAVAFGLVTAVLLLL-----GRVATQTPWP 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ + +G +Y P E+ +LL +MIGA+VL R
Sbjct: 118 AEAKPAMPSTAKLGHAFLGEYLLPFELGSVVLLAAMIGAVVLARR 162
>gi|328953784|ref|YP_004371118.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfobacca
acetoxidans DSM 11109]
gi|328454108|gb|AEB09937.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfobacca
acetoxidans DSM 11109]
Length = 165
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 1/162 (0%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F+L + A+IS +VV NP+ S L+ F AG++LL A+F+A + ++VY GA
Sbjct: 3 IIFFLLAATALISGIMVVIQVNPVRSALYLVLNFFALAGIYLLANAQFIAAVQIIVYAGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
++V FLF+IM+L++ E + LA + +
Sbjct: 63 IMVLFLFVIMLLNLRQ-PEEGGAQLHIGQKILGASLATGTAALVIYTITRLKLPPGKGMA 121
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
E + K L+T Y P E++ +LL++++GA++L
Sbjct: 122 ADFGTTEMVAKSLFTDYLLPFEVTSILLLVAVVGAVILAKTK 163
>gi|257852750|gb|ACV71387.1| NADH dehydrogenase subunit 6 [Calycanthus floridus]
Length = 178
Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++ V I F + +GL LLLG +F AMI+LVV++GA+ FLF++MM
Sbjct: 1 GLMVVRAKNPVHPVSFPIPVFRDTSGLLLLLGLDFSAMISLVVHIGAIAASFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAETHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLRYTVHAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVRFLVPSPILLVAMIGAIVLTMHRTTKVKRQDVFRRNAID 176
>gi|133900522|gb|ABO41427.1| NADH dehydrogenase subunit 6 [Pera bicolor]
Length = 183
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 57/182 (31%), Positives = 84/182 (46%), Gaps = 16/182 (8%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH-----RRDIKRQDISKQLES 182
N+E +G +LYT Y + ILL++MIGAIVL + R +KRQDI ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTPLNRNAVKRQDIFRRNAI 180
Query: 183 NP 184
+
Sbjct: 181 DF 182
>gi|159036136|ref|YP_001535389.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Salinispora
arenicola CNS-205]
gi|157914971|gb|ABV96398.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Salinispora
arenicola CNS-205]
Length = 200
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 45/187 (24%), Positives = 82/187 (43%), Gaps = 10/187 (5%)
Query: 16 IISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIM 75
+ S LVV R+ + + L+ AG++L+L AE VA + +++YVGAV+V LF +M
Sbjct: 16 VGSGALVVATRHLVRAGLYLVLCLAAVAGMYLVLTAELVAWVQVLIYVGAVVVLLLFAVM 75
Query: 76 MLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIG 135
+ I + + G+ + G L + + + + E IG
Sbjct: 76 LTRAPIGASTDLDRPGWPAALIGGGTGLGLAALLVDAYRW-----STVQLPTAGTAERIG 130
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQ----LESNPDNSIVMV 191
+ ++ + P E+ +LL +++GAI+L R D Q + ++ V
Sbjct: 131 EQVFQSWVLPFEVLSMLLLAALVGAIILS-RPDIGRPPVDRDGQGRPGRAGDAADATGGV 189
Query: 192 KVKSGKG 198
K G+G
Sbjct: 190 DGKPGEG 196
>gi|257852722|gb|ACV71373.1| NADH dehydrogenase subunit 6 [Ruptiliocarpon caracolito]
Length = 173
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 11/172 (6%)
Query: 24 TVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEV 83
+NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM I I
Sbjct: 1 RAKNPVHSVLFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFHIQIAE 60
Query: 84 AEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFKGNNVE 132
R S IG++ + + V N+E
Sbjct: 61 IHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRSWTNLE 120
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
+G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 TLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 172
>gi|218439483|ref|YP_002377812.1| NADH dehydrogenase subunit J [Cyanothece sp. PCC 7424]
gi|218172211|gb|ACK70944.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Cyanothece
sp. PCC 7424]
Length = 204
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 87/164 (53%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F + + + + ++ VV + N +YS F L F++ AG+++LL A+FVA +++Y
Sbjct: 7 VQIVSFGILAALVLAAALGVVLLSNIVYSAFLLGGVFLSIAGIYILLNADFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF IM+++ + ++ + + ++ + + S
Sbjct: 67 VGAVNVLILFAIMLVNKQEDFKVLPRRWIRKIATGVVCFGLFALLGTMILITPWSLNSTS 126
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
V + VE IGK ++ + P E++ +LL++M+GAI++ R
Sbjct: 127 PAVVENTLVE-IGKHFFSDFLLPFELASVLLLMAMVGAIIIARR 169
>gi|133900484|gb|ABO41408.1| NADH dehydrogenase subunit 6 [Koilodepas bantamense]
Length = 181
Score = 91.2 bits (225), Expect = 7e-17, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDLFRRNAIDF 179
>gi|239980100|ref|ZP_04702624.1| putative NADH dehydrogenase chain J [Streptomyces albus J1074]
gi|291451954|ref|ZP_06591344.1| predicted protein [Streptomyces albus J1074]
gi|291354903|gb|EFE81805.1| predicted protein [Streptomyces albus J1074]
Length = 216
Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + + ++ L VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 31 EIVFLLVGLVTVGAAVLTVTTRQLVHAALWLVVALGGIAVEYLLLTAEFIAWVQVLIYVG 90
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + A +V + +L +
Sbjct: 91 SVVVLLLFGLMLTRAPIGRSPDTDSGNRPVALAVALATAATLVWVVVDAFRTTWIDLDQA 150
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V + E G L++ + P E +LL +++GAIVL R
Sbjct: 151 VQ--GSTEVTGAALFSSWVLPFEALSVLLLAALVGAIVLSRRT 191
>gi|22125533|ref|NP_668956.1| NADH dehydrogenase subunit J [Yersinia pestis KIM 10]
gi|45442147|ref|NP_993686.1| NADH dehydrogenase subunit J [Yersinia pestis biovar Microtus str.
91001]
gi|51596898|ref|YP_071089.1| NADH dehydrogenase subunit J [Yersinia pseudotuberculosis IP 32953]
gi|108808034|ref|YP_651950.1| NADH dehydrogenase subunit J [Yersinia pestis Antiqua]
gi|108812304|ref|YP_648071.1| NADH dehydrogenase subunit J [Yersinia pestis Nepal516]
gi|145599237|ref|YP_001163313.1| NADH dehydrogenase subunit J [Yersinia pestis Pestoides F]
gi|149365547|ref|ZP_01887582.1| NADH dehydrogenase I chain J [Yersinia pestis CA88-4125]
gi|153949644|ref|YP_001400440.1| NADH dehydrogenase subunit J [Yersinia pseudotuberculosis IP 31758]
gi|162418552|ref|YP_001606297.1| NADH dehydrogenase subunit J [Yersinia pestis Angola]
gi|165925425|ref|ZP_02221257.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165937633|ref|ZP_02226195.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|166008411|ref|ZP_02229309.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166213848|ref|ZP_02239883.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167399044|ref|ZP_02304568.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167422318|ref|ZP_02314071.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167424390|ref|ZP_02316143.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|170023809|ref|YP_001720314.1| NADH dehydrogenase subunit J [Yersinia pseudotuberculosis YPIII]
gi|186895979|ref|YP_001873091.1| NADH dehydrogenase subunit J [Yersinia pseudotuberculosis PB1/+]
gi|218929633|ref|YP_002347508.1| NADH dehydrogenase subunit J [Yersinia pestis CO92]
gi|229838089|ref|ZP_04458248.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229895288|ref|ZP_04510462.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Yersinia pestis
Pestoides A]
gi|229898649|ref|ZP_04513794.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Yersinia pestis
biovar Orientalis str. India 195]
gi|229902648|ref|ZP_04517765.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Yersinia pestis
Nepal516]
gi|270490171|ref|ZP_06207245.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Yersinia
pestis KIM D27]
gi|294504361|ref|YP_003568423.1| NADH dehydrogenase subunit J [Yersinia pestis Z176003]
gi|21958433|gb|AAM85207.1|AE013767_4 NADH dehydrogenase I chain J [Yersinia pestis KIM 10]
gi|45437011|gb|AAS62563.1| NADH dehydrogenase I chain J [Yersinia pestis biovar Microtus str.
91001]
gi|51590180|emb|CAH21817.1| NADH dehydrogenase I chain J [Yersinia pseudotuberculosis IP 32953]
gi|108775952|gb|ABG18471.1| NADH dehydrogenase I chain J [Yersinia pestis Nepal516]
gi|108779947|gb|ABG14005.1| NADH dehydrogenase I chain J [Yersinia pestis Antiqua]
gi|115348244|emb|CAL21172.1| NADH dehydrogenase I chain J [Yersinia pestis CO92]
gi|145210933|gb|ABP40340.1| NADH dehydrogenase I chain J [Yersinia pestis Pestoides F]
gi|149291960|gb|EDM42034.1| NADH dehydrogenase I chain J [Yersinia pestis CA88-4125]
gi|152961139|gb|ABS48600.1| NADH-quinone oxidoreductase, J subunit [Yersinia pseudotuberculosis
IP 31758]
gi|162351367|gb|ABX85315.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis Angola]
gi|165914383|gb|EDR32998.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Orientalis str. IP275]
gi|165922534|gb|EDR39685.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165992793|gb|EDR45094.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166205022|gb|EDR49502.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166958824|gb|EDR55845.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167051548|gb|EDR62956.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167056272|gb|EDR66041.1| NADH-quinone oxidoreductase, J subunit [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|169750343|gb|ACA67861.1| NADH dehydrogenase (quinone) [Yersinia pseudotuberculosis YPIII]
gi|186699005|gb|ACC89634.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Yersinia
pseudotuberculosis PB1/+]
gi|229680095|gb|EEO76194.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Yersinia pestis
Nepal516]
gi|229688197|gb|EEO80268.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Yersinia pestis
biovar Orientalis str. India 195]
gi|229694455|gb|EEO84502.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229701774|gb|EEO89799.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Yersinia pestis
Pestoides A]
gi|262362650|gb|ACY59371.1| NADH dehydrogenase subunit J [Yersinia pestis D106004]
gi|262366279|gb|ACY62836.1| NADH dehydrogenase subunit J [Yersinia pestis D182038]
gi|270338675|gb|EFA49452.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Yersinia
pestis KIM D27]
gi|294354820|gb|ADE65161.1| NADH dehydrogenase subunit J [Yersinia pestis Z176003]
gi|320014615|gb|ADV98186.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 181
Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R G+LA L+ + ++ +S
Sbjct: 62 AIMVLFVFVVMMLNLGNVEQQERAWLKPSMWIGPGLLALVLLSVLIYAISSVSDQGISGE 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 122 MVD---AKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|189346379|ref|YP_001942908.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chlorobium
limicola DSM 245]
gi|189340526|gb|ACD89929.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chlorobium
limicola DSM 245]
Length = 173
Score = 90.8 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+F+ + + S+ VV +N IYS F+L+F F A L++ L A+F+A+ +VVYVG +
Sbjct: 9 IFYIFAAITVFSAAFVVFSKNVIYSAFALLFTFFGVAALYVFLSADFIAVTQIVVYVGGI 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V LF +M + + + K L +L + + + S +
Sbjct: 69 LVLLLFGVMFTNS---IMQTDLKSDVLHVVPGTLLLLATVGGLLFTFYTTGTWKPSDVQL 125
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
G+ VE IG ++Y P E++ +LL +IGA L + Q
Sbjct: 126 HGSVVERIGIETMSRYVLPFEMASILLLAVLIGAAFLARYDKVRNNEQ 173
>gi|225871977|ref|YP_002753431.1| NADH dehydrogenase subunit J [Acidobacterium capsulatum ATCC 51196]
gi|225791616|gb|ACO31706.1| NADH dehydrogenase subunit J [Acidobacterium capsulatum ATCC 51196]
Length = 172
Score = 90.8 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F +F + + ++ R+PI S SLI + A L+LLLGAEF+A ++VY
Sbjct: 1 MHLVLFIIFGAFCVAGAINLLLQRHPINSALSLIVVMTSLAVLYLLLGAEFLAAAQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F F+IM+L+ E + + F L+ F+ +
Sbjct: 61 SGAIMVLFTFVIMLLNAGKEERTHGSRAAYWLGFPGAAALFALLTFI--FLSHQPSLGYA 118
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L + +VL+ P E++ ++L++++GA+ L
Sbjct: 119 VLGPDMVGTGELSQVLFRNLLLPFEVTSVLILIAILGAVALARHTNEK 166
>gi|118340560|gb|ABK80610.1| putative NADH-ubiquinone/plastoquinone oxidoreductase chain 6
subunit J [uncultured marine Nitrospinaceae bacterium]
Length = 169
Score = 90.8 bits (224), Expect = 8e-17, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 90/167 (53%), Gaps = 2/167 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ L FY + ++ + VV +P+ S SLI + AG+F+L A F+A++ +++Y
Sbjct: 1 MELLIFYPLAGFCVVLALGVVFNNSPVGSAISLIGMMLGLAGIFILQQAHFIAILQIIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDI--EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
GA++V F+F+IM+L++ + ++R L S GILA ++ S+ +
Sbjct: 61 AGAIMVLFMFVIMLLNLKKGDDAGWISRERNLLLSVLTGILATGILYKVSDIIFTRKMNT 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ L V IG+ L+T + P E++ +LL +M+GA+VL
Sbjct: 121 PAILTDSFGTVAVIGETLFTDFVLPFEVASILLLAAMVGAVVLAKTK 167
>gi|319650856|ref|ZP_08004993.1| hypothetical protein HMPREF1013_01599 [Bacillus sp. 2_A_57_CT2]
gi|317397454|gb|EFV78155.1| hypothetical protein HMPREF1013_01599 [Bacillus sp. 2_A_57_CT2]
Length = 173
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 87/167 (52%), Gaps = 4/167 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ L F + +A+I L++ + ++ V +L+F FV+ AG+++LL AEF+A + +++Y
Sbjct: 6 EFLAFMFLALVAVIGGVLLLNLTKVVHMVVALVFTFVSIAGIYVLLSAEFLAAVQILIYS 65
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GA+ + LF IM+ + + L F + A + +++ + +
Sbjct: 66 GAITIIMLFGIMLTRHNDTSEPKTGRFRKLLLFLGVLGFAFAVYIG----IYNLDLPSAP 121
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
NN E IG LY+++ P E++ +LL+++IG+IVL R
Sbjct: 122 NDLHVNNTEQIGIELYSKFIIPFEVTSVLLLVALIGSIVLAKRDDEK 168
>gi|157144286|ref|YP_001456707.1| NADH dehydrogenase subunit 6 [Pocillopora damicornis]
gi|157149641|ref|YP_001456721.1| NADH dehydrogenase subunit 6 [Pocillopora eydouxi]
gi|139471334|gb|ABO77151.1| NADH dehydrogenase subunit 6 [Pocillopora damicornis]
gi|139471349|gb|ABO77165.1| NADH dehydrogenase subunit 6 [Pocillopora eydouxi]
gi|169809246|gb|ACA84083.1| NADH dehydrogenase subunit 6 [Pocillopora damicornis]
Length = 187
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
F + F I S +VV+ NP+ S+F L+ F+N+A FLLLG +F+A++ L++YVG
Sbjct: 2 EFFSFFFILGIIGSGVMVVSALNPVLSIFWLVLVFINSAVFFLLLGIDFLALMFLLIYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI--------VCASNFMVFS 116
A+ + FLF+IM+L++ +++ IG + + +F + +
Sbjct: 62 AIAILFLFVIMLLNLTDYPPVLKREVDMTNYIPIGFIIGIFFFSEIASSGLLLGSFQIEN 121
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + +N+E +G++LY ++ FILL++M+G IVL K+QD+
Sbjct: 122 WDLSFPWFLISYHNIEALGQILYVSCFCLFLLASFILLVAMMGVIVLTQETESLSKKQDL 181
Query: 177 SKQLES 182
Q+
Sbjct: 182 FFQINR 187
>gi|257852696|gb|ACV71360.1| NADH dehydrogenase subunit 6 [Fusispermum laxiflorum]
Length = 180
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F N +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRNTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSAIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDIFRRNALDF 179
>gi|11466755|ref|NP_039351.1| NADH dehydrogenase subunit 6 [Marchantia polymorpha]
gi|128802|sp|P06266|NU6C_MARPO RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|11726|emb|CAA28137.1| unnamed protein product [Marchantia polymorpha]
Length = 191
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 7/175 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F I+ S V+ + N +YS L F FV + L+LLL A+FVA +++
Sbjct: 6 SFYETIFLFLESGLILGSLGVILLTNIVYSALFLGFVFVCISLLYLLLNADFVAAAQILI 65
Query: 62 YVGAVIVFFLFIIMMLDIDIE---VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
YVGAV V +F +M+++ G + I ++
Sbjct: 66 YVGAVNVLIIFAVMLINKKQYSNFFVYWTIGDGITLTLCTSIFLLLNNFISNTSWSKIFL 125
Query: 119 GELSRLVFK----GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
LV K N V +IG L T++ P E+ ILL+++IGAI L R ++
Sbjct: 126 MTKPNLVVKDIILINTVRHIGSELLTEFLLPFELMSIILLVALIGAITLARREKK 180
>gi|304413379|ref|ZP_07394852.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Candidatus
Regiella insecticola LSR1]
gi|304284222|gb|EFL92615.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Candidatus
Regiella insecticola LSR1]
Length = 191
Score = 90.8 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 81/168 (48%), Gaps = 3/168 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FY + +A++++ V++ NPI+++ L+ + + A +F LGA F + ++VY
Sbjct: 1 MMEFVFYTAAVIAVLATLRVISHHNPIHALLYLVVSLLAIAAVFFSLGAYFAGALEIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F++MML++ + + K + L + ++ + S E+
Sbjct: 61 AGAIMVLFVFVVMMLNLGDSIQQQEKAWLKPSVWIGPGLLSLTLLVVLMMALGSVTAEIR 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A L R
Sbjct: 121 GTMVD---AKQVGISLFGPYVLAVELASMLLLAGLVVAFHLGREDRGG 165
>gi|56791562|gb|AAW30319.1| NADH dehydrogenase subunit 6 [Liriodendron tulipifera]
Length = 177
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/177 (31%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
S A++S +V +NP++ V I F + +GL LLLG +F AMI+ VV++GA+ F
Sbjct: 1 LSSPALVSGLMVARAKNPVHPVSFPIPVFRDTSGLLLLLGLDFSAMISPVVHIGAIAASF 60
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEG 119
LF++MM +I I R S IG++ +
Sbjct: 61 LFVVMMFNIQIAETHEEVLRYLPVSGIIGLILWWEMFFVLDNETIPLLPTHRNTTSLRYT 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ V N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+
Sbjct: 121 VHAGKVRSWTNLETLGNLLYTYYSVRFLVPSPILLVAMIGAIVLTMHRTTKVKRQDV 177
>gi|257852620|gb|ACV71322.1| NADH dehydrogenase subunit 6 [Ricinus communis]
Length = 180
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDLFRRNAIDF 179
>gi|294814433|ref|ZP_06773076.1| Putative NADH dehydrogenase chain J [Streptomyces clavuligerus ATCC
27064]
gi|326442823|ref|ZP_08217557.1| putative NADH dehydrogenase chain J [Streptomyces clavuligerus ATCC
27064]
gi|294327032|gb|EFG08675.1| Putative NADH dehydrogenase chain J [Streptomyces clavuligerus ATCC
27064]
Length = 218
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ L VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 20 EIVFLLVGLVTFGAAVLTVTTRQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 79
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + AA +V + +L
Sbjct: 80 SVVVILLFGLMLTRAPIGRSPDADSGNRWVALAVALTAATALVWVVVDAFRTTWIDLDGP 139
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V + E G +L+ + P E +LL +++GAIVL +
Sbjct: 140 VQ--GSTEVTGSILFRHWVLPFEALSVLLLAALVGAIVLSRKQ 180
>gi|300775182|ref|ZP_07085044.1| NADH-quinone oxidoreductase subunit J [Chryseobacterium gleum ATCC
35910]
gi|300505922|gb|EFK37058.1| NADH-quinone oxidoreductase subunit J [Chryseobacterium gleum ATCC
35910]
Length = 165
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 90/164 (54%), Gaps = 1/164 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F+L +F+A+ S+ V +NP+Y++ SLI + AG+++LL A+F+A+I ++VY
Sbjct: 1 MDQFLFFLVAFLAVASAVYFVFAKNPLYAILSLIVTMFSIAGMYILLNAQFLAIIQIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FL+I+MML+++ + F L + V + +
Sbjct: 61 AGAIMVLFLYILMMLNLNKADESKKNNTLKFVGVFTAGLL-LIGVLGVFRGIQDNHIVVE 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +N+G++L+ +Y P E++ ++L ++GA+++ +
Sbjct: 120 NVDRGVGLTKNLGRLLFNEYVLPFELASILILAGIVGAVLIGKK 163
>gi|126021018|ref|NP_904241.2| NADH dehydrogenase subunit 6 [Physcomitrella patens subsp. patens]
Length = 197
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F++ I+ S VV + N +YS F L F + L+ L A+FVA +++Y
Sbjct: 7 LQEIIFFILEIGVILGSLGVVLLSNIVYSAFFLGLVFFCISLLYFALNADFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIE------VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS 116
VGAV V +F +M+++ K + +L ++ + + +
Sbjct: 67 VGAVNVLIVFAVMLINKPESLKIFPVWTVGDKITLAICLTSFFLLVNIILNTSWSNITVI 126
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
E + NV+ IG +L TQY P E+ +LL+++IGAIV+ R
Sbjct: 127 TESKGFLESNFTQNVQRIGSLLLTQYLLPFELLSIVLLVALIGAIVIARREN 178
>gi|197253931|ref|YP_002149705.1| NADH dehydrogenase subunit 6 [Stylophora pistillata]
gi|169809260|gb|ACA84096.1| NADH dehydrogenase subunit 6 [Stylophora pistillata]
Length = 187
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 8/186 (4%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
F + F I S +VV+ NP+ S+F L+ F+N+A FLLLG +F+A++ L++YVG
Sbjct: 2 EFFSFFFILGIIGSGVMVVSALNPVLSIFWLVLVFINSAVFFLLLGIDFLALMFLLIYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI--------VCASNFMVFS 116
A+ + FLF+IM+L++ +++ IG + + +F + +
Sbjct: 62 AIAILFLFVIMLLNLTDYPPVLKREVDMTNYIPIGFIIGIFFFSEIASSGLFLGSFQIEN 121
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + +N+E +G++LY ++ FILL++MIG IVL K+QD+
Sbjct: 122 WDLSFPWFLISYHNIEALGQILYVSCFCLFLLASFILLVAMIGVIVLTQETEFLSKKQDL 181
Query: 177 SKQLES 182
Q+
Sbjct: 182 FFQINR 187
>gi|257852600|gb|ACV71312.1| NADH dehydrogenase subunit 6 [Codiaeum variegatum]
Length = 180
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDLFRRNAIDF 179
>gi|133900428|gb|ABO41380.1| NADH dehydrogenase subunit 6 [Denhamia celastroides]
Length = 181
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDISGLLLLLGLDFSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTKRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDVFRRNAIDF 179
>gi|238753746|ref|ZP_04615107.1| NADH-quinone oxidoreductase subunit J [Yersinia ruckeri ATCC 29473]
gi|238707982|gb|EEQ00339.1| NADH-quinone oxidoreductase subunit J [Yersinia ruckeri ATCC 29473]
Length = 181
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ + +A++++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R A +V S + + +
Sbjct: 62 AIMVLFVFVVMMLNLGKVDEQERAWLKPSVWIG---PALLALVLLSVLIYAISSLTDQGI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + H+
Sbjct: 119 SGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPG 164
>gi|119356795|ref|YP_911439.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Chlorobium
phaeobacteroides DSM 266]
gi|119354144|gb|ABL65015.1| NADH dehydrogenase subunit J [Chlorobium phaeobacteroides DSM 266]
Length = 172
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ FYLF+ + + S+ VV R+ IYS FSL+F F A L++LL A+F+A+ +VVYVG
Sbjct: 7 TIIFYLFAAITVFSAAFVVFSRSVIYSAFSLLFTFFGTAALYVLLSADFIAVTQVVVYVG 66
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V LF +M + + + K L +L A + + + S +
Sbjct: 67 GILVLLLFGVMFTNS---IMQTDLKTDVLHVVPGTLLFAAITGGMLYVFYTTGTWKSSLV 123
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+G+ VE IG ++Y P E++ +LL +IGA L +
Sbjct: 124 TLQGSVVERIGYETMSRYILPFEMASILLLAVLIGAAFLARFDKPG 169
>gi|133900450|gb|ABO41391.1| NADH dehydrogenase subunit 6 [Euonymus alatus]
Length = 181
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDISGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDVFRRNAIDF 179
>gi|41203479|ref|NP_957739.1| NADH dehydrogenase subunit 6 [Emiliania huxleyi]
gi|33114165|gb|AAP94721.1| NADH dehydrogenase subunit 6 [Emiliania huxleyi]
Length = 207
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M +L FY I S+ +V+ RNP+YSV L+ FVN + L L E++ ++ +VVY
Sbjct: 1 MSTLIFYFIGTFCIFSALMVIFSRNPVYSVLFLVLTFVNVSSLLFFLELEYLPLVFIVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V F+F++MML+I I + ++ F + + I A+ S + S
Sbjct: 61 VGALAVLFIFVMMMLNIRISDLKENNEQLLPVIFILTAIFFFHIFFATKSDFASLKNFFS 120
Query: 123 RLVFK-----------------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N+ N+G +LY+++ Y ++GF+LLL+M+G I+L L
Sbjct: 121 TFNNEYSLITADLMLTTNWFSFDSNMRNLGFLLYSEFFYLFILAGFVLLLAMLGTIILTL 180
Query: 166 RHRRDIKRQDISKQLESNPDNSIVMVK 192
R + Q S Q+ N + +I K
Sbjct: 181 RRFFKGRIQHPSFQIMRNFETAIKSTK 207
>gi|200004048|ref|YP_002221382.1| NADH dehydrogenase subunit 6 [Blastocystis sp. NandII]
gi|156617373|gb|ABU87591.1| NADH dehydrogenase subunit 6 [Blastocystis sp. NandII]
Length = 194
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 107/190 (56%), Gaps = 5/190 (2%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FF+LF+ + IIS F+ ++V N IY+V LI AF ++ + LL +++A++ +++YVGA+
Sbjct: 4 FFFLFASIIIISVFMTISVNNAIYAVLFLILAFFSSMCILFLLNVDYLALMFILIYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA----EGELS 122
+ FLF++MML I I K F+ ++ +++ F VF
Sbjct: 64 TILFLFVVMMLKIKINEKNTTKFISFINIIICCLIIYNVLLNTDIFNVFLNTDLTYTNWF 123
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR-QDISKQLE 181
++ +N++ +G+V++ Y + +SGF+LL+ MI AI+L + ++R Q + +QL
Sbjct: 124 SNLYYIDNIKMLGQVIFNNYYFYFILSGFVLLIGMISAILLSKESNKVVRRYQLVYQQLS 183
Query: 182 SNPDNSIVMV 191
N++ +V
Sbjct: 184 REVSNAVFLV 193
>gi|301353210|ref|YP_003795207.1| NADH dehydrogenase subunit 6 [Proteromonas lacertae]
gi|301353240|ref|YP_003795237.1| NADH dehydrogenase subunit 6 [Proteromonas lacertae]
gi|290573158|gb|ADD46345.1| NADH dehydrogenase subunit 6 [Proteromonas lacertae]
gi|290573188|gb|ADD46375.1| NADH dehydrogenase subunit 6 [Proteromonas lacertae]
Length = 197
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 112/196 (57%), Gaps = 7/196 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M ++FF LF+ + +IS +VV+V N IYSV LIF+F N L LLLG +F+++I L++Y
Sbjct: 1 MSNIFFNLFASLLLISLIMVVSVNNAIYSVLFLIFSFFNVMCLLLLLGVDFISLIFLIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+GA+ V FLF+IMM+ + E K + I ++ FMVF E
Sbjct: 61 LGAITVLFLFVIMMIQLKTEDFGNFKFIPVFCFVVLFIFFIDIFKNNDVFMVFLNENSNL 120
Query: 123 RL------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR-QD 175
+ +N+ IG++ YT +A ISG ILL++MIGAI+L L+ + +++ Q+
Sbjct: 121 NYMNWFLKIINIDNIRMIGQIAYTYFAVYFIISGIILLIAMIGAILLSLKKNQYVRKWQN 180
Query: 176 ISKQLESNPDNSIVMV 191
S+QL +N+I V
Sbjct: 181 TSQQLSRCVENAIFFV 196
>gi|325067547|ref|ZP_08126220.1| NADH:ubiquinone oxidoreductase subunit J [Actinomyces oris K20]
Length = 281
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 71/169 (42%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F + + + + V+T + + + ++I ++ A L+++ + F+ + +VVY
Sbjct: 27 EAIVFGVVALVTVACGIGVLTAKRAVNAAINMIGIMISLAVLYIVNESPFMGITQVVVYT 86
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV+ LF+IM++ + + I + + +
Sbjct: 87 GAVMTLVLFVIMLVGVGGDEPVGAAGTVMRRPVLILLGLGLAGALTAVVWRSTLPTPAGL 146
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + LY + +E++ +L+++ +GA+ L R R +
Sbjct: 147 KDGAKAAPDLLAVTLYHDHVVTMELTAILLIVAAVGALTLTHRQRIRAR 195
>gi|75294069|sp|Q6YXQ0|NU6C_PHYPA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|34494824|dbj|BAC85091.1| NADH dehydrogenase ND6 subunit [Physcomitrella patens subsp.
patens]
Length = 200
Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + F++ I+ S VV + N +YS F L F + L+ L A+FVA +++Y
Sbjct: 10 LQEIIFFILEIGVILGSLGVVLLSNIVYSAFFLGLVFFCISLLYFALNADFVAAAQILIY 69
Query: 63 VGAVIVFFLFIIMMLDIDIE------VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS 116
VGAV V +F +M+++ K + +L ++ + + +
Sbjct: 70 VGAVNVLIVFAVMLINKPESLKIFPVWTVGDKITLAICLTSFFLLVNIILNTSWSNITVI 129
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
E + NV+ IG +L TQY P E+ +LL+++IGAIV+ R
Sbjct: 130 TESKGFLESNFTQNVQRIGSLLLTQYLLPFELLSIVLLVALIGAIVIARREN 181
>gi|291285966|ref|YP_003502782.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Denitrovibrio
acetiphilus DSM 12809]
gi|290883126|gb|ADD66826.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Denitrovibrio
acetiphilus DSM 12809]
Length = 170
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 92/166 (55%), Gaps = 1/166 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ ++ F++ A++S+ ++T NP++S ++ F + AG+F+ L AEF+A I ++V
Sbjct: 4 ILANIGFWVLGITAVVSALFLITRENPVHSALWMLLTFFSVAGIFVQLDAEFIAAIQVMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-MVFSAEGE 120
Y GA++V ++F++M+L+ + LG I+ ++++ ++ +A+
Sbjct: 64 YAGAILVLYMFVVMLLNPKSNGFIKMPFKVVLGGIVAFIVFLQIVMTLMGADIIKTAKLT 123
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
NV+ G L+T Y P EI +LL++MIGAIV+ +
Sbjct: 124 GIADPHNFGNVKMFGIDLFTTYLVPFEIVSIMLLVAMIGAIVIAKK 169
>gi|296268313|ref|YP_003650945.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Thermobispora bispora DSM 43833]
gi|296091100|gb|ADG87052.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermobispora
bispora DSM 43833]
Length = 176
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L +A+ S LVVT + +++ L+ F AG +L+L AEFVA + +++YVG
Sbjct: 12 EIVFLLLGLVALGSGVLVVTTKRLVHAALWLVVCFGALAGCYLVLTAEFVAWVQVLIYVG 71
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV+V LF IM+ +E + + + A ++V ++ + L
Sbjct: 72 AVVVLLLFGIMLTRAPTGRSEELDSGNRWAAALVALATAGVLVTV---VISGFRDAYAPL 128
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ IG ++ + P E+ +LL ++IGAIV+ +
Sbjct: 129 EPGRGSAGEIGAGIFRTWVLPFEVLSLLLLAALIGAIVISRTDITGRR 176
>gi|24372599|ref|NP_716641.1| NADH dehydrogenase subunit J [Shewanella oneidensis MR-1]
gi|24346624|gb|AAN54086.1|AE015546_3 NADH dehydrogenase I, J subunit [Shewanella oneidensis MR-1]
Length = 183
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L FY + +A+ S+ V++ NP++++ +LI + + A +F LGA F + ++VY G
Sbjct: 2 ELAFYASALVAVYSTLRVISTSNPMHALLNLIISLIAVAMIFFCLGAAFAGALQVIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + A+ + + G+L+ L+ ++ ++ G ++
Sbjct: 62 AIMVLFVFVVMMLNLGSDQAQEKNWLTPMTWVGPGLLSLTLLGFLAHGILGVTGG---QI 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL M+ A L +
Sbjct: 119 GLTEVSAKQVGIELFGPYVLAVELASILLLAGMVTAYHLGREDKSG 164
>gi|271962240|ref|YP_003336436.1| NADH-ubiquinone oxidoreductase protein, chain J [Streptosporangium
roseum DSM 43021]
gi|270505415|gb|ACZ83693.1| putative NADH-ubiquinone oxidoreductase protein, chain J
[Streptosporangium roseum DSM 43021]
Length = 178
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q + F L +A+ S+ LVVT R +++ L+ F AG +L+L AEFVA + +++
Sbjct: 11 TGQEIVFLLLGAVAVGSALLVVTTRQLVHAALWLVVCFGALAGGYLVLTAEFVAWVQVLI 70
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA++ LF IM+ I R + + I A ++V ++
Sbjct: 71 YVGAIVALLLFGIMLTRAPIGRTADLDSRNRPAAAVVAIATAAVLVTV---VIDGFRTAY 127
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ L G + + +G ++ + P E +LL +++GAIVL
Sbjct: 128 APLEPGGGSAKELGSSIFRNWVLPFEALSVLLLAALVGAIVLSR 171
>gi|269926640|ref|YP_003323263.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermobaculum
terrenum ATCC BAA-798]
gi|269790300|gb|ACZ42441.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermobaculum
terrenum ATCC BAA-798]
Length = 173
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + S F LF+ + ++ + +VV RNP++ V ++ FVN A +F+LL A+F+A++ ++
Sbjct: 1 MDLVSWLFILFAVIGLLGAVMVVVARNPVHCVLFMLLTFVNIAAMFVLLDAQFIAILQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG- 119
VY GA++V FLF++M+L R L + L + F G
Sbjct: 61 VYSGAILVLFLFVVMLLQQAERPIPMLAARVQLPVALVVGGLFLLEIIVVTFGNIITAGR 120
Query: 120 ----ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ G NV+ +G+ L+T++ P EI+ +LL++ IGA+ L
Sbjct: 121 KGGDTPQAIAQAGGNVQALGEQLFTRWLLPFEIASVLLLVAAIGALYLAKE 171
>gi|91200371|emb|CAJ73417.1| strongly similar to NADH dehydrogenase I chain J [Candidatus
Kuenenia stuttgartiensis]
Length = 189
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 92/164 (56%), Gaps = 2/164 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ FY+ S +A++S+ +V+T +N ++++ LI + ++ + +F +LGA F+A + +++Y GA
Sbjct: 8 ITFYIASIVAVVSTLMVITRKNAVHALLYLIVSLLSVSIIFFILGAPFMAALEVIIYAGA 67
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
++V F+F+IMML++ E A + + + ++ +++ ++ G+ V
Sbjct: 68 IMVLFIFVIMMLNLGSEAARMENQLLNPKMWIVPVILTLILIIEFIIVLIKINGQEYNSV 127
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + +G L+ Y +E++ +LL ++GA L ++
Sbjct: 128 I--ISPKQVGISLFGTYLLGVELAAMLLLAGIVGAYHLGKEKKK 169
>gi|197121682|ref|YP_002133633.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter sp. K]
gi|220916478|ref|YP_002491782.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter dehalogenans 2CP-1]
gi|196171531|gb|ACG72504.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter sp. K]
gi|219954332|gb|ACL64716.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 211
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + FY+ + + + + V RN +YS F L+ A + A L++LL A+FVA+ L++Y
Sbjct: 47 LPDVLFYVLAVLTVAGAAGVALSRNILYSTFGLLTALLGAGALYVLLSADFVAVTQLLIY 106
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+G V+V LF +M+ + E+ G G F + + AA +++ + +
Sbjct: 107 IGGVLVLILFAVMLTNRITEINVSNTSFGLFGGFLLFVSAAPVLLAVALLT----PWQAG 162
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ IG +++ P E++ +LL +++GAIV+ +
Sbjct: 163 PAAPLAPTTQAIGDAFLSRWLLPFEVASLVLLSTLVGAIVIARKE 207
>gi|289608459|emb|CBI60588.1| unnamed protein product [Sordaria macrospora]
Length = 184
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/146 (40%), Positives = 87/146 (59%), Gaps = 3/146 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
V+Q+L FYLF+ + + S+ L +T RNP++SV LI AF NAAGL +L GAEF+AM+ ++V
Sbjct: 39 VIQTLAFYLFATIVVASAALTITSRNPVHSVLWLILAFFNAAGLMVLCGAEFIAMLLVIV 98
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA---E 118
YVGAV V FLF++MMLDID R + +L A +V + +
Sbjct: 99 YVGAVAVLFLFVVMMLDIDFTELRAGFVRYLPAGLALAVLLAVELVVGAYAWTAARIDLA 158
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAY 144
++ N+E IG++LY++Y Y
Sbjct: 159 KRIAPTDVAVPNIEAIGRLLYSRYLY 184
>gi|228994013|ref|ZP_04153915.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus pseudomycoides
DSM 12442]
gi|229000082|ref|ZP_04159652.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus mycoides
Rock3-17]
gi|228759619|gb|EEM08595.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus mycoides
Rock3-17]
gi|228765811|gb|EEM14463.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus pseudomycoides
DSM 12442]
Length = 170
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F+L S AII L++ + ++ + +L+F F++ AGL+ LL AEFV + +++Y GA
Sbjct: 2 IAFFLLSLTAIIGGILMLNLTKVMHMMLALVFTFLSIAGLYFLLSAEFVGVAQILIYSGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+ + +F IM+ D E FF ++ ++ A N + F+ +
Sbjct: 62 ITIIMIFGIMLTKHDA-ENESSFSFRKWLIFFAVVVFGGVMYFAVNNIDFTNRSVQGSVP 120
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
N IG +LY++Y P E++ ILL++++GAIVL + ++
Sbjct: 121 LHEQNTLQIGTLLYSKYVIPFELTSVILLVALVGAIVLAKKDEKE 165
>gi|145932352|ref|YP_001165400.1| NADH dehydrogenase subunit 6 [Phytophthora sojae]
gi|110169595|gb|ABG54061.1| NADH dehydrogenase subunit 6 [Phytophthora sojae]
Length = 236
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 65/230 (28%), Positives = 111/230 (48%), Gaps = 39/230 (16%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++FFY FS +A+ S+ V+ N IYS F LI F N+ GL L+ EF++++ ++
Sbjct: 1 MDFETIFFYTFSTIALTSAIFVIYSTNTIYSAFFLILVFTNSTGLLLISEVEFLSIMLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGF-----LGSFFIGILAAELIVCASNFMVF 115
+YVGA+ V FLF+IMMLD+++ + + + F + I+ + F +
Sbjct: 61 IYVGAITVLFLFVIMMLDVNVLIDKNKINNNFGYLPIIFLISFIFFLETFIMFSKVFTSY 120
Query: 116 SAEGELS----------------------------------RLVFKGNNVENIGKVLYTQ 141
S + N+E IG++LY+
Sbjct: 121 YHLINNSFFNQEINTLFFFKDSMKGTFEIFVDVKPFLKNFINQLDTITNIETIGQILYSY 180
Query: 142 YAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMV 191
YA+ ++G ILL+++IGA+ L + ++ I +Q+I KQL N +I V
Sbjct: 181 YAFFFLVAGIILLIALIGAVTLTKKEKKKIFKQNIYKQLSRNSLKAIFNV 230
>gi|206942067|gb|ACI22630.1| NADH-plastoquinone oxidoreductase subunit 6 [Aneura pinguis]
Length = 192
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 5/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F I+ S VV + N ++S F L F A L+L L ++F+A +++
Sbjct: 6 SFHETVFIFPESGPILGSLGVVPLTNIVHSAFLLGFVSACTAPLYLSLDSDFIAAAQVLI 65
Query: 62 YVGAVIVFFLFIIMML--DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM---VFS 116
YVGA+ V +F +M++ + A G IGI ++
Sbjct: 66 YVGAINVLLIFAVMLIKKGTEDYSAYKTVGDGITLVPCIGIFLLSDNTISNTSWSEVYLI 125
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
A + +N+ IG L T++ P E+ ILL++++GAI L +
Sbjct: 126 ARSNDDEGIVPMDNIRRIGLELVTEFFIPFELMSLILLIALVGAITLARARKT 178
>gi|257852586|gb|ACV71305.1| NADH dehydrogenase subunit 6 [Endodesmia calophylloides]
Length = 180
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFSILVFRDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTAYLKYTIYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQDI ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTHGAVKRQDIFRRNAIDF 179
>gi|51893909|ref|YP_076600.1| NADH dehydrogenase I subunit J [Symbiobacterium thermophilum IAM
14863]
gi|51857598|dbj|BAD41756.1| NADH dehydrogenase I subunit J [Symbiobacterium thermophilum IAM
14863]
Length = 176
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 82/167 (49%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q F + + + ++S++ +VT ++ + +F AG+FLL+ AEF+A I ++
Sbjct: 7 MSGQFWTFIILAVVTLVSTYRMVTTPLITHAALFMALSFTAVAGIFLLMQAEFIAAIQVL 66
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA+ +F IM+ + + +++ S ++ + ++ +A
Sbjct: 67 VYAGAITTMVIFAIMLSGLRDIKRQQQERVKLWRSNPAVLVVGAVFAAFMLYLYSTANLP 126
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ V IG L+T Y P E++ +LL++MIGAI+L +
Sbjct: 127 AGGGERQVVPVSAIGSQLFTTYVIPFEVASILLLVAMIGAIILTAKE 173
>gi|9695394|ref|NP_037616.1| NADH dehydrogenase subunit 6 [Phytophthora infestans]
gi|6692646|gb|AAF24789.1|U17009_22 NADH dehydrogenase subunit 6 [Phytophthora infestans]
gi|58012152|gb|AAW62560.1| NADH dehydrogenase subunit 6 [Phytophthora infestans]
Length = 236
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 39/231 (16%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++FFY FS +A+ S+ V+ N IYS F LI F N+ GL L+ EF++++ ++
Sbjct: 1 MDFETIFFYTFSTIALTSAIFVIYSTNTIYSAFFLILVFTNSTGLLLISEVEFLSIMLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGF-----LGSFFIGILAAELIVCASNFMVF 115
+YVGA+ V FLF+IMMLD+++ + + + F + ++ + F +
Sbjct: 61 IYVGAITVLFLFVIMMLDVNVLIDKNKINNNFGYLPIIFLISFIFFLETFVMFSKVFTSY 120
Query: 116 SAEGELS----------------------------------RLVFKGNNVENIGKVLYTQ 141
S + N+E IG++LY+
Sbjct: 121 YHLINNSFFNQEVNTLFFFRDSMKGTFEIFVDVKPFLKNFINQLDTITNIETIGQILYSY 180
Query: 142 YAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVK 192
YA+ +G ILL+++IGA+ L + ++ +Q+I KQL N +I V
Sbjct: 181 YAFFFLAAGIILLIALIGAVTLTKKEKKKNFKQNIYKQLSRNSLKAIFNVN 231
>gi|115375207|ref|ZP_01462473.1| NADH-quinone oxidoreductase chain 10 [Stigmatella aurantiaca
DW4/3-1]
gi|310818917|ref|YP_003951275.1| NADH dehydrogenase I subunit j [Stigmatella aurantiaca DW4/3-1]
gi|115367769|gb|EAU66738.1| NADH-quinone oxidoreductase chain 10 [Stigmatella aurantiaca
DW4/3-1]
gi|309391989|gb|ADO69448.1| NADH dehydrogenase I, subunit J [Stigmatella aurantiaca DW4/3-1]
Length = 167
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 89/167 (53%), Gaps = 1/167 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ F F+F+ + S+ +V+ ++PI+S +L+ F AG+++LL A +A++ ++
Sbjct: 1 MNIEQALFGAFAFLTLFSAAVVIFAKSPIHSAMALVSTFFFLAGIYVLLWAHTLAVMQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA++V FLF+IM+L++ E PR + + + + S +
Sbjct: 61 VYAGAIMVLFLFVIMLLNLGEEPPGPRLTLTRIIGGATALGLFAALAITLE-RLPSTVAD 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
L +E IGK +++ + +P E +LL+SM+G++V+
Sbjct: 120 LGAQAQTFGTLETIGKAIFSSWLFPFEAVSLLLLVSMVGSVVVAKSR 166
>gi|257852742|gb|ACV71383.1| NADH dehydrogenase subunit 6 [Medusandra richardsiana]
Length = 180
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVSFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTHGAVKRQDVFRRNAIDF 179
>gi|296124099|ref|YP_003631877.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Planctomyces
limnophilus DSM 3776]
gi|296016439|gb|ADG69678.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Planctomyces
limnophilus DSM 3776]
Length = 239
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ L FY+ + A++ L+ T RNP+Y+ A + GLF++ A F+A +T++V
Sbjct: 58 LVRDLLFYMAAGTAVLGGLLMTTQRNPVYAALWFAVATLGVCGLFVINSAPFLAAVTIIV 117
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA++V F+F+IM+ + R + + +G L ++ L
Sbjct: 118 YAGAIVVTFVFVIMLAQQEQGSGYDRIPQQPFLATVLGCLLVGTMLLGIEKTFGPESSRL 177
Query: 122 S-----------RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
S + + +G+ L+T Y + +E++G +LL++ IGAI + R +
Sbjct: 178 SVDRTALHVSSLPVENDLGSPGGVGRSLFTDYLFAVELAGTVLLVATIGAIAIAPRRPQG 237
Query: 171 I 171
Sbjct: 238 S 238
>gi|257852618|gb|ACV71321.1| NADH dehydrogenase subunit 6 [Omphalea diandra]
Length = 180
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + M + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNMASLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLE 181
N+E +G +LYT Y + ILL++MIGAIVL + R +KRQD+ ++
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHSNRHGAVKRQDVFRRNA 176
>gi|257852626|gb|ACV71325.1| NADH dehydrogenase subunit 6 [Tetrorchidium cf. macrophyllum Bell
et al. 93-204]
Length = 180
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF-----------K 127
I I R S IG++ + +
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTASLRYKVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHSPTHGAVKRQDLFRRNAIDF 179
>gi|58201991|gb|AAW67046.1| NADH dehydrogenase subunit 6 [Phytophthora infestans]
gi|58202038|gb|AAW67092.1| NADH dehydrogenase subunit 6 [Phytophthora infestans]
Length = 236
Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 39/231 (16%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++FFY FS +A+ S+ V+ N IYS F LI F N+ GL L+ EF++++ ++
Sbjct: 1 MDFETIFFYTFSTIALTSAIFVIYSTNTIYSAFFLILVFTNSTGLLLISEVEFLSIMLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGF-----LGSFFIGILAAELIVCASNFMVF 115
+YVGA+ V FLF+IMMLD+++ + + + F + ++ + F +
Sbjct: 61 IYVGAITVLFLFVIMMLDVNVLIDKNKINNNFGYLPIIFLISFIFFLETFVMFSKVFTSY 120
Query: 116 SAEGELS----------------------------------RLVFKGNNVENIGKVLYTQ 141
S + N+E IG++LY+
Sbjct: 121 YHLINNSFFNQEVNTLFFFRDSMKGTFEIFVDVKPFLKNFINQLDTITNIETIGQILYSY 180
Query: 142 YAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVK 192
YA+ +G ILL+++IGA+ L + ++ +Q+I KQL N +I V
Sbjct: 181 YAFFFLAAGIILLIALIGAVTLTKKEKKKNFKQNIYKQLSRNSLKAIFNVN 231
>gi|11467872|ref|NP_050923.1| NADH dehydrogenase subunit 6 [Nephroselmis olivacea]
gi|14194995|sp|Q9TKV3|NU6C_NEPOL RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|5880801|gb|AAD54894.1|AF137379_117 subunit 6 of NADH-plastoquinoneoxidoreductase [Nephroselmis
olivacea]
Length = 169
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 5/166 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q+ + ++ V+ + + +Y+ F L F AG+++LL A+FVA ++V
Sbjct: 3 IVQNFSSAALTTGILLGCLGVIFLPSIVYAAFLLGAVFFCLAGIYVLLHADFVAAAQVLV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ V LF IM+++ + L L+ S
Sbjct: 63 YVGAINVLILFAIMLVNPQDAPPRALDSPPLIPGIACIGLLGVLVQMISTTSWL-----T 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ N++ +G L++ E+ +LL++++GAIVL R
Sbjct: 118 PPWTPEPNSLPVLGGHLFSDCLLAFEVMSLVLLVALVGAIVLARRE 163
>gi|109156421|ref|YP_654308.1| NADH dehydrogenase subunit 6 [Ricordea florida]
gi|108515291|gb|ABF93388.1| NADH dehydrogenase subunit 6 [Ricordea florida]
Length = 201
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 24/197 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F+ + S +V++ NP++S+F LI FV +A LFLLLG +FVA++ L++YVGA+ +
Sbjct: 1 MLAFVIVGSGIMVISTLNPVHSIFWLIVVFVGSAVLFLLLGIDFVALMFLIIYVGAIAIL 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------------- 116
FLF+IM+L++ R + + I + S
Sbjct: 61 FLFVIMLLNLADFPPAFRWGGEADMTNYAPIGLIIGVFFFSEVASSWLIVGGPYAHRASF 120
Query: 117 -------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ S + K +N+E +G++LY Y ++ ILL++MIG IVL
Sbjct: 121 WVEVGEAWDLACSWFLMKYHNIEALGRILYIACYYLFILASLILLVAMIGGIVLTQEVGS 180
Query: 170 DI----KRQDISKQLES 182
++ K+Q+I Q
Sbjct: 181 EVGPMAKKQEIFFQTSR 197
>gi|317121162|ref|YP_004101165.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thermaerobacter marianensis DSM 12885]
gi|315591142|gb|ADU50438.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thermaerobacter marianensis DSM 12885]
Length = 222
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 9/157 (5%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ F + + + ++ ++ VVT +S L FV AGLF+LL A A++ ++
Sbjct: 1 MTGAAVIFAILAAVVLLGAWRVVTSEQIAHSALFLGLTFVGMAGLFVLLQAPTFALLHVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGA++ +F IM+ D + G + I ++ +
Sbjct: 61 VYVGAILTVVVFAIMLSDPEELRGAGDLPPGERLRRRLLSPYYGWIPVVVAGVLVAVVLA 120
Query: 121 LSRLV---------FKGNNVENIGKVLYTQYAYPLEI 148
+++ IG+ ++T+YA P E+
Sbjct: 121 SLAAAQLPRVPLGEPVADDLRAIGRDMFTRYALPFEV 157
>gi|270267568|ref|YP_003331252.1| NADH dehydrogenase subunit 6 [Dendronephthya gigantea]
gi|209887406|gb|ACI95028.1| NADH dehydrogenase subunit 6 [Dendronephthya gigantea]
Length = 185
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 17/187 (9%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + S +++SF+V++ NP+YSVF L+ AFVNAA +F+ L +++ +I ++VYVGA+
Sbjct: 4 LFIIISLGIVVASFMVISTPNPVYSVFWLVIAFVNAAVMFISLELDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IM++ +V + L + L+ + ++ + ++
Sbjct: 64 AILFLFVIMLIQQPNKVYSQDHSHFLPVGLSVIFLFSSLLTNSPKYIS-------NPVIG 116
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD----------IKRQDI 176
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 117 SKTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPFLYNFYGESLRSRQDL 176
Query: 177 SKQLESN 183
Q+
Sbjct: 177 FLQISRE 183
>gi|297159544|gb|ADI09256.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces bingchenggensis
BCW-1]
Length = 238
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 3/161 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + + + + + VT + +++ L+ A FLLL AEF+A + +++YVG
Sbjct: 21 EITFLLVAVVTLGGAVVTVTTKQLVHAALWLVVTLGGLAVEFLLLTAEFIAWVQVLIYVG 80
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + +A +V + +L +
Sbjct: 81 SVVVLILFGLMLTKAPIGRSPDADSGNRPAALAVAVASAAALVWVVVDAFRATWIDLGEV 140
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + G L+ + P E +LL +++GAIVL
Sbjct: 141 ---QGSTKVTGVSLFRHWVLPFEALSVLLLAALVGAIVLSR 178
>gi|284042624|ref|YP_003392964.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Conexibacter
woesei DSM 14684]
gi|283946845|gb|ADB49589.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Conexibacter
woesei DSM 14684]
Length = 244
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F++ + A+ + VV +RNP YSV +L+ ++ + LFLLL AEF+A ++VY
Sbjct: 1 MAEVIFFIAAIGALSGAIGVVALRNPFYSVLALVGHLLSLSALFLLLRAEFLAAAQVIVY 60
Query: 63 VGAVIVFFLFIIMML-DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
GAV V ++F++ + D + + + + F+G+L EL + + + +GE
Sbjct: 61 AGAVTVLYVFVVSYVGDGTVPLGPGGARLRNVAMLFVGMLFVELCIALLGSGLKAIDGEG 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ V E+IG+ L T++ P E++ +LL++ +GA++L R
Sbjct: 121 APYVPGFGTPESIGEALLTKFLLPFELASLLLLVAAVGAVMLARRR 166
>gi|332971170|gb|EGK10134.1| NADH-quinone oxidoreductase subunit J [Psychrobacter sp.
1501(2011)]
Length = 241
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY +AII+S V+ + NP++++ S+I + AG+F +LGA F + ++VY GA++
Sbjct: 15 FYALGLVAIIASLRVIMLANPVHAILSMIVTLLALAGIFFILGAPFAGALQVIVYAGAIL 74
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG-------- 119
V F+F+IMML++ + E K ++ + +I +++ G
Sbjct: 75 VLFVFVIMMLNLGTKNEERESKWLSSDTWAVPAALTFIIAVVLTYLISMGNGLSHADGSV 134
Query: 120 ELSRLVFKGNNVENIGKVLYTQY 142
+ + + + + +G L+T+Y
Sbjct: 135 VAATIGAETVSAKQVGIALFTEY 157
>gi|326777313|ref|ZP_08236578.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
cf. griseus XylebKG-1]
gi|326657646|gb|EGE42492.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
cf. griseus XylebKG-1]
Length = 212
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + + ++ + VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 35 EIAFLLVGLVTLGAAVITVTTRQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 94
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + AA +V + +L
Sbjct: 95 SVVVLLLFGLMLTRAPIGRSPDADSGNRWVALGVAAAAAAALVWVVVDAFRTTWIDLDGP 154
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ E G L+ + P E +LL +++GAIVL +H D
Sbjct: 155 AQ--GSTEVTGAFLFRNWVLPFEALSVLLLAALVGAIVLSRKHDTDT 199
>gi|257852652|gb|ACV71338.1| NADH dehydrogenase subunit 6 [Elvasia calophyllea]
Length = 168
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 55/168 (32%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+VV +NP++SV I F + +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVVRAKNPVHSVLFPILVFRDTSGLLLFLGLDFFAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYMVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
N+E +G +LYT Y + ILL++MIGAIVL + +KRQD
Sbjct: 121 WTNLETLGNLLYTYYFVWFLLPSLILLVAMIGAIVLTMHRTTKVKRQD 168
>gi|162452498|ref|YP_001614865.1| putative NADH dehydrogenase (ubiquinone) [Sorangium cellulosum 'So
ce 56']
gi|161163080|emb|CAN94385.1| putative NADH dehydrogenase (ubiquinone) [Sorangium cellulosum 'So
ce 56']
Length = 212
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 1/170 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + FF L S + ++ V RNPI L+ + V AGL+L+L AEF+A I ++V
Sbjct: 3 IFEFAFFGLASLLVLLGGLATVAARNPIRGAMGLLTSIVGIAGLYLMLSAEFLAAIQILV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEP-RKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
Y GA+++ FLF+IM+L R + ++ +
Sbjct: 63 YAGAIVILFLFVIMLLGPSATSPRDARTAVPRYVGAGVLGASSIGALALVASASKPGVLA 122
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +E +G L+T+ P E+SG +LL+++IGA+ + + D
Sbjct: 123 VPAAPESLGTIEGLGHELFTKGIVPFELSGALLLVAVIGAVAVARGKQVD 172
>gi|296120539|ref|YP_003628317.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Planctomyces
limnophilus DSM 3776]
gi|296012879|gb|ADG66118.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Planctomyces
limnophilus DSM 3776]
Length = 290
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/246 (18%), Positives = 88/246 (35%), Gaps = 54/246 (21%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F +F+ + + +V +N + F L+ + +AAGLF LL A+F+A L+
Sbjct: 1 MTVLQFLFAVFASTTCLGAVMVALTQNIVRMAFWLMVSVASAAGLFFLLHADFLAAAQLL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+G +V +F +M+ + + + + + L++ + +
Sbjct: 61 VYLGGTVVILVFGVMLTAGGRTKSLSPTGGETILAAALALSLIMLLLFTVGSVDWERLNT 120
Query: 121 LSRLVF----------------------------------KGNNVENIGK---------- 136
L++ G+ +G
Sbjct: 121 LAKADQILPSAVQPENHTEPQLTESSPTGDERSPVLGAGRNGDTGHALGSAMIGFRPQWN 180
Query: 137 -----VLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMV 191
VL T Y P EI LL+ +IGA L KRQ S + ++ ++ ++
Sbjct: 181 RENQLVLGTGYLLPFEIISVHLLVVLIGAAYLAR-----AKRQLPSSRRSTDATSTSLLW 235
Query: 192 KVKSGK 197
S +
Sbjct: 236 DQDSAQ 241
>gi|317050800|ref|YP_004111916.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Desulfurispirillum indicum S5]
gi|316945884|gb|ADU65360.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfurispirillum indicum S5]
Length = 172
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 3/167 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
L FY+ + S ++ RN + SV L+ F+ AG+F LL AEF+ ++ ++VY G
Sbjct: 8 LVFYMLVVTILASGLAMIFTRNIVASVTCLVGTFLGVAGIFFLLNAEFIGVVQIMVYAGG 67
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+ + +F IM+ D + K + + + + ++V A + +S
Sbjct: 68 LSLLIIFAIMLTDPRDHEVDRPKSGNVMLAAAVSGILFIMMVIAISTAQWSFS---DAEP 124
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
IG +T Y P ++ +L +++ GAIVL + D K
Sbjct: 125 LTTQPAVYIGIQYFTNYIVPFYLAAILLSMALTGAIVLAKKEGEDEK 171
>gi|7649019|gb|AAF65737.1|AF228525_7 F420H2 dehydrogenase subunit FpoJ [Methanosarcina mazei Go1]
Length = 176
Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 2/163 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+++ F L + + + + VV ++ + + +LI AGL++LL A+F+ +I ++VY
Sbjct: 11 LETAVFGLLALVTVFFAIFVVIAKDVVRAGLALIMCMFGVAGLYILLNAQFLGVIQVLVY 70
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+GA+ V LF +M+ +I + R +F + +L ++V + ++ EL
Sbjct: 71 IGAIGVLILFAVMLTKREIGGGPVQINRPL--AFLVCLLFVAVVVTGAFGTSWNTVSELP 128
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+N+E IG +++T + P E+ +LL S+IGAI +
Sbjct: 129 ENPADPSNIEGIGMLIFTHFVAPFEVLSIVLLASLIGAIYMAK 171
>gi|332662322|ref|YP_004445110.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Haliscomenobacter hydrossis DSM 1100]
gi|332331136|gb|AEE48237.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Haliscomenobacter hydrossis DSM 1100]
Length = 165
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 88/165 (53%), Gaps = 1/165 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY+ S +AII + V RN +YSV SL+ F AG++L L AEFVA++ ++VY
Sbjct: 1 MDQVIFYILSTIAIIGALSTVVSRNAMYSVLSLVVTFFALAGIYLQLNAEFVAIVHIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF++MML+++ RK + + + + M +
Sbjct: 61 AGAIMVLFLFVVMMLNLNTVTVTIRKNP-LIKYLAVLVGIIMAALLGFASMNTALPIARG 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ V+ +GK+L+ +Y P E+ +L+ +M+G IVL +
Sbjct: 120 NTSAEVGTVKVLGKMLFNEYLLPFELISVLLIATMVGVIVLTKKE 164
>gi|15150748|ref|NP_150414.1| NADH dehydrogenase subunit 6 [Pylaiella littoralis]
gi|15147754|emb|CAC50855.1| NADH dehydrogenase subunit 6 [Pylaiella littoralis]
Length = 222
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + + + V + +NP+YS L+ F +G+ LLG EF+A++ L+V
Sbjct: 1 MVDHIIFLIITTLGVGLGIKVTSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+ V LF++MMLDI K+ L + ++ + + N
Sbjct: 61 YAGAIAVLVLFVVMMLDIKAIENPWSSKKISLVFYPGSLVLFCCLGWSYNVKEIGFLPSF 120
Query: 122 SRLVFKGNNVENI--------------------GKVLYTQYAYPLEISGFILLLSMIGAI 161
+ L VE++ +LY+ YA L I+G ILL++M+GAI
Sbjct: 121 T-LSLCKEKVESLYSSNNMWFVEFDSSCALNDPSYLLYSTYAILLIIAGVILLIAMVGAI 179
Query: 162 VLMLRHRRDIKRQDISKQLESNPDNSIVMVKVK 194
L L+ + + + +QL +++ +K K
Sbjct: 180 SLTLQKKSP---ESLYRQLGRESKHAVFSIKEK 209
>gi|145298715|ref|YP_001141556.1| NADH dehydrogenase subunit J [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851487|gb|ABO89808.1| NADH dehydrogenase I, J subunit [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 183
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L FY + +A+ S+ V++ NP++++ +LI + + A +F LGA F + ++VY G
Sbjct: 2 ELAFYAAALVAVYSTLRVISTSNPMHALLNLIISIIAVAMIFFCLGASFAGALQVIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ A+ +K + G A ++ +L
Sbjct: 62 AIMVLFVFVVMMLNLGSSEAQEKKWLTPMTW---GGPALLSLILLGFLAYGILGVTGGQL 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A L +
Sbjct: 119 GLSDVSAKEVGIALFGPYVLAVELASILLLAGLVTAYHLGREDKSG 164
>gi|320009162|gb|ADW04012.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
flavogriseus ATCC 33331]
Length = 223
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 2/160 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++ + VT + +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 19 EIAFLLVGLATFGAAVVTVTTKQLVHAALWLVVALGGIAVEYLLLTAEFIAWVQVLIYVG 78
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + AA +V + +L
Sbjct: 79 SVVVLLLFGLMLTRAPIGRSPDADSGNRWMALGASVPAAGALVWVVVDAFRTTWIDLDGP 138
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ + G+ L+ + P E +LL +++GAIVL
Sbjct: 139 AQ--GSTKASGEFLFRNWVLPFEALSVLLLAALVGAIVLS 176
>gi|164421017|ref|YP_001648538.1| NADH dehydrogenase subunit 6 [Iotrochota birotulata]
gi|158938947|gb|ABW83873.1| NADH dehydrogenase subunit 6 [Iotrochota birotulata]
Length = 183
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 61/177 (34%), Positives = 97/177 (54%), Gaps = 4/177 (2%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+FS I +V++ N ++SV I AF++A LF+ L +F+A+I L+VYVGA+ +
Sbjct: 7 VFSMSLIFXGIMVISALNSVHSVLWXIVAFISAXVLFIFLEVDFIALIFLIVYVGAIAIL 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS----RLV 125
FLF+IMML++ F IG++ ++ S++ V G S +
Sbjct: 67 FLFVIMMLNLTDLKGLLDMSNYMPAGFMIGLVVFFEVLIYSSWGVSDLSGGRSYFRWDFI 126
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
K N++ +G +LYT YAY ++ FILL++MIG IVL +IKRQ+ Q+
Sbjct: 127 EKVTNIQGLGCILYTDYAYLFILASFILLVAMIGVIVLTFSISAEIKRQEGFIQISR 183
>gi|330830053|ref|YP_004393005.1| NADH dehydrogenase I subunit J [Aeromonas veronii B565]
gi|328805189|gb|AEB50388.1| NADH dehydrogenase I, J subunit [Aeromonas veronii B565]
Length = 183
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L FY + +AI S+ V++ NP++++ +LI + + A +F LGA F + ++VY G
Sbjct: 2 ELAFYASALVAIYSTLRVISTSNPMHALLNLIISLIAVAMIFFCLGAAFAGALQVIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ A+ +K + +L+ L+ ++ ++ G +
Sbjct: 62 AIMVLFVFVVMMLNLGSAQAQEKKWLTPMTWGGPALLSLILLGFLAHGILGVTGGL---I 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL ++ A L +
Sbjct: 119 GVTEVTAKQVGVELFGPYVLAVELASILLLAGLVTAYHLGREEKSG 164
>gi|290958202|ref|YP_003489384.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces scabiei 87.22]
gi|260647728|emb|CBG70833.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces scabiei 87.22]
Length = 217
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ + VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 34 EIAFLLVGLVTFGAALVTVTTRQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 93
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + AA +V + +L
Sbjct: 94 SVVVLLLFGLMLTKAPIGRSPDADSGNRWAALTVAVAAAAALVWVVVDAFRTTWIDLDGP 153
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ E G+ L+ + P E +LL +++GAIVL + +
Sbjct: 154 AA--GSTEATGESLFQNWVLPFEALSVLLLAALVGAIVLSRKAKAGT 198
>gi|89095639|ref|ZP_01168533.1| NADH dehydrogenase subunit J [Bacillus sp. NRRL B-14911]
gi|89089385|gb|EAR68492.1| NADH dehydrogenase subunit J [Bacillus sp. NRRL B-14911]
Length = 174
Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ L F + A+ L++ + ++ V +L+F F++ AG+++LL AEF+A++ +++
Sbjct: 4 TGELLAFLGLAIAAVTGGILLINLEKVVHMVVALVFTFISIAGIYILLSAEFIAVVQVLI 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+ + LF IM+ E + + + LA + +++ +
Sbjct: 64 YSGAITIIMLFGIMLTRHHDESGQKAGRLR----RILLFLAILAFAFSVYIGIYNLDFPE 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
++ NN E IG L++++ P E++ +LL++++GAIVL + +
Sbjct: 120 QEVLLHENNTEQIGISLFSEFVIPFELTSVVLLVALVGAIVLSRKDDEET 169
>gi|268316804|ref|YP_003290523.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Rhodothermus
marinus DSM 4252]
gi|262334338|gb|ACY48135.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Rhodothermus
marinus DSM 4252]
Length = 170
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 88/168 (52%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ L F+L + AI ++ ++ RNP+ S L+ AGL+L L A F+ +I +++
Sbjct: 1 MIAQLLFFLLAVTAIAAALGMLIARNPVSSALWLVLNLFCIAGLYLTLQASFLGVIQVLI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAA--ELIVCASNFMVFSAEG 119
Y GA++V FLF+IM+L+++ + G + +F + ++ + V A V
Sbjct: 61 YAGAIMVLFLFVIMLLNLEALPHPRQIDWGKVLAFVVTMIVLAQLVYVVALGLDVLPTFV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L T+Y PL++ G +LL + IGA++L R
Sbjct: 121 ATPEQAAVTGSAQALGRELLTRYIMPLQVIGILLLAATIGAVMLAKRR 168
>gi|257852716|gb|ACV71370.1| NADH dehydrogenase subunit 6 [Siphonodon celastrineus]
Length = 180
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDISGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ + +
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDVFPRNAIDF 179
>gi|288817726|ref|YP_003432073.1| NADH dehydrogenase chain J [Hydrogenobacter thermophilus TK-6]
gi|288787125|dbj|BAI68872.1| NADH dehydrogenase chain J [Hydrogenobacter thermophilus TK-6]
gi|308751325|gb|ADO44808.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Hydrogenobacter thermophilus TK-6]
Length = 177
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 98/168 (58%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q + F LFS +A++SS VV + NP+Y + SL+ + + AG+F + GAE V + L++
Sbjct: 1 MIQWITFLLFSLLAVVSSLGVVLLPNPVYVILSLLSSLIAIAGVFFVAGAELVGALQLLI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPR--KKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
Y AV VF++F++ + + + + + G L + +L E+++ S + S +G
Sbjct: 61 YAVAVTVFYVFVLTAVPWEKALKKDSHYRVEGVLSFPILLLLYFEILIVFSLGVSASPKG 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
++ L K N E IG +L+++Y + E+ +LL+ MIGA+++ +
Sbjct: 121 QIKELSKKFGNTEVIGSILFSKYFFAFELVSLVLLIGMIGAVIIGRKE 168
>gi|117620263|ref|YP_856310.1| NADH dehydrogenase subunit J [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561670|gb|ABK38618.1| NADH-quinone oxidoreductase chain j [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 182
Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 83/166 (50%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L FY + +AI S+ V++ NP++++ +LI + + A +F LGA F + ++VY G
Sbjct: 2 ELAFYAAALVAIYSTLRVISTSNPMHALLNLIISLIAVAMIFFCLGASFAGALQVIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G+L+ L+ + ++ GE L
Sbjct: 62 AIMVLFVFVVMMLNLGSAQDQEKNWLTPTTWVGPGLLSLILLGFLAYGILGVTGGE---L 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A L +
Sbjct: 119 GLTDVSAKAVGIALFGPYVLAVELASILLLAGLVTAYHLGREDKSG 164
>gi|109156534|ref|YP_654295.1| NADH dehydrogenase subunit 6 [Rhodactis sp. CASIZ 171755]
gi|108515262|gb|ABF93375.1| NADH dehydrogenase subunit 6 [Rhodactis sp. CASIZ 171755]
Length = 203
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 24/197 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F+ + S +V++ +P++S+F LI FV +A LFLLLG +FVA++ L++YVGA+ +
Sbjct: 1 MLAFVIVGSGIMVISTLSPVHSIFWLIVVFVGSAVLFLLLGIDFVALMFLIIYVGAIAIL 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------------- 116
FLF+IM+L++ R + + I S
Sbjct: 61 FLFVIMLLNLTDFPPAFRWGGEADMTNYAPIGLTIGTFFFSEVASSWLIVGGPYAHRTSF 120
Query: 117 -------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ S + K +N+E +G++LY Y ++ FILL++MIG +VL
Sbjct: 121 WGERGGAWDLASSWFLMKYHNIEALGRILYIACYYLFILASFILLVAMIGGMVLTQEVGA 180
Query: 170 DI----KRQDISKQLES 182
++ K+Q+I Q
Sbjct: 181 EVGPLAKKQEIFLQTSR 197
>gi|223931106|ref|YP_002586968.1| NADH-plastoquinone oxidoreductase subunit 6 [Syntrichia ruralis]
gi|219562320|gb|ACL27651.1| NADH-plastoquinone oxidoreductase subunit 6 [Syntrichia ruralis]
Length = 193
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + F+L I+ S VV + N +YS F L F + L+ L A+FVA +++Y
Sbjct: 8 LHEIIFFLLEVGIILGSLGVVLLTNIVYSAFFLGLVFFCISILYFALNADFVAAAQILIY 67
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V +F +M+++ F+ L+ ++ + L
Sbjct: 68 VGAVNVLIVFAVMLINKPQSKKLFSFWTIGDKITFLVCLSLFFLLVTIILNTSWSSITLI 127
Query: 123 RLVFKG------NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
K NV+ IG +L TQ+ P E+ +LL+++IGAIV+ R
Sbjct: 128 TESKKFLNFDFTQNVQRIGYLLLTQFLLPFELLSIVLLVALIGAIVIARREN 179
>gi|257852718|gb|ACV71371.1| NADH dehydrogenase subunit 6 [Stackhousia minima]
Length = 180
Score = 88.2 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 84/176 (47%), Gaps = 13/176 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDISGLLLLLGLDFSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ ++ + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMLFILDNETIPLLPTQRNTTSLRYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLE 181
N+E +G +LYT Y+ + ILL++MIGAIVL + +KRQD+ ++
Sbjct: 121 WTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTHGAVKRQDVFRRNA 176
>gi|133900526|gb|ABO41429.1| NADH dehydrogenase subunit 6 [Pimelodendron zoanthogyne]
Length = 167
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 79/167 (47%), Gaps = 11/167 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRDTSGLLLLLGLDFSAMIFPVVYIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFK 127
I I R S IG++ + + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTQRNTTSLSYTVYAGKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
N+E +G +LYT Y + ILL++MIGAIVL + +KRQ
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQ 167
>gi|150017831|ref|YP_001310085.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Clostridium
beijerinckii NCIMB 8052]
gi|149904296|gb|ABR35129.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Clostridium
beijerinckii NCIMB 8052]
Length = 163
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F+ +F+ I + VV +N I+S S+I F+ A +F+LL A+F+A+ +++
Sbjct: 1 MISAFVFWPIAFLIIAFAIGVVYSKNIIHSALSMILTFIGIAVVFILLQADFLALAQILI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+ + +F IM+ + + + LI F+ +
Sbjct: 61 YAGAISILIVFAIMLTRKNDMKNSNPFNKLRWTGLAFCLGFFGLITRLILRSNFTYKN-- 118
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ N + I + Y P E+S +LL++++GAI+L
Sbjct: 119 ---LNIENTISAIADGFFGNYMIPFEVSALLLLIALVGAIILAK 159
>gi|257852702|gb|ACV71363.1| NADH dehydrogenase subunit 6 [Brunellia acutangula]
Length = 170
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 11/169 (6%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
NP++SV I F + +GL LLLG +F AMI VVY+GA+ V FLF++MM I I
Sbjct: 1 NPVHSVLFPIPVFRDTSGLLLLLGLDFFAMIFPVVYIGAIAVSFLFVVMMFHIQIAEIHE 60
Query: 87 RKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFKGNNVENIG 135
R S +G++ + + V N+E +G
Sbjct: 61 EVLRYLPVSGIMGLILWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRSWTNLETLG 120
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
+LYT Y+ +S ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 NLLYTYYSVWFLVSSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 169
>gi|193212952|ref|YP_001998905.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chlorobaculum
parvum NCIB 8327]
gi|193086429|gb|ACF11705.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chlorobaculum
parvum NCIB 8327]
Length = 173
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ FY+F+ + ++S+ VV +N IYS FSL+F F A L++ L A+F+A+ +VVYVG
Sbjct: 8 IIFYIFAAVTVVSAAFVVFSKNVIYSAFSLLFTFFGVAALYVFLSADFIAVTQVVVYVGG 67
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
++V LF +M + + + + L ++ G +
Sbjct: 68 ILVLLLFGVMFTNTIMSTELKADVMNMVPGVILLFLMIAGMLFTFYTGGGWMPGL---VQ 124
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+G+ VE+IG ++Y P E+ +LL++++GA L + K Q
Sbjct: 125 LQGSVVESIGMETMSRYMLPFEMVSIVLLVALLGAAYLARYDKAQNKEQ 173
>gi|226327873|ref|ZP_03803391.1| hypothetical protein PROPEN_01754 [Proteus penneri ATCC 35198]
gi|225203577|gb|EEG85931.1| hypothetical protein PROPEN_01754 [Proteus penneri ATCC 35198]
Length = 277
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ L+ + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYIAGLIAILATLRVITHTNPVHALLYLVISLIALSVVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V + +K + L + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGKSVVDQERKWLQPKFWIGPALLSLMLLVVLIYAI--SSVTHGEI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL +I A + D
Sbjct: 120 TGEIIGAKEVGISLFGPYILAVELASVLLLSGLIVAYHIGRDQSHD 165
>gi|322436011|ref|YP_004218223.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Acidobacterium sp. MP5ACTX9]
gi|321163738|gb|ADW69443.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Acidobacterium sp. MP5ACTX9]
Length = 174
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 86/170 (50%), Gaps = 2/170 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
MQ F +F+ +AI + ++ R+PI S SL+ ++ A L+ LGAEF+A ++VY
Sbjct: 1 MQLALFIIFAALAIAGALNLLLQRHPINSALSLVVVMMSLAVLYWTLGAEFLAAAQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI--GILAAELIVCASNFMVFSAEGE 120
GA++V F+F++M+L+ E + +L + V +
Sbjct: 61 AGAIMVLFVFVVMLLNAGEEERTTGSRAAYLAGVPGATAVFCLLSFVFLTESKAIGNATL 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L NN+ I +VL+T+ P E++ ++L++++GA+VL + +
Sbjct: 121 GGMLSGGVNNIAEISQVLFTRLLLPFEVTSVLILVAILGAVVLARKTEPE 170
>gi|256831788|ref|YP_003160515.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Jonesia
denitrificans DSM 20603]
gi|256685319|gb|ACV08212.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Jonesia
denitrificans DSM 20603]
Length = 282
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F+ + + ++++ ++ R +++ S++F ++ A L++ A F+ + +VV
Sbjct: 4 TAEAVLFWSLAPLMVLAAMGLLFARKAVHATISVVFVMISLAVLYVANEAPFLGIAQVVV 63
Query: 62 YVGAVIVFFLFIIMMLDI--DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
Y GA+++ FLF+IM++ + + E + + F+G F G LA L+ V G
Sbjct: 64 YTGAIMMLFLFVIMLVGVGASDSLVETVRGQRFIGVLFAGGLAIILLAFLGRLTVGPGVG 123
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISG 150
+ + I +VL + +PLE+ G
Sbjct: 124 HEATVADNPT---AIARVLLGNFVFPLELVG 151
>gi|308062553|gb|ADO04441.1| NADH dehydrogenase subunit J [Helicobacter pylori Cuz20]
Length = 182
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L + G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCTLSFGVALLLTLILSAPSIGENLSEQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N+E IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIEAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|83815364|ref|YP_445567.1| NADH dehydrogenase i, j subunit [Salinibacter ruber DSM 13855]
gi|83756758|gb|ABC44871.1| NADH dehydrogenase i, j subunit [Salinibacter ruber DSM 13855]
Length = 207
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ F+L + +A+ ++ ++ RNP+ S L+ AGL+L L A F+ +I ++V
Sbjct: 39 MAAPSMFFLLATVAVAAALGMIIARNPVSSALWLVLNLFCIAGLYLTLNASFIGVIQILV 98
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAEGE 120
Y GA++V FLF+IM+L++ + +G F +G +L ++L+ + +
Sbjct: 99 YAGAIMVLFLFVIMLLNLSALPELEEIEWASIGGFAVGLVLLSQLLYVVALQFELGVDPI 158
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + ++G++L+T+YA L+++G +LL + +GA++L R
Sbjct: 159 GAEAAAEAGSAASLGEILFTRYALHLQVAGILLLAATVGAVLLAQRR 205
>gi|154175162|ref|YP_001407453.1| NADH dehydrogenase subunit J [Campylobacter curvus 525.92]
gi|112803258|gb|EAU00602.1| transcriptional regulator, LuxR family [Campylobacter curvus
525.92]
Length = 177
Score = 87.8 bits (216), Expect = 7e-16, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 87/166 (52%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FYLFS +++ + V +N ++++ +L + LF LLGAEF+ ++ ++V
Sbjct: 1 MYEAIAFYLFSALSLGCFGVSVFSKNALHAMSALAGGMIFICALFFLLGAEFLGVVQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+V + F +M DI + E + + + A L+V + V
Sbjct: 61 YTGAVMVLYAFSMMFFDISRDANESYSLASKRLIYTLSVFIALLLVIVFSSPVIGQNLAA 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + N+E IG +L+ +Y E++ +LL++M+ IVL+ +
Sbjct: 121 QQSAQELGNIELIGLMLFGKYLIAFELTAIMLLVAMVAGIVLVHKK 166
>gi|319955926|ref|YP_004167189.1| NADH dehydrogenase subunit j [Nitratifractor salsuginis DSM 16511]
gi|319418330|gb|ADV45440.1| NADH dehydrogenase subunit J [Nitratifractor salsuginis DSM 16511]
Length = 186
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M++ FY F+ + + V +N +Y++ SL V +GLF +LGA+F+ ++ L+VY
Sbjct: 1 METFAFYFFAVLITALFLVTVLSQNILYAMTSLAAGMVLISGLFFILGADFLGVVQLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV+ + F +M D + E + G+ A L+V + + L
Sbjct: 61 VGAVMALYAFAMMFFDATGRIKERHSHPALVFLL-GGLTAVMLVVIFAAPQIGHNIQALF 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+N +G VL+T+Y P E++ +LL++MI I+L +
Sbjct: 120 PTADGMDNPHAVGLVLFTKYLVPFEVAAVMLLVAMIAGIILAGKKMERS 168
>gi|133900550|gb|ABO41441.1| NADH dehydrogenase subunit 6 [Sapria himalayana]
Length = 180
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRETSGLLLLLGLDFSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + + +
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFLLDNESIPLLPTQRKTTSLGYTVYAGNIRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
N+E +G +LYT Y + +LL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFVWFLVPSLLLLVAMIGAIVLTMHRTTHSAVKRQDLFRRNAIDF 179
>gi|239943532|ref|ZP_04695469.1| putative NADH dehydrogenase chain J [Streptomyces roseosporus NRRL
15998]
gi|239989986|ref|ZP_04710650.1| putative NADH dehydrogenase chain J [Streptomyces roseosporus NRRL
11379]
gi|291446999|ref|ZP_06586389.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces roseosporus NRRL
15998]
gi|291349946|gb|EFE76850.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces roseosporus NRRL
15998]
Length = 224
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 2/163 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ + VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 26 EIAFLLVGLATLGAAVITVTTRQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 85
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+++V LF +M+ I + + + + +A +V + +L
Sbjct: 86 SIVVLLLFGLMLTRAPIGRSPDADSGNRWVALGVALASAAALVWVVVDAFRTTWIDLDGP 145
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V G L+ + P E +LL +++GAIVL +
Sbjct: 146 AQGSTRVT--GAFLFRNWVLPFEALSVLLLAALVGAIVLSRKR 186
>gi|297192747|ref|ZP_06910145.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721066|gb|EDY64974.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces pristinaespiralis
ATCC 25486]
Length = 214
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + + ++ + VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 18 EIAFLLVGVVTLGAAVITVTTRQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 77
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + ++AA +V + +L
Sbjct: 78 SVVVLLLFGLMLTKAPIGRSPDADSGNRWVALAVAVVAAVSLVWVVVDAFRTTWIDLDGP 137
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
V G++L+ + P E +LL ++IGAIVL + +
Sbjct: 138 AQGSTKVS--GEILFRHWVLPFEALSVLLLAALIGAIVLSRKDGEE 181
>gi|65329286|gb|AAY42125.1| Nqo10 [Rhodothermus marinus]
Length = 170
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ L F+L + AI ++ ++ RNP+ S L+ AGL+L L A F+ +I +++
Sbjct: 1 MIAQLLFFLLAVTAIAAALGMLIARNPVSSALWLVLNLFCIAGLYLTLQASFLGVIQVLI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAA--ELIVCASNFMVFSAEG 119
Y GA++V FLF+IM+L+++ + G + +F + ++ + V A V
Sbjct: 61 YAGAIMVLFLFVIMLLNLEALPHPRQIDWGKVLAFVVTMIVLAQLVYVVALGLDVLPTFV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + +G+ L T+Y PL++ G +LL + IGA++L R
Sbjct: 121 ATTEQAAVTGSAQALGRELLTRYIMPLQVIGILLLAATIGAVMLAKRR 168
>gi|315587160|gb|ADU41541.1| NADH-ubiquinone oxidoreductase subunit J [Helicobacter pylori 35A]
Length = 184
Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 3 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 62
Query: 62 YVGAVIVFFLFIIMMLDI--DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
YVGAVIV + F +M + ++ + K SF + IL ++ S S +
Sbjct: 63 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCTLSFGVAILLTLILSAPSIGENLSKQV 122
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N+E IG VL+T Y P E + +LL++M+G I ++
Sbjct: 123 NSNAIDAQIPNIEAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 170
>gi|94968335|ref|YP_590383.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Candidatus
Koribacter versatilis Ellin345]
gi|94550385|gb|ABF40309.1| NADH dehydrogenase subunit J [Candidatus Koribacter versatilis
Ellin345]
Length = 166
Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 92/168 (54%), Gaps = 6/168 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F+ F+ + + ++ ++PI S SL+ + AGLFLL+GAEFV I ++V
Sbjct: 1 MLHEILFFFFAAGCVAGAINLLAQKHPINSALSLVVVMASLAGLFLLMGAEFVGAIQVIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA++V F+F+IM+L+ +E K + +G+ AA ++ +++ E
Sbjct: 61 YAGAIMVLFVFVIMLLNAGVEEHTKSSKI----AIVLGVPAAAIVATLITWILLHNEQSF 116
Query: 122 SRLVFKG--NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+++ + IG +L+ Y P E++ ++L+ ++GA+VL +
Sbjct: 117 TKVSIGELHGTGKEIGMLLFGPYLLPFEVTSVLVLIGIMGAVVLARKE 164
>gi|255533954|ref|YP_003094326.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pedobacter
heparinus DSM 2366]
gi|255346938|gb|ACU06264.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pedobacter
heparinus DSM 2366]
Length = 165
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY + +++I S LV+ +NP++SV LI F ++LL A+F+A++ +VY
Sbjct: 1 MGTSVFYFVAALSVIFSLLVIFSKNPVHSVLYLIVTFFTFTVHYVLLNAQFLAVVNFIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+GA++V FLF++M+L+++ + + + G + A S L
Sbjct: 61 MGAIMVLFLFVLMLLNLNKDNEPLKSGLVKVVGVIAGCCLLVTLAGALKATALSDPVVLR 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
V+++GK L+ + P E+ +LL +M+GAI+L + +
Sbjct: 121 NP--NLGLVKSLGKELFGPFMLPFELCSILLLSAMVGAILLTKKEK 164
>gi|255037785|ref|YP_003088406.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Dyadobacter
fermentans DSM 18053]
gi|254950541|gb|ACT95241.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Dyadobacter
fermentans DSM 18053]
Length = 173
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+++ FY+FS + +++ ++ RN IY F+L AF+ A L++L GA+F+A+ +++Y
Sbjct: 1 MEAIIFYIFSALTLLAGLFILVSRNLIYGAFALFLAFLGVAALYVLAGADFLAVSQIMIY 60
Query: 63 VGAVIVFFLFIIMMLDI----DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
VG ++V +F IM+ D R + + ++ S
Sbjct: 61 VGGILVLLIFGIMLTQKREKSDDSTRHNRVDVPITRRIWGVLAGVGFFGLLVKVILSSDF 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + + IG L T + P E++ +LL+++IGA L L
Sbjct: 121 AMAGAEMSTKSTIRTIGVELMTSHLLPFEVAAILLLVALIGAAYLALNRNP 171
>gi|296133531|ref|YP_003640778.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermincola
sp. JR]
gi|296032109|gb|ADG82877.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermincola
potens JR]
Length = 164
Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ F++ + + + S+ ++V RN +S +I F+ A +L+L A+F+A + ++VY G
Sbjct: 2 TIMFWVIAIITLGSALMMVMNRNIFHSALFMIVTFIGVAATYLMLQADFMAAVQVLVYGG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A+ +F +F IM+ ++ F + + A ++ + MV +S
Sbjct: 62 AIAIFVVFGIMLTQRGDM----KQSNLFSKHAPLAAIVALALIVINGVMVLKTNWAVSNA 117
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
V I +++ +Y P E++ +LL+++IGA+++ ++
Sbjct: 118 APPTETVGPIAELMLQKYVIPFEVAAILLLVALIGAVIIAKEVKKTS 164
>gi|317011469|gb|ADU85216.1| NADH dehydrogenase subunit J [Helicobacter pylori SouthAfrica7]
Length = 182
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV--FSAEG 119
YVGAVIV + F +M + EV E ++ L G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQNPKILCILSFGVALLLTLILSAPSISENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NPNAIDAQIPNIKAIGYVLFTDYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|148243378|ref|YP_001228535.1| NADH dehydrogenase subunit J [Synechococcus sp. RCC307]
gi|147851688|emb|CAK29182.1| NAD(P)H-quinone oxidoreductase chain 6 [Synechococcus sp. RCC307]
Length = 199
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 2/165 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ Q + F + + ++ + VV + N +Y+ F L F++ AGL+L+L A F+A +++
Sbjct: 7 ITQLIVFGVLALAVVVGALGVVMLPNIVYAAFLLGGVFLSVAGLYLMLNASFIAAAQILI 66
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V LF IM+++ + + L +
Sbjct: 67 YVGAVNVLILFAIMLVNKKEAMGASPGVGLRRVLSTG--VCIGLFALLLRVAFSTPWATP 124
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ V +G+ ++ Y P E++ +LL++MIGAIVL R
Sbjct: 125 GPAAIGEDAVIRLGEHFFSDYLLPFELASVLLLMAMIGAIVLARR 169
>gi|317178012|dbj|BAJ55801.1| NADH dehydrogenase subunit J [Helicobacter pylori F16]
Length = 182
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L + G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCALSFGVALLLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N+E IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDVQIPNIEAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|145219894|ref|YP_001130603.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Prosthecochloris vibrioformis DSM 265]
gi|145206058|gb|ABP37101.1| NADH dehydrogenase subunit J [Chlorobium phaeovibrioides DSM 265]
Length = 173
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 3/147 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ FYLF+ + + S+ VV RN IYS FSL+F F A L++ L A+F+A+ +VVYVG
Sbjct: 7 TVIFYLFAAITVFSAAFVVFSRNVIYSAFSLLFTFFGIAALYVFLSADFIAVTQVVVYVG 66
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V LF +M + + + K L + L ++ + S
Sbjct: 67 GILVLLLFGVMFTN---NIMDTDLKTDVLHAIPGTFLFLGILAALLFTFYTTNGWMPSDT 123
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGF 151
+G+ VE IG ++Y P E++
Sbjct: 124 QLQGSVVERIGFETMSRYVLPFEMASI 150
>gi|308064047|gb|ADO05934.1| NADH dehydrogenase subunit J [Helicobacter pylori Sat464]
Length = 182
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L + G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCTLSFGVALLLTLILSAPSIGENLSNQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|107736864|ref|YP_626491.1| NADH dehydrogenase subunit 6 [Discosoma sp. CASIZ 168915]
gi|107736891|ref|YP_626504.1| NADH dehydrogenase subunit 6 [Discosoma sp. CASIZ 168916]
gi|99866575|gb|ABF67623.1| NADH dehydrogenase subunit 6 [Discosoma sp. CASIZ 168915]
gi|99866589|gb|ABF67636.1| NADH dehydrogenase subunit 6 [Discosoma sp. CASIZ 168916]
Length = 204
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 25/198 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F+ + S +V++ +P++S+F LI FV +A LFLLLG +FVA++ L++YVGA+ +
Sbjct: 1 MLAFVIVGSGIMVISTLSPVHSIFWLIVVFVGSAALFLLLGVDFVALMFLIIYVGAIAIL 60
Query: 70 FLFIIMMLDIDIE---VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS---------- 116
FLF+IM+L++ + IG+
Sbjct: 61 FLFVIMLLNLTDFLPAFRWGGGEADMTNYAPIGLTIGTFFFSEVASSWLIVGGPYAHRTS 120
Query: 117 --------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ S + K +N+E +G++LY Y ++ ILL++MIG IVL
Sbjct: 121 FWGERGGAWDLASSWFLMKYHNIEALGRILYIACYYLFILASLILLVAMIGGIVLTQEVG 180
Query: 169 RDI----KRQDISKQLES 182
++ K+Q+I Q
Sbjct: 181 AEVGPLAKKQEIFLQTSR 198
>gi|49147174|ref|YP_025767.1| NADH dehydrogenase subunit 6 [Pseudendoclonium akinetum]
gi|33439189|gb|AAQ18726.1| NADH dehydrogenase subunit 6 [Pseudendoclonium akinetum]
Length = 203
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +F + I S+ VV NP+Y+V LI AF NA+ L LL G +++A + +V+YVGA
Sbjct: 3 LFIIFCALLIASALFVVQCNNPVYAVLFLILAFFNASALTLLAGHDYLAALLIVLYVGAT 62
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
FFLF IM+L+I I ++ + S IGI+ A + + L+
Sbjct: 63 CTFFLFAIMILNIQIAEISEKRLKLAPISAIIGIILALQLETIVASFESPIVMDYLPLIS 122
Query: 127 KGN---------------NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ + +G +LYT YA L ++ ILL +MIG+I L L
Sbjct: 123 SIDSSGPEGVALLIDTSTQIYGLGAILYTHYASFLILASLILLSAMIGSISLTLSKGTGN 182
Query: 172 KRQDISKQLESNPDNSI 188
RQ + +Q + ++
Sbjct: 183 LRQQVFQQNIRDFKQTV 199
>gi|108563638|ref|YP_627954.1| NADH dehydrogenase subunit J [Helicobacter pylori HPAG1]
gi|107837411|gb|ABF85280.1| NADH-ubiquinone oxidoreductase chain J [Helicobacter pylori HPAG1]
Length = 182
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDI--DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
YVGAVIV + F +M + ++ + K SF + IL ++ S S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCTLSFGVAILLTLILSAPSIGENLSNQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|172072939|ref|YP_001806700.1| NADH dehydrogenase subunit 6 [Cryptomeria japonica]
gi|221272319|sp|B1VKI7|NU6C_CRYJA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|171854958|dbj|BAG16698.1| NADH-plastoquinone oxidoreductase subunit 6 [Cryptomeria japonica]
gi|239794326|dbj|BAH73323.1| NADH-plastoquinone oxidoreductase subunit 6 [Cryptomeria japonica]
gi|239794409|dbj|BAH73405.1| NADH-plastoquinone oxidoreductase subunit 6 [Cryptomeria japonica]
Length = 180
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 16 IISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIM 75
I VV + N IYS SL + + +++L A+FVA+ +++Y+GAV + LF +M
Sbjct: 20 IFGGIGVVLLTNIIYSALSLGLVLICISFFYIILNADFVAVAQILIYIGAVNILILFAVM 79
Query: 76 MLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GN 129
+++ I + + + L++ + N
Sbjct: 80 LMNNPKYPNYAPPWTVGDSISSIVCTSLFCSLITIILNISWFGISLTQKSDQMLERDLTN 139
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
N++ IG L T + P E+ ILL+++IGAI + R
Sbjct: 140 NIQRIGAHLSTDFFLPFELISIILLVALIGAITIARREET 179
>gi|317182518|dbj|BAJ60302.1| NADH dehydrogenase subunit J [Helicobacter pylori F57]
Length = 182
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASNMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L + G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCALSFGVALLLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N+E IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDVQIPNIEAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|297380449|gb|ADI35336.1| NAD(P)H-quinone oxidoreductase chain 6 [Helicobacter pylori v225d]
Length = 182
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L + G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCTLSFGVALLLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|302553483|ref|ZP_07305825.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces viridochromogenes
DSM 40736]
gi|302471101|gb|EFL34194.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces viridochromogenes
DSM 40736]
Length = 209
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ + VT R +++ L+ A +LLL AEF+A + +++YVG
Sbjct: 17 EIAFLLVGLVTFGAAIVTVTTRQLVHAALWLVVTLGGLAVEYLLLTAEFIAWVQVLIYVG 76
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + AA +V + +L
Sbjct: 77 SVVVLLLFGLMLTRAPIGRSPDADSGNRWAALTVAVAAAAALVWVVVDAFRATWIDLDGP 136
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ E G L+ + P E +LL +++GAIVL + +
Sbjct: 137 AA--GSTEATGASLFQNWVLPFEALSVLLLAALVGAIVLSRKAK 178
>gi|153807447|ref|ZP_01960115.1| hypothetical protein BACCAC_01727 [Bacteroides caccae ATCC 43185]
gi|149129809|gb|EDM21021.1| hypothetical protein BACCAC_01727 [Bacteroides caccae ATCC 43185]
Length = 170
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + I S + VT + + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAAFIIAMSIMTVTTQRIVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + AE K+ F F + A +I+ + + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRAEKLKRSRFFAGLFTMVAGAAIILFIT---LKHNFLQT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
+ L + N+ +IG L + Y P E +LL +IG I++ +
Sbjct: 121 NNLAPQEINIHSIGHALLSSDKYGYILPFEAVSILLLACIIGGIMIARKR 170
>gi|223936523|ref|ZP_03628434.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [bacterium
Ellin514]
gi|223894687|gb|EEF61137.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [bacterium
Ellin514]
Length = 191
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 4/169 (2%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F + + + ++S +++RN ++ SL F A ++L L A+FV ++VY+GA
Sbjct: 3 ITFAIIAALTLVSGIAAMSLRNLVHCALSLAITFAGLAAMYLQLDAQFVGFAQILVYIGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V + +F I++ + +G + +I ++ +
Sbjct: 63 VAILIVFAILLTRSSEAPQPVISRSWIVGIAIAVAVFGVMIRLIASSPIAQRGWPEKP-- 120
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
G V+ IG L T++ PLE G +L ++ IGA+++ + + Q
Sbjct: 121 --GPTVKQIGDQLMTRFVLPLEAMGLLLTVATIGAVIIAMNEKTKAGLQ 167
>gi|290489842|gb|ADD31328.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Antirrhinum
majus]
Length = 178
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 8/171 (4%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ S VV NPIYS FSL + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGSLGVVLFPNPIYSAFSLGLVLFCISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG-----SFFIGILAAELIVCASNFMVFSA 117
VGA+ V +F +M ++ + +G + + L
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYDYEDFQPWTVGDGVTSIVCTSLFISLLTTIPDTSWYGIV 126
Query: 118 EGELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 WTTKSNQILEQDLISNSQQIGIHLATDFFLPFELISIILLVALIGAISIAR 177
>gi|332674072|gb|AEE70889.1| NADH-ubiquinone oxidoreductase [Helicobacter pylori 83]
Length = 184
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 3 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L + G+ ++ ++ + S +
Sbjct: 63 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCALSFGVAILLTLILSAPSIGENLSNQV 122
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 123 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 170
>gi|317180995|dbj|BAJ58781.1| NADH dehydrogenase subunit J [Helicobacter pylori F32]
Length = 182
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L + G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCALSFGVAILLTLILSAPSIGENLSNQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|210135428|ref|YP_002301867.1| NADH dehydrogenase subunit J [Helicobacter pylori P12]
gi|210133396|gb|ACJ08387.1| NADH-ubiquinone oxidoreductase chain J [Helicobacter pylori P12]
Length = 182
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQNPKILCVLSFGVALLLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|217033590|ref|ZP_03439018.1| hypothetical protein HP9810_899g26 [Helicobacter pylori 98-10]
gi|216943936|gb|EEC23370.1| hypothetical protein HP9810_899g26 [Helicobacter pylori 98-10]
gi|261838592|gb|ACX98358.1| NADH-ubiquinone oxidoreductase chain J [Helicobacter pylori 51]
gi|317178437|dbj|BAJ56225.1| NADH dehydrogenase subunit J [Helicobacter pylori F30]
Length = 182
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDI--DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
YVGAVIV + F +M + ++ + K SF + IL ++ S S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCTLSFGVAILLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|188528058|ref|YP_001910745.1| NADH dehydrogenase subunit J [Helicobacter pylori Shi470]
gi|188144298|gb|ACD48715.1| NADH dehydrogenase subunit J [Helicobacter pylori Shi470]
Length = 182
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L + G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCTLSFGVALLLTLILSAPSIGENLSNQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDVQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|296274185|ref|YP_003656816.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Arcobacter
nitrofigilis DSM 7299]
gi|296098359|gb|ADG94309.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Arcobacter
nitrofigilis DSM 7299]
Length = 171
Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 1/168 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F SFMAI ++ + P+Y+ L+ + ++ +GLF LL A F+ M+ ++VY
Sbjct: 1 MTDILFIGLSFMAIAGGLTMLIHKQPMYAALGLLISILSVSGLFALLSATFLFMVQIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++ LFI+M L+ID K+ I+ L + + + ++S
Sbjct: 61 AGAIMTLLLFILMFLNIDEHDLPKEPKKVRN-IIIGAIVMLPLNIVILTAVSALPKKDMS 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ ++ IG +LY + E+ +LL++++GAIVL R +
Sbjct: 120 IIETNFGGIKEIGMLLYQNWLISFELISILLLVALVGAIVLAKRKKTR 167
>gi|163781770|ref|ZP_02176770.1| NADH dehydrogenase I chain J [Hydrogenivirga sp. 128-5-R1-1]
gi|159882990|gb|EDP76494.1| NADH dehydrogenase I chain J [Hydrogenivirga sp. 128-5-R1-1]
Length = 177
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ + F +FS AIIS V+T NPIY + L+ A + AG+F GAE V + L++
Sbjct: 1 MVRLVIFLIFSAWAIISGVGVITFTNPIYVILWLLSALIAVAGIFFTAGAELVGALQLLI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPR--KKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
Y A+ VF++F++ + + + + + G L + +L E+ + + S EG
Sbjct: 61 YAVAIAVFYVFVLTAVPWEKAIKKGSHYRMEGVLSLPLVVLLYVEMAIVFFLGITASPEG 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + K N E +G +L+T+Y + E+ +LL+ MIGA+++ +
Sbjct: 121 KFRAFIEKLGNTEVVGSILFTRYFFAFEVVSLVLLIGMIGAVLIGRKE 168
>gi|239929558|ref|ZP_04686511.1| NADH dehydrogenase I chain J [Streptomyces ghanaensis ATCC 14672]
gi|291437884|ref|ZP_06577274.1| NADH dehydrogenase I chain J [Streptomyces ghanaensis ATCC 14672]
gi|291340779|gb|EFE67735.1| NADH dehydrogenase I chain J [Streptomyces ghanaensis ATCC 14672]
Length = 255
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ + VT + +++ L+ A +LLL AEF+A + +++YVG
Sbjct: 31 EIAFLLVGLVTFGAAVVTVTTKQLVHAALWLVVTLGGLAVEYLLLTAEFIAWVQVLIYVG 90
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+VIV LF +M+ I + + + + AA +V + +L
Sbjct: 91 SVIVLLLFGLMLTRAPIGRSPDADSGNRWVALAVAVAAAAALVWVVVDAFRTTWIDLDGA 150
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+V G L+ + P E +LL +++GAIVL +
Sbjct: 151 PAGSTDVT--GASLFQHWVLPFEALSVLLLAALVGAIVLSRK 190
>gi|238927263|ref|ZP_04659023.1| NADH dehydrogenase (ubiquinone) subunit J [Selenomonas flueggei
ATCC 43531]
gi|304437253|ref|ZP_07397213.1| NADH-quinone oxidoreductase subunit J [Selenomonas sp. oral taxon
149 str. 67H29BP]
gi|238884850|gb|EEQ48488.1| NADH dehydrogenase (ubiquinone) subunit J [Selenomonas flueggei
ATCC 43531]
gi|304369745|gb|EFM23410.1| NADH-quinone oxidoreductase subunit J [Selenomonas sp. oral taxon
149 str. 67H29BP]
Length = 164
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S FY + + II + VV N ++S L+ +F+ A ++ +GAEF+ + L+VY G
Sbjct: 2 SFIFYFLAAVTIIGALGVVLSPNVVHSALFLVLSFIGVAAIYFYIGAEFLGAVQLMVYSG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV V + IM+ D ++ F + + + ++ +
Sbjct: 62 AVAVLIVMAIMLTRRDSMAQSNPSQKLFRRVVTGLLAGSIFFLIGCGIVLAPLP---AGE 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ I +++ Y P E++ +LL +M+GA++L
Sbjct: 119 FAASTGADEIAQLMLGTYLVPFEVTAVLLLAAMVGALLLAR 159
>gi|308183379|ref|YP_003927506.1| NADH dehydrogenase subunit J [Helicobacter pylori PeCan4]
gi|308065564|gb|ADO07456.1| NADH dehydrogenase subunit J [Helicobacter pylori PeCan4]
Length = 182
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L + G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCALSFGVAILLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|133900542|gb|ABO41437.1| NADH dehydrogenase subunit 6 [Rafflesia pricei]
Length = 181
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F +GL LLLG + AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRETSGLLLLLGLDLSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILYKETLPLLPTQRKTTSLRYTVYAEKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
++E +G +LYT Y + +LL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTHLETLGNLLYTYYFVWFLVPSLLLLVAMIGAIVLTMHRTTHSAVKRQDLFRRNAIDF 179
>gi|225166014|ref|ZP_03727763.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Opitutaceae
bacterium TAV2]
gi|224799739|gb|EEG18219.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Opitutaceae
bacterium TAV2]
Length = 177
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M SLFFY+FS +A+ VV +N + S L+ V+ AG+F+LL A +A++ + VY
Sbjct: 1 MSSLFFYVFSTLALACGLGVVFNKNTVTSALCLLGVLVSLAGIFVLLEAFLLAVLLIFVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV+ FLFI+M+ D R + L + I A L+ + + ++
Sbjct: 61 AGAVVALFLFIVMLTDAAGGGGGKRFSKTTLVA--GLISAVLLLAALYSIYAHGSFDTIA 118
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
G +++ G+ L+T Y P++I GF+LL++M+G IV+ +
Sbjct: 119 PAASVGASLKTYGRELFTTYLLPVQIVGFLLLIAMLGVIVISKK 162
>gi|302035617|ref|YP_003795939.1| NADH-quinone oxidoreductase membrane subunit J [Candidatus
Nitrospira defluvii]
gi|300603681|emb|CBK40012.1| NADH-quinone oxidoreductase, membrane subunit J [Candidatus
Nitrospira defluvii]
Length = 174
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 91/173 (52%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M +FF F+ ++I++ L V ++NP+ +L+ ++ +GLF+LL AEF+ + ++VY
Sbjct: 1 MAFVFFAYFAVVSIVAGILTVALKNPVQCGLALLALLLHVSGLFVLLNAEFLWAVQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V +LF++M+L++ + K +L + + LA L + + S +
Sbjct: 61 AGAILVLYLFVLMLLNLKTDDRYFHAKAPYLLAPAVIGLAYLLFLLVRSPFGGSRGDAST 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + IG +++ Y EI G L +++GAIVL + R+D
Sbjct: 121 AAILINGDAHAIGIKMFSDYLLQFEIIGVFLTGAIVGAIVLAKTPKSIETRRD 173
>gi|251799768|ref|YP_003014499.1| NADH dehydrogenase subunit J [Paenibacillus sp. JDR-2]
gi|247547394|gb|ACT04413.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Paenibacillus
sp. JDR-2]
Length = 171
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/163 (29%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ F++FS + II + L+V+++ ++ V S+ F+ AG+F+LL AEFVA + +++Y
Sbjct: 9 EFATFFIFSAIMIIGAVLMVSLQKVVHMVISMAAVFLGLAGMFVLLDAEFVAFVQVLIYA 68
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV + +F IMM + + A+P K + + ++ A F +
Sbjct: 69 GAVSILMIFGIMMTNHQNKQADPVKPLHETLAAVGALCLFGILFYAIRTTDF---PDAQP 125
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
L +N +IG++LYT Y P E+ +L ++ IGAI + +
Sbjct: 126 LQAVEDNTSSIGQLLYTGYVVPFELLSVLLTVAFIGAIAIAKK 168
>gi|226227059|ref|YP_002761165.1| NADH-quinone oxidoreductase chain J [Gemmatimonas aurantiaca T-27]
gi|226090250|dbj|BAH38695.1| NADH-quinone oxidoreductase chain J [Gemmatimonas aurantiaca T-27]
Length = 168
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 3/156 (1%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
S +AI S+ L VT +NP+ + L+ AGL+++L A FV I ++VY GA++V F+
Sbjct: 13 SLLAIASALLFVTRKNPVPAALWLVNVMFALAGLYVMLDAPFVGTIQVLVYAGAIMVTFV 72
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
F++M+L++ + LG+ + ++ + + N V
Sbjct: 73 FVVMLLNLGKTEVSDIRS---LGTRLGSGVVGLALLANLLLALRQHIEVPEFSAARDNVV 129
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
E + L+T Y E++ +LL+++IGA+VL R
Sbjct: 130 EPVAAALFTDYLVAFELTSLVLLVAVIGAVVLAKRR 165
>gi|21673602|ref|NP_661667.1| NADH dehydrogenase I, subunit 6 [Chlorobium tepidum TLS]
gi|21646716|gb|AAM72009.1| NADH dehydrogenase I, subunit 6 [Chlorobium tepidum TLS]
Length = 173
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ FY+F+ + ++S+ VV +N IYS FSL+F F A L++ L A+F+A+ +VVYVG
Sbjct: 7 AIIFYIFAAVTVLSAAFVVFSKNVIYSAFSLLFTFFGVAALYVFLSADFIAVTQVVVYVG 66
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V LF +M + + + + +L ++ GE+
Sbjct: 67 GILVLLLFGVMFTNTIMSTELKADVLNVVPGILLTLLLIVGMLFTFYTTGSWMPGEMQ-- 124
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
G+ V++IG ++Y P E+ +LL++++GA L + + K
Sbjct: 125 -LNGSVVQSIGLETMSRYMLPFEMFSIVLLVALLGAAYLARYDKANKK 171
>gi|297625181|ref|YP_003706615.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Truepera
radiovictrix DSM 17093]
gi|297166361|gb|ADI16072.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Truepera
radiovictrix DSM 17093]
Length = 184
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
L F+L + + ++ + V+T+R P+++ +L+ + A ++ L A F+A I ++VY GA
Sbjct: 2 LTFFLLAAVMVLGALGVITLRQPVHAALALVGTLLTLAVTYVTLQAHFLAAIQVIVYAGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-AEGELSRL 124
++V FLF+IM+L+++ + R ++ G++AA + + + ++
Sbjct: 62 IMVLFLFVIMLLNVEGDEGTVRLAWVRPAAYLTGVVAAAGVALTAFLDARQLPDAQVITA 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
G +G VL+ Q+ ++ G +LL ++GA+ L+ R R+ +++ + E
Sbjct: 122 ALAGGGAGALGGVLFNQFVLAFQLVGVLLLTGIVGAVSLVERSAREKGDEEVFGEPERE 180
>gi|42525211|ref|NP_970591.1| NADH dehydrogenase I chain J [Bdellovibrio bacteriovorus HD100]
gi|39577422|emb|CAE81245.1| NADH dehydrogenase I chain J [Bdellovibrio bacteriovorus HD100]
Length = 178
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 5/172 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F+ +F+ + S V+ + NPIYS L V + LF+ L A F+A + L+
Sbjct: 1 MTADAFLFWFLAFVTLASGLSVILMSNPIYSALCLAMTMVGISALFVTLNAYFIAGVQLI 60
Query: 61 VYVGAVIVFFLFIIMMLDI--DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
VY GAV+V F +IM+ D+ D++ K G + +G+ A ++ + + E
Sbjct: 61 VYAGAVMVLFTMVIMLFDLKKDVQAFTRGKFTGVVKIASVGLFAGLVVGAIAMSVNLMGE 120
Query: 119 GELSRLVFKGNNVE---NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V G +E +G++L+T+Y + E G +LL+ +GA+ L
Sbjct: 121 KTTDNPVLVGTGMESTKALGQILFTKYIFGFEALGVLLLVIAVGAVALARSK 172
>gi|304407743|ref|ZP_07389394.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Paenibacillus
curdlanolyticus YK9]
gi|304343226|gb|EFM09069.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Paenibacillus
curdlanolyticus YK9]
Length = 173
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 1/164 (0%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F++ S + I S L+V+ ++ V SL F+ G+F++L AEF+A + +++Y
Sbjct: 9 EFVAFFVLSVLMITGSVLMVSFTKVVHMVLSLAAVFLGVGGMFIMLDAEFLAFVQVLIYA 68
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV + +F IMM + E K + I L+ F+ +
Sbjct: 69 GAVSILMIFGIMMTNHQEASGESVKPLRETLAAVAAIALFGLLFFVIQAADFTDTSGAAP 128
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
N + IG++L+ Y P E+ +L ++ IGAIVL +
Sbjct: 129 PPAADNTL-AIGELLFHGYIVPFELVSVLLTVAFIGAIVLARKE 171
>gi|254779812|ref|YP_003057918.1| NADH dehydrogenase subunit J [Helicobacter pylori B38]
gi|254001724|emb|CAX29955.1| NADH-ubiquinone oxidoreductase, NQO10 subunit [Helicobacter pylori
B38]
Length = 182
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCILSFGVALLLTLILSAPSIGENLSNQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|312890387|ref|ZP_07749924.1| NADH dehydrogenase subunit J [Mucilaginibacter paludis DSM 18603]
gi|311297157|gb|EFQ74289.1| NADH dehydrogenase subunit J [Mucilaginibacter paludis DSM 18603]
Length = 165
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 95/165 (57%), Gaps = 2/165 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY +F++I+ + LV+ +NP++SV LI F ++LL A+F+A++ +VY+GA+
Sbjct: 3 LFYFVAFLSILFALLVIFSKNPVHSVLYLILTFFTFTIHYILLNAQFLAIVNFIVYMGAI 62
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V FLF++M+L+++ + + + G LI A++F V ++
Sbjct: 63 MVLFLFVLMLLNLNEDSEPVKTSMVKFAAIIGG--GCLLITLAASFKVVHPSSVVALTND 120
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
V+N+GKVL+ ++ P E+S +L +M+GA++L + + ++
Sbjct: 121 NLGLVKNLGKVLFNEFLLPFEVSSLLLFSAMVGAVLLATKDKSNV 165
>gi|299830440|ref|YP_003734811.1| NADH dehydrogenase subunit 6 [Pythium ultimum]
gi|299830499|ref|YP_003734870.1| NADH dehydrogenase subunit 6 [Pythium ultimum]
gi|269810817|gb|ACZ43846.1| NADH dehydrogenase subunit 6 [Pythium ultimum]
gi|269810876|gb|ACZ43905.1| NADH dehydrogenase subunit 6 [Pythium ultimum]
gi|269812130|gb|ACZ44428.1| NADH dehydrogenase subunit 6 [Pythium ultimum]
gi|269812189|gb|ACZ44487.1| NADH dehydrogenase subunit 6 [Pythium ultimum]
Length = 213
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/212 (29%), Positives = 110/212 (51%), Gaps = 18/212 (8%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++FF+ FS +A+ S+ V+ N IYS F LI FVN+ GL L+ EF++++ ++
Sbjct: 1 MNFETIFFFFFSSIALTSAIFVIYSTNTIYSAFFLILVFVNSTGLLLISEIEFISIMLII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAE---------------- 104
+YVGA+ V FLF+IMMLDI++ + + I
Sbjct: 61 IYVGAITVLFLFVIMMLDINVLIDKNNNNNFGYLPIIFLISFVFFLETFVMFSKIFTTYY 120
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
++ S F ++ + N+E IG++LY+ YA+ +G ILL+++IGA+ L
Sbjct: 121 HLIEQSFFKNDLFYNQVIYQLDNITNIETIGQILYSYYAFFFLAAGIILLIALIGAVTLT 180
Query: 165 LRHRR--DIKRQDISKQLESNPDNSIVMVKVK 194
+ ++ + +++ KQL N ++ +K K
Sbjct: 181 KKEKKKQNFLTKNLYKQLSRNSLQAVFNIKNK 212
>gi|152990047|ref|YP_001355769.1| NADH dehydrogenase subunit J [Nitratiruptor sp. SB155-2]
gi|151421908|dbj|BAF69412.1| NADH-quinone oxidoreductase, chain J [Nitratiruptor sp. SB155-2]
Length = 184
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 96/185 (51%), Gaps = 1/185 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++++ FYLF+ + I + V +N +YS+ +L V + F LL A+F+ ++ ++V
Sbjct: 1 MVEAIAFYLFAALTIFMFAVTVMSKNALYSMSALAAGMVFISAFFFLLDADFLGVVQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M +D +V E + + F G++A L++ +V L
Sbjct: 61 YGGAVMALYAFAMMFMDTTKDVKEKNPSKKIVF-FLSGMVALLLVIILLTPIVSDKVQAL 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
+ + N E +G VL+T+Y P E++ +LL++MI I+L + + I +++E
Sbjct: 120 YPVSDEVGNAEAVGIVLFTKYLVPFELAAVMLLVAMIAGIILASKRMDESITLKIDQEIE 179
Query: 182 SNPDN 186
Sbjct: 180 EKAGK 184
>gi|90200379|ref|NP_777467.2| NADH dehydrogenase subunit 6 [Anthoceros formosae]
Length = 197
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 6/185 (3%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+FF I S VV + N +YS F L FV + L+LLL A+FVA +++YVG
Sbjct: 9 EVFFVFIELGLIFGSLGVVFLTNIVYSAFLLGLVFVCISFLYLLLDADFVATAQILIYVG 68
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV + +F +M+++ + I + ++ + + +
Sbjct: 69 AVNILIVFAVMLINKPQSLQFLPSWTVGDTITLILCTSLFFLLISMILSISWSNIFSIAQ 128
Query: 125 VFKGNN------VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
K V+ IG L + P E+ +LL+++IGAI + R ++ +++ +
Sbjct: 129 SNKIGEQVLKSSVQGIGSSLLIDFLLPFELLSIVLLVALIGAITIARREKKVKLQKNRTL 188
Query: 179 QLESN 183
Q+ +
Sbjct: 189 QVTKD 193
>gi|182436713|ref|YP_001824432.1| putative NADH dehydrogenase chain J [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178465229|dbj|BAG19749.1| putative NADH dehydrogenase chain J [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 228
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 2/167 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + + ++ + VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 36 EIAFLLVGLVTLGAAVITVTTRQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 95
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + AA +V + +L
Sbjct: 96 SVVVLLLFGLMLTRAPIGRSPDADSGNRWVALGVAAAAATALVWVVVDAFRTTWIDLDGP 155
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ E G L+ + P E +LL +++GAIVL +H D
Sbjct: 156 AQ--GSTEVTGAFLFRNWVLPFEALSVLLLAALVGAIVLSRKHDTDT 200
>gi|15645883|ref|NP_208061.1| NADH dehydrogenase subunit J [Helicobacter pylori 26695]
gi|2314434|gb|AAD08313.1| NADH-ubiquinone oxidoreductase, NQO10 subunit (NQO10) [Helicobacter
pylori 26695]
Length = 182
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCILSFGVALLLTLILSAPSIGENLSNQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|15806508|ref|NP_295219.1| NADH dehydrogenase I subunit J [Deinococcus radiodurans R1]
gi|6459253|gb|AAF11059.1|AE001993_9 NADH dehydrogenase I, J subunit [Deinococcus radiodurans R1]
Length = 205
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
V +N +++ L+ + AGLF + A F+A ++VY GA++V FLF+IM+L
Sbjct: 19 TVAAKNAVHAALGLVGTLICVAGLFASMNASFLAATQVIVYAGAIMVLFLFVIMLLGASQ 78
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMV-FSAEGELSRLVFKGNNVENIGKVLYT 140
+ I L S +G +G+ L T
Sbjct: 79 PITARDPLPFVGPLGAIAALLLAGGFVTLALTYQDPRPLAESVQALRGGAAGAVGETLLT 138
Query: 141 QYAYPLEISGFILLLSMIGAIVLMLR 166
++ P E +LL++++G++ L+ R
Sbjct: 139 RFLLPFEAVSILLLVAIVGSVTLVQR 164
>gi|307637940|gb|ADN80390.1| NADH-ubiquinone oxidoreductase chain J [Helicobacter pylori 908]
gi|325996544|gb|ADZ51949.1| NADH-ubiquinone oxidoreductase chain J [Helicobacter pylori 2018]
gi|325998133|gb|ADZ50341.1| NADH-ubiquinone oxidoreductase chain J [Helicobacter pylori 2017]
Length = 182
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCVLSFGVALLLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|308185017|ref|YP_003929150.1| NADH dehydrogenase subunit J [Helicobacter pylori SJM180]
gi|308060937|gb|ADO02833.1| NADH dehydrogenase subunit J [Helicobacter pylori SJM180]
Length = 182
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCILSFGVALLLTLILSAPSIGENLSNQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|298245620|ref|ZP_06969426.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Ktedonobacter
racemifer DSM 44963]
gi|297553101|gb|EFH86966.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Ktedonobacter
racemifer DSM 44963]
Length = 175
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 8/174 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +L F++ + + ++++ LVV++RN ++S +L F FV A G+++LL AEF+A++ ++
Sbjct: 1 MDFAALMFWILATILVVAALLVVSLRNIVHSAIALFFVFVMAGGIYILLNAEFIAIVQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GAV + LF +M+ I R + + I I+ +
Sbjct: 61 IYAGAVTILILFALMLTRIGGLQRTNPANRLWWIAAIISAFVGGSILYGLFNSTLAISNT 120
Query: 121 LS----RLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLR 166
+ +L NNV IG++LY+ Y P EI+ +LL++++GAIV+
Sbjct: 121 STGGGHQLPAHINNVVAIGQLLYSPTSYSYILPFEIASVVLLVAIVGAIVIGRE 174
>gi|313903489|ref|ZP_07836880.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thermaerobacter subterraneus DSM 13965]
gi|313466310|gb|EFR61833.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thermaerobacter subterraneus DSM 13965]
Length = 246
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 11/177 (6%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ F + + + ++ ++ VVT +S L FV AGLF+LL A A++ ++
Sbjct: 1 MSGTAVIFAVLAAVVLLGAWRVVTSEQIAHSALFLGLTFVGMAGLFILLKAPTFALLHVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDI----------EVAEPRKKRGFLGSFFIGILAAELIVCAS 110
VYVGA++ +F IM+ D + E R + G + + + V +
Sbjct: 61 VYVGAILTVVVFAIMLSDPEELRGAGDLALGERLRRRFLSPYYGWLPVVVAGVLVAVILA 120
Query: 111 NFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+++ IG ++T+YA P E++ LL ++IGAI L R
Sbjct: 121 GLAAAQLPRVPLGEPVA-DDLRAIGGEMFTRYAIPFEVASAALLAALIGAIGLTRRE 176
>gi|317014661|gb|ADU82097.1| NADH:ubiquinone oxidoreductase subunit J [Helicobacter pylori
Gambia94/24]
Length = 182
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCVLSFGVALLLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|217032332|ref|ZP_03437828.1| hypothetical protein HPB128_132g30 [Helicobacter pylori B128]
gi|298735707|ref|YP_003728232.1| NADH dehydrogenase I subunit J [Helicobacter pylori B8]
gi|216945998|gb|EEC24612.1| hypothetical protein HPB128_132g30 [Helicobacter pylori B128]
gi|298354896|emb|CBI65768.1| NADH dehydrogenase I chain J [Helicobacter pylori B8]
Length = 182
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCILSFGVAVLLTLILSAPSIGENLSNQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|317009953|gb|ADU80533.1| NADH dehydrogenase subunit J [Helicobacter pylori India7]
Length = 182
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L + G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCTLSFGVALLLTLILSAPSIGENLSNQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDVQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|109156519|ref|YP_654384.1| NADH dehydrogenase subunit 6 [Pavona clavus]
gi|108744138|gb|ABG02358.1| NADH dehydrogenase subunit 6 [Pavona clavus]
Length = 201
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 24/200 (12%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY +F + S +V++ NPI+S+F L+ F +A FL LG FVA++ L++YVGA+
Sbjct: 2 AFYTLAFGVVGSGIMVISALNPIHSIFWLVVVFTGSAVFFLWLGIAFVALMFLIIYVGAI 61
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS---------- 116
+ FLF+IM+L++ R + ++ I S
Sbjct: 62 AILFLFVIMLLNLTDFPPAFRLGGEADMTNYVPIGLVIGTFFFSEVASSWLIIGGPYAHR 121
Query: 117 ----------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML- 165
+ + + K N+E +G++LY Y ++ ILL++++GAIVL
Sbjct: 122 ALFGAEIRRAWDLAIPWFLMKYQNMEALGRILYIACYYLFILASLILLVALVGAIVLTQE 181
Query: 166 ---RHRRDIKRQDISKQLES 182
+KRQDI Q
Sbjct: 182 IGAEAGPMVKRQDIFFQTSR 201
>gi|109946836|ref|YP_664064.1| NADH dehydrogenase subunit J [Helicobacter acinonychis str. Sheeba]
gi|109714057|emb|CAJ99065.1| NADH dehydrogenase I chain J [Helicobacter acinonychis str. Sheeba]
Length = 182
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 91/168 (54%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVIERKQSPKILCILSFGVAVLLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + +N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NPNAIDVQISNIKAIGYVLFTDYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|15612255|ref|NP_223908.1| NADH dehydrogenase subunit J [Helicobacter pylori J99]
gi|4155780|gb|AAD06756.1| NADH oxidoreductase I [Helicobacter pylori J99]
Length = 182
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAVIV + F +M + EV E ++ L G+ ++ ++ + S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCVLSFGVALLLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|219669762|ref|YP_002460197.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfitobacterium hafniense DCB-2]
gi|219540022|gb|ACL21761.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfitobacterium hafniense DCB-2]
Length = 170
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 83/164 (50%), Gaps = 2/164 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
M ++ F++F+ +A+ S++ VVT +N ++S F L +F A L++LL AE++A + L+V
Sbjct: 3 TMATIVFFIFAIIAVASAWGVVTSKNIVHSAFFLALSFAGVAVLYVLLNAEYLAAVQLLV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+ + +F +M+ + + + L IV A + S L
Sbjct: 63 YAGAISIMVIFAVMLTLRGDVAESSPVTKKWTQGALVSALVF--IVLALVILTNSDWRIL 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ G + K+L + Y P E + ++ +++IGA+++
Sbjct: 121 AMPALAGGTTVELSKLLLSWYMVPFEAAAILITVALIGAVIIAK 164
>gi|329938294|ref|ZP_08287745.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces griseoaurantiacus
M045]
gi|329302783|gb|EGG46673.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces griseoaurantiacus
M045]
Length = 215
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 2/162 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + + ++ + VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 31 EIAFLLVGLVTLGAALVTVTTRQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 90
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + AA +V + +L
Sbjct: 91 SVVVLLLFGLMLTRAPIGRSPDTDSGNRWAALTVALAAAAALVWVVADAFRTTWVDLDGA 150
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ E G+ L+ + P E +LL +++GAIVL +
Sbjct: 151 PS--GSTEVTGQALFQNWVLPFEALSVLLLAALVGAIVLSRK 190
>gi|261839987|gb|ACX99752.1| NADH dehydrogenase subunit J [Helicobacter pylori 52]
gi|317013057|gb|ADU83665.1| NADH dehydrogenase subunit J [Helicobacter pylori Lithuania75]
Length = 182
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 90/168 (53%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY F+ + + + +V+T N +Y++ +L + V + F LL AEF+ ++ + V
Sbjct: 1 MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV 60
Query: 62 YVGAVIVFFLFIIMMLDI--DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
YVGAVIV + F +M + ++ + K + SF + IL ++ S S +
Sbjct: 61 YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCVLSFGVAILLTLILSAPSIGENLSKQV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N++ IG VL+T Y P E + +LL++M+G I ++
Sbjct: 121 NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQK 168
>gi|48474399|sp|Q85CT7|NU6C_ANTFO RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|27807929|dbj|BAC55404.1| NADH dehydrogenase ND6 subunit [Anthoceros formosae]
gi|27808102|dbj|BAC55504.1| NADH dehydrogenase ND6 subunit [Anthoceros formosae]
Length = 200
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 6/185 (3%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+FF I S VV + N +YS F L FV + L+LLL A+FVA +++YVG
Sbjct: 12 EVFFVFIELGLIFGSLGVVFLTNIVYSAFLLGLVFVCISFLYLLLDADFVATAQILIYVG 71
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV + +F +M+++ + I + ++ + + +
Sbjct: 72 AVNILIVFAVMLINKPQSLQFLPSWTVGDTITLILCTSLFFLLISMILSISWSNIFSIAQ 131
Query: 125 VFKGNN------VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
K V+ IG L + P E+ +LL+++IGAI + R ++ +++ +
Sbjct: 132 SNKIGEQVLKSSVQGIGSSLLIDFLLPFELLSIVLLVALIGAITIARREKKVKLQKNRTL 191
Query: 179 QLESN 183
Q+ +
Sbjct: 192 QVTKD 196
>gi|332830197|gb|EGK02825.1| hypothetical protein HMPREF9455_01075 [Dysgonomonas gadei ATCC
BAA-286]
Length = 167
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 90/167 (53%), Gaps = 1/167 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M S+ FY+ + + I + L V +NPI+S +I F + +G FLLL A F+A++ +VVY
Sbjct: 1 MISVIFYILAAITIGTGILTVISKNPIHSAVYMIICFFSISGHFLLLNALFLAVVNIVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V LF +M++++ + EP+KK + + +++ A+
Sbjct: 61 AGAIMVLLLFTLMLMNLSEQH-EPKKKVISRVAATVSSCLMGIVLLAALIKSAPVVETYK 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+V IG+VL +Y P E + +L+ +MIGA+++ + ++
Sbjct: 120 AEGLDYQSVNIIGQVLLDEYLVPFEFASILLITAMIGAVLISKKEKK 166
>gi|152993798|ref|YP_001359519.1| NADH dehydrogenase subunit J [Sulfurovum sp. NBC37-1]
gi|151425659|dbj|BAF73162.1| NADH-quinone oxidoreductase, chain J [Sulfurovum sp. NBC37-1]
Length = 187
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FYLFS + I + V +N +Y++ SL V +G F +LGA+F+ ++ L+V
Sbjct: 1 MYETIAFYLFSALTIGLFLITVMSKNVLYAMTSLAAGMVLISGFFFILGADFLGVVQLIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA++ + F +M D ++ E + G+ A L++ + + + L
Sbjct: 61 YVGAIMALYSFAMMFFDATKDIKEKNTNPALIFVL-GGLSALALVLMFAAPIYNESIQAL 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDIS 177
+ N +++G VL+T+Y P E++ +LL++MI I+L + +D S
Sbjct: 120 YPMHEGVGNAQDVGIVLFTKYLVPFEVAAVMLLVAMIAGIILAGKKMDQSLTKDTS 175
>gi|227535962|ref|ZP_03966011.1| possible NADH dehydrogenase (quinone) [Sphingobacterium
spiritivorum ATCC 33300]
gi|300771668|ref|ZP_07081543.1| NADH-quinone oxidoreductase subunit J [Sphingobacterium
spiritivorum ATCC 33861]
gi|227244205|gb|EEI94220.1| possible NADH dehydrogenase (quinone) [Sphingobacterium
spiritivorum ATCC 33300]
gi|300761657|gb|EFK58478.1| NADH-quinone oxidoreductase subunit J [Sphingobacterium
spiritivorum ATCC 33861]
Length = 167
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 90/165 (54%), Gaps = 2/165 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY +F++I + + + +NP++SV L+ F ++LL A+F+A++ +VY+GA+
Sbjct: 3 IFYFVAFLSIFFALMTIFTKNPVHSVLYLVITFFTFTVHYILLNAQFLAVVNFIVYMGAI 62
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V FLF++M+L+++ E R + G+ L+V + + +
Sbjct: 63 MVLFLFVLMLLNLNKESEPMRSGVVKVMGAVAGMC--LLVVVLGSLRIIEIDNGDVVAQP 120
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
V+ +G+VL+ ++ P EIS +LL +M+GA++L + + +
Sbjct: 121 SIGLVKQLGEVLFDKFLLPFEISSILLLTAMVGAVLLAKKDTKKV 165
>gi|86158999|ref|YP_465784.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85775510|gb|ABC82347.1| NADH dehydrogenase subunit J [Anaeromyxobacter dehalogenans 2CP-C]
Length = 211
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + FY + + + + V RN +YS F L+ A + A L++LL A+FVA+ L++Y
Sbjct: 47 LPDVLFYALAVLTVAGAAGVALSRNILYSTFGLLVALLGAGSLYVLLSADFVAVTQLLIY 106
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+G V+V LF +M+ + ++ G G F + + A +++ + +
Sbjct: 107 IGGVLVLILFAVMLTNRITDINVSNTSFGLFGGFLLFVAGAPVLLAVALLT----PWQAG 162
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ IG +++ P E++ +LL +++GAIV+ +
Sbjct: 163 AAAPLAPTTQAIGDAFLSRWLLPFEVASLVLLSTLVGAIVIARKE 207
>gi|255535804|ref|YP_003096175.1| NADH-ubiquinone oxidoreductase chain J [Flavobacteriaceae bacterium
3519-10]
gi|255342000|gb|ACU08113.1| NADH-ubiquinone oxidoreductase chain J [Flavobacteriaceae bacterium
3519-10]
Length = 164
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + F+ + +A+ S+ V RNP+Y++ +LI F + A +++LL A+F+ ++ ++VY
Sbjct: 1 MEQVIFFSVAAIALASAVYFVIARNPLYAILALIVTFFSIAAMYILLNAQFLGIVQIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FL+I+MML+++ A+ KK+ + I + +
Sbjct: 61 AGAIMVLFLYILMMLNLN--RADESKKQNLTKFIGVFAACILFIGLLGAYKGLGTGTYGT 118
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +N+G++L+ +Y P E++ ++L ++GA+++ +
Sbjct: 119 GVDSSIGLTKNLGRLLFNEYVLPFELASILILAGIVGAVLIGKK 162
>gi|124112063|ref|YP_001019164.1| subunit 6 of NADH-plastoquinone oxidoreductase [Chlorokybus
atmophyticus]
gi|221272346|sp|Q19V56|NU6C_CHLAT RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|124012179|gb|ABD62195.2| subunit 6 of NADH-plastoquinone oxidoreductase [Chlorokybus
atmophyticus]
Length = 214
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/182 (23%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q + ++ + VV + N +YS F L ++ AG++LLL A+FVA +++Y
Sbjct: 7 VQKFSLFFLEGAVLVGALGVVLLPNILYSAFLLGGVLMSIAGIYLLLNADFVAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDI------EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS 116
VGA+ V LF IM+++ + +G IG+ + + + +
Sbjct: 67 VGAINVLILFAIMLVNKNDGRVAAGTSNSSGVTNNIIGLTCIGLAGFLIDMIVTTPWLPK 126
Query: 117 AEGELSRLVFKGNNVEN----------IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ L K ++ IG +++ + P E+ +LL++++GAIV+ R
Sbjct: 127 GVAVATSLSAKADSTAAQTQLKGSISIIGLHIFSDFLLPFEVISLLLLVTLVGAIVIARR 186
Query: 167 HR 168
R
Sbjct: 187 ER 188
>gi|156742069|ref|YP_001432198.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Roseiflexus
castenholzii DSM 13941]
gi|156233397|gb|ABU58180.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Roseiflexus
castenholzii DSM 13941]
Length = 217
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ ++ F +F+ + + S+ L VTV+N +++ LI +F L+LL+ AEF+ + +++
Sbjct: 3 TLITVLFLIFAALILASAILTVTVKNIVHAALWLISSFFGVGALYLLMEAEFLGVAQVLI 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA--EG 119
YVGA+ + LF IM+ + + + + L++ +
Sbjct: 63 YVGALSILILFAIMLTRDLEGSQNRQLTPRWWIALIVPAALFGLLIVPTVMTHAWQLPPP 122
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + IG +Y E++ +L ++MIGAIV+
Sbjct: 123 PPTGQPPAISGAQQIGTAFMREYLLSFEVAAILLTVAMIGAIVIAF 168
>gi|50346838|ref|YP_053209.1| NADH dehydrogenase subunit 6 [Nymphaea alba]
gi|75275853|sp|Q6EVZ7|NU6C_NYMAL RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|50250383|emb|CAF28649.1| NADH dehydrogenase ND6 subunit [Nymphaea alba]
Length = 177
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 6/171 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV + NPIYS FSL V + ++ + FVA L++Y
Sbjct: 7 IHDILLVSLGSGLIVGGLGVVLLTNPIYSAFSLGLVLVCISLFYIPSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V LF +M ++ GF I + + +
Sbjct: 67 VGAINVLILFAVMFMNGSEYYNYFHFWTVGDGFTSLVCTSIFFSLIATIPNTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S + + +NV+ IG L T + P E+ ILL+S++GAI + R
Sbjct: 127 TRSNQIIEQDLTSNVQQIGIHLSTDFYLPFELISIILLVSLVGAIAMARRE 177
>gi|257852680|gb|ACV71352.1| NADH dehydrogenase subunit 6 [Rafflesia tuan-mudae]
Length = 180
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F +GL LLLG + AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFPILVFRETSGLLLLLGLDLSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-----------AEGELSRLVFK 127
I I R S IG++ + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLILWWEMFFILYKETLPLLPTQRKTTSLRYTVYAEKVRS 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD--IKRQDISKQLESNP 184
++E +G +LYT Y + +LL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTHLETLGNLLYTYYFVWFLVPSILLLVAMIGAIVLTMHRTTHSAVKRQDLFRRNAIDF 179
>gi|300114501|ref|YP_003761076.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Nitrosococcus watsonii C-113]
gi|299540438|gb|ADJ28755.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosococcus
watsonii C-113]
Length = 167
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FY+ + +A++S+ +V+T N ++++ LI + + A +F LLGA F A + +++Y G
Sbjct: 2 EITFYIAAIIAVVSTIMVITRLNAVHALLYLIVSLLAVALIFFLLGAPFAAALEVIIYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F+IMML++ E + + + + +++ +++ + LS
Sbjct: 62 AIMVLFVFVIMMLNLGKESVAQENRWFTPYLWLGPGILSFVLLIELVYLLATDSSALSSA 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++GA L +
Sbjct: 122 --EMITPQQVGVALFGPYLLAVELAAMLLLTGLVGAYHLGREEPEE 165
>gi|258593442|emb|CBE69781.1| NAD(P)H-quinone oxidoreductase chain 6 (NAD(P)H dehydrogenase I,
chain 6) (NDH-1, chain 6) [NC10 bacterium 'Dutch
sediment']
Length = 170
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F+L + + +S LVV +N ++ +L+FAF A LF+LL AEF+A +++
Sbjct: 5 TVTHVVFFLMAAFTVGASLLVVLAKNIVHCAIALVFAFFGVAALFVLLDAEFLAAAQVLL 64
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVG + + LF IM+ I + IV + +
Sbjct: 65 YVGGITILLLFAIMLTSRISAGGVKIMNE----QVGISAVVVLAIVGLLAYANLKGFPAM 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ +N +IGK+L T Y P E+ +LL +M+GAI+L R R
Sbjct: 121 VPPLTMADNTASIGKLLLTTYVLPFEVVSLLLLAAMVGAIILARRER 167
>gi|255691143|ref|ZP_05414818.1| NADH dehydrogenase I, subunit 6 [Bacteroides finegoldii DSM 17565]
gi|260623236|gb|EEX46107.1| NADH dehydrogenase I, subunit 6 [Bacteroides finegoldii DSM 17565]
Length = 170
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + I S + VT + + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAAFIIAMSIMTVTTQRIVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + AE K+ FL F I +I+ + + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRAERLKRSRFLAGLFTMIAGLAIILFIT---LKHNFMQT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
+ L + N+ IG L + Y P E +LL +IG I++ +
Sbjct: 121 ANLAPQEINIHTIGHALLSSDKYGYVLPFEAVSILLLACIIGGIMIARKR 170
>gi|29831429|ref|NP_826063.1| NADH dehydrogenase I chain J [Streptomyces avermitilis MA-4680]
gi|29608544|dbj|BAC72598.1| putative NADH dehydrogenase I chain J (complex I) [Streptomyces
avermitilis MA-4680]
Length = 207
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 75/166 (45%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ + VT + +++ L+ A +LLL AEF+A + +++YVG
Sbjct: 26 EIAFLLVGLVTFGAAIVTVTTKQLVHAALWLVATLGGLAVEYLLLTAEFIAWVQVLIYVG 85
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + +A +V + +L+
Sbjct: 86 SVVVLLLFGLMLTKAPIGRSPDADSGNRWAALTVAVASAATLVWVVVDAFRTTWLDLNGA 145
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
V G L+ + P E +LL +++GAIVL + + D
Sbjct: 146 AAGSTAVT--GASLFQNWVLPFEALSVLLLAALVGAIVLSRKAKAD 189
>gi|238920559|ref|YP_002934074.1| NADH-quinone oxidoreductase subunit j [Edwardsiella ictaluri
93-146]
gi|238870128|gb|ACR69839.1| NADH-quinone oxidoreductase subunit j [Edwardsiella ictaluri
93-146]
Length = 190
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + +A++++ V+T NP++++ LI + + A +F LGA F + ++VY G
Sbjct: 2 EFAFYAAALVAVLATIRVITHTNPVHALLYLIVSLLAVAAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + G + L + +++ + + + +G +
Sbjct: 62 AIMVLFVFVVMMLNLGHSVVEQERAWLRPGVWIGPALLSLILLAVVLYAISTLQGGFT-- 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E+ +LL ++ A + H
Sbjct: 120 DGRAVDAKAVGIALFGPYVLAVELVSMLLLAGLVVAFHIGREHHPG 165
>gi|289548977|ref|YP_003473965.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermocrinis
albus DSM 14484]
gi|289182594|gb|ADC89838.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermocrinis
albus DSM 14484]
Length = 163
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 95/165 (57%), Gaps = 3/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + F + S I+S V+ ++NP++ V S + + AG+FL LGAE +A + L++Y
Sbjct: 1 MEWVIFGILSLWLILSVLGVLFLKNPVHVVLSFLSVVLATAGIFLHLGAELLAGLQLIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
A++VF++ ++ + + R + +L F + + L+V A +++ +S
Sbjct: 61 AVAIVVFYVLVVTTIPWEKV---KRFEGIYLREFLLAVPFFLLLVVALSYLAWSGSFATK 117
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
G+NV ++GKVL+T Y +P E++ ILL++M+GAI+L +
Sbjct: 118 GFPLSGDNVRDVGKVLFTSYLFPFELASVILLIAMVGAILLGRKE 162
>gi|257852720|gb|ACV71372.1| NADH dehydrogenase subunit 6 [Lepidobotrys staudtii]
Length = 169
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 11/168 (6%)
Query: 28 PIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPR 87
P++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM I I
Sbjct: 1 PVHSVLFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFHIQIAEIHEE 60
Query: 88 KKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFKGNNVENIGK 136
R S IG++ + + V N+E +G
Sbjct: 61 VLRYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRSWTNLETLGN 120
Query: 137 VLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
+LYT Y+ + ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 LLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDF 168
>gi|15606571|ref|NP_213951.1| NADH dehydrogenase I chain J [Aquifex aeolicus VF5]
gi|2983792|gb|AAC07350.1| NADH dehydrogenase I chain J [Aquifex aeolicus VF5]
Length = 178
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/169 (29%), Positives = 93/169 (55%), Gaps = 2/169 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ + L F FS +AI+S ++T+RNP+Y V +L+ + + AG+F GAE V + L+
Sbjct: 1 MMGRLLIFGFFSILAILSGIGIITLRNPVYVVVALLSSLIAVAGIFFTAGAELVGALQLL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPR--KKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
+Y A+ VF++ +I + + + G + + L E+IV + S E
Sbjct: 61 IYAVAIAVFYIIVISAVPWEKAKKSESHYRFEGLISLPVVLFLYIEMIVVFLLGVKASPE 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
G++++ + K N E IG +L+++Y E+ +LL+ MIGA+++ +
Sbjct: 121 GKIAKFIEKFGNTEVIGAILFSKYFLAFEVVSIVLLMGMIGAVLIGRKE 169
>gi|229164239|ref|ZP_04292173.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
R309803]
gi|228619261|gb|EEK76153.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
R309803]
Length = 163
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 82/156 (52%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R ++ F + A + ++ + L NN I
Sbjct: 63 MLTKHNAENESRLTLRKWIIFFAVVAFGAVMYFAVNSIDFSTQSTTQGSLPLHENNTLQI 122
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 123 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 158
>gi|220904924|ref|YP_002480236.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219869223|gb|ACL49558.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 214
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +FF + + ++ L + +RNP++ V ++ FV+ A ++L L AEF+A + +VV
Sbjct: 1 MFGEIFFLYCAVVIVVCGILSIRLRNPVHCVLLVLLLFVHMAAVYLTLQAEFLAAVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+V +LF++ ++++ E+ P + IGI ++ F + +
Sbjct: 61 YAGAVLVMYLFVVFLVNLKREMRMPALVPHPWVGYAIGIALCGTLLWGLRFFMAGGKDVW 120
Query: 122 SRLVF-KGNNVENIGKVLYTQYAYPLE 147
+ + + + L+T LE
Sbjct: 121 PYEALREATHTRALSRELFTHNFLALE 147
>gi|224437350|ref|ZP_03658322.1| NADH dehydrogenase subunit J [Helicobacter cinaedi CCUG 18818]
gi|313143813|ref|ZP_07806006.1| NADH dehydrogenase subunit J [Helicobacter cinaedi CCUG 18818]
gi|313128844|gb|EFR46461.1| NADH dehydrogenase subunit J [Helicobacter cinaedi CCUG 18818]
Length = 173
Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/173 (30%), Positives = 92/173 (53%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +S+ FYLFS + I+S +VV+ IY++ +L + +G+F LGAEF+ + +VV
Sbjct: 1 MFESISFYLFSTLCIVSFLIVVSSSRIIYAMTALAGGMIFISGIFFTLGAEFIGAVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G+VI + F +M D +V E RK + +GI +I+ + E
Sbjct: 61 YGGSVIALYAFAMMFFDTSKDVIESRKNEWVVSVLCVGICVVLVIMFGLPLLGNQLETIA 120
Query: 122 SRLV----FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +N++ IG VL+TQY P E++ +LL++M+ IVL ++ +
Sbjct: 121 DSANLLDFAEMSNIQKIGYVLFTQYLIPFELAALMLLVAMVAGIVLSVKKEQK 173
>gi|157325586|ref|YP_001468364.1| NADH dehydrogenase subunit 6 [Ipomoea purpurea]
gi|221272327|sp|A7Y3L7|NU6C_IPOPU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|157056814|gb|ABV02404.1| NADH-plastoquinone oxidoreductase subunit 6 [Ipomoea purpurea]
Length = 176
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ S VV NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGSIGVVLFPNPIYSAFSLGLVLVCISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAE---PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V LF +M L+ + G I + + +
Sbjct: 67 VGAINVLILFAVMFLNGSEYSNDFPLWTLGDGITSQVCISLFISLISTILDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAIV+
Sbjct: 127 TRSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIVIAR 175
>gi|253729607|ref|YP_003029792.1| NdhG [Bambusa oldhamii]
gi|255961434|ref|YP_003097629.1| NADH-plastoquinone oxidoreductase subunit 6 [Dendrocalamus
latiflorus]
gi|246367117|gb|ACS94728.1| NdhG [Bambusa oldhamii]
gi|255040311|gb|ACT99971.1| NADH-plastoquinone oxidoreductase subunit 6 [Dendrocalamus
latiflorus]
Length = 176
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + F ++ VV + NPIYS FSL + + ++LL + FVA+ L++Y
Sbjct: 7 IHEILVLFGEFFLLLGGIGVVLLTNPIYSAFSLGLVLICISLFYILLNSYFVAVAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M +D GF I IL + +
Sbjct: 67 VGAINVLIIFAVMFIDGSEWSKNKNYWTIGDGFTSLVCITILFSLMTTIPDTSWYGILWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + NNV+ IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TRSNQIVEQGLINNVQQIGIHLATDFYLPFELISIILLVSLIGAITMAR 175
>gi|8954362|ref|NP_059351.1| NADH dehydrogenase subunit 6 [Cyanidioschyzon merolae]
gi|3927866|dbj|BAA34654.1| NADH-ubiquinone oxidoreductase chain 6 [Cyanidioschyzon merolae
strain 10D]
Length = 204
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 60/200 (30%), Positives = 112/200 (56%), Gaps = 8/200 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY + + I+SS++V++++N ++S+ L+ F+NAA L ++L EF+A++ L+
Sbjct: 1 MSSELVLFYCLASIIIVSSYIVISLKNSVFSILFLVLIFLNAAALIMMLETEFLAILFLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE-- 118
VYVGA+ V FLF+I++L++ + + L +GI+ + +
Sbjct: 61 VYVGAIAVLFLFVIIILNVKLSEFYYSIGQYILIGSILGIIFLVQTFLILDTNIEFHFLD 120
Query: 119 ------GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
E + V+ +N+E +G LYT Y Y ++ ILL+++IGAIVL + R +K
Sbjct: 121 NIHNLYPEWNFEVYSQSNIEALGSNLYTNYMYVFILAAIILLIAIIGAIVLTIHQRGYVK 180
Query: 173 RQDISKQLESNPDNSIVMVK 192
RQ+I Q+ + +S+ +
Sbjct: 181 RQNILNQVSRDFKDSVYYIN 200
>gi|291010624|ref|YP_003495129.1| NADH dehydrogenase subunit 6 [Pycnococcus provasolii]
gi|258406747|gb|ACV72093.1| NADH dehydrogenase subunit 6 [Pycnococcus provasolii]
Length = 199
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 7/199 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ Q + +A + FLV++ ++P++SV SLIF+FV + + L L + +A+I L+
Sbjct: 1 MLFQQSILCFIAGLACGAGFLVISSKSPVHSVLSLIFSFVLCSFVLLTLEIDILALIFLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI-------VCASNFM 113
VYVGA+ + FLF++M+L++ + A + F FF+ L +
Sbjct: 61 VYVGAIAILFLFVVMILNVKVAEARANLFQYFPLGFFLLSLLYFDLGLLMPASFSVDVAH 120
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
E + V +E+IG +LYT + + L +G +LLL+++GAI+L L + R
Sbjct: 121 FIPFYLEWPKAVLSFGCLESIGFLLYTYFPFYLIGAGLLLLLAIVGAILLTLHRGVGVHR 180
Query: 174 QDISKQLESNPDNSIVMVK 192
Q++S Q + + MV+
Sbjct: 181 QEVSFQNRRDWVEVLHMVQ 199
>gi|323168551|gb|EFZ54231.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Shigella sonnei 53G]
gi|332766099|gb|EGJ96309.1| NADH:ubiquinone oxidoreductase, membrane subunit J [Shigella
flexneri 2930-71]
Length = 166
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
++T NP++++ LI + + +G+F LGA F + ++VY GA++V F+F++MML++
Sbjct: 1 MITHTNPVHALLYLIISLLAISGVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGG 60
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ 141
E ++ + + + +++ + + + + + + +G L+
Sbjct: 61 SEIEQERQWLKPQVWIGPAILSAIMLVVIVYAILGVNDQ--GIDGTPISAKAVGITLFGP 118
Query: 142 YAYPLEISGFILLLSMIGAIVLMLRHRRD 170
Y +E++ +LL ++ A + R
Sbjct: 119 YVLAVELASMLLLAGLVVAFHVGREERAG 147
>gi|309322498|ref|YP_003934011.1| NADH-plastoquinone oxidoreductase subunit 6 [Eucalyptus grandis]
gi|308223332|gb|ADO23640.1| NADH-plastoquinone oxidoreductase subunit 6 [Eucalyptus grandis]
Length = 176
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ S VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGSLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V LF +M ++ + G IL + +
Sbjct: 67 VGAINVLILFAVMFMNGSEYYKDLNLWTVGDGITSLVCTSILVSLMTTILDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQIIEQDLIGNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|27262370|gb|AAN87466.1| NADH-quinone oxidoreductase chain J [Heliobacillus mobilis]
gi|111074964|gb|ABH04826.1| NAD(P)H-quinone oxidoreductase subunit 6 [Heliobacillus mobilis]
Length = 169
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FY + M I+S+ VV +++ ++S L +F+ AGL++LL A+F+A + ++VY G
Sbjct: 7 AAAFYGLAGMTILSAAGVVFLKDIVHSALMLALSFIGVAGLYVLLNADFLAAVQILVYGG 66
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV + F +M+ R + ++A ++ + + +
Sbjct: 67 AVAILIAFGVMLTRRRNMKESNPNNRW---VIYASFVSAAFFAICGWALIGTDFKPVGQQ 123
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
V VE + +L Y E + +LL++++GAI+L +
Sbjct: 124 VNPEAAVEGLASLLLGDYVVAFESAAVLLLVALVGAIILAKGAKE 168
>gi|148653488|ref|YP_001280581.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Psychrobacter sp. PRwf-1]
gi|148572572|gb|ABQ94631.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Psychrobacter sp. PRwf-1]
Length = 234
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY +AII+S V+ + NP++++ S+I + + AG+F ++GA F + ++VY GA++
Sbjct: 15 FYALGLVAIIASLRVIMLANPVHAILSMIVSLLALAGIFFIIGAPFAGALQVIVYAGAIL 74
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR---- 123
V F+F+IMML++ ++ + + + +I +++ G +
Sbjct: 75 VLFVFVIMMLNLGVKNDARESLWLSSDVWAVPAALSFVIAVVLGYILSLGNGVHNADGTV 134
Query: 124 ----LVFKGNNVENIGKVLYTQYAYPLE 147
+ + + + +G L+T+Y +E
Sbjct: 135 AQAMIGAQTISAKQVGIALFTEYLLLVE 162
>gi|313896077|ref|ZP_07829631.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Selenomonas
sp. oral taxon 137 str. F0430]
gi|320529343|ref|ZP_08030431.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Selenomonas
artemidis F0399]
gi|312975502|gb|EFR40963.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Selenomonas
sp. oral taxon 137 str. F0430]
gi|320138309|gb|EFW30203.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Selenomonas
artemidis F0399]
Length = 164
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 3/161 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S FY+ + + +I + VV N ++S L+ +F+ A ++ +GAEF+ + L+VY G
Sbjct: 2 SFIFYVLAAITVIGALGVVLSPNVVHSALFLVVSFIGVASMYFYIGAEFLGAVQLMVYSG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV V + IM+ D ++ F + + ++ +
Sbjct: 62 AVAVLIVMAIMLTRRDSMAHSNPSQKLFRRVVTGLLAGGFFFLMGLGIVLAPMPDGM--- 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ I ++ Y P EI +LL +MIGA++L
Sbjct: 119 LGAPTGAHEIAALMLGAYVLPFEIGAVLLLAAMIGALLLAR 159
>gi|20065788|ref|NP_612820.1|ND6_16049 NADH dehydrogenase subunit 6 [Acropora tenuis]
gi|5817779|gb|AAD52916.1|AF152244_3 NADH dehydrogenase subunit 6 [Acropora tenuis]
gi|19908468|gb|AAM02911.1|AF338425_5 NADH dehydrogenase subunit 6 [Acropora tenuis]
Length = 197
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F + S +V++ NPI+S+F LI F+ +A FL LG FVA++ L++YVGA+ +
Sbjct: 1 MLAFGVVGSGIMVISALNPIHSIFWLIVVFIGSAVFFLWLGISFVALMFLIIYVGAIAIL 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------------- 116
FLF+IM+L++ R + +I I S
Sbjct: 61 FLFVIMLLNLTDFPPAFRLGGEADMTNYIPIGLVIGTFFFSEVASSWLIIGGPYTPQGFL 120
Query: 117 -------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + + K N+E +G++LY Y ++ FILL++M+GAIVL
Sbjct: 121 GAEIGGAWDLAIPWFLMKYQNMEALGRILYIACYYLFILASFILLVAMVGAIVLTQEIGS 180
Query: 170 D----IKRQDISKQLES 182
+ +KRQDI Q
Sbjct: 181 EVGPVVKRQDIFFQTSR 197
>gi|229072761|ref|ZP_04205961.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus F65185]
gi|229193545|ref|ZP_04320490.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus ATCC
10876]
gi|228589934|gb|EEK47808.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus ATCC
10876]
gi|228710387|gb|EEL62361.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus F65185]
Length = 162
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L NN I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNVDFANESTQGSLPLHENNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAIVL + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIVLAKKDEKE 157
>gi|78186624|ref|YP_374667.1| NADH dehydrogenase I subunit 6 [Chlorobium luteolum DSM 273]
gi|78166526|gb|ABB23624.1| NADH dehydrogenase subunit J [Chlorobium luteolum DSM 273]
Length = 177
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FYLF+ + ++S+ VV RN IYS FSL+F F A L++ L A+F+A+ +VVYVG
Sbjct: 7 TAIFYLFAAITVLSAAFVVFSRNIIYSAFSLLFTFFGVAALYVFLSADFIAVTQVVVYVG 66
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V LF +M + V K L +L + + S
Sbjct: 67 GILVLLLFGVMFTNK---VMTTDLKADVLNVVPGALLFLGTLAGLLYTFYTTNGWMPSET 123
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGF 151
+ +G+ VE IG +++ P E++
Sbjct: 124 MLEGSVVERIGFETMSRFVLPFEMASI 150
>gi|229082509|ref|ZP_04214972.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock4-2]
gi|228700941|gb|EEL53464.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock4-2]
Length = 162
Score = 85.1 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L NN I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANESTQGSLPLHENNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAIVL + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIVLAKKDEKE 157
>gi|92115239|ref|YP_575167.1| NADH dehydrogenase (quinone) [Chromohalobacter salexigens DSM 3043]
gi|91798329|gb|ABE60468.1| NADH dehydrogenase subunit J [Chromohalobacter salexigens DSM 3043]
Length = 203
Score = 85.1 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FYL + +A++++ V+T +P++++ LI + + A +F LGA F + ++VY G
Sbjct: 2 EIAFYLSAVVAVLATLGVITGTHPVHALLYLIVSLIAVALVFFALGAPFAGALEVIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ A+ + ++G ++ R+
Sbjct: 62 AIMVLFVFVVMMLNLGESTAQQE-RAWLRPRTWLGPAVLSSVLLLVLLTSLIGADVGGRI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLE 147
+ +G +L+ Y +E
Sbjct: 121 HGDTLTAKAVGTLLFGPYLVVVE 143
>gi|328884360|emb|CCA57599.1| NADH-ubiquinone oxidoreductase chain J [Streptomyces venezuelae
ATCC 10712]
Length = 182
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + + ++ + VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 17 EIAFLLVGLVTLGAALVTVTTRQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 76
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + R + + + AA +V + +L
Sbjct: 77 SVVVLLLFGLMLTKAPIGRSPDADSRNKPVAVAVALAAAAALVWVVVDAFRTTWIDLDGA 136
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
V V G++L+ + P E +LL +++GAIVL + +
Sbjct: 137 VQGSTKVS--GEILFRHWVLPFEALSVLLLAALVGAIVLSRKKKEG 180
>gi|237714288|ref|ZP_04544769.1| NADH dehydrogenase subunit I [Bacteroides sp. D1]
gi|237719848|ref|ZP_04550329.1| NADH dehydrogenase I [Bacteroides sp. 2_2_4]
gi|262408335|ref|ZP_06084882.1| NADH dehydrogenase subunit I [Bacteroides sp. 2_1_22]
gi|293373610|ref|ZP_06619958.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
ovatus SD CMC 3f]
gi|294646449|ref|ZP_06724090.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
ovatus SD CC 2a]
gi|294809421|ref|ZP_06768126.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
xylanisolvens SD CC 1b]
gi|298480347|ref|ZP_06998545.1| NADH dehydrogenase I, subunit 6 [Bacteroides sp. D22]
gi|229445780|gb|EEO51571.1| NADH dehydrogenase subunit I [Bacteroides sp. D1]
gi|229451117|gb|EEO56908.1| NADH dehydrogenase I [Bacteroides sp. 2_2_4]
gi|262353887|gb|EEZ02980.1| NADH dehydrogenase subunit I [Bacteroides sp. 2_1_22]
gi|292631435|gb|EFF50065.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
ovatus SD CMC 3f]
gi|292638220|gb|EFF56597.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
ovatus SD CC 2a]
gi|294443357|gb|EFG12119.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
xylanisolvens SD CC 1b]
gi|295086640|emb|CBK68163.1| NADH dehydrogenase subunit J [Bacteroides xylanisolvens XB1A]
gi|298273628|gb|EFI15191.1| NADH dehydrogenase I, subunit 6 [Bacteroides sp. D22]
Length = 170
Score = 84.7 bits (208), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + I S + VT + + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAAFIIAMSIMTVTTQRIVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + AE K+ L F I +I+ + + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRAEKAKRSKVLAGLFTMIAGLAIILFIT---LKHDFMQT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
+ L + ++ IG L + Y P E +LL +IG I++ +
Sbjct: 121 ANLAPQEISIHAIGNALLSSDKYGYVLPFEAVSILLLACIIGGIMIARKR 170
>gi|53804531|ref|YP_113812.1| NADH dehydrogenase I, J subunit [Methylococcus capsulatus str.
Bath]
gi|53758292|gb|AAU92583.1| NADH dehydrogenase I, J subunit [Methylococcus capsulatus str.
Bath]
Length = 164
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 86/163 (52%), Gaps = 3/163 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + FYL + +A+ ++F+VV N ++++ LI + + + +F LLGA F A++ +++Y
Sbjct: 1 MELILFYLSALVAVAATFMVVIQCNTVHALLYLIVSLLASGFIFYLLGAFFAAVLEVIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA+IV F+F++MML++ + E ++ G + ++ F++ + +
Sbjct: 61 AGAIIVLFVFVVMMLNLGSKTIEQERQWLCPGIWHGPAALCAILFAELLFILMRSGTHEA 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +G L+ Y +E + +LL ++GA L
Sbjct: 121 GRIVDS---KALGIALFGPYLLAVETASMLLLAGLVGAYHLGR 160
>gi|229087782|ref|ZP_04219904.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock3-44]
gi|228695541|gb|EEL48404.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock3-44]
Length = 164
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 1/159 (0%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
S AII L++ + ++ + +L+F F++ AGL+ LL AEFV + +++Y GA+ + +
Sbjct: 2 SLTAIIGGILMLNLTKVMHMMLALVFTFLSIAGLYFLLSAEFVGVAQILIYSGAITIIMI 61
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
F IM+ D +E L F + ++ A N + F+ + L N
Sbjct: 62 FGIMLTKHDA-ESESSFSFRKLLIFLAVVAFGGVMYFAVNNIDFTNQNVQGSLPLHEQNT 120
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
IG +LY++Y P E++ ILL++++GAIVL + +
Sbjct: 121 LQIGTLLYSKYVIPFELTSVILLVALVGAIVLAKKDEEE 159
>gi|115391956|ref|YP_778544.1| NADH dehydrogenase subunit 6 [Jasminum nudiflorum]
gi|122164926|sp|Q06R77|NU6C_JASNU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|110456277|gb|ABG74682.1| NADH degydrogenase subunit 6 [Jasminum nudiflorum]
Length = 176
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ S VV + NPIYS FSL + ++LL + FVA L++Y
Sbjct: 7 IHDFLLVFLELGLILGSLGVVFLPNPIYSAFSLGLVLFCISLFYILLNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + + + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFYLWTVGDGVTSMVCTSLFISLITTIPDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQIIEKDLISNSQQIGIHLVTDFFLPFELISIILLVALIGAIAIAR 175
>gi|306841951|ref|ZP_07474629.1| NADH dehydrogenase subunit J [Brucella sp. BO2]
gi|306287984|gb|EFM59392.1| NADH dehydrogenase subunit J [Brucella sp. BO2]
Length = 129
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG----NN 130
MMLD+D + + +G++ ++ +F+ + L N
Sbjct: 1 MMLDVDFAELKRGALQYAPVGALVGLILLGELIFVFASRMFAPKLGQGALPIPDVATRTN 60
Query: 131 VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVM 190
+G +LYT Y + +++G +LL++MIGAIVL +RH+ ++KRQ I Q+ P+ +I +
Sbjct: 61 TAALGDILYTHYVFYFQVAGLVLLVAMIGAIVLTMRHKPNVKRQSIPAQVARTPETAIEI 120
Query: 191 VKVKSGKGI 199
KV++GKGI
Sbjct: 121 RKVETGKGI 129
>gi|108802695|ref|YP_636352.1| NADH dehydrogenase subunit 6 [Eucalyptus globulus subsp. globulus]
gi|122219159|sp|Q49KU5|NU6C_EUCGG RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|60460861|gb|AAX21081.1| NADH-plastoquinone oxidoreductase subunit 6 [Eucalyptus globulus
subsp. globulus]
Length = 176
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ S VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGSLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ + LF +M ++ + G IL + +
Sbjct: 67 VGAINILILFAVMFMNGSEYYKDLNLWTVGDGITSLVCTSILVSLMTTILDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQIIEQDLIGNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|228911134|ref|ZP_04074940.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
IBL 200]
gi|228848497|gb|EEM93345.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
IBL 200]
Length = 162
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L NN I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNVDFANESTQGSLPLHENNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAIVL + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIVLAKKDEKE 157
>gi|315453244|ref|YP_004073514.1| NADH dehydrogenase I chain J [Helicobacter felis ATCC 49179]
gi|315132296|emb|CBY82924.1| NADH dehydrogenase I chain J [Helicobacter felis ATCC 49179]
Length = 174
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ ++L FY F+ + + +F+VVT N +Y++ SL A V + F LL AEF+ ++ ++V
Sbjct: 1 MFETLAFYFFAALTLGMAFVVVTTTNILYAMTSLATAMVFVSAFFFLLDAEFLGVVQILV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEG 119
YVGAV+V + F +M L+ EV E + + + + + F+
Sbjct: 61 YVGAVVVMYAFGMMFLNASQEVQERAHAPKIPALLVMVLAVVLVALLGAPFIAQYAYTLQ 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
E +N + IG VL+++Y E+ F+LL++++GAI L+
Sbjct: 121 ESLSPSVDISNTKLIGYVLFSKYLVAFEVGAFMLLVALVGAIASALKKSPK 171
>gi|228942440|ref|ZP_04104978.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228955540|ref|ZP_04117544.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228961557|ref|ZP_04123167.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228975373|ref|ZP_04135929.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228982009|ref|ZP_04142303.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
Bt407]
gi|229050965|ref|ZP_04194515.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH676]
gi|229130545|ref|ZP_04259501.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
BDRD-Cer4]
gi|229147834|ref|ZP_04276176.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
BDRD-ST24]
gi|229153458|ref|ZP_04281636.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus m1550]
gi|228630062|gb|EEK86713.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus m1550]
gi|228635662|gb|EEK92150.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
BDRD-ST24]
gi|228652884|gb|EEL08766.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
BDRD-Cer4]
gi|228722423|gb|EEL73818.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH676]
gi|228777770|gb|EEM26043.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
Bt407]
gi|228784355|gb|EEM32378.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228798175|gb|EEM45178.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228804162|gb|EEM50777.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228817281|gb|EEM63368.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar berliner ATCC 10792]
Length = 162
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L NN I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNVDFANESTQGSLPLHENNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|116619260|ref|YP_821416.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Candidatus
Solibacter usitatus Ellin6076]
gi|116222422|gb|ABJ81131.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Candidatus
Solibacter usitatus Ellin6076]
Length = 164
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 3/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F F+ +A++ + VV +PI S SL+ + A L+LLLGAEF+A ++VY
Sbjct: 1 MDVILFLTFAVIAVVCAINVVVQTHPISSALSLVGVMGSLAILYLLLGAEFIAAAQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F+IM+L+ E + R I L F +
Sbjct: 61 AGAIMVLFVFVIMLLNAGAETTKGRSYLIPGAPLLIVFLGLVAFFVQRIFPSATMVRFGG 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
F G +IG L+T Y P E++ ++L++++GAIVL +
Sbjct: 121 ---FTGGGPRDIGNALFTTYLLPFEVTSLLILIAIVGAIVLARKE 162
>gi|269139722|ref|YP_003296423.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Edwardsiella
tarda EIB202]
gi|267985383|gb|ACY85212.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Edwardsiella
tarda EIB202]
gi|304559589|gb|ADM42253.1| NADH-ubiquinone oxidoreductase chain J [Edwardsiella tarda FL6-60]
Length = 190
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + +A++++ V+T NP++++ LI + + A +F LGA F + ++VY G
Sbjct: 2 EFAFYAAALVAVLATIRVITHTNPVHALLYLIVSLLAVAAVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + G + L + +++ + + + +G + +
Sbjct: 62 AIMVLFVFVVMMLNLGHSVVEQERAWLKPGVWIGPALLSLILLAVVLYAISTLQGGV--I 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E+ +LL ++ A + H
Sbjct: 120 DGRAVDAKAVGIALFGPYVLAVELVSMLLLAGLVVAFHIGREHHPG 165
>gi|325610525|gb|ADZ36471.1| NADH dehydrogenase subunit 6 [Franklinia alatamaha]
Length = 176
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ F+ I+SS V+ NPIYS FSL FV + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGFVLILSSLGVILFPNPIYSAFSLGLVFVCISFFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGITSMVCTSIFVSLITTILDTSWYGIIWA 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|317130738|ref|YP_004097020.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacillus
cellulosilyticus DSM 2522]
gi|315475686|gb|ADU32289.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacillus
cellulosilyticus DSM 2522]
Length = 164
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 78/167 (46%), Gaps = 5/167 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + F + + +AI S LV+ +R + V S+ F F AGL+ LLGA+F+ +I ++
Sbjct: 1 MNTQMIIFLILAILAIACSVLVLQLRRISHRVVSMAFVFFAIAGLYFLLGADFIGIIQII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GAV + F+F +MM + +R FIG+ + + +
Sbjct: 61 VYAGAVTILFIFGMMMTEHRNVTFSAHPRRAHRVLSFIGVATLLGFMLYGILGL-----D 115
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
L E IG LY Y GF+L ++IGAIV+ +
Sbjct: 116 LPASEPYEGTAEAIGLELYGHYVVAFLAMGFLLTAALIGAIVIARKE 162
>gi|228903768|ref|ZP_04067885.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
IBL 4222]
gi|228968416|ref|ZP_04129409.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228791275|gb|EEM38884.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228855857|gb|EEN00400.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
IBL 4222]
Length = 162
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L NN I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANESTQGSLPLHENNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|121720667|ref|YP_001001587.1| NADH-plastoquinone oxidoreductase subunit 6 [Nuphar advena]
gi|221272334|sp|A1XG08|NU6C_NUPAD RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|84682258|gb|ABC60512.1| NADH-plastoquinone oxidoreductase subunit 6 [Nuphar advena]
Length = 177
Score = 84.3 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV + NPIYS FS V + ++ + FVA L++Y
Sbjct: 7 IHDILLVSLGSGLIVGGLGVVLLTNPIYSAFSSGLVLVCISLFYIPSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V LF +M ++ GF I + + +
Sbjct: 67 VGAINVLILFAVMFMNGSEYYNSFHFWTIGDGFTSVVCTSIFFSLIATIPNTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S + + +NV+ IG L T + P E+ ILL+S++GAI + R
Sbjct: 127 TRSNQIIEQDLTSNVQQIGIHLSTDFYLPFELISIILLVSLVGAIAMARRE 177
>gi|200004020|ref|YP_002221355.1| NADH dehydrogenase subunit 6 [Blastocystis sp. DMP/02-328]
gi|156617367|gb|ABU87587.1| NADH dehydrogenase subunit 6 [Blastocystis sp. BT-1]
gi|156617370|gb|ABU87589.1| NADH dehydrogenase subunit 6 [Blastocystis sp. DMP/02-328]
Length = 201
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FF F+ + IIS F+ ++V N +Y+V LI AF + + LL +++A++ +++Y
Sbjct: 1 MSNFFFNFFASILIISVFMTISVNNAVYAVLFLILAFFSTMCILFLLNIDYLALLFILIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF------- 115
VGA+ + FLF++MML I I K F+ ++ ++ +F
Sbjct: 61 VGAITILFLFVVMMLKIKINDKNTTKFLSFINIIISCLIIYNVLCNVQILNIFLPTTTTA 120
Query: 116 ---SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
++ +N++ +G+VL+T Y + ++GF+LL+ MI AI+L R I+
Sbjct: 121 LETLTYQNWFSKLYYVDNIKMLGQVLFTTYYFYFILAGFVLLVGMISAILLSKESNRTIR 180
Query: 173 R-QDISKQLESNPDNSIVMV 191
R Q + +QL N++ +V
Sbjct: 181 RYQLVYQQLSREVSNAVFLV 200
>gi|133900530|gb|ABO41431.1| NADH dehydrogenase subunit 6 [Podostemum ceratophyllum]
Length = 179
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFFILVFCDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + F + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILEFESIPLLPTQKQTAYLKYTVYAGKVRP 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + L +S ILL++MIGAIVL + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFFWLLLSSLILLVAMIGAIVLTMHRTTKVKRQDLFRRNAIDF 177
>gi|260887653|ref|ZP_05898916.1| NADH dehydrogenase I, J subunit [Selenomonas sputigena ATCC 35185]
gi|330838012|ref|YP_004412592.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Selenomonas
sputigena ATCC 35185]
gi|260862669|gb|EEX77169.1| NADH dehydrogenase I, J subunit [Selenomonas sputigena ATCC 35185]
gi|329745776|gb|AEB99132.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Selenomonas
sputigena ATCC 35185]
Length = 167
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 69/161 (42%), Gaps = 4/161 (2%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYL + + + + VV + +++ L F+ A L+ LGA+F+ L++Y G V
Sbjct: 9 AFYLLAAVTLAGALGVVLAKKLVHAALLLTVTFIGIACLYFQLGADFLGAAQLMIYAGGV 68
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
V + +M+ + +F +AA L V+
Sbjct: 69 AVLIVLGVMLT----RHTPGEETSPDNARWFAAPVAAALFFAVVFSAVYVTPFAEVMEAP 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
GN++E + ++ +Y E++ +LL +++GAIVL
Sbjct: 125 AGNSIEKLADLMLGEYVMTFELAAALLLAALVGAIVLAKEE 165
>gi|228924029|ref|ZP_04087305.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228835519|gb|EEM80884.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 162
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L NN I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNVDFANESTQGSLPLHENNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|242310563|ref|ZP_04809718.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239522961|gb|EEQ62827.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 187
Score = 84.3 bits (207), Expect = 9e-15, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY FS + + +VVT +N +Y++ +L + +G F LLGAEF+ ++ +VV
Sbjct: 1 MFEAIAFYTFSALTLAMFLIVVTTKNILYALSALAAGMIFVSGFFFLLGAEFLGVVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAVI + F +M D E + L +++ + + +
Sbjct: 61 YTGAVIALYAFAMMFFDAQKLQNERIENPKLLFLLVGLGALLLVLIVVAPIIAQNLSQIS 120
Query: 122 SRLVF--KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
++ + NV+ +G VL+T++ P EI+ +LL++MI I+L +
Sbjct: 121 PQIPVKEEVGNVQMVGYVLFTKFLIPFEIAAIMLLVAMIAGIILAGK 167
>gi|167630270|ref|YP_001680769.1| proton-translocating NADH-ubiquinone oxidoreductase, chain j
[Heliobacterium modesticaldum Ice1]
gi|167593010|gb|ABZ84758.1| proton-translocating NADH-ubiquinone oxidoreductase, chain j
[Heliobacterium modesticaldum Ice1]
Length = 170
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 3/167 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + FY + + ++S+ VV +++ ++S L +F+ AG+++LL A+F+A + ++VY
Sbjct: 6 IYAGAFYGLAALTLLSAAGVVFLKDIVHSALLLAASFIGVAGIYVLLNADFLAAVQVLVY 65
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV + F +M+ R + AA + F+ +
Sbjct: 66 GGAVAILIAFGVMLTRRPHMKETNANNRW---VVWGAFTAAFTFAICGWAIAFTPFMPID 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ ++ I L + P E + +L +++IGAI+L +
Sbjct: 123 ASPAQVTAIDGIATQLLGDFVVPFEAAAILLTVALIGAIILAKGAKE 169
>gi|229112706|ref|ZP_04242242.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock1-15]
gi|228670838|gb|EEL26146.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock1-15]
Length = 162
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L NN I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNSVDFANESTQGSLPLHENNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|229175967|ref|ZP_04303464.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus MM3]
gi|228607561|gb|EEK64886.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus MM3]
Length = 162
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L N I
Sbjct: 63 MLTQHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANESTQGSLPLHEKNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|62161342|ref|YP_214970.1| NADH dehydrogenase subunit 6 [Montipora cactus]
gi|58220707|gb|AAW67970.1| NADH dehydrogenase subunit 6 [Montipora cactus]
Length = 197
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F + S +V++ NPI+S+F LI F+ +A FL LG FVA++ L++YVGA+ +
Sbjct: 1 MLAFGVVGSGIMVISALNPIHSIFWLIVVFIGSAVFFLWLGISFVALMFLIIYVGAIAIL 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------------- 116
FLF+IM+L++ R + +I I S
Sbjct: 61 FLFVIMLLNLTDFPPAFRLGGEADMTNYIPIGLVVGTFFFSEVASSWLIIGGPYTPRVFL 120
Query: 117 -------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ L + K N+E +G++LY Y ++ FILL++M+GAIVL
Sbjct: 121 GAEIGRAWDLALPWFLMKYQNMEALGRILYIACYYLFILASFILLVAMVGAIVLTQEIGS 180
Query: 170 D----IKRQDISKQLES 182
+ +KRQDI Q
Sbjct: 181 EIGPVVKRQDIFFQTSR 197
>gi|189468081|ref|ZP_03016866.1| hypothetical protein BACINT_04475 [Bacteroides intestinalis DSM
17393]
gi|189436345|gb|EDV05330.1| hypothetical protein BACINT_04475 [Bacteroides intestinalis DSM
17393]
Length = 171
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + + S L VT R + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAVFITVCSILTVTTRRMVRSATYLLFTLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + + KR L + + +IV
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRTIDKLKRSKLMAGLGATVGGAIIVLFITLK--HKFIVT 121
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
+ L N++ IG + + Y P E +LL ++G +V+ +
Sbjct: 122 TDLAPLEINIKTIGHSMLSSDKYGYLLPFEAVSILLLACIVGGLVIARKR 171
>gi|290489844|gb|ADD31329.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Aucuba
japonica]
Length = 175
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ + VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGALGVVLLPNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTIGDGVTSMVCTSIFVSLMTTIPDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIVEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|109156477|ref|YP_654410.1| NADH dehydrogenase subunit 6 [Siderastrea radians]
gi|108744166|gb|ABG02384.1| NADH dehydrogenase subunit 6 [Siderastrea radians]
Length = 197
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F + S +V++ NPI+S+F LI F +A FL LG FVA++ L++YVGA+ +
Sbjct: 1 MLAFGVVGSGIMVISALNPIHSIFWLIVVFTGSAVFFLWLGIAFVALMFLIIYVGAIAIL 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------------- 116
FLF+IM+L++ R + ++ I S
Sbjct: 61 FLFVIMLLNLTDFPPAFRLGGEADMTNYVPIGLVIGTFFFSEVASSWLIIGGPYTHRAFF 120
Query: 117 -------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + K N+E +G++LY Y ++ ILL++MIGAIVL
Sbjct: 121 GAEIRKAWDLAAPWFLMKYQNMEALGRILYIACYYLFILASLILLVAMIGAIVLTQEVGS 180
Query: 170 D----IKRQDISKQLES 182
+ +KRQDI Q
Sbjct: 181 EVGPMVKRQDIFFQTSR 197
>gi|320160248|ref|YP_004173472.1| NADH-quinone oxidoreductase subunit J [Anaerolinea thermophila
UNI-1]
gi|319994101|dbj|BAJ62872.1| NADH-quinone oxidoreductase chain J [Anaerolinea thermophila UNI-1]
Length = 179
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ F++ +F+A+ + ++ RN +YS L+ F A L+L+LGA F+A+ + VY G
Sbjct: 2 TIVFFVLAFVAVGCAISMLITRNAVYSALFLVLNFATVAILYLILGAPFIALSQITVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+VIV FLF++M+L + + + +G++ A + S G ++
Sbjct: 62 SVIVLFLFVVMLLGAERLPGAEPLRWQRFIAMGLGLVLAVNLGW-SVVQRAGDLGVITAP 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+G+VL+TQY P++I FILL++++GA+VL +R+ K
Sbjct: 121 EKGFGAPVEVGRVLFTQYVLPIQIVAFILLVAVVGAVVLARSEEISRRRELYRK 174
>gi|302559056|ref|ZP_07311398.1| NADH dehydrogenase subunit [Streptomyces griseoflavus Tu4000]
gi|302476674|gb|EFL39767.1| NADH dehydrogenase subunit [Streptomyces griseoflavus Tu4000]
Length = 210
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 2/162 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ + VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 31 EIAFLLVGLVTFGAAVITVTTRQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 90
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + AA +V + +L
Sbjct: 91 SVVVLLLFGLMLTRAPIGRSPDADSGNRRVALAVAVAAAGALVWVVVDAFRTTWIDLDGA 150
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ E G L+ + P E +LL +++GAIVL R
Sbjct: 151 PA--GSTEVTGASLFQNWVLPFEALSVLLLAALVGAIVLSRR 190
>gi|156598391|gb|ABU85455.1| NADH-plastoquinone oxidoreductase subunit 6 [Musa acuminata]
Length = 176
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + + I+ VV + NPIYS FSL V + ++ + FVA L++Y
Sbjct: 7 IHDILVAFLGSVLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYIPSNSFFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGAV V +F +M ++ + G IL + +
Sbjct: 67 VGAVNVLIIFAVMFMNGSEYSNDSYFWTIGDGVTSLVCTSILFSLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +NV+ IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TRSNQIIEQDLISNVQQIGIHLSTDFYLPFELISIILLVSLIGAITMAR 175
>gi|229105886|ref|ZP_04236512.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock3-28]
gi|229118790|ref|ZP_04248140.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock1-3]
gi|228664660|gb|EEL20152.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock1-3]
gi|228677545|gb|EEL31796.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock3-28]
Length = 162
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + FS E L N I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNSIDFSNESTQGSLPLHEKNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|229181542|ref|ZP_04308868.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
172560W]
gi|228601910|gb|EEK59405.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
172560W]
Length = 162
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/157 (28%), Positives = 84/157 (53%), Gaps = 1/157 (0%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F
Sbjct: 2 FAIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFG 61
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVEN 133
IM+ + E R FF + ++ A N + F+ E L NN
Sbjct: 62 IMLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNVDFANESTQGSLPLHENNTLQ 120
Query: 134 IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
IG +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 121 IGTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|229032925|ref|ZP_04188880.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH1271]
gi|228728470|gb|EEL79491.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH1271]
Length = 162
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L N I
Sbjct: 63 MLTQHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANESTQGSLPLHEKNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|228988518|ref|ZP_04148607.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229142033|ref|ZP_04270558.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
BDRD-ST26]
gi|229199416|ref|ZP_04326081.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus m1293]
gi|228584130|gb|EEK42283.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus m1293]
gi|228641322|gb|EEK97628.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
BDRD-ST26]
gi|228771234|gb|EEM19711.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 162
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L N I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANESTQGSLPLHEKNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|226944926|ref|YP_002799999.1| NADH dehydrogenase subunit J [Azotobacter vinelandii DJ]
gi|226719853|gb|ACO79024.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain J [Azotobacter
vinelandii DJ]
Length = 166
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FYL + A+ S+ V+T NP++++ LI + + A F LGA F ++ ++VY G
Sbjct: 2 EFAFYLSAGFAVASTLRVITHTNPVHALLYLIVSLLAVAMCFFSLGAPFAGVLEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ VAE ++ G + G +++ V + + +
Sbjct: 62 AIMVLFVFVVMMLNLGPAVAEQERQWLKPG-IWAGPTLLSVLLLVQLLYVLFGTSDGALV 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G LY Y +E++ +LL +++ A L R ++
Sbjct: 121 GQQTVDAKAVGTALYGPYLLAVELASMLLLAALVAAYHLGRREAKE 166
>gi|21222987|ref|NP_628766.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces coelicolor A3(2)]
gi|256785900|ref|ZP_05524331.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces lividans TK24]
gi|289769793|ref|ZP_06529171.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces lividans TK24]
gi|10129700|emb|CAC08257.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces coelicolor A3(2)]
gi|289699992|gb|EFD67421.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces lividans TK24]
Length = 197
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + + ++ + VT R +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 17 EIAFLLVGLVTLAAAVVTVTTRQLVHAALWLVVALGGLAVEYLLLTAEFIAWVQVLIYVG 76
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV+V LF +M+ I + + + + +A +V + +L
Sbjct: 77 AVVVLILFGLMLTRAPIGRSPDADSGNRWAALTVAVASAAALVWVVVDAFRTTWIDLDGP 136
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
V G L+ + P E +LL +++GAIVL + +
Sbjct: 137 AAGSTAVT--GASLFQNWVLPFEALSVLLLAALVGAIVLSRKAK 178
>gi|299138533|ref|ZP_07031712.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Acidobacterium sp. MP5ACTX8]
gi|298599779|gb|EFI55938.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Acidobacterium sp. MP5ACTX8]
Length = 168
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 2/167 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
MQ+ F +F +A++ + ++ R+PI S SLI ++ A L+ LGAEF+A ++VY
Sbjct: 1 MQTALFIIFGLLAVLGALNLLFQRHPINSALSLIVVMMSLAVLYWSLGAEFLAAAQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI--GILAAELIVCASNFMVFSAEGE 120
GA++V F+F+IM+L+ E + ++ I V S
Sbjct: 61 SGAIMVLFVFVIMLLNAGEEERTHGSQIAYIAGIPGAAAIFCLLTFVFLSEKKQLGTTQL 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
L +N+ I L+T P E++ ++L++++GA+VL +
Sbjct: 121 GGYLTSAVSNITEISHTLFTSLLLPFEVTSILILVAILGAVVLARKE 167
>gi|294056105|ref|YP_003549763.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Coraliomargarita akajimensis DSM 45221]
gi|293615438|gb|ADE55593.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Coraliomargarita akajimensis DSM 45221]
Length = 193
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY+FS + ++S+ L+V + + +I AF+ A LF+LL A +A + +VVY
Sbjct: 1 MLDILFYVFSAITLLSALLMVVSPSAVNGALCMIVAFLGTAALFVLLEAYLLAALQVVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--------- 113
GAV+V FLFIIM+LD+D K A +I+ + F+
Sbjct: 61 AGAVMVLFLFIIMLLDVDKGAGASDMKDKVSLGAASMGFALVVILVTTLFIGSGQLPEPE 120
Query: 114 ---VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ + +++ G L+T+Y P +++GF+LL M+G IV+ +
Sbjct: 121 LRDTVANPTGATGGFEFSTAMKSFGYSLFTKYMLPFQVAGFLLLAGMVGVIVVSKK 176
>gi|302536207|ref|ZP_07288549.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces sp. C]
gi|302445102|gb|EFL16918.1| NADH dehydrogenase subunit NuoJ2 [Streptomyces sp. C]
Length = 212
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ + VT + +++ L+ A A +LLL AEF+A + +++Y+G
Sbjct: 29 EIAFLLVGLATLGAAVITVTTKQLVHAALWLVVALGGIAVEYLLLTAEFIAWVQVLIYLG 88
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + A +V + +L
Sbjct: 89 SVVVLLLFGLMLTKAPIGRSPDADSGNRWVALGVAGAAGAALVWVVADAFRTTWIDLDGP 148
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
V G++L+ + P E +LL ++IGAIVL R
Sbjct: 149 AQGSTKVS--GEILFQHWVLPFEALSVLLLAALIGAIVLSRR 188
>gi|229014462|ref|ZP_04171580.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus mycoides DSM
2048]
gi|229020512|ref|ZP_04177259.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH1273]
gi|229026729|ref|ZP_04183066.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH1272]
gi|229063944|ref|ZP_04200243.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH603]
gi|229136109|ref|ZP_04264863.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
BDRD-ST196]
gi|229170001|ref|ZP_04297694.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH621]
gi|228613519|gb|EEK70651.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH621]
gi|228647354|gb|EEL03435.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
BDRD-ST196]
gi|228716350|gb|EEL68060.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH603]
gi|228734577|gb|EEL85234.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH1272]
gi|228740783|gb|EEL91034.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus AH1273]
gi|228746812|gb|EEL96697.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus mycoides DSM
2048]
Length = 162
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 1/152 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + FS + L NN I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNSIDFSNQSTQGSLPLHENNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
G +LY++Y P E++ ILL++++GAI+L +
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKK 153
>gi|325610509|gb|ADZ36457.1| NADH dehydrogenase subunit 6 [Schima khasiana]
Length = 176
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ F+ I++S V+ NPIYS FSL FV + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGFVLILASLGVILFPNPIYSAFSLGLVFVCISFFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGITSMVCTSIFVSLITTILDTSWYGIIWA 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|307327970|ref|ZP_07607151.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
violaceusniger Tu 4113]
gi|306886275|gb|EFN17280.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
violaceusniger Tu 4113]
Length = 194
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 2/171 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L + ++ L VT + +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 21 EIAFLLVGIATLGAAVLTVTTKQLVHAALWLVVALGGIAVEYLLLTAEFIAWVQVLIYVG 80
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + AA ++V + EL +
Sbjct: 81 SVVVLLLFGLMLTKAPIGPSPDADSGNRPAALAVAVAAAGVLVWVVVDAFRTTWIELDKG 140
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
V V G+ L+ + P E +LL +++GAIVL + Q
Sbjct: 141 VQGSTAVS--GESLFRHWVLPFEALSVLLLAALVGAIVLSRKTAEPRDAQS 189
>gi|167463147|ref|ZP_02328236.1| NADH dehydrogenase subunit J [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322383092|ref|ZP_08056919.1| hypothetical protein PL1_1941 [Paenibacillus larvae subsp. larvae
B-3650]
gi|321152754|gb|EFX45380.1| hypothetical protein PL1_1941 [Paenibacillus larvae subsp. larvae
B-3650]
Length = 173
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F F+ AI + +VT IY V S F F++ AGL++LL AEFVA + +++Y GA+
Sbjct: 16 LFLFFAMCAIGGAIYMVTFTKVIYMVLSAAFTFISLAGLYVLLEAEFVAFVQVLIYAGAI 75
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ +F IMM +K G + + L + F +
Sbjct: 76 SILMIFGIMMT-----KHRAEEKPGGRVAQKVLTGIGCLALFGLLFYAIQQSTFSPGELR 130
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +N IGK+L++ + P EI +L ++ IGAIV+ R
Sbjct: 131 EEDNTLEIGKLLFSGHVIPFEIMSVLLTVAFIGAIVIAKRE 171
>gi|228917903|ref|ZP_04081439.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228930300|ref|ZP_04093306.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228949014|ref|ZP_04111287.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229094403|ref|ZP_04225476.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock3-42]
gi|229124797|ref|ZP_04253976.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
95/8201]
gi|228658672|gb|EEL14333.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
95/8201]
gi|228689004|gb|EEL42830.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock3-42]
gi|228810770|gb|EEM57118.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228829359|gb|EEM74990.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228841700|gb|EEM86811.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 162
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L N I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANESAQGSLPLHEKNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|257852682|gb|ACV71353.1| NADH dehydrogenase subunit 6 [Rhizanthes lowii]
Length = 176
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 9/175 (5%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
F+V +NP++SV I F +GL L LG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GFMVARAKNPVHSVLFSILVFRETSGLLLFLGLDFSAMIFPVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM---------VFSAEGELSRLVFKGN 129
I I R S IG++ + + + + + +
Sbjct: 61 IQIAEIHEEVLRYLPFSGLIGLILWWEMFFILDTIPLIKQKRKTTYLGYKVYAGKIISWT 120
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y + +LL++MIGAIVL + RQD+ ++ +
Sbjct: 121 NLETLGNLLYTYYFVWFLVPSILLLVAMIGAIVLTMHRTTHGVRQDLFRRNAIDF 175
>gi|268678789|ref|YP_003303220.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Sulfurospirillum deleyianum DSM 6946]
gi|268616820|gb|ACZ11185.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Sulfurospirillum deleyianum DSM 6946]
Length = 184
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 89/166 (53%), Gaps = 1/166 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY+FS + + +VV +N +Y++ +L + +G F +L AEF+ ++ +VV
Sbjct: 1 MYETVAFYIFSILTLGMFGIVVMSKNALYAMSALAGGMIFISGFFFILDAEFLGVVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA++ + F +M D +V+E + + + I + A ++ +V +
Sbjct: 61 YSGAIMALYAFGMMFFDTTRDVSEKMRSKKIAYTLSI-VSAVLIVAILCMPLVSESIEAS 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ N++ +G +L+T+Y P E++ +LL++MI IVL +
Sbjct: 120 YPAIENVGNIQMVGLILFTKYLVPFELAAIMLLVAMISGIVLASKK 165
>gi|228936578|ref|ZP_04099373.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823093|gb|EEM68930.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 162
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L N I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYLAVNNIDFANESAQGSLPLHEKNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|189095616|ref|YP_001936200.1| NADH dehydrogenase subunit 6 [Keratoisidinae sp. BAL208-1]
gi|148540946|gb|ABQ86195.1| NADH dehydrogenase subunit 6 [Keratoisidinae sp. BAL208-1]
Length = 183
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 89/165 (53%), Gaps = 7/165 (4%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 64 AILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIG 116
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
N+ IG LYT Y + ++ +LL++M+GAI+L +
Sbjct: 117 SRTNIGAIGSHLYTTYYELVLVASLVLLVAMVGAILLAKQPNTPS 161
>gi|71892258|ref|YP_277992.1| NADH dehydrogenase I chain J [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|71796364|gb|AAZ41115.1| NADH dehydrogenase I chain J [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 183
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 2/162 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FY+ AI+S+ V+ NP+ ++ LI +F++ + F LGA F A + ++VY G
Sbjct: 2 TALFYISGITAILSTICVILHYNPMRALLYLIVSFLSISCNFFSLGASFAAALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDID--IEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
A+++ F+F IMML+ I + + L ++ ++ F + +
Sbjct: 62 AIMILFVFAIMMLNTKNIIFGIQKESRFLNPILCCGSALLVGILFAVLLYISFVLKDDFI 121
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ + + +G L+ Y +E++ F+LL ++I L
Sbjct: 122 NVNNSIIDSKQVGVALFGPYILTVELASFLLLGALISVFHLS 163
>gi|62161415|ref|YP_214918.1| NADH dehydrogenase subunit 6 [Anacropora matthai]
gi|58220693|gb|AAW67957.1| NADH dehydrogenase subunit 6 [Anacropora matthai]
Length = 197
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F + S +V++ NPI+S+F LI F+ +A FL LG FVA++ L++Y+GA+ +
Sbjct: 1 MLAFGVVGSGIMVISALNPIHSIFWLIVVFIGSAVFFLWLGISFVALMFLIIYMGAIAIL 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------------- 116
FLF+IM+L++ R + +I I S
Sbjct: 61 FLFVIMLLNLTDFPPAFRLGGEADMTNYIPIGLVVGTFFFSEVASSWLIIGGPYTPRVFL 120
Query: 117 -------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ L + K N+E +G++LY Y ++ FILL++M+GAIVL
Sbjct: 121 GAEIGRAWDLALPWFLMKYQNMEALGRILYIACYYLFILASFILLVAMVGAIVLTQEIGS 180
Query: 170 D----IKRQDISKQLES 182
+ +KRQDI Q
Sbjct: 181 EIGPVVKRQDIFFQTSR 197
>gi|313156921|gb|EFR56359.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Alistipes sp.
HGB5]
Length = 169
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + +S+ L VT + + + L+F AG++ L F+ + L++
Sbjct: 4 TLELIVFTVLAVFTAVSALLAVTTKRILRAATYLLFVLFGTAGIYFQLNYSFLGAVQLLI 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + V ++F I++ + +E K F F+G+ A L + ++ +
Sbjct: 64 YAGGITVLYVFSILLTSSQGDKSEDLKGYKF----FVGLAATLLSLGVCLYVTLGHDFRP 119
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
S V +V+ IG L + Y P E+ +LL ++G I++ +
Sbjct: 120 SHFVHGELHVQTIGHALMSSGKYGYVLPFEVISILLLACIVGGILIARKR 169
>gi|302870007|ref|YP_003838644.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Micromonospora aurantiaca ATCC 27029]
gi|302572866|gb|ADL49068.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Micromonospora aurantiaca ATCC 27029]
Length = 182
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + +A+ + LVV R+ + + L+ AG +L+L AE VA + ++
Sbjct: 1 MTGADVLLLALGAVAVGAGALVVATRHLVRAGLWLVVCLGALAGDYLVLTAELVAWVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGAV+V LF +M+ I ++ + G+ + L V + +S
Sbjct: 61 IYVGAVVVLLLFAVMLTRAPIGPSDDLDRPGWAAALVGAGSGLGLAVLLIDAFRWSRVD- 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G+ L+ + P E+ +LL +++GAIVL
Sbjct: 120 ----LPVAGTAERLGEQLFRSWVLPFEVLSVLLLAALVGAIVLSR 160
>gi|170727212|ref|YP_001761238.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Shewanella
woodyi ATCC 51908]
gi|169812559|gb|ACA87143.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Shewanella
woodyi ATCC 51908]
Length = 205
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 18/185 (9%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F + + +IS+ L VT N ++++ L+ + A +F L G+ F A + ++VY
Sbjct: 1 MIEIIFITTAIVCVISALLTVTAHNAVHALLYLVTMMIAIALIFFLFGSPFAAALQIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------ 116
GAV+V F+F+ MML + K L + +L A ++V + +
Sbjct: 61 AGAVMVLFVFVTMMLHQGEQSIIDEKTLFSLKTAKGPLLLAVILVIELLLIGITPLDNSP 120
Query: 117 ------------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ S +V+++ K LY Y + I+ +LL S+I AI +
Sbjct: 121 SLTPLNTVNSESQQLSTSSKTPSLTSVKSLAKQLYGPYKLLVIIAAMLLLSSLIAAIHIA 180
Query: 165 LRHRR 169
+ R
Sbjct: 181 RKSSR 185
>gi|315501488|ref|YP_004080375.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Micromonospora sp. L5]
gi|315408107|gb|ADU06224.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Micromonospora sp. L5]
Length = 182
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 5/165 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + +A+ + LVV R+ + + L+ AG +L+L AE VA + ++
Sbjct: 1 MTGADVLLLALGAVAVGAGALVVATRHLVRAGLWLVVCLGALAGDYLVLTAELVAWVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGAV+V LF +M+ I ++ + G+ + L V + +S
Sbjct: 61 IYVGAVVVLLLFAVMLTRAPIGPSDDLDRPGWAAALVGAGSGLGLAVLLIDAFRWSRVD- 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G+ L+ + P E+ +LL +++GAIVL
Sbjct: 120 ----LPVAGTAERLGEQLFRSWVLPFEVLSVLLLAALVGAIVLSR 160
>gi|89895328|ref|YP_518815.1| NADH dehydrogenase I chain J [Desulfitobacterium hafniense Y51]
gi|89334776|dbj|BAE84371.1| NADH dehydrogenase I chain J [Desulfitobacterium hafniense Y51]
Length = 163
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 80/159 (50%), Gaps = 2/159 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F++F+ +A+ S++ VVT +N ++S F L +F A L++LL AE++A + L+VY GA+
Sbjct: 1 MFFIFAIIAVASAWGVVTSKNIVHSAFFLALSFAGVAVLYVLLNAEYLAAVQLLVYAGAI 60
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ +F +M+ + + + L IV A + S L+
Sbjct: 61 SIMVIFAVMLTLRGDVAESSPVTKKWTQGALVSALVF--IVLALVILTNSDWRILAMPAL 118
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
G + K+L + Y P E + ++ +++IGA+++
Sbjct: 119 AGGTTVELSKLLLSWYMVPFEAAAILITVALIGAVIIAK 157
>gi|283795021|ref|YP_003359412.1| NADH dehydrogenase subunit 6 [Olea europaea]
gi|330850796|ref|YP_004376474.1| NADH dehydrogenase subunit 6 [Olea europaea subsp. europaea]
gi|281428740|gb|ADA69979.1| NADH dehydrogenase subunit 6 [Olea europaea]
gi|291059307|gb|ADD72143.1| NADH-plastoquinone oxidoreductase subunit 6 [Olea europaea]
gi|328795486|emb|CBR30368.1| NADH dehydrogenase subunit 6 [Olea europaea subsp. europaea]
Length = 176
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ S VV + NPIYS FSL + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGSLGVVLLPNPIYSAFSLGLVLFCISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ + +F +M + + G I + + + + +
Sbjct: 67 VGAINILIIFAVMFMSGSEYYKDFHLWTVGDGVTSIVCTSLFISLITTIPDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAIAR 175
>gi|13518490|ref|NP_084848.1| NADH dehydrogenase subunit 6 [Lotus japonicus]
gi|23821907|sp|Q9BBP1|NU6C_LOTJA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|13359031|dbj|BAB33248.1| NADH dehydrogenase ND6 [Lotus japonicus]
Length = 176
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 6/170 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ I+ S VV + NPI+S FSL V + L++L + FVA L++
Sbjct: 6 TLHDFLLVFLGSGLILGSLGVVLLTNPIFSAFSLGLTLVCISLLYILSNSHFVAASQLLI 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAE 118
YVGA+ V +F +M ++ + R G I + +
Sbjct: 66 YVGAINVLIIFGVMFMNGSEYYQDFRLWTVGDGMTLMVCTSIFISLITTIPDTSWYGIIW 125
Query: 119 GELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL ++IGAIV+
Sbjct: 126 TTRSNQIIEQDLISTSQQIGIHLSTDFFLPFELISIILLAALIGAIVVAR 175
>gi|206890506|ref|YP_002248944.1| NADH-quinone oxidoreductase chain j [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742444|gb|ACI21501.1| NADH-quinone oxidoreductase chain j [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 171
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F F + S + +T +NP+++V L+ F++ A ++L L AEF+AM+ ++VY
Sbjct: 1 MIYFIFAYFCLATLGISIMSLTRKNPVHAVLWLLLLFLHVAVIYLFLNAEFLAMVQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF + +L R G IG+ ++ + + G+ +
Sbjct: 61 AGAILVMFLFTLFLLGARQLPKHKRYTSILEGRLLIGLSITATLLAVFSSIKAEYSGKYT 120
Query: 123 -RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ V N + IG +L+ +Y+ + I G ILL+ MI VL R + D
Sbjct: 121 IKYVHDVGNTKAIGAMLFNEYSLAVLILGVILLIPMIAVSVLAWRRKDDT 170
>gi|330850678|ref|YP_004376559.1| NADH-plastoquinone oxidoreductase subunit 6 [Ptilidium
pulcherrimum]
gi|302024807|gb|ADK89653.1| NADH-plastoquinone oxidoreductase subunit 6 [Ptilidium
pulcherrimum]
Length = 206
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
I+ S VV + + +YS F L F F A L+LLL ++FVA +++YVGA+ V +F +
Sbjct: 19 LILGSLGVVLLNDIVYSAFLLGFVFACVALLYLLLDSDFVAAAQVLIYVGAINVLIVFAV 78
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV------CASNFMVFSAEGELSRLVFKG 128
M+++ + + G + L++ + + + A+ + +
Sbjct: 79 MLINKNNPIIFFLVWTIGDGITSAICTSIFLLLNNTISNTSWSKIYLVAQLNKNTELITT 138
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSI 188
N+ IG L T++ P E+ ILL+++IGAI L + ++ +++ N +NSI
Sbjct: 139 ENIRRIGLELLTKFLIPFELMSIILLIALIGAITLARGEQV----INLEEEVLRNKNNSI 194
>gi|229187519|ref|ZP_04314660.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus BGSC
6E1]
gi|228595958|gb|EEK53637.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus BGSC
6E1]
Length = 162
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L N I
Sbjct: 63 MLTKHNA-ENESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANESAQGSLPLHEKNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E++ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELTSVILLVALVGAIILAKKDEKE 157
>gi|256422827|ref|YP_003123480.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chitinophaga
pinensis DSM 2588]
gi|256037735|gb|ACU61279.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chitinophaga
pinensis DSM 2588]
Length = 172
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 89/168 (52%), Gaps = 2/168 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ FYL S +AII++ +V+T +PI+++ L+ +F+ A +FL LGA F A + ++VY GA
Sbjct: 3 ILFYLSSAVAIIATMMVITRYHPIHALLYLVVSFLAIAMVFLSLGAPFAAALEVIVYAGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
++V F+F++MML++ E A K + + +++ + ++ +
Sbjct: 63 IMVLFIFVVMMLNLGKETAAQEKDWLRPAVWIGPGILTLILLMEMSILLL--APPQRDVA 120
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ LY +Y +E+ GF+L ++GA + + ++ + R
Sbjct: 121 MAVVTPRQVALSLYGEYIIAVELIGFLLTTGIVGAAHIGKQKKKSLHR 168
>gi|109156505|ref|YP_654319.1| NADH dehydrogenase subunit 6 [Agaricia humilis]
gi|108744068|gb|ABG02293.1| NADH dehydrogenase subunit 6 [Agaricia humilis]
Length = 197
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 24/197 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F + S +V++ NPI+S+F L+ F +A FL LG FVA++ L++YVGA+ +
Sbjct: 1 MLAFGVVGSGIMVISALNPIHSIFWLVVVFTGSAVFFLWLGIAFVALMFLIIYVGAIAIL 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------------- 116
FLF+IM+L++ R + ++ I S
Sbjct: 61 FLFVIMLLNLTDFPPAFRLGGEADMTNYVPIGLVIGTFFFSEVASSWLIIGGPYAHRALF 120
Query: 117 -------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + + K N+E +G+VLY Y ++ ILL++M+GAIVL
Sbjct: 121 GAEIRSAWDLAIPWFLMKYQNMEALGRVLYIACYYLFILASLILLVAMVGAIVLTQEVGS 180
Query: 170 D----IKRQDISKQLES 182
+ +KRQDI Q
Sbjct: 181 EAGPMVKRQDIFFQTSR 197
>gi|182412572|ref|YP_001817638.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Opitutus
terrae PB90-1]
gi|177839786|gb|ACB74038.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Opitutus
terrae PB90-1]
Length = 211
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 1/169 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + F L + + + V+ + I +V L+ V AGL+ L + F+A++ +++Y
Sbjct: 10 IVAAVFALAIGTTLAGALIAVSSQRIIRAVTGLMICCVGLAGLYYFLNSPFLALMEILIY 69
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V +F +M+ + D + R F + +++A + + + +
Sbjct: 70 VGAVCVTIVFGVMLAEPD-WPVNLKHPRAFHKTLLAALVSAAIGGGLAGLALHAPWPAQP 128
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+V IG L T Y++ E+ +LL++++GA+V+ R
Sbjct: 129 VQTVNDGSVAAIGTSLLTTYSFVFELISLVLLVAILGALVIARAGRSRT 177
>gi|297585411|ref|YP_003701191.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacillus
selenitireducens MLS10]
gi|297143868|gb|ADI00626.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacillus
selenitireducens MLS10]
Length = 165
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q +FF + + +AI + +++ + + V S+ F+F AGL+ LLGAEF+ +I ++
Sbjct: 1 MTAQMIFFTILALIAITGAVMMMLLTTISHRVVSMWFSFFAVAGLYFLLGAEFIGIIQIM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGA+ + F+F +MM D E + I + I+ F
Sbjct: 61 VYVGAITILFVFGMMMTDHKTVSFEKDPRTAHNVIGTISAVGVLGILLYGIFS----MDL 116
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ V IG LY Y F+L ++IGAIV+ +
Sbjct: 117 PGNAQPEVTTVHAIGMDLYGHYFVAFIAVAFLLTAALIGAIVIARKE 163
>gi|110598461|ref|ZP_01386732.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Chlorobium
ferrooxidans DSM 13031]
gi|110339911|gb|EAT58415.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Chlorobium
ferrooxidans DSM 13031]
Length = 173
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ FY+F+ + ++S+ VV RN IYS F+L+F F A L++ L A+F+A+ +VVYVG
Sbjct: 8 TVIFYIFAAITVLSAAFVVFTRNVIYSAFALLFTFFGVAALYVFLSADFIAVTQVVVYVG 67
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V LF +M + + + K L +L +I + S
Sbjct: 68 GILVLLLFGVMFTNS---IMNAKPKSDVLHIIPGTLLLLAMIGALLYTFYTTHSWMPSET 124
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGF 151
+ +G+ VE IG ++Y P E++
Sbjct: 125 MLQGSIVERIGFETMSRYVLPFEMASI 151
>gi|109156406|ref|YP_654397.1| NADH dehydrogenase subunit 6 [Porites porites]
gi|108744152|gb|ABG02371.1| NADH dehydrogenase subunit 6 [Porites porites]
Length = 197
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 24/197 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ F I S +V++ NPI+S+F L+ F +A FL LG FVA++ L++YVGA+ +
Sbjct: 1 MLGFGIIGSGIMVISALNPIHSIFWLVVVFTGSAVFFLWLGIAFVALMFLIIYVGAIAIL 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS------------- 116
FLF+IM+L++ R + ++ I S
Sbjct: 61 FLFVIMLLNLTDFPPAFRLGGEADMTNYVPIGLLIGTFFFSEVASSWLIIGGSYTHRAFF 120
Query: 117 -------AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + K N+E +G++LY Y ++ F+LL++MIGAIVL
Sbjct: 121 GAEISRAWDLATPWFLMKYQNMEALGRILYITCYYLFILASFVLLVAMIGAIVLTQEVGS 180
Query: 170 D----IKRQDISKQLES 182
+ +KRQDI Q
Sbjct: 181 EVGPLVKRQDIFFQTSR 197
>gi|320160453|ref|YP_004173677.1| putative NADH-quinone oxidoreductase subunit J [Anaerolinea
thermophila UNI-1]
gi|319994306|dbj|BAJ63077.1| putative NADH-quinone oxidoreductase chain J [Anaerolinea
thermophila UNI-1]
Length = 172
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F L + + + S+ +VV R I+S F LI A A F L A F A+I +
Sbjct: 1 MSALQIVFLLIALLTLFSASMVVFARKTIHSAFWLILALFGVAATFATLEASFFAVIQVA 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGF-LGSFFIGILAAELIVCASNFMVFSAEG 119
VY+GA+ + +F +M+ +E + G+ + + I +I +
Sbjct: 61 VYIGAIAILIIFAVMLTRRSMEETGDQLLPGWGWAALVVLIAFGGIIYLLLQWQGVFQAP 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
++ + I V+ +Y P E++ +L+ +MIGAI + ++
Sbjct: 121 QVLTAGGENLEALGIALVMPDRYVIPFEVASVLLVAAMIGAIYVAGDLKKRS 172
>gi|171914648|ref|ZP_02930118.1| NADH dehydrogenase subunit J [Verrucomicrobium spinosum DSM 4136]
Length = 187
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M ++ FYLFS + ++ +VV +RNP+ S SL+ +F A LF+ L A F+ +I ++VY
Sbjct: 1 MPAVLFYLFSALTLVFGLMVVVLRNPVASALSLVMSFAGLAALFISLDAYFIGIIQILVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV+V FLFIIM+LDI E + +G + I+ + + +
Sbjct: 61 AGAVMVLFLFIIMLLDIKAEALKKVNAFSVVGGALLAIVFIVQLGMILGGLEAGKKTVAD 120
Query: 123 RLVFKGNNVEN--------------------IGKVLYTQYAYPLEISGFILLLSMIGAIV 162
+ E +G L+ +Y + +++ G +LL+ IG ++
Sbjct: 121 VPIHFEAAAETQKLPTIKEDLAKKSLPDTKLVGMALFHRYPFQIQLMGALLLVGTIGVVI 180
Query: 163 LMLRH 167
L R
Sbjct: 181 LSKRE 185
>gi|296274494|ref|YP_003657125.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Arcobacter
nitrofigilis DSM 7299]
gi|296098668|gb|ADG94618.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Arcobacter
nitrofigilis DSM 7299]
Length = 190
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + FYLFS + I + V N +Y++ SL + + F LL A+F+ ++ +VV
Sbjct: 1 MFEIVAFYLFSILTIFMFGITVFTNNALYALSSLAAGMIFISAFFFLLNADFLGIVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAVI + F +M D EV E + G + F G+ A +V + +V +
Sbjct: 61 YTGAVIALYAFGMMFFDSMSEVKEKIQNPGLVF-LFSGLAALITVVAFLSPIVSNNIISE 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + N +++G VL+T++ P EI+ +LL++MIG I+L +
Sbjct: 120 YAIHPEYGNTQDVGVVLFTKFLVPFEIAAVMLLVAMIGGIILAGKK 165
>gi|298384969|ref|ZP_06994528.1| NADH dehydrogenase I, subunit 6 [Bacteroides sp. 1_1_14]
gi|298262113|gb|EFI04978.1| NADH dehydrogenase I, subunit 6 [Bacteroides sp. 1_1_14]
Length = 170
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + I S + VT + + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAAFIIAMSIMTVTTQRIVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + AE K+ FL F I +I+ + + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRAEKLKRSRFLAGLFTMIAGLAIILFIT---LKHNFLQT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
+ LV N+ IG L + Y P E +LL +IG I++ +
Sbjct: 121 TNLVPLEINIHTIGNALLSSDKYGYILPFEAISILLLACIIGGIMIARKR 170
>gi|192293782|ref|YP_001994421.1| NADH dehydrogenase subunit 6 [Acanella eburnea]
gi|148964837|gb|ABR19859.1| NADH dehydrogenase subunit 6 [Acanella eburnea]
Length = 183
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 88/165 (53%), Gaps = 7/165 (4%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 64 AILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIG 116
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
N+ IG LYT Y + ++ +LL +M+GAI+L +
Sbjct: 117 SRTNIXAIGSHLYTTYYELVLVASLVLLXAMVGAILLAKQPNTPS 161
>gi|133900498|gb|ABO41415.1| NADH dehydrogenase subunit 6 [Marathrum cf. oxycarpum Cachoeirc
9/1996]
Length = 179
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+V +NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM
Sbjct: 1 GLMVARAKNPVHSVLFFILVFCDTSGLLLLLGLDFSAMIFSVVHIGAIAVLFLFVVMMFH 60
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----------MVFSAEGELSRLVFK 127
I I R S IG++ + F + + V
Sbjct: 61 IQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILEFESIPLLPTQKQTAYLKYTVYAGKVRP 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
N+E +G +LYT Y L +S ILL++MIGAIVL + + +KRQD+ ++ +
Sbjct: 121 WTNLETLGNLLYTYYFLWLLLSSLILLVAMIGAIVLTMHRTKKVKRQDLFRRNAIDF 177
>gi|29349470|ref|NP_812973.1| NADH dehydrogenase I subunit J [Bacteroides thetaiotaomicron
VPI-5482]
gi|253570160|ref|ZP_04847569.1| NADH dehydrogenase subunit I [Bacteroides sp. 1_1_6]
gi|29341379|gb|AAO79167.1| NADH dehydrogenase I, chain J [Bacteroides thetaiotaomicron
VPI-5482]
gi|251840541|gb|EES68623.1| NADH dehydrogenase subunit I [Bacteroides sp. 1_1_6]
Length = 170
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + I S + VT + + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAAFIIAMSIMTVTTQRIVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + AE K+ FL F + +I+ + + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRAEKLKRSRFLAGLFTMVAGLAIILFIT---LKHNFLQT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
+ LV N+ IG L + Y P E +LL +IG I++ +
Sbjct: 121 TNLVPLEINIHTIGNALLSSDKYGYILPFEAISILLLACIIGGIMIARKR 170
>gi|108761433|ref|YP_629344.1| NADH dehydrogenase I subunit J [Myxococcus xanthus DK 1622]
gi|108465313|gb|ABF90498.1| NADH dehydrogenase I, J subunit [Myxococcus xanthus DK 1622]
Length = 168
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 86/167 (51%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ + F F+ + ++S+ V+ R+PI S +L+ F AG+++LL A VA++ ++
Sbjct: 1 MNIELILFGAFALLTLLSAGTVIFARSPINSAMALVSTFFFMAGIYVLLWAHTVAVMQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA++V FLF+IM+L++ + + + ++ +
Sbjct: 61 VYAGAIMVLFLFVIMLLNLGESPTRGKPTVARVAGGAATVGLFAVLAIILLKLPAEPATL 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+V++TQ+ +P E +LL++M+GA+V+
Sbjct: 121 STGAQASFGTIATMGQVIFTQWLFPFEAVSLLLLVAMVGAVVVAKSR 167
>gi|153007184|ref|YP_001381509.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter sp. Fw109-5]
gi|152030757|gb|ABS28525.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter sp. Fw109-5]
Length = 170
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 96/166 (57%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F++F+ ++++ VV RNP+Y+ +L+ AF AG+++LL A +A++ ++V
Sbjct: 4 TAELVIFWIFAIPLLLTAMGVVVARNPVYAAMNLVAAFFFMAGIYVLLAAHLIALMQILV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+V FLF+IM+L E E ++R IG ++ ++ A+ V +
Sbjct: 64 YAGAVMVLFLFVIMLLSTGEEHRERERRRVMQYVGAIGAVSLFAVLVAAIARVPDSAMGA 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ V+ +G+VLYT+Y P E++ +LL++++GA+V+
Sbjct: 124 LAQPDRFGTVKAVGQVLYTEYLLPFEVTSLLLLVAIVGAVVVAKEK 169
>gi|15606522|ref|NP_213902.1| NADH dehydrogenase I chain J [Aquifex aeolicus VF5]
gi|2983740|gb|AAC07301.1| NADH dehydrogenase I chain J [Aquifex aeolicus VF5]
Length = 162
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ L F++ IIS+ V +NPI+ + + + + AGLFL LGAE +A + L++Y
Sbjct: 1 MEWLIFFILGAWLIISALGTVLAKNPIHVMLFFLSSLLAMAGLFLSLGAELLAGLQLIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
A++VF++ I + + R + + ++ ++MV +
Sbjct: 61 AVAIVVFYVLAITTIPWEKI---KRFEGVYKTEILTASPILLVLFLVMSYMVIKGKFAEP 117
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V K N VE +G+ L+T Y +P E++ ILL++M+GAI+L +
Sbjct: 118 SGVVKDN-VEAVGRTLFTSYLFPFEVASVILLVAMVGAILLARKE 161
>gi|330339526|ref|YP_004376727.1| NADH dehydrogenase subunit 6 [Paracorallium japonicum]
gi|328750567|dbj|BAK18829.1| NADH dehydrogenase subunit 6 [Paracorallium japonicum]
Length = 184
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 95/186 (51%), Gaps = 16/186 (8%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + S + +SF+V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFIIISLGIVGASFMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 64 AILFLFVIMLIQQPNKVYYQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIG 116
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK---------RQDIS 177
N+ IG LYT Y + ++ +LL++M+GAI+L + RQD+
Sbjct: 117 SRTNIGAIGSHLYTTYYELVLVASLVLLVAMVGAILLAKQPNTPSLYDSHVEIRSRQDLF 176
Query: 178 KQLESN 183
Q+
Sbjct: 177 LQISRK 182
>gi|291303391|ref|YP_003514669.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Stackebrandtia nassauensis DSM 44728]
gi|290572611|gb|ADD45576.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Stackebrandtia nassauensis DSM 44728]
Length = 173
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F + + ++ VVT + + + L+ A A FL+L AE VA + ++
Sbjct: 1 MTVTDVLLVAFGLLTLGAAVRVVTTAHLVRAGLWLVVALGGLAACFLVLTAELVAWVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGAV+V LF +M+ I + + + G+ L V ++
Sbjct: 61 IYVGAVVVLLLFAVMLTRAPIGASPEMDRARWPGAIVGAAAGLGLSVLLADAF---RWTS 117
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G ++ + P E+ +LL +++GAI++ + +RD
Sbjct: 118 IDAQAVEPGTAKRLGTEIFGNWVLPFELLSVLLLAALVGAILVSAKQKRD 167
>gi|296936724|gb|ADH94396.1| NADH-plastoquinone oxidoreductase subunit 6 [Syzygium cumini]
Length = 176
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ S VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGSLGVVLLINPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ + LF +M ++ + G IL + +
Sbjct: 67 VGAINILILFAVMFMNGSEYYKDLNLWTVGDGITSLVCTSILVSLMTTILDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQIIEQDLIGNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|262373367|ref|ZP_06066646.1| NADH:ubiquinone oxidoreductase subunit 6 [Acinetobacter junii
SH205]
gi|262313392|gb|EEY94477.1| NADH:ubiquinone oxidoreductase subunit 6 [Acinetobacter junii
SH205]
Length = 173
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 92/161 (57%), Gaps = 1/161 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AI+S+ VVT NP++++ SLI + + AG+F+++GA F A + ++VY GA++
Sbjct: 5 FYLMALVAIVSTVRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAAALEIIVYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV-F 126
V F+F++MML++ E E K ++ + + ++ +M+ +S +
Sbjct: 65 VLFVFVVMMLNLGQETVEQESKWLTSDAWAYPAMLSFILGLTLVWMLNGEYTTISAPMGL 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L+T Y +E++ +LL +++ A L R
Sbjct: 125 EIVGPKAVGQALFTHYLLLVEVAAMLLLAALVAAYHLGKRE 165
>gi|325121089|gb|ADY80612.1| NADH dehydrogenase I chain J [Acinetobacter calcoaceticus PHEA-2]
Length = 172
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AI+S+ VVT NP++++ SLI + + AG+F+++GA F + ++VY GA++
Sbjct: 4 FYLMALVAIVSTVRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 63
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSF-FIGILAAELIVCASNFMVFSAEGELSRLVF 126
V F+F++MML++ E +K ++ + +++ L + + + L
Sbjct: 64 VLFVFVVMMLNLGQHTVEQERKWLSSDAWAYPALMSFLLGLLLVWMLGGEYTTISAPLGA 123
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L+T Y +E++ +LL +++ A L R
Sbjct: 124 QVIGPKVVGQALFTHYLLLVEVAAMLLLAALVAAYHLGKRE 164
>gi|313183874|ref|YP_004021717.1| NADH-plastoquinone oxidoreductase subunit 6 [Prunus persica]
gi|309321486|gb|ADO65027.1| NADH-plastoquinone oxidoreductase subunit 6 [Prunus persica]
Length = 176
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV NPIYS FSL V + ++LL + FVA L++Y
Sbjct: 7 IHDFLLVFLGSVLILGGMGVVLFTNPIYSAFSLGLVLVCISLFYILLNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS---FFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I +I
Sbjct: 67 VGAINVLIVFAVMFMNGSEYYKDLNLWTVGDGVTLPVCTSIFVLLMITITDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E ILL ++IGAI +
Sbjct: 127 TRSNQIIEQDLISNSQQIGIHLSTDFFLPFEFVSIILLAALIGAIAVAR 175
>gi|197131420|gb|ACH47228.1| NADH-plastoquinone oxidoreductase subunit 6 [Pelargonium
cotyledonis]
Length = 176
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ S VV + NPIYS FSL F F+ + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGSLGVVLLTNPIYSAFSLGFVFICISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ E G + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKESPLWTVGDGLTSLISTILFFSLITTILNTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +N + +G L T + P E+ ILL++++GAI +
Sbjct: 127 TRSNQIIEKDLISNSQQLGIHLSTDFFLPFELISIILLVALLGAISVAR 175
>gi|325610517|gb|ADZ36464.1| NADH dehydrogenase subunit 6 [Gordonia lasianthus]
Length = 176
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ F+ I++S V+ NPIYS FSL FV + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGFVLILASLGVILFPNPIYSAFSLGLVFVCISFFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGITSMVCTSIFVSLITTILDTSWYGIIWA 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|212640512|ref|YP_002317032.1| NADH dehydrogenase subunit J [Anoxybacillus flavithermus WK1]
gi|212561992|gb|ACJ35047.1| NADH dehydrogenase subunit J [Anoxybacillus flavithermus WK1]
Length = 169
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + F++ S +A+ ++ + ++ V +L+F FV+ AG+++LL AEFVA + ++
Sbjct: 1 MSGQYIAFFVLSLIALGGGIFMLNLNKVVHMVVALVFTFVSIAGIYVLLSAEFVAAVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA+ + LF IM+ + + + ++ + F +E
Sbjct: 61 IYSGAITIIMLFGIMLTRHQDDGQSTGSPLRKALALLGTVAFGAVMYIGIRTLDFGSE-- 118
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ N E IG +Y++Y P E++ +LL+++IGA++L + ++
Sbjct: 119 --AVGLHDKNTEQIGIAMYSKYVIPFELASVLLLVALIGAVILAKKDDKE 166
>gi|229158854|ref|ZP_04286912.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus ATCC
4342]
gi|228624838|gb|EEK81607.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus ATCC
4342]
Length = 162
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
AII L++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F I
Sbjct: 3 AIIGGVLMLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGI 62
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
M+ + E R FF + ++ A N + F+ E L N I
Sbjct: 63 MLTKHNA-GNESRLTLRKWIIFFAVVAFGAVMYFAVNNIDFANESTQGSLPLHEKNTLQI 121
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
G +LY++Y P E+ ILL++++GAI+L + ++
Sbjct: 122 GTLLYSKYIIPFELISVILLVALVGAIILAKKDEKE 157
>gi|156598197|gb|ABU85362.1| NADH-plastoquinone oxidoreductase subunit 6 [Elaeis oleifera]
Length = 176
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + F + I+ VV + NPI+S FSL V + ++L + FVA L++Y
Sbjct: 7 IHDILVVFFGSVLILGGLGVVLLTNPIFSAFSLGLVLVCISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G IL + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYSNDSYFWTIGDGVTSLVCTSILFSLITIIPDTSWYGIFWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +N++ IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TRSSQIMEQDLISNIQQIGIHLSTDFYLPFELISIILLVSLIGAITMAR 175
>gi|56791568|gb|AAW30322.1| NADH dehydrogenase subunit 6 [Asarum sp. Qiu 96018]
Length = 166
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 54/166 (32%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL LLLG +F AMI+ VV++GA+
Sbjct: 1 VLSSPALVSGLMVVRAKNPVHSVSFPIPVFRDTSGLLLLLGLDFSAMISPVVHIGAIAAS 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM +I I R S IG++ +
Sbjct: 61 FLFVVMMFNIQIAETHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTHRNTTSLRY 120
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ V N E +G +LYT Y + ILL++MIGAIVL
Sbjct: 121 KVHAGKVRSWTNFETLGNLLYTYYVVWFLVPSPILLVAMIGAIVLT 166
>gi|160886843|ref|ZP_02067846.1| hypothetical protein BACOVA_04857 [Bacteroides ovatus ATCC 8483]
gi|299148401|ref|ZP_07041463.1| NADH dehydrogenase I, subunit 6 [Bacteroides sp. 3_1_23]
gi|156107254|gb|EDO08999.1| hypothetical protein BACOVA_04857 [Bacteroides ovatus ATCC 8483]
gi|298513162|gb|EFI37049.1| NADH dehydrogenase I, subunit 6 [Bacteroides sp. 3_1_23]
Length = 170
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 74/170 (43%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + I S + VT + + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAAFIIAMSIMTVTTQRIVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + AE K+ L I + + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRAEKAKRSKLLAGL---ITMIAGLAIILTITLKHNFMQT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
+ L N+ IG L + Y P E +LL +IG I++ +
Sbjct: 121 ANLAPHEINIHAIGNALLSSDKYGYILPFEAVSILLLACIIGGIIIARKR 170
>gi|260171807|ref|ZP_05758219.1| NADH dehydrogenase I, chain J [Bacteroides sp. D2]
gi|315920119|ref|ZP_07916359.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313693994|gb|EFS30829.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 170
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + I S + VT + + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAAFIIAMSIMTVTTQRIVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + AE K+ L I + + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRAEKVKRSKLLAGL---ITMIAGLAIILTITLKHNFMQT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
+ L + ++ IG L + Y P E +LL +IG I++ +
Sbjct: 121 ANLAPQEIDIHAIGNALLSSDKYGYILPFEAVSILLLACIIGGIIIARKR 170
>gi|288819088|ref|YP_003433436.1| NADH dehydrogenase I chain J [Hydrogenobacter thermophilus TK-6]
gi|288788488|dbj|BAI70235.1| NADH dehydrogenase I chain J [Hydrogenobacter thermophilus TK-6]
gi|308752671|gb|ADO46154.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Hydrogenobacter thermophilus TK-6]
Length = 163
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 89/165 (53%), Gaps = 3/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + L S ++S+ + ++NP++ + + + + AG+FL + AE +A + L++Y
Sbjct: 1 MEWVITALLSLWLVLSALCTIFMKNPVHVILAFLSVILAMAGIFLQMKAELLAGLQLIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
A++VF++ +I ++ + R + + F G + ++MV +
Sbjct: 61 AVAIVVFYVLVITVIPWEKV---KRFEGIYKQELFWGAPFFLISFLLMSYMVLKGKFAQP 117
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V G+NV ++GK L+T Y +P E++ ILL++MIGAI+L +
Sbjct: 118 LNVISGDNVRDVGKNLFTSYLFPFEVASVILLVAMIGAILLGRKE 162
>gi|153799806|gb|ABS50634.1| NADH dehydrogenase subunit 6 [Arabidopsis thaliana]
gi|153799808|gb|ABS50635.1| NADH dehydrogenase subunit 6 [Arabidopsis thaliana]
Length = 171
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 11/170 (6%)
Query: 30 YSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKK 89
+SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM I I
Sbjct: 1 HSVLFPIPVFRDTSGLLLLLGLDFFAMIFPVVHIGAIAVSFLFVVMMFHIQIAEIHEEVL 60
Query: 90 RGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFKGNNVENIGKVL 138
R S IG++ + + V N+E +G +L
Sbjct: 61 RYLPVSGIIGLIFWWEMFFILDNESIPLLPTQRNTTSLRYTVYAGKVRSWTNLETLGNLL 120
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSI 188
YT Y+ + ILL++MIGAIVL + +KRQD+ ++ + +I
Sbjct: 121 YTYYSVWFLVPSLILLVAMIGAIVLTMHRTTKVKRQDVFRRNAIDFRRTI 170
>gi|290489874|gb|ADD31344.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Heuchera
sanguinea]
Length = 176
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++ + FVA L++Y
Sbjct: 7 IHDFLLVFLGSALILGGLGVVLLTNPIYSAFSLGLVLVCISLFYISSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSGSYKDFTLWTVGDGVTSVVCTSIFVSLITIIPDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAITVAR 175
>gi|215484511|ref|YP_002326746.1| NADH-quinone oxidoreductase subunit J [Acinetobacter baumannii
AB307-0294]
gi|213988115|gb|ACJ58414.1| NADH-quinone oxidoreductase subunit J [Acinetobacter baumannii
AB307-0294]
Length = 172
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AI+S+ VVT NP++++ SLI + + AG+F+++GA F + ++VY GA++
Sbjct: 4 FYLMALVAIVSTVRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 63
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSF-FIGILAAELIVCASNFMVFSAEGELSRLVF 126
V F+F++MML++ E +K ++ + +++ L + + + L
Sbjct: 64 VLFVFVVMMLNLGQHTVEQERKWLSSDAWAYPALMSFLLGLLLVWMLGGEYTTISAPLGA 123
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L+T Y +E++ +LL +++ A L R
Sbjct: 124 RVIGPKVVGQALFTHYLLLVEVAAMLLLAALVAAYHLGKRE 164
>gi|169634173|ref|YP_001707909.1| NADH dehydrogenase I chain J [Acinetobacter baumannii SDF]
gi|184157037|ref|YP_001845376.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Acinetobacter
baumannii ACICU]
gi|239501286|ref|ZP_04660596.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Acinetobacter
baumannii AB900]
gi|260551025|ref|ZP_05825230.1| NADH:ubiquinone oxidoreductase subunit 6 [Acinetobacter sp.
RUH2624]
gi|260555658|ref|ZP_05827878.1| NADH:ubiquinone oxidoreductase subunit 6 [Acinetobacter baumannii
ATCC 19606]
gi|262280138|ref|ZP_06057923.1| NADH:ubiquinone oxidoreductase subunit 6 [Acinetobacter
calcoaceticus RUH2202]
gi|299771411|ref|YP_003733437.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Acinetobacter
sp. DR1]
gi|332872612|ref|ZP_08440580.1| NADH-quinone oxidoreductase subunit J [Acinetobacter baumannii
6014059]
gi|169152965|emb|CAP02011.1| NADH dehydrogenase I chain J [Acinetobacter baumannii]
gi|183208631|gb|ACC56029.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Acinetobacter
baumannii ACICU]
gi|193076542|gb|ABO11200.2| NADH dehydrogenase I chain J [Acinetobacter baumannii ATCC 17978]
gi|260405973|gb|EEW99460.1| NADH:ubiquinone oxidoreductase subunit 6 [Acinetobacter sp.
RUH2624]
gi|260410569|gb|EEX03867.1| NADH:ubiquinone oxidoreductase subunit 6 [Acinetobacter baumannii
ATCC 19606]
gi|262260489|gb|EEY79222.1| NADH:ubiquinone oxidoreductase subunit 6 [Acinetobacter
calcoaceticus RUH2202]
gi|298701499|gb|ADI92064.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Acinetobacter
sp. DR1]
gi|332739141|gb|EGJ70000.1| NADH-quinone oxidoreductase subunit J [Acinetobacter baumannii
6014059]
Length = 173
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AI+S+ VVT NP++++ SLI + + AG+F+++GA F + ++VY GA++
Sbjct: 5 FYLMALVAIVSTVRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSF-FIGILAAELIVCASNFMVFSAEGELSRLVF 126
V F+F++MML++ E +K ++ + +++ L + + + L
Sbjct: 65 VLFVFVVMMLNLGQHTVEQERKWLSSDAWAYPALMSFLLGLLLVWMLGGEYTTISAPLGA 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L+T Y +E++ +LL +++ A L R
Sbjct: 125 QVIGPKVVGQALFTHYLLLVEVAAMLLLAALVAAYHLGKRE 165
>gi|95928464|ref|ZP_01311212.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Desulfuromonas acetoxidans DSM 684]
gi|95135735|gb|EAT17386.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Desulfuromonas acetoxidans DSM 684]
Length = 174
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ FY F + + F+ V R +++V L + AGL+ LG+ F+AM+ +++Y
Sbjct: 7 IAEALFYAFMILTFMGGFMAVRSRMLMHAVLGLAVSLFGVAGLYFHLGSPFLAMMQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV + + +M+ + +++ + + + + A + + +
Sbjct: 67 VGAVCIMIVLGVMLGNTPDQLSSDKLS---RRNMLLALGACSTGFVTLFIAIQQTKFAPA 123
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ IG+ L +Y E+ ILL ++IGAI+L R ++ +
Sbjct: 124 AEKIGDMSIRFIGENLLFKYCLAFELISVILLTAIIGAIILARGGREEVAK 174
>gi|50083957|ref|YP_045467.1| NADH dehydrogenase I chain J [Acinetobacter sp. ADP1]
gi|49529933|emb|CAG67645.1| NADH dehydrogenase I chain J [Acinetobacter sp. ADP1]
Length = 173
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 94/169 (55%), Gaps = 1/169 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AIIS+ VVT NP++++ SLI + + AG+F+++GA F + ++VY GA++
Sbjct: 5 FYLMALVAIISTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF- 126
V F+F++MML++ E +K ++ + L + L+ +M+ ++
Sbjct: 65 VLFVFVVMMLNLGRHTVEQERKWLTSETWAVPALMSFLLGLTLVWMLSGEYTTAGHVLGR 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ + +G+ L+T Y +EI+ +LL +++ A L R + Q+
Sbjct: 125 EVIGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKREPSATEGQE 173
>gi|183220693|ref|YP_001838689.1| NADH-quinone oxidoreductase subunit J [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
gi|189910794|ref|YP_001962349.1| NADH dehydrogenase subunit J [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775470|gb|ABZ93771.1| NADH dehydrogenase (ubiquinone), J chain [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167779115|gb|ABZ97413.1| NADH-quinone oxidoreductase, chain J [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Paris)']
Length = 199
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 16/179 (8%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L F F + ++++ VV +NP+ S SL+F F AG++ ++GA F+A + ++VY G
Sbjct: 9 LLLFVFFGTVTVVTALSVVFQKNPVVSAVSLVFTFFALAGIYGIMGALFIATMQVLVYAG 68
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV---------- 114
A++V +F++M+L E +K + + S
Sbjct: 69 AIMVLVVFVLMLLSQRAETLSRYRKHPIRLVLLSVFVLGFFFLLYSALTTGVPHSEQMGK 128
Query: 115 ------FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
++ + + V NV +G Y Y P E+ +LL++++GA++L +
Sbjct: 129 GYENAEYNFPIQGTSTVNAKGNVATVGASTYLDYLLPFEMISILLLVAVLGAVILAKKK 187
>gi|226953544|ref|ZP_03824008.1| NADH dehydrogenase I subunit J [Acinetobacter sp. ATCC 27244]
gi|226835722|gb|EEH68105.1| NADH dehydrogenase I subunit J [Acinetobacter sp. ATCC 27244]
Length = 173
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AI+S+ VVT NP++++ SLI + + AG+F+++GA F + ++VY GA++
Sbjct: 5 FYLMALVAIVSTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF- 126
V F+F++MML++ + E K ++ L + L+ +M+ S ++
Sbjct: 65 VLFVFVVMMLNLGQDTVEQESKWLTSDAWAFPALMSFLMGLILVWMLGSDYTTTGAVMGR 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L+T Y +EI+ +LL +++ A L R
Sbjct: 125 EVVGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKRE 165
>gi|219674001|ref|YP_002456485.1| NADH-plastoquinone oxidoreductase subunit 6 [Trifolium
subterraneum]
gi|193788970|gb|ACF20566.1| NADH-plastoquinone oxidoreductase subunit 6 [Trifolium
subterraneum]
Length = 176
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 6/170 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ I+ S VV + NPI+S FSL V + L++L + FVA L++
Sbjct: 6 TLHDFLLVFLGSGLILGSLGVVLLTNPIFSAFSLGLVLVCISLLYILANSHFVAASQLLI 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ + +F +M ++ + G I + + +
Sbjct: 66 YVGAINILIIFAVMFVNSCEYYQDFHFWTVGDGITLIVCTSIFVSLITIIPDTSWYGIIW 125
Query: 122 SRLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + IG L T + P E+ ILL+++IGAIV+
Sbjct: 126 TTRPNQIIEQDLISTSQQIGIHLSTDFFLPFELISIILLVALIGAIVVAR 175
>gi|301165397|emb|CBW24968.1| putative NADH dehydrogenase chain J [Bacteriovorax marinus SJ]
Length = 174
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ ++ F L + + + ++ VV RN +++ L+ + AGL+ LGA+F+A +VV
Sbjct: 1 MFINIMFILSALLTLAGAYGVVASRNIMHACVYLLASLFGIAGLYATLGADFLAATQMVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPR-----KKRGFLGSFFIGILAAELIV-CASNFMVF 115
Y G V++ LF IM+ E G + +F IG L+A ++ A +
Sbjct: 61 YAGGVVILMLFAIMLTGGHKEAMNRFGINKIPSMGTVRTFVIGTLSALVLGSVAFKIIAG 120
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ L VE +G +L T + EIS +LL +++GA V+ ++
Sbjct: 121 MTKHVPGELPEFTTTVEKLGVLLLTDHILAFEISSVLLLGALVGAAVISRPRKQ 174
>gi|301058577|ref|ZP_07199582.1| putative NADH-quinone oxidoreductase subunit J [delta
proteobacterium NaphS2]
gi|300447309|gb|EFK11069.1| putative NADH-quinone oxidoreductase subunit J [delta
proteobacterium NaphS2]
Length = 166
Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 3/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+L FY+ +A++++FL +T R I+ + L+ + + AA FL+LGA F A + ++ Y G
Sbjct: 2 NLAFYVSGVIAVLATFLAITRREAIHGLVYLVVSLLAAAVAFLVLGAPFAAALEVITYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V LF +M L + K+ ++ +F+ G+ S +
Sbjct: 62 AMMVMLLFAVMTLSPKARKEDDAKRPHPWFWL---GPLLLSVLLTGDFIYVLFAGKGSPV 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G+VL+ Y +E++ +LL ++GA L +
Sbjct: 119 SGSAVSPRQVGQVLFGPYVLGVELASMLLLAGLVGAYHLGRNGSQG 164
>gi|330339541|ref|YP_004376741.1| NADH dehydrogenase subunit 6 [Corallium konojoi]
gi|328750582|dbj|BAK18843.1| NADH dehydrogenase subunit 6 [Corallium konojoi]
Length = 184
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 16/186 (8%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + S + +SF+V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFIMISLGIVGASFMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 64 AILFLFVIMLIQQPNKVDYQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIG 116
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR---------HRRDIKRQDIS 177
N+ IG LYT Y + ++ +LL++M+GAI+L + H RQD+
Sbjct: 117 SRTNIGAIGSHLYTTYYELVLVASLVLLVAMVGAILLAKQPSTPSLYDSHVETRSRQDLF 176
Query: 178 KQLESN 183
Q+
Sbjct: 177 LQISRK 182
>gi|294649468|ref|ZP_06726892.1| NADH-quinone oxidoreductase subunit J [Acinetobacter haemolyticus
ATCC 19194]
gi|292824638|gb|EFF83417.1| NADH-quinone oxidoreductase subunit J [Acinetobacter haemolyticus
ATCC 19194]
Length = 173
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AI+S+ VVT NP++++ SLI + + AG+F+++GA F + ++VY GA++
Sbjct: 5 FYLMALVAIVSTIRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF- 126
V F+F++MML++ + E K ++ L + L+ +M+ S ++
Sbjct: 65 VLFVFVVMMLNLGQDTVEQESKWLTSDAWAFPALMSFLMGLILVWMLGSDYTTSGAVMGR 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L+T Y +EI+ +LL +++ A L R
Sbjct: 125 EVVGPKAVGQALFTHYLLLVEIAAMLLLAALVAAFHLGKRE 165
>gi|32267093|ref|NP_861125.1| NADH dehydrogenase subunit J [Helicobacter hepaticus ATCC 51449]
gi|32263145|gb|AAP78191.1| donor-ubiquinone reductase I [Helicobacter hepaticus ATCC 51449]
Length = 173
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 93/173 (53%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FYLFS + I+S +VVT + +Y++ +L + +G+F +L AEF+ ++ ++V
Sbjct: 1 MFETIAFYLFSTLCIVSFLIVVTSKRILYAMTALASGMIFISGIFFVLDAEFLGVVQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G+V+ + F +M D ++ E K + GI + + + + E
Sbjct: 61 YSGSVVALYAFAMMFFDTSKDIIESYKNEWVVCILCFGIAVVLVCIFGMPLLGSNLEAVA 120
Query: 122 SR----LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + NN++ IG +++T+Y P EI+ F+LL++M+ I+L ++
Sbjct: 121 DSQNLLNIAEMNNIQMIGYIIFTKYLIPFEIAAFMLLVAMVVGIILSIKRSEQ 173
>gi|218129265|ref|ZP_03458069.1| hypothetical protein BACEGG_00842 [Bacteroides eggerthii DSM 20697]
gi|317475237|ref|ZP_07934504.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
eggerthii 1_2_48FAA]
gi|217988643|gb|EEC54963.1| hypothetical protein BACEGG_00842 [Bacteroides eggerthii DSM 20697]
gi|316908690|gb|EFV30377.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
eggerthii 1_2_48FAA]
Length = 170
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 80/170 (47%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + + S L VT R + S L+F AG++ LLG F+ + ++V
Sbjct: 4 NLETIVFYFLAAFITVFSILTVTTRRMVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + ++A K+ FL I A ++V + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDIAGKLKRSKFLAGLGATIGGAIIVVFIT---LKHKFIAT 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +V N++ IG + + Y P E +LL ++G +++ +
Sbjct: 121 TDVVPLEVNIKTIGHHMLSGDKYGYLLPFEAVSILLLACIVGGLLIARKR 170
>gi|139389697|ref|YP_001123253.1| NADH dehydrogenase ND6 [Arabis hirsuta]
gi|221272309|sp|A4QK73|NU6C_ARAHI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134286452|dbj|BAF50078.1| NADH dehydrogenase ND6 [Arabis hirsuta]
Length = 176
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLIVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILANSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + + ++ +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYFTDFNLWTVGDGITSLVCTTLLFSLISTILDTSWYGVIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRLNQILEQDLISNSQQIGSHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|189500533|ref|YP_001960003.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chlorobium
phaeobacteroides BS1]
gi|189495974|gb|ACE04522.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Chlorobium
phaeobacteroides BS1]
Length = 174
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ FYLF+ + + S+ VV RN IYS FSL+F F A L++ L A+F+A+ ++V
Sbjct: 4 TTYTVIFYLFAAVTVFSAAFVVFSRNIIYSAFSLLFTFFGVAALYVFLSADFIAVTQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVG ++V LF +M + + K L +L + V AE
Sbjct: 64 YVGGILVLLLFGVMFTNK---IMMTDLKTDVLNILPGIVLLLSITGGLIYTFVARAEWFT 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGF 151
S + +G+ VE IG ++Y P E+
Sbjct: 121 STVQLQGSVVEKIGFETMSRYVLPFEMVSI 150
>gi|326799009|ref|YP_004316828.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Sphingobacterium sp. 21]
gi|326549773|gb|ADZ78158.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Sphingobacterium sp. 21]
Length = 165
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 91/165 (55%), Gaps = 2/165 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY +F++I S +V+ +NP++SV L+ F ++LL A+F+A++ +VY+GA+
Sbjct: 3 LFYFVAFLSIFFSLMVIITKNPVHSVLYLVITFFTFTVHYILLNAQFLAVVNFIVYMGAI 62
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V FLF++M+L+++ + + + G+ L+ A + L
Sbjct: 63 MVLFLFVLMLLNLNKDTEPMKSVLVKVMGAVAGMC--LLVTVAGSIRAIEVSDPLILKSP 120
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
V N+GKVL+ ++ P EIS +LL +M+GA++L + ++ I
Sbjct: 121 DIGLVGNLGKVLFNEFLLPFEISSLLLLTAMVGAVLLAKKEQKSI 165
>gi|224538207|ref|ZP_03678746.1| hypothetical protein BACCELL_03098 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520175|gb|EEF89280.1| hypothetical protein BACCELL_03098 [Bacteroides cellulosilyticus
DSM 14838]
Length = 170
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + + S L VT R+ + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAVFISVCSILTVTTRHMVRSATYLLFTLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + K+ L + A ++V + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRTTKLKRSKLLAGLGATVGGAIIVVFIT---LKHKFLVT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
+ LV N++ IG + + Y P E +LL ++G +V+ +
Sbjct: 121 TDLVPLEINIKTIGHSMLSSDKFGYLLPFEAVSILLLACIVGGLVIARKR 170
>gi|156598041|gb|ABU85286.1| NADH-plastoquinone oxidoreductase subunit 6 [Cycas micronesica]
Length = 180
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 6/171 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV + N IYS SL V + L++LL A+FVA +++Y
Sbjct: 7 IHDILLVPLELGLILGGLEVVLLTNIIYSALSLGPVLVCISLLYILLNADFVAAAQILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V +F +M+++ G + + + +E ++
Sbjct: 67 VGAVNVLIVFAVMLMNNQKYPNFVPLWTVGDGITLVVCTSLFCSLITIILNTSWSEISMT 126
Query: 123 RLVFKG------NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ NNV+ IG L T + P E+ ILL++++GAI + R
Sbjct: 127 TKSNQILEQDLTNNVQRIGAHLSTDFFLPFELLSIILLVALVGAITIARRE 177
>gi|329957593|ref|ZP_08298068.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
clarus YIT 12056]
gi|328522470|gb|EGF49579.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
clarus YIT 12056]
Length = 170
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + + S L VT + + S L+F AG++ LLG F+ + ++V
Sbjct: 4 NLETIVFYFLAAFITVFSILTVTTKRMVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + ++A K+ FL + A +++ + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDMAGKLKRSKFLAGLGTTVAGAVIVLFIT---LKHKFIAT 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + N++ IG + + Y P E +LL ++G +++ +
Sbjct: 121 TDVAPLEVNIKTIGHHMLSGDKYGYLLPFEAVSILLLACIVGGLLIARKR 170
>gi|194336916|ref|YP_002018710.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309393|gb|ACF44093.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pelodictyon
phaeoclathratiforme BU-1]
Length = 170
Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ FYLF+ + + S+ VV RN IYS FSL+F F A L++ L A+F+A+ +VVYVG
Sbjct: 7 TVIFYLFAAITLFSAAFVVFTRNVIYSAFSLLFTFFGVAALYVFLSADFIAVTQVVVYVG 66
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V LF +M + + V + + +L A ++ + S
Sbjct: 67 GILVLLLFGVMFTNSIMHVGQKSEVLHI---IPGTLLLAAIVGGLLYTFYTTHGWMPSET 123
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGF 151
+ +G+ VE IG ++Y P E+
Sbjct: 124 MLQGSIVERIGFETMSRYVLPFEMVSI 150
>gi|281424347|ref|ZP_06255260.1| NADH dehydrogenase I, subunit 6 [Prevotella oris F0302]
gi|281401616|gb|EFB32447.1| NADH dehydrogenase I, subunit 6 [Prevotella oris F0302]
Length = 173
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 65/170 (38%), Gaps = 4/170 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + + S+ + V + + S L+F AG++ LL F+ + V
Sbjct: 1 MANLVMFCILAVVILGSAIMCVLTKRIMRSATFLLFVLFGVAGIYFLLDYTFLGAAQISV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + + ++F I ++ + +G I + L+ + +
Sbjct: 61 YAGGITMMYIFAIQLVSKRTLQGLVERFKGSRVVNGILLSIVGLVTVGLVLIKNNFYNAA 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +E IG L QY P E LL +IG I++ +
Sbjct: 121 MQATDTEVPMEQIGTALLGSDKYQYVLPFEFISLFLLACIIGGIMIARKE 170
>gi|255007681|ref|ZP_05279807.1| putative NADH dehydrogenase chain J [Bacteroides fragilis 3_1_12]
gi|313145376|ref|ZP_07807569.1| NADH dehydrogenase subunit I [Bacteroides fragilis 3_1_12]
gi|313134143|gb|EFR51503.1| NADH dehydrogenase subunit I [Bacteroides fragilis 3_1_12]
Length = 170
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + I S L VT + + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAVFIIAMSILTVTTQRIVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + A K+ FL I+ A L++ + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRAAHLKRSKFLAGLATTIVGAALVLFIT---LTHKFVPT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
S +++ IG L + Y P E +LL ++G +++ +
Sbjct: 121 SDPEPVEISIKTIGHALLSSGKYGYVLPFEAVSILLLACIVGGLLIARKR 170
>gi|124360819|gb|ABN08791.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Medicago
truncatula]
Length = 176
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 6/170 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ I+ S VV + NPI+S FSL V + L++L + FVA L++
Sbjct: 6 TLHDFLLVFLGSGIILGSLGVVLLTNPIFSAFSLGLVLVCISLLYILSNSHFVAASQLLI 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ + F +M ++ + G I + + +
Sbjct: 66 YVGAINILITFAVMFMNSSEYYQDFNLWTVGDGITLIVCTSIFVSLITIISDTSWYGIIW 125
Query: 122 SRLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + IG L T + P E+ ILL+++IGAIV+
Sbjct: 126 TTRPNQIIEQDLISTSQQIGIHLSTDFFLPFELISIILLVALIGAIVVAR 175
>gi|300770867|ref|ZP_07080744.1| NADH-quinone oxidoreductase subunit J [Sphingobacterium
spiritivorum ATCC 33861]
gi|300762140|gb|EFK58959.1| NADH-quinone oxidoreductase subunit J [Sphingobacterium
spiritivorum ATCC 33861]
Length = 182
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ L FY F+ +AI S+ LVV ++N ++F AGL+L A+FVA+ ++
Sbjct: 1 MTLEELLFYAFAALAIGSALLVVNLKNTARALFLFFIVLFAMAGLYLFALADFVAITQIM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG--SFFIGILAAELIVCASNFMVFSAE 118
VYVG V++ +F M+ + ++ FL ++ IL++ ++ +V
Sbjct: 61 VYVGGVLILMIFAFMLSNKELLKDLQHASGKFLTLPNWQSLILSSAFLIIMITAVVEWQS 120
Query: 119 GELSRLV----------FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ + NN++ +G TQY P E+ G L++++IGA L +
Sbjct: 121 EVPAWIEQARINNTFIRPSDNNIQQLGFKFMTQYILPFELIGIFLMMTLIGAAHLSRKED 180
Query: 169 R 169
+
Sbjct: 181 K 181
>gi|322417690|ref|YP_004196913.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
M18]
gi|320124077|gb|ADW11637.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
M18]
Length = 161
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M++ FY+ + + +I + +T R + ++ L+ +F A +F LLGA +A +++Y
Sbjct: 1 MEATLFYILAAVTLIGTLCAITARQAVRAIVYLVTSFFALALIFYLLGAPLIAAFEVIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF+IMML++ P K S + L V S ++ +
Sbjct: 61 AGAIMVLFLFVIMMLEL----GSPEKLPKPRLSDWWPALLLVGAVVGSVVVLVADGQPAG 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
F + + L+ QY +E+ LL +++GA+ L R
Sbjct: 117 LPGFVEISARQFAQTLFQQYGVAVEVISMQLLFALVGALYLGRRR 161
>gi|150251537|ref|YP_001312269.1| NADH dehydrogenase subunit 6 [Cycas taitungensis]
gi|221272320|sp|A6H5P5|NU6C_CYCTA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|149941587|dbj|BAF65011.1| NADH dehydrogenase subunit 6 [Cycas taitungensis]
Length = 180
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 6/152 (3%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
VV + N IYS SL V + L++LL A+FVA +++YVGAV V +F +M+++
Sbjct: 26 VVLLTNIIYSALSLGPVLVCISLLYILLNADFVAAAQILIYVGAVNVLIVFAVMLMNNQK 85
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG------NNVENIG 135
G + + + +E ++ + NNV+ IG
Sbjct: 86 YPNFVPLWTVGDGITLVVCTSLFCSLITIILNTSWSEISMTTKSNQILEQDLTNNVQRIG 145
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
L T + P E+ ILL++++GAI + R
Sbjct: 146 AHLSTDFFLPFELLSIILLVALVGAITIARRE 177
>gi|156573609|gb|ABU85140.1| NADH-plastoquinone oxidoreductase subunit 6 [Yucca schidigera]
Length = 176
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ +F I+ VV NPIYS FSL V + ++ + FVA L++Y
Sbjct: 7 IHDIFVVFLGSFLILGGLGVVLFTNPIYSAFSLGLVLVCISLFYIPSNSYFVAAPQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F IM ++ + G IL + +
Sbjct: 67 VGAINVLIIFAIMFMNGSEYSNDSYLWTVGDGITSLVCTSILFSLITTILDMSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +NV+ IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TRKNQIIEQDLISNVQQIGIHLSTDFYLPFELISIILLVSLIGAITMAH 175
>gi|41582338|gb|AAS07952.1| NADH-quinone oxidoreductase, J subunit [uncultured marine bacterium
463]
Length = 169
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 87/164 (53%), Gaps = 3/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY+ + +A+ S+ +T N +++ LI + + A +F L+GA F A + +V+Y
Sbjct: 1 MLATLFYIAALIALTSTMAALTRANAAHALIYLIVSLLAVAVMFFLMGAPFAAALEVVIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F+IMML++ + ++ ++F+ A L++ ++ ++G S
Sbjct: 61 AGAIMVLFVFVIMMLNLGDTGEDREREWLAGRNWFVPGAMAALLLIEMLMVLGDSQGVTS 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +G L+ Y +EI+ +LL S++GA L R
Sbjct: 121 GNAVSP---KAVGIRLFGPYLLAVEIASMLLLSSLVGAYHLGRR 161
>gi|330503263|ref|YP_004380132.1| NADH dehydrogenase subunit J [Pseudomonas mendocina NK-01]
gi|328917549|gb|AEB58380.1| NADH dehydrogenase subunit J [Pseudomonas mendocina NK-01]
Length = 169
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 69/143 (48%), Gaps = 1/143 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + +A+ S+ VVT NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYFAAGVAVASTVGVVTNTNPVHALLYLIVSLLAVSMVFFALGAPFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ A+ ++ G ++G ++ V + +
Sbjct: 62 AIMVLFVFVVMMLNLGPAAADQERRWLTPG-IWVGPAILSALLLGQLLYVLLNHVSDAHI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLE 147
+ +G L+ Y +E
Sbjct: 121 GHTTVEAKAVGISLFGPYLLAVE 143
>gi|11467927|ref|NP_057988.1| NADH dehydrogenase subunit 6 [Scenedesmus obliquus]
gi|8099192|gb|AAF72047.1|AF204057_2 NADH dehydrogenase subunit 6 [Scenedesmus obliquus]
gi|7711049|emb|CAB90373.1| NADH dehydrogenase subunit 6 [Scenedesmus obliquus]
Length = 219
Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 105/216 (48%), Gaps = 28/216 (12%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
F L + A++S FL++ +NP++SVF L+ F++ +GL +LLG E+ ++ L+VYVGA+
Sbjct: 5 FALIATGALMSVFLMMRSKNPVHSVFYLVLLFLHCSGLLVLLGLEYFVLLQLLVYVGALA 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV-- 125
+ FLF++M+LDI ++ + + +G+ + A + + + S +
Sbjct: 65 ILFLFVVMLLDIPSTEILRHQRGTYPVAGVLGLCLILSALLAFTQPLVESPFQTSPIPTT 124
Query: 126 ------------------------FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
+ V N+G LY +A L I +LL++M+GA+
Sbjct: 125 STFTGQNSDFVSSSRHYSFWNNYRTATSTVANLGIRLYGVHADLLIIRSLLLLVAMVGAV 184
Query: 162 VLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKSGK 197
L L+ + QD+ +Q + S +V++ K
Sbjct: 185 GLTLKRPVSVPNQDVFRQHYVDFQKS--LVQIPQNK 218
>gi|282877796|ref|ZP_06286609.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
buccalis ATCC 35310]
gi|281300112|gb|EFA92468.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
buccalis ATCC 35310]
Length = 173
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 66/170 (38%), Gaps = 4/170 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + + S+ + V + + + LIF AG++ LLG ++ + +
Sbjct: 1 MANLIMFCILAVVILGSAIMCVLTKRIMRAATFLIFVLFGVAGIYFLLGYTYLGAAQIAI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + + ++F I ++ +G + L + +
Sbjct: 61 YAGGITILYIFAIQLVSKRTLQGLVEHLKGSRVIQGALLSLIGLATVIGVLVKNQFIHQA 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+++ + IG+ L QY P E+ LL +IG +++ +
Sbjct: 121 AQVADAEVPMNVIGQALVGSEKYQYVLPFELISVFLLACIIGGLLIARKE 170
>gi|169797050|ref|YP_001714843.1| NADH dehydrogenase I chain J [Acinetobacter baumannii AYE]
gi|213156544|ref|YP_002318205.1| NADH dehydrogenase I chain J [Acinetobacter baumannii AB0057]
gi|301510621|ref|ZP_07235858.1| NADH dehydrogenase I chain J [Acinetobacter baumannii AB058]
gi|301595906|ref|ZP_07240914.1| NADH dehydrogenase I chain J [Acinetobacter baumannii AB059]
gi|332852139|ref|ZP_08433966.1| NADH-quinone oxidoreductase subunit J [Acinetobacter baumannii
6013150]
gi|332867538|ref|ZP_08437691.1| NADH-quinone oxidoreductase subunit J [Acinetobacter baumannii
6013113]
gi|169149977|emb|CAM87871.1| NADH dehydrogenase I chain J [Acinetobacter baumannii AYE]
gi|213055704|gb|ACJ40606.1| NADH dehydrogenase I chain J [Acinetobacter baumannii AB0057]
gi|332729511|gb|EGJ60850.1| NADH-quinone oxidoreductase subunit J [Acinetobacter baumannii
6013150]
gi|332733955|gb|EGJ65100.1| NADH-quinone oxidoreductase subunit J [Acinetobacter baumannii
6013113]
Length = 173
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 90/161 (55%), Gaps = 1/161 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AI+S+ VVT NP++++ SLI + + AG+F+++GA F + ++VY GA++
Sbjct: 5 FYLMALVAIVSTVRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSF-FIGILAAELIVCASNFMVFSAEGELSRLVF 126
V F+F++MML++ E +K ++ + +++ L + + + L
Sbjct: 65 VLFVFVVMMLNLGQHTVEQERKWLSSDAWAYPALMSFLLGLLLVWMLGGEYTTISAPLGA 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L+T Y +E++ +LL +++ A L R
Sbjct: 125 RVIGPKVVGQALFTHYLLLVEVAAMLLLAALVAAYHLGKRE 165
>gi|153012162|ref|YP_001381677.1| NADH-plastoquinone oxidoreductase subunit 6 [Medicago truncatula]
Length = 176
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 6/170 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ I+ S VV + NPI+S FSL V + L++L + FVA L++
Sbjct: 6 TLHDFLLVFLGSGIILGSLGVVLLTNPIFSAFSLGLVLVCISLLYILSNSHFVAASQLLI 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ + +F +M ++ + G I + + +
Sbjct: 66 YVGAINILIIFAVMFMNSSEYYQDFNLWTVGDGITLIVCTSIFVSLITIISDTSWYGIIW 125
Query: 122 SRLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + IG L T + P E+ ILL+++IGAIV+
Sbjct: 126 TTRPNQIIEQDLISTSQQIGIHLSTDFFLPFELISIILLVALIGAIVVAR 175
>gi|322379667|ref|ZP_08053985.1| NADH dehydrogenase subunit J [Helicobacter suis HS5]
gi|321147903|gb|EFX42485.1| NADH dehydrogenase subunit J [Helicobacter suis HS5]
Length = 181
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 88/180 (48%), Gaps = 6/180 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + FY F+ + + + +VV+ N +Y++ +L + V +G F LLGAEF+ ++ ++V
Sbjct: 1 MFEVIAFYFFAILTLSMALIVVSTSNILYAMSALAASMVFISGFFFLLGAEFLGVVQILV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAVIV + F +M + EV E K + +++ + + A
Sbjct: 61 YVGAVIVMYAFGMMFFNASEEVIERSHKPWLVYILGGVFALLLVVILGAPALNNYAHHLS 120
Query: 122 S------RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ NV ++G ++T+Y E G +LL ++IG I LR ++++
Sbjct: 121 AENLQIVTPNLSTTNVHSMGYFVFTKYRIAFEAGGVMLLSALIGGITTALRKSYLSQKEN 180
>gi|227537462|ref|ZP_03967511.1| possible NADH dehydrogenase (quinone) [Sphingobacterium
spiritivorum ATCC 33300]
gi|227242736|gb|EEI92751.1| possible NADH dehydrogenase (quinone) [Sphingobacterium
spiritivorum ATCC 33300]
Length = 182
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 87/181 (48%), Gaps = 12/181 (6%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ L FY F+ +AI S+ LVV ++N ++F AGL+L A+FVA+ ++
Sbjct: 1 MTLEELLFYAFAALAIGSALLVVNLKNTARALFLFFIVLFAMAGLYLFALADFVAITQIM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG--SFFIGILAAELIVCASNFMVFSAE 118
VYVG V++ +F M+ + ++ FL ++ IL++ ++ +V
Sbjct: 61 VYVGGVLILMIFAFMLSNKELLKDLQHASGKFLTLPNWQSLILSSVFLIIMITAVVEWQS 120
Query: 119 GELSR----------LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ + NN++ +G TQY P E+ G L++++IGA L +
Sbjct: 121 EVPAWIEQARINNTLIHPSDNNIQQLGFKFMTQYILPFELIGIFLMMTLIGAAHLSRKED 180
Query: 169 R 169
+
Sbjct: 181 K 181
>gi|254480852|ref|ZP_05094098.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
protein [marine gamma proteobacterium HTCC2148]
gi|214038647|gb|EEB79308.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
protein [marine gamma proteobacterium HTCC2148]
Length = 169
Score = 81.2 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 86/164 (52%), Gaps = 3/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY+ + +A+ S+ +T N +++ LI + + A +F L+GA F A + +V+Y
Sbjct: 1 MLATLFYIAALIALTSTMAALTRANAAHALIYLIVSLLAVAVMFFLMGAPFAAALEVVIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F+IMML++ + ++ ++F+ A L++ ++ +G S
Sbjct: 61 AGAIMVLFVFVIMMLNLGDTGEDREREWLAGRNWFVPGAMAALLLIEMLMVLGDFQGVTS 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +G L+ Y +EI+ +LL S++GA L R
Sbjct: 121 GNAVSP---KAVGIRLFGPYLLAVEIASMLLLSSLVGAYHLGRR 161
>gi|91214192|ref|YP_538815.1| NADH dehydrogenase subunit 6 [Glycine max]
gi|122202478|sp|Q2PMN5|NU6C_SOYBN RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|83595793|gb|ABC25174.1| NADH-plastoquinone oxidoreductase subunit 6 [Glycine max]
Length = 176
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ S VV NPI+S FSL V + ++L + FVA L++Y
Sbjct: 7 LHDFLLVFLGSGLILGSLGVVLFTNPIFSAFSLGLVLVCISLFYILSNSHFVAASQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + R G + + + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYQDFRLWTVGDGITLMVCTSIFVSLITTILDTSWHGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + IG L T + P E+ ILL+++IGAIV+
Sbjct: 127 TRPNQIIEQDLISTSQQIGIHLSTDFFLPFELISIILLVALIGAIVVAR 175
>gi|116009011|gb|ABJ52175.1| NADH dehydrogenase subunit 6 [Phyllostachys edulis]
Length = 173
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + F ++ VV + NPIYS FSL + + ++LL + FVA+ L++Y
Sbjct: 4 IHEILVLFGGFFLLLGGIGVVLLTNPIYSAFSLGLVLICISLFYILLNSYFVAVAQLLIY 63
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M +D GF I IL + +
Sbjct: 64 VGAINVLIIFAVMFIDGSEWSKNKNYWTIGDGFTSLVCITILFSLMTTILDTSWYGILWT 123
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + NNV+ IG L T + P E+ ILL+S+IGAI +
Sbjct: 124 TRSNQIVEQGLINNVQQIGIHLATDFYLPFELISIILLVSLIGAITMAR 172
>gi|332885912|gb|EGK06156.1| hypothetical protein HMPREF9456_00030 [Dysgonomonas mossii DSM
22836]
Length = 167
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + FY+ + + + S+ + VT + I S L+F + AGL+LLL F+ + + V
Sbjct: 1 MAEQIIFYILATIIVFSTIMAVTTQKIIRSATFLLFVLLGTAGLYLLLDYHFLMAVQIAV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G V+V F+F I++ + K S + + + + ++
Sbjct: 61 YGGGVMVLFIFAILLTHEPGVDVKFEKPGRIFISALAALAGLAIC---GHIIFYNVNKFY 117
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + N+++IG + QY P E +LL +IG I++ +
Sbjct: 118 TYITQQELNMQDIGMGMMGTDKYQYLLPFEAISILLLACIIGGIMIARKR 167
>gi|197124711|ref|YP_002136662.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter sp. K]
gi|196174560|gb|ACG75533.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter sp. K]
Length = 168
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F++F+ + ++ V+ R+P+Y+ +L+ AF AG+++LL A +A + ++V
Sbjct: 4 TAEQVTFWVFAIPLVATAIGVIISRSPVYAAMNLVAAFFFLAGIYVLLVAHLIAFMQILV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+V FLF+IM+L + E +R + L+ ++ + + EL
Sbjct: 64 YAGAVMVLFLFVIMLLSLGDEHLIKEPRRAM--QLIGALGVVLLVAVLASAIAQARTSEL 121
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ L V+ +G+VLYTQ+ P E++ +LL++++GA+V+
Sbjct: 122 ATLTADFGTVKAVGRVLYTQFLLPFEVTSLLLLVAIVGAVVVAKER 167
>gi|291515385|emb|CBK64595.1| NADH dehydrogenase subunit J [Alistipes shahii WAL 8301]
Length = 169
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 71/170 (41%), Gaps = 8/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + +S+ L VT R + + L+F AG++ L F+ + L++
Sbjct: 4 TLELIVFTVLALFIGVSAILAVTTRRILRAATYLLFVLFGTAGIYFQLNYSFLGAVQLLI 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + V ++F I++ + AE K + + + + ++ +
Sbjct: 64 YAGGITVLYVFSILLTSSQGDKAEDLKGYKLFVGLGAALASLGICL----WITLRHDFLP 119
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
S +V IG L + Y P E+ +LL ++G I++ +
Sbjct: 120 SHFEHGELHVRTIGHALMSSGKYGYILPFEVISLLLLACIVGGILIARKR 169
>gi|220919432|ref|YP_002494736.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter dehalogenans 2CP-1]
gi|219957286|gb|ACL67670.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 168
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F++F+ + ++ V+ R+P+Y+ +L+ AF AG+++LL A +A + ++V
Sbjct: 4 TAEQVTFWVFAIPLVATAIGVIMSRSPVYAAMNLVAAFFFLAGIYVLLVAHLIAFMQILV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+V FLF+IM+L + E +R + L+ ++ + + EL
Sbjct: 64 YAGAVMVLFLFVIMLLSLGDEHLIKEPRRAM--QLIGALGVVLLVAVLASAIAQARTSEL 121
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ L V+ +G+VLYTQ+ P E++ +LL++++GA+V+
Sbjct: 122 ATLTADFGTVKAVGRVLYTQFLLPFEVTSLLLLVAIVGAVVVAKER 167
>gi|86160614|ref|YP_467399.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85777125|gb|ABC83962.1| NADH dehydrogenase subunit J [Anaeromyxobacter dehalogenans 2CP-C]
Length = 168
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 93/166 (56%), Gaps = 2/166 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F++F+ + ++ V+ R+P+Y+ +L+ AF AG+++LL A +A + ++V
Sbjct: 4 TAEQVTFWVFAIPLVATAIGVIMSRSPVYAAMNLVAAFFFLAGIYVLLVAHLIAFMQILV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+V FLF+IM+L + E +R + L+ ++ + + EL
Sbjct: 64 YAGAVMVLFLFVIMLLSLGDEHLIKEPRRAM--QLIGALGVVLLVAVLASAIAQARTSEL 121
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ L V+ +G+VLYTQ+ P E++ +LL++++GA+V+
Sbjct: 122 ATLAADFGTVKAVGRVLYTQFLLPFEVTSLLLLVAIVGAVVVAKER 167
>gi|317503347|ref|ZP_07961394.1| NADH dehydrogenase subunit J [Prevotella salivae DSM 15606]
gi|315665526|gb|EFV05146.1| NADH dehydrogenase subunit J [Prevotella salivae DSM 15606]
Length = 173
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 66/170 (38%), Gaps = 4/170 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + + S+ + VT + + + L+ AG++ +L F+ + V
Sbjct: 1 MANLIMFCILAVIILGSAIVCVTTKRIMRAATFLLCVLFGVAGIYFILDYTFLGAAQISV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + V ++F+I ++ + +G + + A L+ + +
Sbjct: 61 YAGGITVLYVFVIQLVSKRTLQGLVERFKGKRVFSGVLLCVAGLLTVGLVLIKNNFYNAA 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + IG L QY P E LL +IG I++ +
Sbjct: 121 LQTTDTEVPMAQIGTALLGSDKYQYVLPFEFISVFLLACIIGGIMIARKE 170
>gi|238061175|ref|ZP_04605884.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Micromonospora sp. ATCC 39149]
gi|237882986|gb|EEP71814.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Micromonospora sp. ATCC 39149]
Length = 190
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
MA+ + LVVT R+ + + L+ AGL+L+L AE VA + +++YVGAV+V LF
Sbjct: 1 MAVGAGALVVTTRHLVRAGLYLVVCLGALAGLYLVLTAELVAWVQVLIYVGAVVVLLLFA 60
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVEN 133
+M+ I ++ + G+ + G L + ++ + + E
Sbjct: 61 VMLTRAPIGASDDLDRPGWPAALIGGGTGLGLAALLVDAFRWTRVD-----LPEPGTAER 115
Query: 134 IGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+G+ ++ + P E+ +LL +++GA+VL
Sbjct: 116 LGEQVFRTWVLPFEVLSVLLLAALVGAVVLSR 147
>gi|139390402|ref|YP_001122999.1| NADH dehydrogenase ND6 [Aethionema cordifolium]
gi|221272305|sp|A4QJG9|NU6C_AETCO RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134286195|dbj|BAF49824.1| NADH dehydrogenase ND6 [Aethionema cordifolium]
Length = 176
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + S VV NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLFGSLGVVLFPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEV---AEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ G IL + +
Sbjct: 67 VGAITVLIIFAVMFMNDSEYSTDLNRWTVGDGITSVICTTILFSLISTILDTSWYGVIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|332702764|ref|ZP_08422852.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
africanus str. Walvis Bay]
gi|332552913|gb|EGJ49957.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
africanus str. Walvis Bay]
Length = 168
Score = 80.8 bits (198), Expect = 9e-14, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 3/162 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + + S N + ++ LI AG+++LL A FVA++ ++VYVGAV
Sbjct: 8 AFVFYVLVIAGGSLAAALSHNMVRALLGLILTMFGVAGMYMLLNAPFVALMQVLVYVGAV 67
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
V F IM+ E + ++ L ++ A+ V+ LS +
Sbjct: 68 AVLVFFAIMLTRTPTGGEESQPN---PSRKYLLALLTAMLPGAALGWVWLKHPVLSDVTP 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+E +G+ L Y E+ +L ++M GA++L R R
Sbjct: 125 VQAPMEALGQGLMEPYILAFELISVVLFVAMSGAVILAFRKR 166
>gi|53712157|ref|YP_098149.1| NADH dehydrogenase I chain J [Bacteroides fragilis YCH46]
gi|60680341|ref|YP_210485.1| putative NADH dehydrogenase chain J [Bacteroides fragilis NCTC
9343]
gi|253563805|ref|ZP_04841262.1| NADH dehydrogenase subunit I J [Bacteroides sp. 3_2_5]
gi|265765488|ref|ZP_06093763.1| NADH dehydrogenase subunit I J [Bacteroides sp. 2_1_16]
gi|52215022|dbj|BAD47615.1| NADH dehydrogenase I chain J [Bacteroides fragilis YCH46]
gi|60491775|emb|CAH06533.1| putative NADH dehydrogenase chain J [Bacteroides fragilis NCTC
9343]
gi|251947581|gb|EES87863.1| NADH dehydrogenase subunit I J [Bacteroides sp. 3_2_5]
gi|263254872|gb|EEZ26306.1| NADH dehydrogenase subunit I J [Bacteroides sp. 2_1_16]
gi|301161874|emb|CBW21418.1| putative NADH dehydrogenase chain J [Bacteroides fragilis 638R]
Length = 170
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + I S L VT + + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAVFIIAMSILTVTTQRIVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + + A K+ FL I+ A L++ + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDRAAHLKRSKFLAGLVTTIIGAILVLFIT---LTHKFVPT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
S +++ IG L + Y P E +LL ++G +++ +
Sbjct: 121 SDPEPVEISIKTIGHALLSSGKYGYVLPFEAVSILLLACIVGGLLIARKR 170
>gi|160891175|ref|ZP_02072178.1| hypothetical protein BACUNI_03622 [Bacteroides uniformis ATCC 8492]
gi|270294466|ref|ZP_06200668.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317481071|ref|ZP_07940150.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
sp. 4_1_36]
gi|156859396|gb|EDO52827.1| hypothetical protein BACUNI_03622 [Bacteroides uniformis ATCC 8492]
gi|270275933|gb|EFA21793.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316902784|gb|EFV24659.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
sp. 4_1_36]
Length = 170
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + + S L VT + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAAFITVFSILTVTTHRMVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + +V E K+ FL + A ++V + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDVIEKLKRSRFLAGLGATVGGAIIVVFIT---LKHKFIAT 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + N++ IG + + Y P E +LL ++G +++ +
Sbjct: 121 TDVEPLEVNIKTIGHHMLSGDKYGYLLPFEAVSILLLACIVGGLLIARKR 170
>gi|325610548|gb|ADZ36490.1| NADH dehydrogenase subunit 6 [Stewartia rubiginosa]
gi|325610574|gb|ADZ36513.1| NADH dehydrogenase subunit 6 [Stewartia monadelpha]
gi|325610594|gb|ADZ36530.1| NADH dehydrogenase subunit 6 [Stewartia sinensis]
Length = 176
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
S V+ NPIYS FSL FV + ++L + FVA L++YVGA+ V +F +M +
Sbjct: 22 GSLGVILFPNPIYSAFSLGLVFVCISFFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFM 81
Query: 78 DIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV--- 131
+ + G I + + S + + + +
Sbjct: 82 NGSEYYKDFHLWTVGDGITSMVCTSIFVSLITTILDTSWYGIIWATKSNQILEQDLISNS 141
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ IG L T + P E+ ILL+++IGAI +
Sbjct: 142 QKIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|313183964|ref|YP_004021818.1| NADH-plastoquinone oxidoreductase subunit 6 [Equisetum arvense]
gi|281371684|gb|ADA63617.1| NADH-plastoquinone oxidoreductase subunit 6 [Equisetum arvense]
Length = 200
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 5/162 (3%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ I+ S VV++ N IYS F L F F+ A L+L L A+F+A +++YVGAV V
Sbjct: 14 IIETGIILGSLGVVSLSNIIYSAFLLGFVFICIALLYLTLNADFLAAAQILIYVGAVNVL 73
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGS-----FFIGILAAELIVCASNFMVFSAEGELSRL 124
+F +M+++ E+ K + + + I+ + ++S + ++ L
Sbjct: 74 IVFAVMLINKPKEINTLEKWNISNNISLLLCTSLFVSLSFTILNTNWSNLYSIQHSVNIL 133
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+N+ IG L T++ P E+ +LL+++IGAI + R
Sbjct: 134 DQMPSNIRLIGNNLLTKFLIPFELLSILLLVALIGAITIARR 175
>gi|323481962|ref|YP_004237305.1| NADH dehydrogenase subunit 6 [Lophelia pertusa]
gi|323461315|emb|CBZ41203.1| NADH dehydrogenase subunit 6 [Lophelia pertusa]
Length = 168
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 9/165 (5%)
Query: 21 LVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDID 80
+V++ NP++S F L+ F+N+A FLLLG +F+A++ L+VYVGA+ V FLF+IM+L++
Sbjct: 1 MVISALNPVFSPFWLVIVFINSAVFFLLLGVDFIALMFLLVYVGAIAVLFLFVIMLLNLT 60
Query: 81 IEVAEPRKKRG-FLGSFFIGILAAELIVCASNFMVF--------SAEGELSRLVFKGNNV 131
K+ IG L ++ F + + L+ +N+
Sbjct: 61 DYPPAFFKREADMTNYIPIGFLIGVFFFSEASSSWFVLGPFQKENWDLSFPWLIISYHNI 120
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
E +G+VLY ++ FILL++MIGAI L K Q +
Sbjct: 121 EALGQVLYVVCCCLFILASFILLVAMIGAIFLTQDKAPLGKTQQL 165
>gi|257459157|ref|ZP_05624276.1| NADH-quinone oxidoreductase, j subunit [Campylobacter gracilis
RM3268]
gi|257443542|gb|EEV18666.1| NADH-quinone oxidoreductase, j subunit [Campylobacter gracilis
RM3268]
Length = 175
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q+L FY FS + + + V +N +Y++ +L V +G F LL AEF+ ++ ++V
Sbjct: 1 MIQTLAFYFFSAVCLALFGISVFSKNVLYALSALAGGMVFMSGFFFLLDAEFLGVVQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAVIV + F +M L D V EP+K + I +I+ +
Sbjct: 61 YTGAVIVLYGFALMFLGADKNVNEPKKGARLFFALSGVIAFLLVIIALGAVVA---NNVE 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + ++ E +G +++T+Y E++ +LL++MI AIVL +
Sbjct: 118 TLKILNTDDTEALGMIIFTKYLAIFELAAVMLLVAMICAIVLAHKQ 163
>gi|167764934|ref|ZP_02437055.1| hypothetical protein BACSTE_03326 [Bacteroides stercoris ATCC
43183]
gi|167697603|gb|EDS14182.1| hypothetical protein BACSTE_03326 [Bacteroides stercoris ATCC
43183]
Length = 170
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + + S L VT R + S L+F AG++ LLG F+ + ++V
Sbjct: 4 NLETIVFYFLAAFISVFSILTVTTRRMVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + ++A K+ FL + A +++ + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDMAAKLKRSKFLAGLGATVAGAVIVLFIT---LKHKFIAT 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + N++ IG + + Y P E +LL ++G +++ +
Sbjct: 121 TDIEPLEVNIKTIGHHMLSGDKYGYLLPFEAVSILLLACIVGGLLIARKR 170
>gi|187736097|ref|YP_001878209.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Akkermansia
muciniphila ATCC BAA-835]
gi|187426149|gb|ACD05428.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Akkermansia
muciniphila ATCC BAA-835]
Length = 236
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 63/132 (47%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ FY+F +A++ S +VV +RNP+ S + +F A + + LGA F+ ++ ++VY
Sbjct: 5 ASDILFYVFGALAVVLSLMVVFMRNPVSSAMMMALSFGATAAVMIGLGAHFLGILQILVY 64
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F FIIM+L++ E + + I L ++ + + E
Sbjct: 65 AGAIMVLFAFIIMLLNVKQETSPFSRPFSVAIGIIIAGLFLGQLIGIIYSLPGAKETHRC 124
Query: 123 RLVFKGNNVENI 134
+ ++
Sbjct: 125 PMASAEQAWNDL 136
>gi|325610566|gb|ADZ36506.1| NADH dehydrogenase subunit 6 [Stewartia serrata]
Length = 176
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
S V+ NPIYS FSL FV + ++L + FVA L++YVGA+ V +F +M +
Sbjct: 22 GSLGVILFPNPIYSAFSLGLVFVCISFFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFM 81
Query: 78 DIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV--- 131
+ + G I + + S + + + +
Sbjct: 82 NGSEYYKDFHLWTVGDGITSMVCTSIFVSLITTILDTSWYGIIWATKSNHILEQDLISNS 141
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ IG L T + P E+ ILL+++IGAI +
Sbjct: 142 QKIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|139389318|ref|YP_001123083.1| NADH dehydrogenase ND6 [Aethionema grandiflorum]
gi|221272306|sp|A4QJQ3|NU6C_AETGR RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134286280|dbj|BAF49908.1| NADH dehydrogenase ND6 [Aethionema grandiflorum]
Length = 176
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + S VV NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLFGSIGVVLFTNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEV---AEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ G IL + +
Sbjct: 67 VGAITVLIIFAVMFMNDSEYSTDLNRWTVGDGITSLICTTILFSLISTILDTSWYGVIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|309812378|ref|ZP_07706133.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Dermacoccus
sp. Ellin185]
gi|308433683|gb|EFP57560.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Dermacoccus
sp. Ellin185]
Length = 170
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 75/173 (43%), Gaps = 3/173 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F ++ S+ VT R +++ L +G +L+LGAE VA++ L+
Sbjct: 1 MTVHDALFACLGLISAASAICAVTTRQIVHAALWLTVCLATLSGCYLVLGAELVALVQLL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V LF +M+ I + + L F F +
Sbjct: 61 VYVGAVVVLVLFAVMLTRAPIGRSGDHDAPIMTR---MAALVIAAATGGLLFSAFVSAFG 117
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
R ++ + L+ ++A+P E+ +LL +++GA+ ++ R R
Sbjct: 118 TRRARIDSGTTTDLAQNLFGRFAWPFEVVSLVLLSALVGALAMIGSRRSGGGR 170
>gi|28870537|ref|NP_793156.1| NADH dehydrogenase I subunit J [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213970027|ref|ZP_03398159.1| NADH dehydrogenase I, J subunit [Pseudomonas syringae pv. tomato
T1]
gi|301381382|ref|ZP_07229800.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. tomato
Max13]
gi|302062153|ref|ZP_07253694.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. tomato K40]
gi|302130463|ref|ZP_07256453.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28853785|gb|AAO56851.1| NADH dehydrogenase I, J subunit [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213925131|gb|EEB58694.1| NADH dehydrogenase I, J subunit [Pseudomonas syringae pv. tomato
T1]
gi|330875765|gb|EGH09914.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330965584|gb|EGH65844.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331017279|gb|EGH97335.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 169
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G +IG + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERAWLKPG-IWIGPVILGTLLLAELLYVLFANPTGAAI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + I A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAITAFHLGRNEAKE 166
>gi|292492180|ref|YP_003527619.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosococcus
halophilus Nc4]
gi|291580775|gb|ADE15232.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosococcus
halophilus Nc4]
Length = 167
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FY+ +F+A++S+ +V+T NP++++ LI + ++ A +F LLGA F A + +++Y G
Sbjct: 2 EITFYIAAFVAVVSTAMVITRLNPVHALLYLIVSLLSVALIFFLLGAPFAAALEVLIYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E + + + +++ +++ LS
Sbjct: 62 AIMVLFVFVVMMLNLGKEAIAQENRWLNPQMWIGPGALSFILLIELIYLLEKESSLLSSA 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G+ L+ Y +E++ +LL ++GA L R + +
Sbjct: 122 --EMVEPQQVGRALFGPYLLAVELAAMLLLAGLVGAYHLGRREQEE 165
>gi|66046434|ref|YP_236275.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. syringae
B728a]
gi|289679208|ref|ZP_06500098.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. syringae
FF5]
gi|302185031|ref|ZP_07261704.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. syringae
642]
gi|63257141|gb|AAY38237.1| NADH dehydrogenase (quinone) [Pseudomonas syringae pv. syringae
B728a]
gi|330900635|gb|EGH32054.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330954555|gb|EGH54815.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae Cit
7]
gi|330972915|gb|EGH72981.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
aceris str. M302273PT]
gi|330981362|gb|EGH79465.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 169
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G +IG + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERAWLKPG-IWIGPVILGALLLAELLYVLFANPTGAGV 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + I A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAITAFHLGRNEAKE 166
>gi|163751854|ref|ZP_02159069.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Shewanella
benthica KT99]
gi|161328270|gb|EDP99432.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Shewanella
benthica KT99]
Length = 208
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 81/171 (47%), Gaps = 4/171 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F + + +AIIS+ L V+ N ++++ L+ + A +F +LG+ F A + ++VY
Sbjct: 1 MIDIIFCISAAVAIISALLTVSAHNVVHALLYLVTMMLAIALIFFMLGSPFAAALQIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV+V F+F+ MML ++ ++ + L+V + + G
Sbjct: 61 AGAVMVLFVFVTMMLHQGERSLAAERQLFNPQVAKGPLILSALLVIELILLSLGSVGLHQ 120
Query: 123 RLVFK----GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
++ V+ + L+ Y + ++ +LL +++ AI + + +
Sbjct: 121 EILTGSLPVDQTVKQLAIQLFGSYRVLVVLAAIMLLAALVSAIHITKQGNK 171
>gi|332971770|gb|EGK10718.1| NADH-quinone oxidoreductase subunit J [Desmospora sp. 8437]
Length = 168
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 85/170 (50%), Gaps = 5/170 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ + AI + ++ ++ V SL F ++ AG+++LL AEF+A+ ++
Sbjct: 4 MSGEFIAFFVLAVCAIGGAVFMLNFTRVVHMVLSLAFTLLSIAGIYVLLNAEFLAVAQVL 63
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y G+V + LF IM+ + R F +G L LI +++ E
Sbjct: 64 IYTGSVSILMLFGIMLTRHRDQEETVRPWHSFFSFVGVGALFGILIH-----TIYNTPFE 118
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
S K V +G++++ QY P E +LL++++GA++L + +
Sbjct: 119 ESTASVKEFTVSRLGEIVFKQYVIPFEALSVLLLVALVGAVILARKESKS 168
>gi|71737794|ref|YP_275287.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558347|gb|AAZ37558.1| NADH-quinone oxidoreductase, J subunit [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320323796|gb|EFW79880.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. glycinea
str. B076]
gi|320327935|gb|EFW83940.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330881175|gb|EGH15324.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
glycinea str. race 4]
Length = 169
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G +IG + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERAWLKPG-IWIGPVILGTLLLAELLYVLFANPTGAAI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|33519936|ref|NP_878768.1| NADH dehydrogenase I chain J [Candidatus Blochmannia floridanus]
gi|33504282|emb|CAD83174.1| NADH dehydrogenase I chain J [Candidatus Blochmannia floridanus]
Length = 183
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 3/169 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ FY+ +AII++ LV+ NPIY++ LIF+ + + L A F I +++Y GA
Sbjct: 3 VLFYVSGIIAIIATILVIISNNPIYALLYLIFSLLCTSCNLFSLNASFAGSIEIIIYAGA 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI---VCASNFMVFSAEGELS 122
++V F+F IMM D+ + K S I + A+ LI + F +
Sbjct: 63 IMVLFMFSIMMFDMKNIILNVCNKEYTFLSLRICVGASLLISALLIIVLFSILQITNCFI 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ +++ IG L+ Y +E++ F+LL ++I I + + +
Sbjct: 123 DGINCVIDIKQIGITLFGPYMLIVEVASFLLLSALIAVIHIAQEDKDYV 171
>gi|229099727|ref|ZP_04230653.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock3-29]
gi|228683697|gb|EEL37649.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock3-29]
Length = 153
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F IM+ +
Sbjct: 1 MLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGIMLTKHNA 60
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ 141
E R FF + ++ A N + FS E L N IG +LY++
Sbjct: 61 -ENESRLTLRKWIIFFAVVAFGAVMYFAVNSIDFSNESTQGSLPLHEKNTLQIGTLLYSE 119
Query: 142 YAYPLEISGFILLLSMIGAIVLMLRHRRD 170
Y P E++ ILL++++GAI+L + ++
Sbjct: 120 YIIPFELTSVILLVALVGAIILAKKDEKE 148
>gi|257485448|ref|ZP_05639489.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|330987950|gb|EGH86053.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331010719|gb|EGH90775.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
tabaci ATCC 11528]
Length = 169
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G +IG + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERAWLRPG-IWIGPVILGTLLLAELLYVLFANPTGAAI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|262376769|ref|ZP_06069997.1| NADH dehydrogenase subunit I J [Acinetobacter lwoffii SH145]
gi|262308479|gb|EEY89614.1| NADH dehydrogenase subunit I J [Acinetobacter lwoffii SH145]
Length = 173
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/161 (30%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AI+S+ VVT NP++++ SLI + + AG+FL++GA F + ++VY GA++
Sbjct: 5 FYLMALVAIVSTVRVVTNANPVHALLSLIVSLLAVAGMFLIVGAPFAGALEVIVYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV-F 126
V F+F++MML++ + E +K ++ L + LI +++ S + S ++
Sbjct: 65 VLFVFVVMMLNLGEQTVEQERKWLTSSAWAYPALMSFLIGLVLVWVLNSDYTQASLVMGT 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L+TQY +E++ +LL +++ A L R
Sbjct: 125 EMVGPKAVGQALFTQYLLLVEVAAMLLLAALVAAFHLGKRE 165
>gi|253698807|ref|YP_003019996.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
M21]
gi|251773657|gb|ACT16238.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
M21]
Length = 160
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + FY+ + + +I + +T R + ++ L+ +F A +F LLGA FVA + +++Y
Sbjct: 1 MERIIFYILAAVTVIGTLCAITARQAVRAIVYLVTSFFALALIFYLLGAPFVAALEVIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF+IMM+++ P+ I +L V ++ V A
Sbjct: 61 AGAIMVLFLFVIMMVELASPEKLPKPTLSDWWPALILVL-----VVVASLTVLVAGQAPP 115
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V +VL+T+Y +E+ LL +++GA+ L R
Sbjct: 116 VPGAGAQTVRQFSQVLFTRYGVAIELVSMQLLFALVGALYLGRRR 160
>gi|311896695|dbj|BAJ29103.1| putative NADH-quinone oxidoreductase subunit J [Kitasatospora setae
KM-6054]
Length = 236
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 23 VTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIE 82
VT R +++ L+ A A FLLL AEFVA + ++VY+G+VIV LF +M+ I
Sbjct: 43 VTTRQLVHAALWLVVALGGLAVEFLLLTAEFVAWVQVLVYLGSVIVLVLFGLMLTRAPIG 102
Query: 83 VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQY 142
+ + +G +A +V +V + L G+ L++ +
Sbjct: 103 RSPDADSGNRPAALAVGAASAATLV---TLVVDAFRSSWIDLSGAAGTTRLTGEYLFSHW 159
Query: 143 AYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
P E +LL +++GAIVL K
Sbjct: 160 VLPFEALSVLLLAALVGAIVLSRTEGGRAK 189
>gi|262369341|ref|ZP_06062669.1| NADH dehydrogenase subunit I J [Acinetobacter johnsonii SH046]
gi|262315409|gb|EEY96448.1| NADH dehydrogenase subunit I J [Acinetobacter johnsonii SH046]
Length = 173
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL + +AI+S+ VVT NP++++ SLI + + AG+F+++GA F + ++VY GA++
Sbjct: 5 FYLMALVAIVSTIRVVTNANPVHALLSLIVSLLAVAGMFMIVGAPFAGALEIIVYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV-F 126
V F+F++MML++ E +K ++ L + L+ +M+ S ++
Sbjct: 65 VLFVFVVMMLNLGQHTVEQERKWLTSSAWAYPALMSFLMGLVLVWMLGSDYTVAGPVMGT 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +G+ L+T Y +E++ +LL +++ A L R
Sbjct: 125 EVVGPKAVGQALFTHYLLLVEVAAMLLLAALVAAFHLGKRE 165
>gi|301353376|ref|YP_003795634.1| NADH-plastoquinone oxidoreductase subunit 6 [Pteridium aquilinum
subsp. aquilinum]
gi|301016294|gb|ADK47581.1| NADH-plastoquinone oxidoreductase subunit 6 [Pteridium aquilinum
subsp. aquilinum]
Length = 195
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 73/174 (41%), Gaps = 5/174 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ L + S V+ N +S FSL F + + +L A+ VA +V
Sbjct: 6 SIHEFILALIESGIPLGSLGAVSFANLTHSAFSLGLVFTRISLSYFVLNADSVAAAQSLV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----MVFS 116
YVGA+ V + +M+ D + G+ + + ++ + + F
Sbjct: 66 YVGAINVSIVSAVMVTDQPTRSNSTSRNIGYFIALGACAILFSVLTNMIHNTKWFDVSFI 125
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ E+ G+NV+ +G L T++ P E++ +LL++++GAI +
Sbjct: 126 TQSEILAANTSGSNVQQLGYKLLTEFLVPFELASILLLVALVGAINPARDEDTN 179
>gi|325610641|gb|ADZ36569.1| NADH dehydrogenase subunit 6 [Stewartia crassifolia]
Length = 176
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 6/154 (3%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
S V+ NPIYS FSL FV + ++L + FVA L++YVGA+ V +F +M +
Sbjct: 22 GSLGVILFPNPIYSAFSLGLVFVCISFFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFM 81
Query: 78 DIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV--- 131
+ + G I + + S + + + +
Sbjct: 82 NGSEYSKDFHLWTVGDGITSMVCTSIFVSLITTILDTSWYGIIWATKSNQILEQDLISNS 141
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ IG L T + P E+ ILL+++IGAI +
Sbjct: 142 QKIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|325280128|ref|YP_004252670.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Odoribacter
splanchnicus DSM 20712]
gi|324311937|gb|ADY32490.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Odoribacter
splanchnicus DSM 20712]
Length = 169
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 68/166 (40%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ F + + ++ S L VT + + S L+F AG++ L F+ + L V
Sbjct: 4 TLPQAVFLFLAAVIVVCSILTVTTKRILRSATYLLFVLFATAGIYFELNYSFLGAVQLTV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G +IV ++F I++ D + A+ K F + A L + + F +
Sbjct: 64 YAGGIIVLYVFSILLTSSDNKKADKIKNSKFFAGILAAVGGAALCIFITLTHSFPVSHFV 123
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + QY P E+ +LL +IG I++ +
Sbjct: 124 PGEINQKVIGTALMGTEKYQYLLPFEVISVLLLACIIGGILIARKR 169
>gi|330889652|gb|EGH22313.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
mori str. 301020]
Length = 169
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G +IG + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERAWLKPG-IWIGPVILGTLLLAELLYVLFANPTGAAI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|197294162|ref|YP_002149782.1| NADH-plastoquinone oxidoreductase subunit 6 [Cicer arietinum]
gi|221272317|sp|B5LMS3|NU6C_CICAR RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|197089850|gb|ACH41120.1| NADH-plastoquinone oxidoreductase subunit 6 [Cicer arietinum]
Length = 176
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 6/170 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ I+ S VV + NPI+S FSL V + ++L + FVA L++
Sbjct: 6 TLHDFLLVFLGSGLILGSLGVVLLTNPIFSAFSLGLVLVCISLFYILSNSHFVAASQLLI 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ + +F +M ++ + G I + + + +
Sbjct: 66 YVGAINILIIFAVMFMNSSEYYQDFNLWTVGDGITLIVCTSIFVSLVTTIPDTSWYGIIW 125
Query: 122 SRLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + IG L T + P E+ ILL+++IG IV+
Sbjct: 126 TTRPNQIIEQDLISTSQQIGIHLSTDFFLPFELISIILLVALIGTIVVAR 175
>gi|329962488|ref|ZP_08300488.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
fluxus YIT 12057]
gi|328530044|gb|EGF56932.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
fluxus YIT 12057]
Length = 170
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + + S L VT + S L+F AG++ LLG F+ + ++V
Sbjct: 4 NLETVVFYFLAAFITVFSILTVTTHRMVRSATYLLFVLFGTAGIYFLLGYTFLGSVQIMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + ++A K+ FL I A +++ + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDIAGKLKRSKFLAGLGTTIGGAVIVLFIT---LNHKFIAT 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + N++ IG + + Y P E +LL ++G +++ +
Sbjct: 121 TDVEPLEVNIKTIGHHMLSGDKYGYLLPFEAVSILLLACIVGGLLIARKR 170
>gi|116749372|ref|YP_846059.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Syntrophobacter fumaroxidans MPOB]
gi|116698436|gb|ABK17624.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Syntrophobacter fumaroxidans MPOB]
Length = 172
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + FY+ + + + S+ + +T RN +++V LIF++ A LF L GA +A ++
Sbjct: 1 MTLYAFLFYIVAGITVASTAMAITRRNLVHAVIYLIFSYFGTAVLFYLFGAPLLAAFEVI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA++V FLFI+MM+ I+ G + + + + M+ + G
Sbjct: 61 IYAGAIMVLFLFIVMMIRIESYGE----LMFPPGQWLPAAVFGLVYLVVGILMISATPGT 116
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L + ++ + +EI +LL++++GA+ L R+
Sbjct: 117 EIPLQTVLATPREFARYVFQNHWLSVEIVSLLLLVALVGALHLGRHKGRN 166
>gi|325104668|ref|YP_004274322.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pedobacter
saltans DSM 12145]
gi|324973516|gb|ADY52500.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pedobacter
saltans DSM 12145]
Length = 180
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 12/177 (6%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + FYL + +AI+S+ VVT +N + SVF +AGL++ A+FVA+ +V+Y
Sbjct: 1 MEQILFYLLAGIAILSACYVVTSQNLVRSVFMFFVTLFASAGLYIFALADFVALTQIVIY 60
Query: 63 VGAVIVFFLFIIMML------DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS 116
VG V+V LF+ M+ +D + + G+ + A LI S
Sbjct: 61 VGGVLVMLLFVFMLSSKKSLQGLDGLTKQKLSENRLPGAILSLSVFAILIYTIFQIDFNS 120
Query: 117 AEGELSRLV------FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S + N+ NIG L T + P E+ +L++ +IGA L +
Sbjct: 121 LSWIQSAIATDNVKLPSDENISNIGINLMTGFLLPFELICVLLMMVLIGAAHLARKE 177
>gi|229076507|ref|ZP_04209469.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock4-18]
gi|228706693|gb|EEL58904.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus cereus
Rock4-18]
Length = 153
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/149 (27%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
++ + ++ + +L+ F++ AGL+ LL AEF+ + +++Y GA+ + +F IM+ +
Sbjct: 1 MLNLTKVMHMMLALVLTFLSIAGLYFLLSAEFIGVAQILLYSGAITIIMIFGIMLTKHNA 60
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ 141
E R FF + ++ A N + FS E L N IG +LY++
Sbjct: 61 -ENESRLTLRKWIIFFAVVAFGAVMYFAVNSIDFSNESTQGSLPLHEKNTLQIGTLLYSK 119
Query: 142 YAYPLEISGFILLLSMIGAIVLMLRHRRD 170
Y P E++ ILL++++GAI+L + ++
Sbjct: 120 YIIPFELTSVILLVALVGAIILAKKDEKE 148
>gi|320107668|ref|YP_004183258.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Terriglobus
saanensis SP1PR4]
gi|319926189|gb|ADV83264.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Terriglobus
saanensis SP1PR4]
Length = 168
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 87/168 (51%), Gaps = 2/168 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
MQ + F +F+ + + + ++ R+PI S SL+ ++ A ++ LGAEF+A ++VY
Sbjct: 1 MQLVLFLIFAVLCVAGALNLLFQRHPINSALSLVVVMMSLAVIYWTLGAEFLAAAQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI--GILAAELIVCASNFMVFSAEGE 120
GAV+V F+F++M+L+ E + ++ ILA +
Sbjct: 61 AGAVMVLFVFVVMLLNAGEEERTTGSRAAYIAGIPGVAAILALLTYIFMHERAALGYATL 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
L +N+ I +VL+T+ P E++ ++L++++GA+VL + +
Sbjct: 121 GGSLNHTTSNITEISRVLFTELLLPFEVTSILILVAILGAVVLARKEQ 168
>gi|254282451|ref|ZP_04957419.1| NADH dehydrogenase i chain j [gamma proteobacterium NOR51-B]
gi|219678654|gb|EED35003.1| NADH dehydrogenase i chain j [gamma proteobacterium NOR51-B]
Length = 169
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 82/164 (50%), Gaps = 3/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L FYL + +A+ ++ + +T N +++ LI + + A +F +LGA F A + +++Y
Sbjct: 1 MTVLLFYLTAALAVFATVVALTRANAAHALIYLILSLLAVAVMFFMLGAPFAAALEVLIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F+IMML++ E + + + L +++ + + S
Sbjct: 61 AGAIMVLFVFVIMMLNLGDAGEEQERGWLDARLWIVPGLLTTVLLVEMLLVFGESGVTTS 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +G LY Y +E++ +L+ +++GA + R
Sbjct: 121 GHSVSP---KEVGISLYGPYVLAVELASMLLMAALVGAYHVARR 161
>gi|289066874|ref|YP_003434392.1| NADH-plastoquinone oxidoreductase subunit 6 [Vigna radiata]
gi|259020061|gb|ACV90259.1| NADH-plastoquinone oxidoreductase subunit 6 [Vigna radiata]
Length = 176
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 6/170 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ I+ S VV NPI+S FSL V + ++L + FVA L++
Sbjct: 6 SLHDFILIFLGSGLILGSLGVVFFTNPIFSAFSLGLVLVCVSLFYILSNSHFVAASQLLI 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ V +F +M ++ R G + + L +
Sbjct: 66 YVGAINVLIIFAVMFMNGSDYYQNFRVWTVGDGITLMVCTSIFLSQITTILDTSWHGIIW 125
Query: 122 SRLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 126 TTRPNQILEQDLISTSQQIGIHLSTDFFLPFELISIILLVALIGAIFVAR 175
>gi|50261311|ref|YP_052920.1| NADH dehydrogenase subunit 6 [Saprolegnia ferax]
gi|48237624|gb|AAT40673.1| NADH dehydrogenase subunit 6 [Saprolegnia ferax]
Length = 233
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 65/227 (28%), Positives = 106/227 (46%), Gaps = 36/227 (15%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ FF+LFS +A+ S+ V+ +N +YSVF LI F N GL L+ EF+A++ +++YV
Sbjct: 7 EVFFFFLFSSIALTSAIFVIYSKNTVYSVFFLILVFTNMTGLLLVAEVEFLAIMLIIIYV 66
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF----------- 112
GA+ V FLF++MMLDI F I + +
Sbjct: 67 GAITVLFLFVVMMLDIKKIETNNNNYGYLPIIFLISFIFFIETFTIFSKSFTSYQYFIHK 126
Query: 113 -----------------------MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEIS 149
V + + N+E +G++LYT A+ L +
Sbjct: 127 NLAMETYARLCEDWTWRYSPAYETVPYFHNQWHLKLDLITNIETLGQILYTYNAFFLLAA 186
Query: 150 GFILLLSMIGAIVLMLRHRRDIK--RQDISKQLESNPDNSIVMVKVK 194
G ILL+++IGA+ L L+ ++D K +++ KQL N N++ +K K
Sbjct: 187 GLILLIALIGAVTLTLKEKKDKKFSTKNLYKQLSRNYINAVYNIKQK 233
>gi|289649283|ref|ZP_06480626.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. aesculi str.
2250]
Length = 169
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFTSGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G +IG + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERAWLKPG-IWIGPVILGTLLLAELLYVLFANQTGAAI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|239907424|ref|YP_002954165.1| putative NADH-quinone oxidoreductase chain J [Desulfovibrio
magneticus RS-1]
gi|239797290|dbj|BAH76279.1| putative NADH-quinone oxidoreductase chain J [Desulfovibrio
magneticus RS-1]
Length = 172
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 3/172 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F +S +A+ L V+ + + ++ L+ + AGL+LLL A+FVA++ ++
Sbjct: 4 MYLGQTAFAFYSLIALAGGVLAVSAASLVRAMLGLVVSLFGVAGLYLLLLADFVALMQIL 63
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGAV V F IM+ + E + + + V+ G
Sbjct: 64 IYVGAVTVLIFFAIMLTRASADGGEGQGPGLRGSLRGVFGALLPAGILVPCLAVYGVAGF 123
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ +G L Y E+ +LL +M GA++L R K
Sbjct: 124 PTPKNVSP---AELGAGLLGPYTMAFELISVVLLAAMAGAVLLAFEKRGAAK 172
>gi|11497584|ref|NP_054991.1| NADH dehydrogenase subunit 6 [Spinacia oleracea]
gi|18203253|sp|Q9M3I8|NU6C_SPIOL RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|7636165|emb|CAB88787.1| NADH dehydrogenase ND6 subunit [Spinacia oleracea]
Length = 176
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ + VV NPI+S FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGALGVVLFTNPIFSAFSLGLVLVCISLFYILANSHFVASAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M + + + G + ++ + + ++ +
Sbjct: 67 VGAINVLIIFSVMFMSGPEYDKKFQLWTVGDGVTSLVCISLFVSLISTILNTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ N + IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TKSNQILEQDLINASQQIGIHLSTDFFLPFELISIILLVSLIGAIAVAR 175
>gi|281428836|ref|YP_003355013.1| NADH dehydrogenase subunit 6 [Ircinia strobilina]
gi|251765336|gb|ACT15488.1| NADH dehydrogenase subunit 6 [Ircinia strobilina]
Length = 169
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 12/175 (6%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F YL S ++S+ +V+ ++ +Y+V SL+ AF+N AGLF++LG EF+A + L+VY
Sbjct: 1 MYLFFCYLLSVGIMLSAVMVICSKSSVYAVLSLVSAFLNVAGLFVVLGVEFLAFLLLLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF++M+L ++ + + K + + F L +
Sbjct: 61 VGAIMVLFLFVLMILMLNEDELQGEKSKLVVFVFLFFFLFLFCFKIG--------QVTFP 112
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM----LRHRRDIKR 173
+ +G+ LY +Y FILLL+MIG + L+ +KR
Sbjct: 113 NWGANERGIVLLGRGLYIEYGEAFIAGSFILLLAMIGVVELVGDLIWESNSGVKR 167
>gi|301347607|ref|ZP_07228348.1| NADH dehydrogenase I chain J [Acinetobacter baumannii AB056]
Length = 168
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 89/160 (55%), Gaps = 1/160 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
YL + +AI+S+ VVT NP++++ SLI + + AG+F+++GA F + ++VY GA++V
Sbjct: 1 YLMALVAIVSTVRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIMV 60
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSF-FIGILAAELIVCASNFMVFSAEGELSRLVFK 127
F+F++MML++ E +K ++ + +++ L + + + L +
Sbjct: 61 LFVFVVMMLNLGQHTVEQERKWLSSDAWAYPALMSFLLGLLLVWMLGGEYTTISAPLGAR 120
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +G+ L+T Y +E++ +LL +++ A L R
Sbjct: 121 VIGPKVVGQALFTHYLLLVEVAAMLLLAALVAAYHLGKRE 160
>gi|237800534|ref|ZP_04588995.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331023394|gb|EGI03451.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 169
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G +IG + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERAWLKPG-IWIGPVILGTLLLAELLYVLFANQTGAAI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + I A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAITAFHLGRNEAKE 166
>gi|298487556|ref|ZP_07005598.1| NADH-ubiquinone oxidoreductase chain J [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157940|gb|EFH99018.1| NADH-ubiquinone oxidoreductase chain J [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 169
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G +IG + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERAWLKPG-IWIGPVILGTLLLAELLYVLFANQTGAAI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 SHTTVDAKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|325105658|ref|YP_004275312.1| NADH dehydrogenase subunit J [Pedobacter saltans DSM 12145]
gi|324974506|gb|ADY53490.1| NADH dehydrogenase subunit J [Pedobacter saltans DSM 12145]
Length = 167
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 91/163 (55%), Gaps = 2/163 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY +F++I S LV+ +NP++SV LI F ++LL A+F+A++ +VY+GA+
Sbjct: 3 LFYFVAFLSIFFSLLVIFTKNPVHSVLYLIATFFTFTIHYILLNAQFLAVVNFIVYMGAI 62
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V FLF++M+++++ + + + G L+ + +
Sbjct: 63 MVLFLFVLMLMNLNKDTEPMKSNLLKIVGVIAG--GGLLVTLVAAMKTMYTDSPSVLQNP 120
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ V+N+GKVL++++ P E+S +LL +M+GA++L + +R
Sbjct: 121 EIGLVKNLGKVLFSEFLLPFELSSLLLLSAMVGAVLLAKQEKR 163
>gi|289625434|ref|ZP_06458388.1| NADH dehydrogenase subunit J [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|330866830|gb|EGH01539.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
aesculi str. 0893_23]
Length = 169
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G +IG + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERAWLKPG-IWIGPVILGTLLLAELLYVLFANQTGAAI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|313681403|ref|YP_004059141.1| NADH dehydrogenase subunit j [Sulfuricurvum kujiense DSM 16994]
gi|313154263|gb|ADR32941.1| NADH dehydrogenase subunit J [Sulfuricurvum kujiense DSM 16994]
Length = 195
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FYLF+ + I+ + V +Y++ ++ + + F +LGA+F+ I ++V
Sbjct: 1 MFEAIAFYLFAALTIVMFTITVMTSQALYAITAMAAGMIFISAFFFILGADFLGAIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D +V E R + + + A ++ +V + L
Sbjct: 61 YTGAVMALYAFGMMFFDTTRDVVEKRTNPQIVFVLGV-LAAVMVVAIFVAPIVSNNIQAL 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ N + +G VL+T+Y P E++ +LL++MIG I+L +
Sbjct: 120 YPIQENIGNSQAVGMVLFTKYLVPFEVAAVMLLVAMIGGIILAGKKMDKS 169
>gi|226315024|ref|YP_002774920.1| NADH dehydrogenase subunit J [Brevibacillus brevis NBRC 100599]
gi|226097974|dbj|BAH46416.1| NADH-quinone oxidoreductase chain J [Brevibacillus brevis NBRC
100599]
Length = 169
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F++ S + I + +++ ++ V SL F++ AGLF+LLGAEFV + ++
Sbjct: 1 MTGEFVAFFILSLLTIGGAVFMISFTRVVHMVISLGVTFISIAGLFVLLGAEFVGVAQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA+ + LF IM+ D + I+ L+
Sbjct: 61 VYSGAISILMLFGIMLTKHDANDEGTGRTWKNRFILLFVIVLFGLLFW--GVQNTPWPAP 118
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
NN + IG ++T++ P E+ +LL++++GAI++ + +
Sbjct: 119 PPPADAPVNNAKEIGIEVFTKFVIPFELLSVLLLVALVGAIIMAKKEGDN 168
>gi|78221390|ref|YP_383137.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Geobacter
metallireducens GS-15]
gi|78192645|gb|ABB30412.1| NADH dehydrogenase subunit J [Geobacter metallireducens GS-15]
Length = 161
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+S FY+ + + + + +T ++ ++++ L+ +F A +F LLGA VA+ +++Y
Sbjct: 1 MESALFYILAVVTVTGTAFAITEKHAVHAIVYLVTSFFALAVIFFLLGAPVVAIFEVIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF+IMMLD+ P + R + LA + AS + +
Sbjct: 61 AGAIMVLFLFVIMMLDL----GHPERARLPGIREWWPALALGAVTLASALALVVSRAPAI 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
K V+ L+ +Y +E+ LL +++GA+ L +
Sbjct: 117 PAPGKAIGVKEFALALFGKYGVAVEVISMQLLFALVGALYLARKR 161
>gi|299140921|ref|ZP_07034059.1| NADH dehydrogenase I, subunit 6 [Prevotella oris C735]
gi|298577887|gb|EFI49755.1| NADH dehydrogenase I, subunit 6 [Prevotella oris C735]
Length = 168
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 4/165 (2%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + + + + S+ + V + + S L+F AG++ LL F+ + VY G +
Sbjct: 1 MFCILAVVILGSAIMCVLTKRIMRSATFLLFVLFGVAGIYFLLDYTFLGAAQISVYAGGI 60
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ ++F I ++ + + I + L+ + + +
Sbjct: 61 TMMYIFAIQLVSKRTLQGLVERFKVSRVVNGILLSTVGLVTVGLVLIKNNFYNAAMQATD 120
Query: 127 KGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+E IG L QY P E LL +IG I++ +
Sbjct: 121 TEVPMEQIGTALLGSDKYQYVLPFEFISLFLLACIIGGIMIARKE 165
>gi|77459833|ref|YP_349340.1| NADH dehydrogenase subunit J [Pseudomonas fluorescens Pf0-1]
gi|77383836|gb|ABA75349.1| NADH dehydrogenase subunit J [Pseudomonas fluorescens Pf0-1]
Length = 166
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ VVT NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVVTNTNPVHALLYLIISLIAVAMTFFALGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G + ++ A L++ +++F+ + + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERTWLKPGIWAGPVILAALLLAELLYVLFAHQSGQA-I 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 GQTTVDAKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|39998522|ref|NP_954473.1| NADH dehydrogenase I subunit J [Geobacter sulfurreducens PCA]
gi|39985469|gb|AAR36823.1| NADH dehydrogenase I, J subunit [Geobacter sulfurreducens PCA]
gi|298507466|gb|ADI86189.1| NADH dehydrogenase I, J subunit [Geobacter sulfurreducens KN400]
Length = 163
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 4/167 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ FY+ + + +I++ L +T ++ ++++ L+ +F A +F LGA VA+ +++Y
Sbjct: 1 MEQALFYILAAVTVIATVLAITEKHAVHAIVYLVTSFFALAVIFFTLGAPVVAVFEVIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF+IMMLD+ P + R + LA + AS + + + +
Sbjct: 61 AGAIMVLFLFVIMMLDL----GHPERARRPGIRDWWPALALGAVTLASALTLLISRAQAA 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ V+ L+ +Y +E+ LL +++GA+ L R R
Sbjct: 117 SAAGRAIGVKEFALTLFGKYGVAVEVISMQLLFALVGALYLAKRRER 163
>gi|322378674|ref|ZP_08053107.1| NADH dehydrogenase subunit J [Helicobacter suis HS1]
gi|321148891|gb|EFX43358.1| NADH dehydrogenase subunit J [Helicobacter suis HS1]
Length = 181
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 6/180 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + FY F+ + + +VV+ N +Y++ +L + V +G F LLGAEF+ ++ ++V
Sbjct: 1 MFEVIAFYFFAIFTLSMALIVVSTSNILYAMSALAASMVFISGFFFLLGAEFLGVVQILV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAVIV + F +M + EV E K + +++ + + A
Sbjct: 61 YVGAVIVMYAFGMMFFNASEEVIERSHKPWLVYILGGVFALLLVVILGAPALNNYAHHLS 120
Query: 122 S------RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+ NV +G ++T+Y E G +LL ++IG I LR ++++
Sbjct: 121 AENLQIVTPNLSTTNVHLMGYFVFTKYRIAFEAGGVMLLSALIGGITTALRKSYLSQKEN 180
>gi|158604903|gb|ABW74727.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Campylobacter
concisus 13826]
Length = 178
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +S FYLFS + ++S V +N + +V +L + + +F LLGAEF+ ++ +VV
Sbjct: 1 MYESFAFYLFSALILVSFSFSVLCKNALNAVSALAAGMIFISAIFFLLGAEFLGVVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIE-VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
Y GAV+V + F +M D E + KK + +A LI + + +
Sbjct: 61 YTGAVVVLYAFAMMFFDTSKECEPKSGKKAKIIVYLLSSFIALLLIFIFLAPIYSAKQEV 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
++ + N+E +G +L+++Y E+ +LL++M+ I+L+ +
Sbjct: 121 VNSTLANLGNIEAVGILLFSKYLLAFEMCAIMLLVAMVAGIILIHK 166
>gi|237752483|ref|ZP_04582963.1| NADH oxidoreductase I [Helicobacter winghamensis ATCC BAA-430]
gi|229375972|gb|EEO26063.1| NADH oxidoreductase I [Helicobacter winghamensis ATCC BAA-430]
Length = 184
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FY+F + + +VVT +N +Y++ +L + + F LLGAEF+ ++ +VV
Sbjct: 1 MFEAIAFYVFCALTLAMFLVVVTTQNILYALSALAAGMMFVSAFFFLLGAEFLGVVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAE--PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
Y GAVI + F +M D E K F S +L ++V ++
Sbjct: 61 YTGAVIALYAFAMMFFDAQKLENEKVQSPKMLFFLSGMGALLLVLIVVAPVIAENLASLQ 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ + + NV+ +G VL+T++ P EI+ +LL++MI IVL +
Sbjct: 121 ATTPIKEEIGNVQMVGYVLFTKFLIPFEIAAVMLLVAMIAGIVLAGK 167
>gi|292559473|ref|YP_003540841.1| NADH dehydrogenase subunit 6 [Hartmannella vermiformis]
gi|290775726|gb|ADD62225.1| NADH dehydrogenase subunit 6 [Hartmannella vermiformis]
Length = 205
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 61/194 (31%), Positives = 104/194 (53%), Gaps = 13/194 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F+ +FM ++ LV+ +NP+ SV L+ F +A LF+LL +F+AM+ ++V
Sbjct: 1 MLTEVIFFGLAFMIFLAGLLVIFSKNPVQSVLFLVVVFCLSAQLFVLLEVDFLAMVLIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE- 120
YVGA+ V FLFI+MML+I + R F + +G++ IV + + +
Sbjct: 61 YVGAIAVLFLFIVMMLNIRVVELSEILNRYFPLATIVGLIIFSEIVFSLYYSLGYNYSNI 120
Query: 121 ----LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD------ 170
+ +NV ++G VLYT ++ L ISG +LLL+MI +I+L L
Sbjct: 121 FYLDWYKSFLNHSNVVSLGLVLYTYFSPFLIISGILLLLAMISSIMLTLDLPNSGELNLS 180
Query: 171 --IKRQDISKQLES 182
+K+Q I Q++
Sbjct: 181 TLVKKQSIPDQVDR 194
>gi|330810471|ref|YP_004354933.1| NADH-quinone oxidoreductase subunit J [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|19483811|gb|AAL89572.1| NADH dehydrogenase I subunit J [Pseudomonas fluorescens]
gi|327378579|gb|AEA69929.1| NADH-quinone oxidoreductase subunit J [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 166
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ VVT NP++++ LI + + A F LGA F + ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVVTNTNPVHALLYLIISLIAVAMTFFALGAPFAGALEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G + ++ + L++ +++F+ + + +
Sbjct: 62 AIMVLFVFVVMMLNLGPAAVQQERSWLKPGIWAGPVILSALLLGELLYVLFAHQSGQA-I 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|296040753|gb|ADG85344.1| NADH dehydrogenase subunit 6 [Silene conica]
Length = 157
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+A++S +VV +NP++SV I F N AGL LLLG +F AMI LVVY+GA+ V FLF+
Sbjct: 1 LALVSGLMVVRAKNPVHSVLFFILVFCNTAGLLLLLGLDFFAMIFLVVYIGAIAVLFLFV 60
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELS 122
+MM I I R S IG++ + +
Sbjct: 61 VMMFHIQIAEIHEEVLRYLPVSGLIGLIFWWEMFFILDNENIPLLPTQGQTNSLTYMVYA 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
V N+E +G +LYT Y +S ILL++MIG
Sbjct: 121 GKVRSWTNLETLGNLLYTHYFVWFLVSSLILLVAMIG 157
>gi|333025063|ref|ZP_08453127.1| putative NADH dehydrogenase subunit I J [Streptomyces sp. Tu6071]
gi|332744915|gb|EGJ75356.1| putative NADH dehydrogenase subunit I J [Streptomyces sp. Tu6071]
Length = 211
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 29 IYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRK 88
+++ L+ A +LLL AEF+A + +++YVG+V+V LF +M+ I ++
Sbjct: 1 MHAALWLVVTLGGLAVEYLLLTAEFIAWVQVLIYVGSVVVLLLFGLMLTRAPIGRSDDAD 60
Query: 89 KRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEI 148
R + + +LAA +V F G L+ + P E
Sbjct: 61 SRNRPLAAAVALLAAAGLVWVVTD-AFRTTYIHLDGAHPQGTTAVTGAFLFRHWVLPFEA 119
Query: 149 SGFILLLSMIGAIVLMLRHRRD 170
+LL +++GAIVL R
Sbjct: 120 LSVLLLAALVGAIVLSRRRDDG 141
>gi|164421164|ref|YP_001648648.1| NADH dehydrogenase subunit 6 [Hippospongia lachne]
gi|158939006|gb|ABW83928.1| NADH dehydrogenase subunit 6 [Hippospongia lachne]
Length = 169
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 12/175 (6%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F YL S ++S+ +V+ ++ +Y+V SL+ AF+N AGLF++LG EF+A + L+VY
Sbjct: 1 MYLFFCYLLSVGIMLSAVMVICSKSSVYAVLSLVSAFLNVAGLFVVLGVEFIAFLLLLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V FLF++M+L ++ + + K + + F L +
Sbjct: 61 VGAIMVLFLFVLMILMLNEDELQGEKSKLVVFVFLFVFLFLFCFKIG--------QVTFP 112
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM----LRHRRDIKR 173
+ +G+ LY +Y ILLL+MIG + L+ +KR
Sbjct: 113 NWGANERGIVLLGRGLYIEYGEGFIAGSLILLLAMIGVVELVGDLIWESNSGVKR 167
>gi|167752194|ref|ZP_02424321.1| hypothetical protein ALIPUT_00436 [Alistipes putredinis DSM 17216]
gi|167660435|gb|EDS04565.1| hypothetical protein ALIPUT_00436 [Alistipes putredinis DSM 17216]
Length = 169
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 8/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + S+ L VT + + + L+F AG++ L F+ + L++
Sbjct: 4 TLDLIVFTVLAVFTLASAVLAVTTKRILRAATFLLFVLFGTAGIYFQLNYSFLGAVQLLI 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + V ++F I++ + + AE + F +GILA + F+ +
Sbjct: 64 YAGGITVLYVFSILLTSSEGDKAEKLRGYKF----VVGILATLAGLAICLFVTLRHQFLP 119
Query: 122 SRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
V IG L + Y P E+ +LL ++G I++ +
Sbjct: 120 EHFEHGELAVREIGFALMSPEKQGYLLPFEVISLLLLACIVGGILIARKR 169
>gi|294507450|ref|YP_003571508.1| NADH dehydrogenase I, J subunit [Salinibacter ruber M8]
gi|294343778|emb|CBH24556.1| NADH dehydrogenase I, J subunit [Salinibacter ruber M8]
Length = 169
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ F+L + +A+ ++ ++ RNP+ S L+ AGL+L L A F+ +I ++V
Sbjct: 1 MAAPSMFFLLATVAVAAALGMIIARNPVSSALWLVLNLFCIAGLYLTLNASFIGVIQILV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG-ILAAELIVCASNFMVFSAEGE 120
Y GA++V FLF+IM+L++ + +G F +G +L ++L+ + +
Sbjct: 61 YAGAIMVLFLFVIMLLNLSALPELEEIEWASIGGFAVGLVLLSQLLYVVALQFELGVDPI 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + ++G++L+T+YA L+++G +LL + +GA++L R
Sbjct: 121 GAEAAAEAGSAASLGEILFTRYALHLQVAGILLLAATVGAVLLAQRR 167
>gi|197116571|ref|YP_002136998.1| NADH dehydrogenase I subunit J [Geobacter bemidjiensis Bem]
gi|197085931|gb|ACH37202.1| NADH dehydrogenase I, J subunit [Geobacter bemidjiensis Bem]
Length = 160
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ FY+ + + +I + +T R + ++ L+ +F A +F LLGA FVA + +++Y
Sbjct: 1 MERTIFYILAAVTVIGTLCAITARQAVRAIVYLVTSFFALALIFYLLGAPFVAALEVIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF+IMM+++ + ++V ++ V
Sbjct: 61 AGAIMVLFLFVIMMVEVASPEKLAKPAFSDWW-----PALVLVLVVVASLTVLVTGQAPP 115
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V +VL+T+Y +E+ LL +++GA+ L R
Sbjct: 116 VPGAGAQTVRQFSQVLFTRYGVAIELVSMQLLFALVGALYLGRRR 160
>gi|296040755|gb|ADG85345.1| NADH dehydrogenase subunit 6 [Silene paradoxa]
Length = 157
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+A++S +VV +NP++SV I F N +GL LLLG +F AMI LVVY+GA+ V FLF+
Sbjct: 1 LALVSGLMVVRAKNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIFLVVYIGAIAVLFLFV 60
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELS 122
+MM I I R S IG++ + +
Sbjct: 61 VMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLRYTVYA 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
V N+E +G +LYT Y +S ILL++MIG
Sbjct: 121 GKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIG 157
>gi|11466441|ref|NP_038447.1| NADH dehydrogenase subunit 6 [Mesostigma viride]
gi|14194990|sp|Q9MUL3|NU6C_MESVI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|7259584|gb|AAF43885.1|AF166114_97 subunit 6 of NADH-plastoquinoneoxidoreductase [Mesostigma viride]
Length = 189
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+Q+L L II + VV + N +YS F L + AG++LLL AEF+A +++Y
Sbjct: 7 IQNLSLLLLEIGTIIGALGVVLLPNILYSGFLLGGVLICIAGIYLLLNAEFIAAAQVLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF IM+++ + + G + + M+F + +
Sbjct: 67 VGAINVIILFAIMLVNKIENLNPSNNQMMRNG---LSSFICFSFFILLSNMIFDTQWIDT 123
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V ++ IG +++ + P EI +LL++++GA+ + +
Sbjct: 124 VGVSTKYSISIIGNHIFSDFLLPFEIVSVLLLVTLVGAVFIARKE 168
>gi|164565466|ref|YP_001649183.1| NADH dehydrogenase subunit 6 [Seriatopora hystrix]
gi|164565480|ref|YP_001649196.1| NADH dehydrogenase subunit 6 [Seriatopora caliendrum]
gi|148669052|gb|ABR01610.1| NADH dehydrogenase subunit 6 [Seriatopora hystrix]
gi|148669076|gb|ABR01623.1| NADH dehydrogenase subunit 6 [Seriatopora caliendrum]
Length = 187
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
F + F I S +VV+ NP+ S+F L+ F+N+A FLLLG +F+A++ L++YVG
Sbjct: 2 EFFSFFFILGIIGSGVMVVSALNPVLSIFWLVLVFINSAVFFLLLGIDFLALMFLLIYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI--------VCASNFMVFS 116
A+ + FLF+IM+L++ +++ IG + + +F + +
Sbjct: 62 AIAILFLFVIMLLNLTDYPPVLKREVDMTNYIPIGFIIGIFFFSEIASSGLFLGSFQIEN 121
Query: 117 AEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDI 176
+ + +N+E +G++LY L ++ FILL++MIG IVL K+QD+
Sbjct: 122 WDLSFPWFLISYHNIEALGQILYVSGFCLLLLASFILLVAMIGVIVLTQETEFLSKKQDL 181
Query: 177 SKQLES 182
Q+
Sbjct: 182 FFQINR 187
>gi|323698258|ref|ZP_08110170.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
sp. ND132]
gi|323458190|gb|EGB14055.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
desulfuricans ND132]
Length = 174
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
V+ + F +++ + + + L V+ + + ++ LI + AG++LLL F+A + L++
Sbjct: 3 VLAKIAFGVYTLVILGGAVLAVSSSSLVRALIGLITTLIGVAGMYLLLATPFMAFMQLLI 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V F +M+ + E K ++ LAA + A +
Sbjct: 63 YVGAVSVLIFFAVMLTRAEQGGDEADKA---PMKRYVFGLAATMAPAAILGWLVLTRPAP 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
S V ++ +G+ L Y P E+ IL+++M GA++L+ R
Sbjct: 120 SVAVPVEVPIKQLGEGLLGSYFLPFELISVILMVAMSGAVLLVWEKR 166
>gi|306486044|gb|ADM92669.1| NADH-plastoquinone oxidoreductase subunit 6 [Franklinia alatamaha]
Length = 158
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/157 (26%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
I+SS V+ NPIYS FSL FV + ++L + FVA L++YVGA+ V +F +
Sbjct: 1 LILSSLGVILFPNPIYSAFSLGLVFVCISFFYILSNSHFVAAAQLLIYVGAINVLIIFAV 60
Query: 75 MMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
M ++ + G I + + S + + + +
Sbjct: 61 MFMNGSEYYKDFHLWTVGDGITSMVCTSIFVSLITTILDTSWYGIIWATKSNQILEQDLI 120
Query: 132 ---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ IG L T + P E+ ILL+++IGAI +
Sbjct: 121 SNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 157
>gi|326799614|ref|YP_004317433.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Sphingobacterium sp. 21]
gi|326550378|gb|ADZ78763.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Sphingobacterium sp. 21]
Length = 183
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + L FY+ +F A+ S+ L+V+++N + S+F AGL++ A+FVA+ ++
Sbjct: 1 MNINLLLFYVLAFTAVGSAILIVSMKNLVRSLFLFFVTLFAVAGLYVFALADFVAVTQVI 60
Query: 61 VYVGAVIVFFLFIIMMLD-IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VYVG V+V LF M+ + + + + K F + + + + +V+
Sbjct: 61 VYVGGVLVLMLFAFMLSNKVLLNDLQSGFKGVFSIPSWQAGMVSLALFTVLLTVVWQVAT 120
Query: 120 ELSRLVFK-----------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ + N + ++G L T++ P E+ L+++++GA L + +
Sbjct: 121 NQPQWITDAKEKQLLIQHHDNTIHHLGINLMTRFILPFEVVSIFLMMALMGAAHLARKEK 180
Query: 169 R 169
R
Sbjct: 181 R 181
>gi|290790821|gb|ADD63078.1| NADH-plastoquinone oxidoreductase subunit 6 [Potamophila
parviflora]
Length = 176
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + ++LL + FVA+ L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYILLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I I + + S + + NNV+ IG L
Sbjct: 90 KNFWTIGDGFTSLVCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELISIILLVSLIGAITMAR 175
>gi|194333681|ref|YP_002015541.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Prosthecochloris aestuarii DSM 271]
gi|194311499|gb|ACF45894.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Prosthecochloris aestuarii DSM 271]
Length = 173
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ FYLF+ + + S+ VV +N IYS FSL+F F A L++ L A+F+A+ +VVYVG
Sbjct: 7 TIIFYLFAAITVFSAAFVVFSKNVIYSAFSLLFTFFGVAALYVYLSADFIAVTQIVVYVG 66
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V LF +M + + + + + I ++ A + +
Sbjct: 67 GILVLLLFGVMFTNKIMTTSLRTEVVNLIPGIAILFAVTGGLLYV---FYTRANWYSTGV 123
Query: 125 VFKGNNVENIGKVLYTQYAYPLEI 148
+G+ VE IG ++Y P E+
Sbjct: 124 QLQGSVVERIGLETMSRYVLPFEM 147
>gi|282891841|ref|ZP_06300321.1| hypothetical protein pah_c198o032 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498274|gb|EFB40613.1| hypothetical protein pah_c198o032 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 168
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++F + I+SS V++ R PIY+ S + + AGL+ L A+F+A++ ++VY GA++V
Sbjct: 10 WVFGTILILSSLGVISSRKPIYASLSFLMTLLALAGLYQQLSAQFIAVMQVLVYAGAILV 69
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F+F+I++ D K L F + +
Sbjct: 70 IFMFVIVLFQ-DAHEKIALFKAKSSPPLLFAAGGLFLFTMLFLSERFYNLKTSNGPSEEF 128
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
VE +GK LY + +P E + L+++IGA+ + +
Sbjct: 129 GTVETLGKALYADFFFPFEAVTLLFLIAVIGAVFIARK 166
>gi|296040757|gb|ADG85346.1| NADH dehydrogenase subunit 6 [Silene vulgaris]
Length = 157
Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 11/157 (7%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+A++S +VV +NP++SV I F N +GL LLLG +F AMI LVVY+GA+ V FLF+
Sbjct: 1 LALVSGLMVVRAKNPVHSVLFFILVFCNTSGLLLLLGLDFFAMIFLVVYIGAIAVLFLFV 60
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELS 122
+MM I I R S IG++ + +
Sbjct: 61 VMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYA 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
V N+E +G +LYT Y +S ILL++MIG
Sbjct: 121 GKVRSWTNLETLGNLLYTYYFVWFLVSSLILLVAMIG 157
>gi|283852193|ref|ZP_06369466.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
sp. FW1012B]
gi|283572419|gb|EFC20406.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
sp. FW1012B]
Length = 171
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 3/168 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F ++ + + L V + + ++ L+ + AGL+LLL A+FVA++ ++
Sbjct: 4 MYLGQFAFAFYTLIILAGGLLAVGAQGLVRAMLGLVVSLFGVAGLYLLLLADFVALMQIL 63
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGAV + F IM+ + E G + + + A L+ + G
Sbjct: 64 IYVGAVTILMFFAIMLTRASADGGEAE---GPGFAGILRAIPAFLVPAGILVPFLAVHGT 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
K + + +G L Y P E+ +LL +M GA++L R
Sbjct: 121 PGFATPKNVSPDQLGAGLLGPYTLPFELISVVLLAAMAGAVLLAFEKR 168
>gi|290489864|gb|ADD31339.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Bulnesia
arborea]
Length = 176
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ S VV N +YS FSL + L++ + FVA L++Y
Sbjct: 7 IHDFILVFLGSGLILGSLGVVLFSNSMYSAFSLGLVLFCISLLYISSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPR---KKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I I + +
Sbjct: 67 VGAINVLIIFAVMFMNNSEYSKNFNILTFRNGITSLVCISIFFSLVTTILDTSWYSIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + NN + IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TRSNHIIEQELINNSQQIGIHLSTDFFLPFELISIILLVSLIGAIAMAR 175
>gi|122894040|ref|YP_001004236.1| NADH-plastoquinone oxidoreductase subunit 6 [Ranunculus macranthus]
gi|221272343|sp|A1XGT8|NU6C_RANMC RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|85540854|gb|ABC70806.1| NADH-plastoquinone oxidoreductase subunit 6 [Ranunculus macranthus]
Length = 177
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPI+S FSL V + + + FVA L++Y
Sbjct: 7 IHDFLLVFLGLGFIMGGLGVVLLTNPIFSAFSLGLVLVCTSLFYTPSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ ++ G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYSDFHLWTVGDGVTSLVCTSIFVSLITTIPDTSWYGIVWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLINNSQQIGIHLSTDFFLPFELISIILLVALIGAISMAR 175
>gi|317046224|ref|YP_004072513.1| NADH dehydrogenase subunit 6 [Corynocarpus laevigata]
gi|309252941|gb|ADO60361.1| NADH dehydrogenase subunit 6 [Corynocarpus laevigata]
Length = 176
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ F I+ VV + N IYS FSL V A ++L + FVA L++Y
Sbjct: 7 IHDFLLVFFGSGIILGGMGVVLLTNSIYSAFSLGLVLVCIALFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG---SFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M + + G I + +
Sbjct: 67 VGAINVLIIFAVMFMKGSEYSKDFPLWTVGSGVTLLVCTSIFVSLINTILDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|330944408|gb|EGH46423.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
pisi str. 1704B]
Length = 169
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A +S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAFVSTLRVITNTNPVHALLYLIISLIAVAITFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G +IG + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPVSVQQERAWLKPG-IWIGPVILGALLLAELLYVLFANPTGAGV 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + I A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAITAFHLGRNEAKE 166
>gi|300727162|ref|ZP_07060580.1| NADH dehydrogenase I, subunit 6 [Prevotella bryantii B14]
gi|299775548|gb|EFI72140.1| NADH dehydrogenase I, subunit 6 [Prevotella bryantii B14]
Length = 173
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + + S+ + V + + + L+F AG++ LL F+ L +
Sbjct: 1 MANLVVFCILAVVILGSAIMCVMTKRIMRAATFLLFVLFGIAGIYFLLDYTFLGAAQLSI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + + ++F I ++ + +G I + + +
Sbjct: 61 YAGGITMMYIFAIQLVSKRTLQGLVEQIKGSRMINGILVAVLGIATVGVVLLKNKFIDCA 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+++ K +++ IG L QY P E LL +IG I++ + +
Sbjct: 121 AQMADKEVSMDVIGNHLLGSEKYQYVLPFEFISVFLLACIIGGIMIARKEDKK 173
>gi|325610491|gb|ADZ36442.1| NADH dehydrogenase subunit 6 [Polyspora chrysandra]
Length = 176
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 65/154 (42%), Gaps = 6/154 (3%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
S V+ NPI S FSL FV + ++L + FVA L++YVGA+ V +F +M +
Sbjct: 22 GSLGVILFPNPISSAFSLGLVFVCISFFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFM 81
Query: 78 DIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV--- 131
+ + G I + + S + + + +
Sbjct: 82 NDSEYYKDFHLWTVGDGITSMVCTSIFVSLISTILDTSWYGIIWATKSNQILEQDLISNS 141
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ IG L T + P E+ ILL+++IGAI +
Sbjct: 142 QQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|167034695|ref|YP_001669926.1| NADH dehydrogenase subunit J [Pseudomonas putida GB-1]
gi|166861183|gb|ABY99590.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pseudomonas
putida GB-1]
Length = 166
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ VVT NP++++ LI + ++ A +F LGA F + ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVVTGTNPVHALLYLIISLISVAMIFFSLGAPFAGALEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + G + ++ L++ +++F + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVAQERGWLKPGIWAGPVILGTLLLAELLYVLFVTP-SGAGI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 SGTTVGPKEVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|229007601|ref|ZP_04165196.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus mycoides
Rock1-4]
gi|228753739|gb|EEM03182.1| NADH dehydrogenase (Ubiquinone), J subunit [Bacillus mycoides
Rock1-4]
Length = 146
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 29 IYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRK 88
++ + +L+F F++ AGL+ LL AEFV + +++Y GA+ + +F IM+ D E
Sbjct: 1 MHMMLALVFTFLSIAGLYFLLLAEFVGVAQILIYSGAITIIMIFGIMLTKHDA-ENESSF 59
Query: 89 KRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEI 148
FF ++ ++ A N + F+ + N IG +LY++Y P E+
Sbjct: 60 SFRKWLIFFAVVVFGGVMYFAVNNIDFTNRSVQGSVPLHEQNTLQIGTLLYSKYVIPFEL 119
Query: 149 SGFILLLSMIGAIVLMLRHRRD 170
+ ILL++++GAIVL + ++
Sbjct: 120 TSVILLVALVGAIVLAKKDEKE 141
>gi|15597841|ref|NP_251335.1| NADH dehydrogenase subunit J [Pseudomonas aeruginosa PAO1]
gi|107102165|ref|ZP_01366083.1| hypothetical protein PaerPA_01003215 [Pseudomonas aeruginosa PACS2]
gi|116050632|ref|YP_790549.1| NADH dehydrogenase subunit J [Pseudomonas aeruginosa UCBPP-PA14]
gi|152984819|ref|YP_001347925.1| NADH dehydrogenase subunit J [Pseudomonas aeruginosa PA7]
gi|218891194|ref|YP_002440060.1| NADH dehydrogenase subunit J [Pseudomonas aeruginosa LESB58]
gi|254235627|ref|ZP_04928950.1| NADH dehydrogenase I chain J [Pseudomonas aeruginosa C3719]
gi|254241075|ref|ZP_04934397.1| NADH dehydrogenase I chain J [Pseudomonas aeruginosa 2192]
gi|313107684|ref|ZP_07793866.1| NADH dehydrogenase I chain J [Pseudomonas aeruginosa 39016]
gi|81622298|sp|Q9I0J3|NUOJ_PSEAE RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|9948714|gb|AAG06033.1|AE004693_4 NADH dehydrogenase I chain J [Pseudomonas aeruginosa PAO1]
gi|115585853|gb|ABJ11868.1| NADH dehydrogenase I chain J [Pseudomonas aeruginosa UCBPP-PA14]
gi|126167558|gb|EAZ53069.1| NADH dehydrogenase I chain J [Pseudomonas aeruginosa C3719]
gi|126194453|gb|EAZ58516.1| NADH dehydrogenase I chain J [Pseudomonas aeruginosa 2192]
gi|150959977|gb|ABR82002.1| NADH dehydrogenase I chain J [Pseudomonas aeruginosa PA7]
gi|218771419|emb|CAW27186.1| NADH dehydrogenase I chain J [Pseudomonas aeruginosa LESB58]
gi|310880368|gb|EFQ38962.1| NADH dehydrogenase I chain J [Pseudomonas aeruginosa 39016]
Length = 166
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + +A++++ V+T NP++++ LI + + + F LGA F + ++VY G
Sbjct: 2 EFAFYFAAGVAVLATLRVITNSNPVHALLYLIISLLAISMTFFSLGAPFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E +K G ++G A L++ +V + + +
Sbjct: 62 AIMVLFVFVVMMLNLGPAVVEQERKWLTPG-IWVGPSALALVLLVELLVVLARTPSGAGI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLE 147
+ + +G LY Y +E
Sbjct: 121 GHTTVDAKAVGISLYGPYLLVVE 143
>gi|51892733|ref|YP_075424.1| NADH dehydrogenase I subunit J [Symbiobacterium thermophilum IAM
14863]
gi|51856422|dbj|BAD40580.1| NADH dehydrogenase I subunit J [Symbiobacterium thermophilum IAM
14863]
Length = 168
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 86/164 (52%), Gaps = 2/164 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + MA+ V+ + P+Y V S +FAF+ A L+L L +EF+A+I L+VY GA+
Sbjct: 4 LFIIAGLMAVAGVLGVILAKPPVYQVMSTVFAFLGLAALYLSLQSEFLAVIQLIVYGGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG--ELSRL 124
++ FLF+I +L + E + + L+V + +F EG +++
Sbjct: 64 MILFLFVITLLTARRDPVEKDAGQLTRPKLIGYAVGGALLVMLAIVGLFGGEGRIGWTQV 123
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
V+ G L T +P EI FIL++++IG ++L+ RHR
Sbjct: 124 PADFGQVKAFGYELLTTNVFPFEILAFILMVAVIGVMLLVGRHR 167
>gi|154148356|ref|YP_001405798.1| NADH dehydrogenase subunit J [Campylobacter hominis ATCC BAA-381]
gi|153804365|gb|ABS51372.1| NADH-quinone oxidoreductase, j subunit [Campylobacter hominis ATCC
BAA-381]
Length = 175
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 95/170 (55%), Gaps = 3/170 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + FY FS +++ + V +N +Y++ +L + +GLF LGAEF+ ++ ++V
Sbjct: 1 MFEIISFYFFSVLSLGLFAVSVFSKNVLYAMSALAGGMIFISGLFFTLGAEFLGVVQIMV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAVIV + F +M + + +V E ++ + + +++A L+V + S +
Sbjct: 61 YTGAVIVLYGFSMMFFNANKDVKEAKENKIIYS---LAVISAFLLVMIFVAPILSDKISA 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
++ + +N+E IG V++T+Y E+ +LL++MI IVL+ ++
Sbjct: 118 YPIIKELDNIEAIGLVIFTKYLIVFELVAIMLLVAMICGIVLVHKNMDKS 167
>gi|313498023|gb|ADR59389.1| NADH dehydrogenase subunit J [Pseudomonas putida BIRD-1]
Length = 166
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ VVT NP++++ LI + ++ A +F LGA F + ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVVTGTNPVHALLYLIISLISVAMIFFALGAPFAGALEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + G + G + ++ A V + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVAQERGWLKPG-IWAGPVILGALLLAELLYVLFVTPSGAGI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 SGTTVGPKEVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|170721049|ref|YP_001748737.1| NADH dehydrogenase subunit J [Pseudomonas putida W619]
gi|169759052|gb|ACA72368.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pseudomonas
putida W619]
Length = 166
Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ VVT NP++++ LI + ++ A +F LGA F + ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVVTGTNPVHALLYLIISLISVAMIFFALGAPFAGALEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + G + G + ++ V + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVAQERGWLKPG-IWAGPVILGTLLLLELLYVLFVTPSGAGI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 SGTTVGPKEVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|328952914|ref|YP_004370248.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfobacca
acetoxidans DSM 11109]
gi|328453238|gb|AEB09067.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfobacca
acetoxidans DSM 11109]
Length = 173
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ +L F + + + V RN ++V L + AG+F+ L + F+AM+ +++Y
Sbjct: 7 LSNLSFLGVLAVTFGGAIIAVGARNIFHNVLGLALSLFGVAGIFVYLNSPFLAMMEILIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ + F IM+ + PRK G+ L A ++ + ++ + +
Sbjct: 67 VGAICIAICFAIMLSEPLYLPKPPRKPLKIAGAG----LGAGVVFLMLSLLIKKTDWIPA 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ ++ IG L T+YA E+ +LL++M+GAIV R
Sbjct: 123 SVRGDDWSIATIGHYLLTRYALIFEVISLVLLVAMLGAIVNARNGRNR 170
>gi|296388894|ref|ZP_06878369.1| NADH dehydrogenase subunit J [Pseudomonas aeruginosa PAb1]
Length = 166
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + +A++++ V+T NP++++ LI + + + F LGA F + ++VY G
Sbjct: 2 EFAFYFAAGVAVLATLRVITNSNPVHALLYLIISLLAISMTFFSLGAPFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E +K G ++G A L++ +V + + +
Sbjct: 62 AIMVLFVFVVMMLNLGPAVVEQERKWLTPG-IWVGPSALALVLLVELLVVLARTPSGAGI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLE 147
+ + +G LY Y +E
Sbjct: 121 GHTTIDAKAVGISLYGPYLLVVE 143
>gi|321401341|gb|ADW83096.1| NADH dehydrogenase subunit 6 [Pavlova lutheri]
Length = 212
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 108/207 (52%), Gaps = 21/207 (10%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
SL +LFS A++SS +V+T NP++SVF+LIF FVN A + L+L EF++++ LVVYVG
Sbjct: 6 SLIIFLFSSFALVSSAVVITATNPVHSVFALIFVFVNVASVLLVLRVEFISLLFLVVYVG 65
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL--- 121
AV V FLF+IMML++ + A +G+L + + G
Sbjct: 66 AVAVLFLFVIMMLNVKLNEASDNSVSYLPLGLVLGVLFLLEVSLIITGDLLPFSGGFLYR 125
Query: 122 ------------------SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVL 163
+V NN++ IG V+YT +P ++G +LLLSMIGAIVL
Sbjct: 126 SEISQNLFAGSPFSHLHLESVVAVPNNMQLIGSVVYTDLFFPFILAGLLLLLSMIGAIVL 185
Query: 164 MLRHRRDIKRQDISKQLESNPDNSIVM 190
L +QDI KQ+ SI +
Sbjct: 186 SLMKTSSALKQDIFKQVSVLAFESIRV 212
>gi|161527790|ref|YP_001581616.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Nitrosopumilus maritimus SCM1]
gi|160339091|gb|ABX12178.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Nitrosopumilus maritimus SCM1]
Length = 170
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F + + I S+ + +R+ +Y +L+ AG F LL A FVA+ L VY
Sbjct: 1 MADAAFLALTVITIGSAIAALELRSLVYGSIALMGTLGGIAGFFFLLDAPFVALFQLAVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VG++ V LF +M++ ++ + KR GI +I+ A + + +
Sbjct: 61 VGSIAVLILFTVMLVKRELIFKKIEDKRRKFA----GIGLMLVIMVALGAVFLDSGIKTI 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +IG T Y L + G IL S+ GA+VL R
Sbjct: 117 TTDEPPVDFRDIGTDFVTYYWPALILMGLILAGSVTGALVLAKRE 161
>gi|303247485|ref|ZP_07333757.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
fructosovorans JJ]
gi|302491181|gb|EFL51073.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
fructosovorans JJ]
Length = 171
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 3/169 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F ++ + + L VT + + ++ L+ A AGL+LLL A+FVA++ ++
Sbjct: 4 MYLGQFAFAFYTLIVLAGGGLAVTAASLVRAMLGLVVALFGVAGLYLLLLADFVALMQIL 63
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGAV V F IM+ + E G + + + A L+ + + G
Sbjct: 64 IYVGAVTVLIFFAIMLTRAAADGGEAE---GPGAAGILRAIPAFLVPAGILVPLLAVYGA 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ K + + +G L Y E+ +LL +M GA++L R
Sbjct: 121 VGFPTPKNVSPDQLGAGLLGPYTLAFELISVVLLAAMAGAVILAFEKRE 169
>gi|164421194|ref|YP_001648691.1| NADH dehydrogenase subunit 6 [Vaceletia sp. GW948]
gi|158939052|gb|ABW83971.1| NADH dehydrogenase subunit 6 [Vaceletia sp. GW948]
Length = 171
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+L YL S ++S+ +V+ ++ +Y+V SL+ AF+N AGLF++LG EF+A + L+VYVG
Sbjct: 2 NLICYLLSVGTMLSAVMVICSKSSVYAVLSLVSAFLNVAGLFVVLGVEFLAFLLLLVYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V FLF++M+L ++ + + K + + F +
Sbjct: 62 AIMVLFLFVLMILMLNEDEWQGEKSKFVVFVFLFFFFFLFCFKIG--------QVTFPNW 113
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVL 163
+ +G+ LY +Y ILLL+MIG + L
Sbjct: 114 GVNERGIVLLGRGLYIEYGRGFIAGSLILLLAMIGVVEL 152
>gi|170784789|ref|YP_001718705.1| NADH-plastoquinone oxidoreductase subunit 6 [Trachelium caeruleum]
gi|170784796|ref|YP_001718712.1| NADH-plastoquinone oxidoreductase subunit 6 [Trachelium caeruleum]
gi|221272393|sp|A9QC80|NU6C_TRACE RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|156598841|gb|ABU85673.1| NADH-plastoquinone oxidoreductase subunit 6 [Trachelium caeruleum]
gi|157267537|gb|ABV26530.1| NADH-plastoquinone oxidoreductase subunit 6 [Trachelium caeruleum]
gi|157267544|gb|ABV26537.1| NADH-plastoquinone oxidoreductase subunit 6 [Trachelium caeruleum]
Length = 176
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV + NPIYS FSL V + L++L + F+A L++Y
Sbjct: 7 IHDFILVFLGLVLILGGLAVVLLPNPIYSAFSLGLVLVCISLLYILSNSHFLAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M L+ + G + A+ +
Sbjct: 67 VGAINVLIIFAVMFLNGSEYYKDLNPWTVGDGVTSVVCTSLFASLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQIIEQDLINNSQEIGIHLSTDFLIPFELISIILLVALIGAIAVAR 175
>gi|13518395|ref|NP_084754.1| NADH dehydrogenase subunit 6 [Oenothera elata subsp. hookeri]
gi|169142762|ref|YP_001687189.1| NADH dehydrogenase subunit 6 [Oenothera argillicola]
gi|169142912|ref|YP_001687335.1| NADH dehydrogenase subunit 6 [Oenothera glazioviana]
gi|169142997|ref|YP_001687419.1| NADH dehydrogenase subunit 6 [Oenothera biennis]
gi|169143083|ref|YP_001687503.1| NADH dehydrogenase subunit 6 [Oenothera parviflora]
gi|22256938|sp|Q9MTH9|NU6C_OENEH RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|221272335|sp|B0Z4S8|NU6C_OENAR RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|221272336|sp|B0Z512|NU6C_OENBI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|221272337|sp|B0Z596|NU6C_OENGL RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|221272338|sp|B0Z5I0|NU6C_OENPA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|6723812|emb|CAB67223.1| NADH dehydrogenase subunit 6 [Oenothera elata subsp. hookeri]
gi|159793000|gb|ABW98756.1| NADH dehydrogenase subunit 6 [Oenothera argillicola]
gi|159793170|gb|ABW98924.1| NADH dehydrogenase subunit 6 [Oenothera biennis]
gi|159895524|gb|ABX10089.1| NADH dehydrogenase subunit 6 [Oenothera glazioviana]
gi|159895609|gb|ABX10173.1| NADH dehydrogenase subunit 6 [Oenothera parviflora]
Length = 176
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPI+S FSL V + F L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLIVGGLGVVLLTNPIFSAFSLGLVLVCISLFFSLSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF +M ++ + G + + + + + +
Sbjct: 67 VGAINVLILFAVMFMNGSEYSKDLTLWTVGDGITSLVCTSIFISLITTILDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ N + IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TKSNQIIEQDLIGNSQQIGIHLSTDFFLPFELISIILLVSLIGAIAVAR 175
>gi|289065142|ref|YP_003434028.1| NADH-plastoquinone oxidoreductase subunit 6 [Typha latifolia]
gi|281371825|gb|ADA63752.1| NADH-plastoquinone oxidoreductase subunit 6 [Typha latifolia]
Length = 176
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + ++L A FVA L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYILSNAYFVAAAQLLIYVGAINVLIIFAVMFMNGSEYSKD 89
Query: 86 PRKKRGFLGS---FFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
G IL + + S + + NNV+ IG L
Sbjct: 90 SYLWTIGDGGTSLICTTILFSLITTIPDTSWYGIIWTTKSNQIIEQDLINNVQQIGIHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELVSIILLVSLIGAITMAR 175
>gi|104782529|ref|YP_609027.1| NADH dehydrogenase subunit J [Pseudomonas entomophila L48]
gi|95111516|emb|CAK16236.1| NADH dehydrogenase I chain J [Pseudomonas entomophila L48]
Length = 166
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 84/166 (50%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ VVT NP++++ LI + ++ A +F LGA F + ++ Y G
Sbjct: 2 EFAFYFASGVAVVSTLRVVTGTNPVHALLYLIISLISVAMIFFSLGAPFAGALEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + G + ++ A L++ +++F + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVAQERGWLKPGIWAGPVILAALLLLELLYVLFVTP-SGAAI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 SGTTVDAKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|150406472|ref|YP_001315115.1| NADH dehydrogenase subunit 6 [Chlorokybus atmophyticus]
gi|126507709|gb|ABO15106.1| NADH dehydrogenase subunit 6 [Chlorokybus atmophyticus]
Length = 259
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/147 (30%), Positives = 69/147 (46%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F +FS +A+IS +V+ +NP++SV LI F + +GL LLLG +F AM+ LV
Sbjct: 1 MTAEQTLFSIFSSVALISGIMVIRAKNPVHSVLFLILVFCSTSGLLLLLGLDFFAMVFLV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGA+ V FLF++MML+I + R IG + ++ + +
Sbjct: 61 VYVGAIAVLFLFVVMMLNIKMAEITENLLRYLPVGGLIGFIFVFEVLLVVDNDLIPLLSI 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLE 147
I + Q L
Sbjct: 121 TKPRASLLTEYFQIYSTFFFQSFIALI 147
>gi|139387497|ref|YP_001122850.1| NADH-plastoquinone oxidoreductase subunit 6 [Phaseolus vulgaris]
gi|221272341|sp|A4GGE9|NU6C_PHAVU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|112031019|gb|ABH88131.1| NADH-plastoquinone oxidoreductase subunit 6 [Phaseolus vulgaris]
gi|158187182|gb|ABW22815.1| NADH-plastoquinone oxidoreductase subunit 6 [Phaseolus vulgaris]
Length = 176
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 6/170 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ I+ S VV N I+S FSL V + ++L + FVA L++
Sbjct: 6 SLHDFILVFLGSGLILGSLGVVFFTNTIFSAFSLGLVLVCVSLFYILSNSHFVAASQLLI 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ V +F +M ++ R G + + + +
Sbjct: 66 YVGAINVLIIFAVMFMNGSEYDQNFRVWTVGDGITLMVCTSIFISQINTILDTSWHGIIW 125
Query: 122 SRLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 126 TTRPNQILEQDLISTSQQIGIHLSTDFFLPFELISIILLVALIGAIFVAR 175
>gi|325277469|ref|ZP_08143075.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas sp. TJI-51]
gi|324097398|gb|EGB95638.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas sp. TJI-51]
Length = 166
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ VVT NP++++ LI + ++ A +F LGA F + ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVVTGTNPVHALLYLIISLISVAMIFFSLGAPFAGALEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + G + ++ L++ +++F + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVAQERGWLKPGIWAGPVILGALLLAELLYVLFVTP-SGAGI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 SGTTVGPKAVGVSLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|222054370|ref|YP_002536732.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
FRC-32]
gi|221563659|gb|ACM19631.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Geobacter sp.
FRC-32]
Length = 161
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 84/165 (50%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ FY+ + + ++++ +T ++ ++++ L+ +F A +F LL A VA+ +++Y
Sbjct: 1 MEQALFYILAAVTVVATIFAITEKHAVHAIVYLVTSFFALAVIFFLLSAPLVAVFEVIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F+IMMLD+ + P K + + + I+ A+ + A +
Sbjct: 61 AGAIMVLFMFVIMMLDL----SHPEKIGLPRFAHWWPAILLGGIILAAFITLVMARQQAV 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + L+ +Y +EI LL +++GA+ L R
Sbjct: 117 PGEVAEIGIRDFSRTLFQKYGIAVEIISMQLLFALVGALYLGRRR 161
>gi|194033199|ref|YP_002000538.1| NADH dehydrogenase subunit 6 [Brachypodium distachyon]
gi|221272311|sp|B3TNA2|NU6C_BRADI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|193075607|gb|ACF08690.1| NADH dehydrogenase subunit 6 [Brachypodium distachyon]
Length = 176
Score = 78.1 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + + LL + FVA+ L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I I+ + + S + + NNV+ IG L
Sbjct: 90 KNSWTIGDGFTSLVCITIVFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELISIILLVSLIGAITMAR 175
>gi|319901161|ref|YP_004160889.1| NADH dehydrogenase subunit J [Bacteroides helcogenes P 36-108]
gi|319416192|gb|ADV43303.1| NADH dehydrogenase subunit J [Bacteroides helcogenes P 36-108]
Length = 170
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++ FY + + S L VT + S L+F AG++ LLG F+ + ++V
Sbjct: 4 TLETVVFYFLAAFITVFSILTVTTHRMVRSATYLLFVLFGTAGIYFLLGYTFLGSVQVMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ + +VA K+ FL A +++ + +
Sbjct: 64 YAGGIVVLYVFSILLTSGEGDVAAKLKRSKFLAGLGATAGGAVIVLFIT---LNHKFIAT 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + N+ IG + + Y P E +LL ++G I++ +
Sbjct: 121 TDVQPLEVNIRTIGHHMLSGEKYGYLLPFEAVSILLLACIVGGILIARKR 170
>gi|330958151|gb|EGH58411.1| NADH:ubiquinone oxidoreductase subunit J [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 169
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVITNTNPLHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G ++G + ++ A V A + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVQQERAWLKPG-IWLGPVILGALLLAELLYVLFANPTGAAV 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + I A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAITAFHLGRNEAKE 166
>gi|62263478|gb|AAX78164.1| unknown protein [synthetic construct]
Length = 202
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 32 VFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRG 91
+ +IF F+ A ++++L ++A++ +VVYVGAV+V FLF++ MLD+ E + + G
Sbjct: 24 MLEMIFTFIFTAAVWIILQQVYLALLLIVVYVGAVLVMFLFVVFMLDL---HVEEQGRVG 80
Query: 92 FLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ-YAYPLEISG 150
++ + ++ + + + ++ IG +++ Y E+
Sbjct: 81 RFFYALAAVVVCAIFATVISYAATNVFAG-AMMQGGVGGLKIIGLTMFSNANLYVFELVD 139
Query: 151 FILLLSMIGAIVLMLR-HRRDIKRQDISKQLESNPDNSIVMVKVKSG 196
FILL +M AI L LR R+ K D ++Q++ + + MVK+ S
Sbjct: 140 FILLAAMTAAITLTLRAKRKGNKTVDPAQQVKVRAKDRLTMVKMPSN 186
>gi|302543402|ref|ZP_07295744.1| putative NADH dehydrogenase subunit [Streptomyces hygroscopicus
ATCC 53653]
gi|302461020|gb|EFL24113.1| putative NADH dehydrogenase subunit [Streptomyces himastatinicus
ATCC 53653]
Length = 186
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 3/169 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++ + VT + +++ L+ A A +LLL AEF+A + +++YVG
Sbjct: 21 EIAFLLVGIATFGAAVITVTTKQLVHAALWLVVALGGIAVEYLLLTAEFIAWVQVLIYVG 80
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + + AA +V + +L +
Sbjct: 81 SVVVLLLFGLMLTKAPIGRSPDADSGNRPAALAVAVAAAAALVWVVVDAFRATWIDLDKG 140
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
V V G+ L+ + P E +LL +++GAIVL R + + KR
Sbjct: 141 VQGSTAVS--GESLFRYWVLPFEALSVLLLAALVGAIVLS-RKKVEEKR 186
>gi|238898692|ref|YP_002924373.1| NADH dehydrogenase I chain J [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466451|gb|ACQ68225.1| NADH dehydrogenase I chain J [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 188
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + ++++++ V+ N I+S+ LI + + + +F LGA + ++VY G
Sbjct: 2 EFSFYTAALVSVLATVRVIFHTNAIHSLLYLIISLLAISVVFFSLGAYLAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + G F++G ++ + F S +
Sbjct: 62 AIMVLFVFVVMMLNLGQSEEKQE-RVGLKPVFWVGPSLLCSLLLLALLKGFHGLSGES-M 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + ++IG L++ Y +E++ +LL ++ A L +++
Sbjct: 120 IGTWVSAKSIGVHLFSAYILAVELASMLLLAGLVVAFHLGKENKKR 165
>gi|70731264|ref|YP_261005.1| NADH dehydrogenase subunit J [Pseudomonas fluorescens Pf-5]
gi|68345563|gb|AAY93169.1| NADH-quinone oxidoreductase, J subunit [Pseudomonas fluorescens
Pf-5]
Length = 166
Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ VVT NP++++ LI + + A F LGA F + ++ Y G
Sbjct: 2 EFAFYFASGVAVVSTLRVVTNTNPVHALLYLIISLIAVAMTFFSLGAPFAGALEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ A+ + G + ++ A L++ +++FS + + +
Sbjct: 62 AIMVLFVFVVMMLNLGPAAAQQERIWLTPGIWIGPVILAALLLAELLYVLFSHQ-SGAGI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 GQTTVSAKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|118475160|ref|YP_891370.1| NADH-quinone oxidoreductase chain j [Campylobacter fetus subsp.
fetus 82-40]
gi|118414386|gb|ABK82806.1| NADH-quinone oxidoreductase chain j [Campylobacter fetus subsp.
fetus 82-40]
Length = 164
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ F FS AI+ S ++ + PI+ SLI V+ AGL+LLL A+ + +I +VVY
Sbjct: 1 MELFLFINFSLFAILGSLGLILFKAPIHGALSLIVTLVSIAGLYLLLFAKTLFLIQIVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V +F++M +I + + K F I+ +I ++ +
Sbjct: 61 AGAIMVLSVFVMMFFNIKSDTLFVKLKPKS----FFVIIPPTVIFAILLDEIWKLPSDFG 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
++ +G L+T + E +L ++IG + ++
Sbjct: 117 IAPLDFGEIKPLGFYLFTNWGLSFEAISLLLTAALIGVVAILKGKN 162
>gi|258514496|ref|YP_003190718.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfotomaculum acetoxidans DSM 771]
gi|257778201|gb|ACV62095.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfotomaculum acetoxidans DSM 771]
Length = 169
Score = 77.8 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ FY+ + + + S+ LVV +N ++SV L +F+ AG +L+L A F+AM+ ++V
Sbjct: 4 IVSIAAFYILAAVTVGSAVLVVAFKNLVHSVLVLAISFLGVAGFYLMLNASFIAMVQILV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV + +F IM+ + S G + A LI + V + E ++
Sbjct: 64 YAGAVCIMVVFGIMLTQQGGMSGSNGFNKQIFAS---GGVVALLIAVIAYLGVNAGEWQI 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
S + V NI ++ ++Y P E++ +LL+++IGA+VL +
Sbjct: 121 SAKQVPHDTVGNIAVLMLSKYMIPFEVAALLLLVALIGAVVLAKEVKAK 169
>gi|261886062|ref|ZP_06010101.1| NADH-quinone oxidoreductase chain j [Campylobacter fetus subsp.
venerealis str. Azul-94]
Length = 164
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ F FS AI+ S ++ + PI+ SLI V+ AGL+LLL A+ + +I +VVY
Sbjct: 1 MELFLFINFSLFAILGSLGLILFKAPIHGALSLIVTLVSIAGLYLLLFAKTLFLIQIVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V +F++M +I + + K F I+ +I ++ + +
Sbjct: 61 AGAIMVLSVFVMMFFNIKSDTLFVKLKPKS----FFVIIPPTVIFAILLDEIWKLPSDFA 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
++ +G L+T + E +L ++IG + ++
Sbjct: 117 IAPLDFGEIQPLGFYLFTNWGLSFEAISLLLTAALIGVVAILKGKN 162
>gi|148925718|ref|ZP_01809406.1| NADH dehydrogenase I chain J [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205355585|ref|ZP_03222355.1| NADH dehydrogenase I chain J [Campylobacter jejuni subsp. jejuni
CG8421]
gi|145845728|gb|EDK22819.1| NADH dehydrogenase I chain J [Campylobacter jejuni subsp. jejuni
CG8486]
gi|205346362|gb|EDZ32995.1| NADH dehydrogenase I chain J [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 172
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 75/171 (43%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++L F FS + + + V +N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIENLAFLFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E K + + + L + +
Sbjct: 61 YSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSAILLLTMLIGFKYQNISTDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AI L + K
Sbjct: 121 LNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAITLTHKELTKEK 171
>gi|126165905|ref|YP_209564.2| NADH dehydrogenase subunit 6 [Huperzia lucidula]
Length = 196
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
I+ S VV N +YS F L + V + L++LL A+FVA + +++YVG + V +F +
Sbjct: 19 VILGSLGVVLFTNIVYSAFLLGWVPVCISFLYILLNADFVAAVQILIYVGTINVLIVFAV 78
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG------ 128
M+++ + G+ + L + A+ ++ L L K
Sbjct: 79 MLINKPQYFRFLKYWTVGDGTALALCTSPFLSIIAAILSTPWSKISLIVLSNKIVEEPLT 138
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVL 163
+NV+ IG T P E+ ILL++ +GAI +
Sbjct: 139 DNVQRIGFHSLTDSPLPFELLSIILLVAPVGAITM 173
>gi|298530614|ref|ZP_07018016.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfonatronospira thiodismutans ASO3-1]
gi|298509988|gb|EFI33892.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfonatronospira thiodismutans ASO3-1]
Length = 174
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 70/158 (44%), Gaps = 3/158 (1%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
+ ++ F+ V ++ + ++ LI AGLF L+ A F+A++ +++YVGAV V F
Sbjct: 19 AIIVVGGFMTVLSQSLVRALVGLIMTLFGVAGLFFLMAAPFIALMQILIYVGAVSVLIFF 78
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
IM+ + + G ++ A L+ S LV + +
Sbjct: 79 AIMLTNA---WPGGDETGRSPGRKYVYAGLAGLVPAVMLATAAIRSAPPSFLVPEETEIS 135
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+G+ + P E+ +L ++M GA++L RR
Sbjct: 136 VLGRFFLEDFILPFELISLLLTIAMAGAVILAFEMRRK 173
>gi|86149418|ref|ZP_01067649.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|85840200|gb|EAQ57458.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
jejuni CF93-6]
Length = 172
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 76/171 (44%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++L F FS + + + V +N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E K + + + L + +
Sbjct: 61 YSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSTILLLAMLIGFKYQNISTDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AIVL + K
Sbjct: 121 LNDPTLFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAIVLTHKELTKEK 171
>gi|153951541|ref|YP_001398852.1| NADH dehydrogenase subunit J [Campylobacter jejuni subsp. doylei
269.97]
gi|152938987|gb|ABS43728.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
doylei 269.97]
Length = 172
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 76/171 (44%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++L F FS + + + V +N +YS+ +L+ V +G + LL AEF+ +I ++V
Sbjct: 1 MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALVGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E K + + + L + +
Sbjct: 61 YSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSAILLLAMLIGFKYQNISTDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AI L + K
Sbjct: 121 LNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAITLTHKELTKEK 171
>gi|57238583|ref|YP_179714.1| NADH dehydrogenase subunit J [Campylobacter jejuni RM1221]
gi|57167387|gb|AAW36166.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni
RM1221]
gi|315059020|gb|ADT73349.1| NADH-ubiquinone oxidoreductase chain J [Campylobacter jejuni subsp.
jejuni S3]
Length = 172
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 76/171 (44%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++L F FS + + + V +N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E K + + + L + +
Sbjct: 61 YSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSAILLLTMLIGFKYQNISTDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AIVL + K
Sbjct: 121 LNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAIVLTHKELTKEK 171
>gi|26990821|ref|NP_746246.1| NADH dehydrogenase subunit J [Pseudomonas putida KT2440]
gi|148546976|ref|YP_001267078.1| NADH dehydrogenase subunit J [Pseudomonas putida F1]
gi|24985828|gb|AAN69710.1|AE016607_4 NADH dehydrogenase I, J subunit [Pseudomonas putida KT2440]
gi|148511034|gb|ABQ77894.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Pseudomonas
putida F1]
Length = 166
Score = 77.8 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ VVT NP++++ LI + ++ A +F LGA F + ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVVTGTNPVHALLYLIISLISVAMIFFALGAPFAGALEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + G + G + ++ A V + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVAQERGWLKPG-IWAGPVILGTLLLAELLYVLFVAPSGAGI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G L+ Y +E++ +LL + + A L ++
Sbjct: 121 SGTTVGPKAVGISLFGPYLLVVELASMLLLAAAVTAFHLGRNEAKE 166
>gi|121613130|ref|YP_001001210.1| NADH dehydrogenase subunit J [Campylobacter jejuni subsp. jejuni
81-176]
gi|167006103|ref|ZP_02271861.1| NADH dehydrogenase subunit J [Campylobacter jejuni subsp. jejuni
81-176]
gi|218563159|ref|YP_002344939.1| NADH dehydrogenase subunit J [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|87249905|gb|EAQ72864.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
jejuni 81-176]
gi|112360866|emb|CAL35667.1| NADH dehydrogenase I chain J [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|315927684|gb|EFV07015.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Campylobacter jejuni subsp. jejuni DFVF1099]
Length = 172
Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 76/171 (44%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++L F FS + + + V +N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E K + + + L + +
Sbjct: 61 YSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSTILLLAMLIGFKYQNISTDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AIVL + K
Sbjct: 121 LNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAIVLTHKELTKEK 171
>gi|269128577|ref|YP_003301947.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Thermomonospora curvata DSM 43183]
gi|268313535|gb|ACY99909.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thermomonospora curvata DSM 43183]
Length = 184
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F L +A+ S+ LVVT R +++ L+ AF AG +L+L AEFVA ++
Sbjct: 1 MTAAEVVFALLGVVAVGSAVLVVTTRQLVHAALWLVVAFGALAGCYLVLTAEFVAWTQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS---FFIGILAAELIVCASNFMVFSA 117
+YVGAV+V LF IM+ I L S + +A +V
Sbjct: 61 IYVGAVVVLLLFGIMLTRAPIGRVPRSGADDPLDSGNRWAALAVALATAAVLVTVLVMGF 120
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ L G E +G L+ + P E+ +LL +++GAIVL
Sbjct: 121 KDAYIDLEAGGGGAEPLGGSLFRTWVLPFEVLSVLLLAALVGAIVLSR 168
>gi|290790888|gb|ADD63144.1| NADH-plastoquinone oxidoreductase subunit 6 [Microlaena stipoides]
Length = 176
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + ++LL + FVA+ L++YVGA+ + +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYILLNSYFVAVAQLLIYVGAINILIIFAVMFVNGSEWSKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I I + + S + + NNV+ IG L
Sbjct: 90 KNFWTIGDGFTLLVCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELISIILLVSLIGAITMAR 175
>gi|323345261|ref|ZP_08085484.1| NADH-quinone oxidoreductase subunit J [Prevotella oralis ATCC
33269]
gi|323093375|gb|EFZ35953.1| NADH-quinone oxidoreductase subunit J [Prevotella oralis ATCC
33269]
Length = 173
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + S + + S+ + V + + + LIF AGL+ LL ++ + +
Sbjct: 1 MANLIMFCILSVVILGSAIMCVMTKRIMRAATFLIFVLFGVAGLYFLLDYTYLGAAQISI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + V ++F I ++ + +G + + L +
Sbjct: 61 YAGGITVLYIFAIQLVSKRTLQGLVERIKGSRLIAGLLVSLFGLATVVIVLLKNKFLDMS 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + IG L QY P E LL +IG +++ + +
Sbjct: 121 ASVSDTEVPMNTIGTALVGSEKYQYVLPFEFISVFLLACIIGGLMIARKEDKK 173
>gi|283795060|ref|YP_003359476.1| NADH dehydrogenase subunit 6 [Synedra acus]
gi|261279716|gb|ACX62024.1| NADH dehydrogenase subunit 6 [Synedra acus]
Length = 198
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 15/183 (8%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ FF+LFSF+ +SS V+++RN I SV SLI F+ ++ L L+L EF A + L+V
Sbjct: 1 MFTKGFFHLFSFLLTLSSISVISLRNSIQSVVSLIVCFITSSILLLILNCEFFAFLFLIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ V FLF++MML++ + FLG I + + + E+
Sbjct: 61 YVGAIAVLFLFVLMMLELKHLDNKANLFHIFLGLSVPVIFFLLTLPFIDSCFALNPYSEV 120
Query: 122 SR---------------LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ + ++E +G++LYT+YA ++G IL L+++ VL +
Sbjct: 121 FQQSNRIFIENCFDEFYIEDDTTDIEVLGQLLYTRYALQFLLTGLILTLAVVCVGVLTID 180
Query: 167 HRR 169
++
Sbjct: 181 RKK 183
>gi|229591261|ref|YP_002873380.1| NADH dehydrogenase subunit J [Pseudomonas fluorescens SBW25]
gi|312961694|ref|ZP_07776192.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Pseudomonas
fluorescens WH6]
gi|229363127|emb|CAY50148.1| NADH dehydrogenase I chain J [Pseudomonas fluorescens SBW25]
gi|311283953|gb|EFQ62536.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Pseudomonas
fluorescens WH6]
Length = 167
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A++S+ V+T NP++++ LI + + A F LGA F ++ ++ Y G
Sbjct: 2 EFAFYFASGIAVVSTLRVITNTNPVHALLYLIISLIAVAMTFFSLGAPFAGVLEVIAYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + G + ++ A L++ +++F+ + + +
Sbjct: 62 AIMVLFVFVVMMLNLGPASVAQERVWLKPGIWLGPVVLAALLLGELLYVLFAHQSGQA-I 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL + I A L ++
Sbjct: 121 GHTTVDAKAVGISLFGPYLLVVELASMLLLAAAITAFHLGRNEAKE 166
>gi|333031509|ref|ZP_08459570.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
coprosuis DSM 18011]
gi|332742106|gb|EGJ72588.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
coprosuis DSM 18011]
Length = 171
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F + + + ++ S L VT + S L+F + AG++ L F+ + L+V
Sbjct: 4 TFEAVVFAVLALIIVVFSVLTVTTSRILRSATYLLFVLLGTAGIYFQLNYSFLGAVQLMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + V ++F I++ K F++G + A + F++ +
Sbjct: 64 YAGGITVLYVFAILLTSSKGMNDRAEK--LPKSKFWVGAITAVVSFLVCAFLILKNVFKE 121
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + IGK + QY P E+ G +LL +IGAIV+ +
Sbjct: 122 AMFNDVEVGMNQIGKTMLGTEKFQYLIPFELMGVLLLACVIGAIVIARKR 171
>gi|332296564|ref|YP_004438487.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thermodesulfobium narugense DSM 14796]
gi|332179667|gb|AEE15356.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Thermodesulfobium narugense DSM 14796]
Length = 171
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 92/168 (54%), Gaps = 1/168 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + LFF F+ +I+ S +V+T +N I++V + FV+ +G++L L AEF AMI ++
Sbjct: 1 MSVPVLFFSYFALASIVISLIVITRKNYIHAVLWTLLLFVHISGIYLFLNAEFFAMIQMI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA++V +F+IM+L++ E + F+ ++ + G+
Sbjct: 61 VYAGAILVMLIFVIMLLNVKHEDHLSDVSSLSIPKAFLVFCVLGVLAIVLQTSYLNTTGK 120
Query: 121 LS-RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S LV K ++ + +G++ Y++ PL I G +L + MI AIVL +
Sbjct: 121 FSIDLVNKVSDAKLLGQIFYSEANLPLIIMGVVLFVPMIAAIVLAGKR 168
>gi|317051062|ref|YP_004112178.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Desulfurispirillum indicum S5]
gi|316946146|gb|ADU65622.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfurispirillum indicum S5]
Length = 168
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 78/166 (46%), Gaps = 1/166 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ +L F F+ ++I + ++ R+P+ S I ++ AGL+ LL A+ + ++V
Sbjct: 3 IVAALLFLAFATLSIAGAAGLILFRHPLNCAVSFIITLISLAGLYALLSAKVLFAFQIIV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA++ LFIIM +++ E R FL + + + +
Sbjct: 63 YAGAIMSLILFIIMFINVRDEDLPDESNRIFLMA-GGCVFLVPIAWILLKAIFALPYVST 121
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + G +L+T + P E+ +LL++++G +VL R
Sbjct: 122 AIVGDGFGGIHQFGMMLFTDWILPFEVVSALLLVALVGGVVLAKRR 167
>gi|168703223|ref|ZP_02735500.1| hypothetical protein GobsU_27071 [Gemmata obscuriglobus UQM 2246]
Length = 191
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 68/188 (36%), Gaps = 18/188 (9%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F + S+ VV R+ + L+F V + ++ LLGAEF L+
Sbjct: 1 MSLPVILFAVVGAATCASALGVVAARDVVRMAVWLLFTLVGVSLIYFLLGAEFAGAAQLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVG +V +F +M+ ++ + +G+ L+ S + GE
Sbjct: 61 VYVGGTLVLVVFGVMLTAHGPLRELRTRRTEWFVGGALGVALFTLLAVVSLKLGSPTAGE 120
Query: 121 LSRLVFKGNNVENIGK------------------VLYTQYAYPLEISGFILLLSMIGAIV 162
+ +G T Y P EI LL+ ++GA
Sbjct: 121 DPLPGPGPLGMSFLGATDTSPKGAVSGTPTGGVVRTPTAYLLPFEIVSVHLLVVLVGAAY 180
Query: 163 LMLRHRRD 170
L R+
Sbjct: 181 LARAKRKR 188
>gi|86152311|ref|ZP_01070522.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
jejuni 260.94]
gi|88596684|ref|ZP_01099921.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
jejuni 84-25]
gi|315124981|ref|YP_004066985.1| nadh-quinone oxidoreductase, j subunit [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|85840800|gb|EAQ58051.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
jejuni 260.94]
gi|88191525|gb|EAQ95497.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
jejuni 84-25]
gi|284926765|gb|ADC29117.1| NADH dehydrogenase I chain J [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315018703|gb|ADT66796.1| nadh-quinone oxidoreductase, j subunit [Campylobacter jejuni subsp.
jejuni ICDCCJ07001]
gi|315930445|gb|EFV09509.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
jejuni 305]
Length = 172
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 76/171 (44%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++L F FS + + + V +N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E K + + + L + +
Sbjct: 61 YSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSAILLLAMLIGFKYQNISTDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AIVL + K
Sbjct: 121 LNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAIVLTHKELTKEK 171
>gi|304382885|ref|ZP_07365368.1| NADH dehydrogenase I [Prevotella marshii DSM 16973]
gi|304336070|gb|EFM02317.1| NADH dehydrogenase I [Prevotella marshii DSM 16973]
Length = 174
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + +IS+ V + + + L+F AG++ LL F+ L +
Sbjct: 1 MANLIIFGILAAIILISAVFCVMTKRIMRAATFLLFVLFGIAGIYFLLDYTFLGAAQLSI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + + ++F I ++ +G I + A L+ + + +
Sbjct: 61 YAGGITMIYIFAIQLVSKRTLQGLTEHVKGSQLVLGILLSLAGLVTVVAVLLKNEFINKA 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ ++ IG L QY P E LL +IG +++ + + +
Sbjct: 121 MEMADSEVPMKTIGTALMGSEKYQYVLPFEFISIFLLACIIGGLMVSHKKKEE 173
>gi|239905973|ref|YP_002952712.1| putative NADH-quinone oxidoreductase chain J [Desulfovibrio
magneticus RS-1]
gi|239795837|dbj|BAH74826.1| putative NADH-quinone oxidoreductase chain J [Desulfovibrio
magneticus RS-1]
Length = 174
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M FYLF+ + + ++ L T RNP+++V + F++ + +LGA +++T+V
Sbjct: 1 MTPLGALFYLFAALGLGAAVLTATRRNPVHAVCCAVAVFLSVGAMLAVLGAPLPSVLTVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA++V FLF+IM+L + G F + A + A ++ +
Sbjct: 61 VYAGAIMVLFLFVIMLLGLPAGDG-----TLPPGRFLVPATLAAATLVALFALIGADPTA 115
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ L +G +L+ +Y +E ILL + + A++L+ R + K
Sbjct: 116 KTLLPAAMAGPAAVGTILFDKYWLAVEAVS-ILLFAALAAVMLLGRGKTGRK 166
>gi|218886694|ref|YP_002436015.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|218757648|gb|ACL08547.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 168
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
L F + + ++ F+ V + + ++ L+ + AG++LLL A F+A + +++YVGA
Sbjct: 7 LAFAFYFLVIVVGCFMAVGCASLVRALVGLVATLLGVAGMYLLLNAPFMAFMQILIYVGA 66
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+ V F +M+ D E E + A ++ + S+++
Sbjct: 67 ICVLIFFALMLARADAEGDEADPAPAPRTFKGV---LAAMLPGTLLAPILMLHPTASKMI 123
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +G+ L Y P E+ +LL+SM GA++L+ R
Sbjct: 124 PAEVPLAELGRRLMEDYVLPFELISMVLLISMAGAVLLVWERRDK 168
>gi|86152855|ref|ZP_01071060.1| nadh-quinone oxidoreductase, j subunit [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|85843740|gb|EAQ60950.1| nadh-quinone oxidoreductase, j subunit [Campylobacter jejuni subsp.
jejuni HB93-13]
Length = 172
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/171 (21%), Positives = 75/171 (43%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++L F FS + + + V +N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E K + + + L + +
Sbjct: 61 YSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSAILLLAMLIGFKYQNISTDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AI L + K
Sbjct: 121 LNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAITLTHKELTKEK 171
>gi|312885981|ref|ZP_07745609.1| NADH dehydrogenase subunit J [Mucilaginibacter paludis DSM 18603]
gi|311301518|gb|EFQ78559.1| NADH dehydrogenase subunit J [Mucilaginibacter paludis DSM 18603]
Length = 183
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ + FY+ F+A+ S+ LV +N + S+F AGL++ A+FVA+ +V
Sbjct: 1 MNIEQILFYVMGFIALASALLVAASKNLVRSLFLFFVTLFALAGLYVFALADFVAVTQIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA----------- 109
+YVG V+V LF M+ + D+ + F+ + L ++
Sbjct: 61 IYVGGVLVLMLFAFMLSNKDVLNNLQQGNNKFISVGKLPALLVAVLFLIVLVNAIIKAQP 120
Query: 110 -SNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S + ++ + + N + NIG L T+Y P E+ +L++++IGA L +
Sbjct: 121 DSLPWIKASVQHDNVIKPGDNMLSNIGINLMTRYLLPFEVVSILLMMTLIGAAHLARKE 179
>gi|159106917|ref|YP_001531335.1| NADH-plastoquinone oxidoreductase subunit 6 [Lolium perenne]
gi|221272331|sp|A8Y9E0|NU6C_LOLPR RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|158934451|emb|CAO86029.1| NADH-plastoquinone oxidoreductase subunit 6 [Lolium perenne]
Length = 176
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + + LL + FVA+ L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I I+ + + S + + NNV+ IG L
Sbjct: 90 KNYWTIGDGFTSIVCITIVFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELISIILLVSLIGAITMAR 175
>gi|213018784|ref|ZP_03334592.1| NADH dehydrogenase I, J subunit [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995735|gb|EEB56375.1| NADH dehydrogenase I, J subunit [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 143
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 54/146 (36%), Positives = 91/146 (62%), Gaps = 8/146 (5%)
Query: 56 MITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
M+ ++VY+GAV V FLF++MMLDID R ++GF +G + + +F++
Sbjct: 1 MMVMIVYIGAVAVLFLFVVMMLDIDYI----RLRQGFAKHCTLGAMLCVVFFLVISFVIR 56
Query: 116 SAEGELSRLV-FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML-RHRRDIKR 173
S+ +S ++ + NNV+ IG +LYT Y Y +SG +LL++++GAI L L ++ +K+
Sbjct: 57 SSAPNISNVINYNTNNVKAIGNLLYTDYMYAFHLSGILLLVAIVGAIALTLQDKKKGVKK 116
Query: 174 QDISKQLESNPDNSIVMVKVKSGKGI 199
Q++ KQL +S+ +VK K GKG+
Sbjct: 117 QNVLKQL--TQSSSVKLVKAKFGKGV 140
>gi|14017626|ref|NP_114311.1| NADH dehydrogenase subunit 6 [Triticum aestivum]
gi|118430356|ref|YP_874790.1| NADH-plastoquinone oxidoreductase subunit 6 [Agrostis stolonifera]
gi|23821900|sp|Q95H44|NU6C_WHEAT RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|221272307|sp|A1EA62|NU6C_AGRST RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|13928259|dbj|BAB47088.1| NADH dehydrogenase ND6 [Triticum aestivum]
gi|118201265|gb|ABK79634.1| NADH-plastoquinone oxidoreductase subunit 6 [Agrostis stolonifera]
Length = 176
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + + LL + FVA+ L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I I+ + + S + + NNV+ IG L
Sbjct: 90 KNYWTIGDGFTSLVCITIVFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELISIILLVSLIGAITMAR 175
>gi|75286704|sp|Q5SCZ0|NU6C_HUPLU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|50660038|gb|AAT80760.1| NADH-plastoquinone oxidoreductase subunit 6 [Huperzia lucidula]
Length = 199
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 6/155 (3%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
I+ S VV N +YS F L + V + L++LL A+FVA + +++YVG + V +F +
Sbjct: 22 VILGSLGVVLFTNIVYSAFLLGWVPVCISFLYILLNADFVAAVQILIYVGTINVLIVFAV 81
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG------ 128
M+++ + G+ + L + A+ ++ L L K
Sbjct: 82 MLINKPQYFRFLKYWTVGDGTALALCTSPFLSIIAAILSTPWSKISLIVLSNKIVEEPLT 141
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVL 163
+NV+ IG T P E+ ILL++ +GAI +
Sbjct: 142 DNVQRIGFHSLTDSPLPFELLSIILLVAPVGAITM 176
>gi|229315898|ref|YP_002860124.1| NADH dehydrogenase subunit 6.1 [Micromonas sp. RCC299]
gi|229315908|ref|YP_002860134.1| NADH dehydrogenase subunit 6.2 [Micromonas sp. RCC299]
gi|226431183|gb|ACO55588.1| NADH dehydrogenase subunit 6.1 [Micromonas sp. RCC299]
gi|226431193|gb|ACO55598.1| NADH dehydrogenase subunit 6.2 [Micromonas sp. RCC299]
Length = 268
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 61/108 (56%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY+F+ A+++ +V+ +NP+YSV LI F N +GL LL+ +F AM+ LVVY
Sbjct: 1 MNLVLFYMFASFALLAGIMVIRAKNPVYSVLFLILVFCNVSGLLLLINLDFFAMVFLVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
VGA+ V FLF++MML++ + R G+L I
Sbjct: 61 VGAIAVLFLFVVMMLNVKLAEINDSILRYLPVGGVFGLLFFGEIFLLL 108
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 54/138 (39%)
Query: 55 AMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
++ V+ LF + + + ++ F+ + + +
Sbjct: 129 SITMYSVFGVLSSATLLFSLFSQPWNSLTIFSQWQKHFIQIQDTIANYNTFVQEQALTVN 188
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + + IG V+YT Y ++ ILL++MIG+IVL + +KRQ
Sbjct: 189 DLEYVVWPYTMEQTTTIHTIGHVVYTYYMVFFILASIILLIAMIGSIVLTMHKGVFVKRQ 248
Query: 175 DISKQLESNPDNSIVMVK 192
D+ +Q + ++ VK
Sbjct: 249 DVFEQNTRDFSKTLRKVK 266
>gi|4150871|emb|CAA09814.1| ndhG protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + F+ ++ + VV + NPIYS FSL V + + LL + FVA+ L++Y
Sbjct: 7 IHEILMLFGGFILLLGALGVVLLTNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + GF I + + +
Sbjct: 67 VGAINVLIIFAVMFVNGSEWSKDKNYWTIGDGFTSLVCITFVFSLMTTIPDTSWYGILWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + NNV+ IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TRSNQIVEQGLINNVQQIGIHLATDFYLPFELISIILLVSLIGAITMAR 175
>gi|322506936|gb|ADX02390.1| nuoJ [Acinetobacter baumannii 1656-2]
gi|323516803|gb|ADX91184.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J) [Acinetobacter
baumannii TCDC-AB0715]
Length = 163
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/155 (27%), Positives = 86/155 (55%), Gaps = 1/155 (0%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
MAI+S+ VVT NP++++ SLI + + AG+F+++GA F + ++VY GA++V F+F+
Sbjct: 1 MAIVSTVRVVTNTNPVHALLSLIVSLLAVAGIFMIVGAPFAGALEIIVYAGAIMVLFVFV 60
Query: 74 IMMLDIDIEVAEPRKKRGFLGSF-FIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
+MML++ E +K ++ + +++ L + + + L + +
Sbjct: 61 VMMLNLGQHTVEQERKWLSSDAWAYPALMSFLLGLLLVWMLGGEYTTISAPLGAQVIGPK 120
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+G+ L+T Y +E++ +LL +++ A L R
Sbjct: 121 VVGQALFTHYLLLVEVAAMLLLAALVAAYHLGKRE 155
>gi|108796794|ref|YP_636372.1| NADH dehydrogenase subunit 6 [Staurastrum punctulatum]
gi|122211817|sp|Q32S04|NU6C_STAPU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|61393562|gb|AAX45703.1| subunit 6 of NADH-plastoquinone oxidoreductase [Staurastrum
punctulatum]
Length = 181
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 2/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ S Y ++ VV IYS L FV A L+LLL A+F+A +++
Sbjct: 9 TINSPILYFLDVGILLGGLGVVFFGKIIYSALFLGVVFVCVALLYLLLNADFLAAAQILI 68
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRG--FLGSFFIGILAAELIVCASNFMVFSAEG 119
YVGA+ V +F IM+++ +K L F + L + LI+ N
Sbjct: 69 YVGAINVLIVFAIMLINKPETKINKKKITFGDILSGFSVFGLFSFLIIMILNTTWLQPTL 128
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +++ IG L T P E+ +LL++++GAI + +
Sbjct: 129 VSQEVKNSFQSIDIIGIHLLTDLLLPFELLSILLLVALVGAITIARKE 176
>gi|157415786|ref|YP_001483042.1| NADH dehydrogenase subunit J [Campylobacter jejuni subsp. jejuni
81116]
gi|157386750|gb|ABV53065.1| NADH dehydrogenase I chain J [Campylobacter jejuni subsp. jejuni
81116]
gi|307748425|gb|ADN91695.1| NADH-ubiquinone oxidoreductase, NQO10 subunit (NQO10)
[Campylobacter jejuni subsp. jejuni M1]
gi|315931250|gb|EFV10220.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Campylobacter jejuni subsp. jejuni 327]
Length = 172
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 76/171 (44%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++L F FS + + + V +N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F IM D E E K + + + L + +
Sbjct: 61 YSGAVLGLYSFAIMFFDASKEFKEQLKAKKSFFTLVVLSAILLLAMLIGFKYQNISTDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AIVL + K
Sbjct: 121 LNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAIVLTRKELTKEK 171
>gi|34500967|ref|NP_904152.1| NADH dehydrogenase subunit 6 [Amborella trichopoda]
gi|75275903|sp|Q70XW1|NU6C_AMBTC RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|34481682|emb|CAD45159.1| NADH dehydrogenase ND6 subunit [Amborella trichopoda]
Length = 177
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 6/171 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ S VV + NPIYS FS V + +L + FVA L++Y
Sbjct: 7 IHDILLVSLGSGIILGSLGVVLLTNPIYSAFSSGLVLVRISLFHILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ G IL + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYNNFHLWTVGDGISSVVCTSILFSLIATILDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S + + +NV+ IG L T + P E+ ILL++++GAI +
Sbjct: 127 TRSNQIIEQDLTSNVQQIGIHLSTDFFLPFELISIILLVALVGAIAMARAE 177
>gi|167044393|gb|ABZ09070.1| putative NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[uncultured marine crenarchaeote HF4000_APKG6D3]
Length = 177
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
M F + + I+S+ + +R+ IY +L+ AG F+LL + FVA+ + V
Sbjct: 6 NMVDALFLGIAVLTIVSAIAALEMRSLIYGGLALMGTLGGIAGFFILLDSPFVALFQIAV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVG++ V LF+IM++ ++ + + GI +++ ++F++
Sbjct: 66 YVGSIAVLILFVIMLVKSELIFQKKE----DPKRRYAGIALMLILMICLGAVIFNSGLSS 121
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + IG+ Y L +L S+ GA++L R
Sbjct: 122 ITTEEPPVDYKEIGEDFLIYYWPALIAMALVLSGSITGALILARRQ 167
>gi|118430440|ref|YP_874705.1| NADH-plastoquinone oxidoreductase subunit 6 [Hordeum vulgare subsp.
vulgare]
gi|126302578|sp|O98693|NU6C_HORVU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|118201094|gb|ABK79465.1| NADH-plastoquinone oxidoreductase subunit 6 [Hordeum vulgare subsp.
vulgare]
Length = 176
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + + LL + FVA+ L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I + + + S + + NNV+ IG L
Sbjct: 90 KNYWTIGDGFTSLVCITFVFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELISIILLVSLIGAITMAR 175
>gi|206890416|ref|YP_002248753.1| NADH-ubiquinone oxidoreductase chain 6 [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742354|gb|ACI21411.1| NADH-ubiquinone oxidoreductase chain 6 [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 170
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 6/166 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ +F+ F I S V+ +N I+S F L+ ++ A +FL L AEF+ +I ++V
Sbjct: 4 LIEQVFYVYFFISLTILSIAVIASKNIIHSAFFLLIFLLHVAAIFLFLNAEFLMIIQIIV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVG V+ F+F IM+++I E R + + G L + + +
Sbjct: 64 YVGGVLALFIFAIMIMNIKEEFRHKRFVKFSIAGLITGFLFLAGLYIFLGTV------KS 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V ++V ++GK+LY+ Y P EI +LL++M+G I++ +
Sbjct: 118 PENVLIKSDVNSLGKLLYSYYFLPFEILSLVLLIAMVGGIIIAKKT 163
>gi|156743325|ref|YP_001433454.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Roseiflexus
castenholzii DSM 13941]
gi|156234653|gb|ABU59436.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Roseiflexus
castenholzii DSM 13941]
Length = 170
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 87/162 (53%), Gaps = 4/162 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + F + + +AI+ + ++ N I+S L+ FV + L++LL A F+ +I L+VY
Sbjct: 1 MELIIFLITAAVAIVGAVAMLLSPNAIHSAIFLLINFVAISVLYVLLYAPFLFVIQLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA+IV FLF++M+L + + F +G+ A +++ ++V +
Sbjct: 61 AGAIIVLFLFVVMLLGAERA---EDTRERFAWQRPLGLTLAAILLGLIGYIVLRGPASGA 117
Query: 123 RLV-FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVL 163
+ + E I + L+T Y P EI+ F+LL +++G +VL
Sbjct: 118 MVADQQFAAPERIAETLFTTYLLPFEITAFLLLAAIVGVVVL 159
>gi|83589832|ref|YP_429841.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Moorella
thermoacetica ATCC 39073]
gi|83572746|gb|ABC19298.1| NADH dehydrogenase subunit J [Moorella thermoacetica ATCC 39073]
Length = 168
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 4/168 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ +L F++ + + I ++ VV ++N ++S L+ F AGL++LL AEF+A + L+VY
Sbjct: 4 ISALLFWVLAAITIAAALAVVLLKNIVHSALYLVLTFAGVAGLYILLQAEFLAAVQLLVY 63
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV + +F +M+ A +L + + + +IV + M ++ +
Sbjct: 64 AGAVAILIVFAVMLTRRGDIKASNLFNINYLAAGVVSLALFVVIVLGTGRMTWTTAPAQA 123
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
++A P E++ +LL++M+GAI+L + +
Sbjct: 124 PANNVAAIA----NAFLGRFAIPFEVAAVLLLVAMVGAILLARGGKPE 167
>gi|313199668|ref|YP_004021284.1| NADH-plastoquinone oxidoreductase subunit 6 [Isoetes flaccida]
gi|291575397|gb|ADE18110.1| NADH-plastoquinone oxidoreductase subunit 6 [Isoetes flaccida]
Length = 189
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 70/172 (40%), Gaps = 6/172 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ F I+ VV++ N +YS F + +LLL A+FVA + + ++
Sbjct: 8 IHEAIFVSLESGPILGGPGVVSLTNIVYSAPLSGSVFACISPPYLLLNADFVAAVQISIH 67
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG---SFFIGILAAELIVCASNFMVFSAEG 119
VGAV V + + + + G + I + +I+ +
Sbjct: 68 VGAVNVSIVSAVTSTNEPQSFHLSTYRTAGDGITLALCISLFFLPIIMILDTSWSRVSLI 127
Query: 120 ELSRLVFKG---NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
L + + ++V+ IG L T P E+ +LL++++GAI R +
Sbjct: 128 VLPGGIVEEPLTDDVQRIGSHLLTDSLLPFELLSIVLLVALVGAITTARRGK 179
>gi|78042971|ref|YP_360251.1| proton-translocating NADH-quinone oxidoreductase subunit J
[Carboxydothermus hydrogenoformans Z-2901]
gi|77995086|gb|ABB13985.1| proton-translocating NADH-quinone oxidoreductase, J subunit
[Carboxydothermus hydrogenoformans Z-2901]
Length = 169
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+ + F + +F+ I S+ VV +RN ++SV L FV A +L+L A F+A + LVVY
Sbjct: 5 EVIAFAIVAFLLIFSALGVVFMRNIVHSVLFLAATFVLMAVTYLMLDAGFLAGVQLVVYA 64
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GAV + +F +M+ R + I++ + + S +V + R
Sbjct: 65 GAVSIMVVFAVMLTKRSDLHETNLFNRL---TIPGAIISFLVFIGLSWVVVKTPWNLAER 121
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +++ ++ P E++ +LL+++IGAI+L L +
Sbjct: 122 PLVDPMAINKLADLMFGKFVIPFEVAAVLLLVALIGAIILALEVKPQ 168
>gi|115605073|ref|YP_784525.1| NADH-plastoquinone oxidoreductase subunit 6 [Piper cenocladum]
gi|122164316|sp|Q06GK8|NU6C_PIPCE RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|112253802|gb|ABI14523.1| NADH-plastoquinone oxidoreductase subunit 6 [Piper cenocladum]
Length = 176
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + ++ S V+ + N IYS FSL F V + ++L + FVA L++Y
Sbjct: 7 IHDILLVFLGSGIVLGSLGVILLTNTIYSAFSLGFVLVCISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M + + G + + + + +
Sbjct: 67 VGAINVLIIFAVMFMKGSEYSNDFSIWTVGDGVTSLVCTSIFFSLITTILDTSWYGIIWT 126
Query: 123 RLVFKG------NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +NV+ IG L T + P E+ +LL+++IGAI +
Sbjct: 127 TRSNQIMEQDLLSNVQQIGIHLVTDFILPFELISIVLLVALIGAIAMAR 175
>gi|149374619|ref|ZP_01892393.1| NADH dehydrogenase (quinone) [Marinobacter algicola DG893]
gi|149361322|gb|EDM49772.1| NADH dehydrogenase (quinone) [Marinobacter algicola DG893]
Length = 180
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L FY+ +A++++ V+T +P+++V LI + + A +F LGA F + ++VY G
Sbjct: 2 ELAFYVCGLVAVLATIGVITGTSPVHAVVYLIVSLIAVALVFFALGAPFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + R ++G L++ + ++ G +
Sbjct: 62 AIMVLFVFVVMMLNLRSDAEQEPSWRNPR--HWVGPSLLTLLLLGALAVLIGQGGMGQMI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + L+ + +E++ +LL +++ A + R K
Sbjct: 120 DGELLTARAVALTLFGPWLIVVELAAILLLAALVTASHVGRRSNPLRK 167
>gi|58578623|ref|YP_203313.1| NADH dehydrogenase subunit 6 [Rhizopus oryzae]
gi|57339010|gb|AAW49480.1| NADH dehydrogenase subunit 6 [Rhizopus oryzae]
Length = 214
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 89/213 (41%), Gaps = 44/213 (20%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M ++ L F +++S LV+T RNP+ SV LI F+N A +LLG F+ + L+VY
Sbjct: 1 MNAILLDLLVFGSVLSGILVITSRNPVVSVLFLISVFINVACYLILLGINFIGLAYLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF---------- 112
VGA+ + FLF+IMML+I + + + +L + S
Sbjct: 61 VGAIAILFLFVIMMLNIKLVELQDSSEDYSNPYPLAFVLGTLFVSGLSLTNKNIWGVHSE 120
Query: 113 ----------------------------------MVFSAEGELSRLVFKGNNVENIGKVL 138
+ + + + +IG+VL
Sbjct: 121 QSLFGSSNGSGIKLDLSGLFDWVNLLSFKSNTLETLTINHSNWDNVFVSMDQINSIGQVL 180
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
YT +A L ++ ILLL+M+G I+L L + +
Sbjct: 181 YTSHALFLIVASMILLLAMVGPIILCLNPTKRV 213
>gi|289548986|ref|YP_003473974.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermocrinis
albus DSM 14484]
gi|289182603|gb|ADC89847.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermocrinis
albus DSM 14484]
Length = 176
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 91/169 (53%), Gaps = 2/169 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
MQ F FS A++ VV + NPIY + SL+ + ++ AG+F + GAE V + L++Y
Sbjct: 1 MQWAAFGAFSLSALLFGLGVVLLPNPIYVILSLLASLISIAGVFFVAGAELVGALQLLIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFF--IGILAAELIVCASNFMVFSAEGE 120
A+ VF++F++ + + + + R F + +L ++IV + S +GE
Sbjct: 61 AVAITVFYVFVLTAVPWEKALKKDSHYRVEGALTFPLLLLLYGQVIVTFLLGVSVSPKGE 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ ++ N E +G +L+++Y E+ +LL+ M+GAI++ + R
Sbjct: 121 IRNILKDLTNTEAVGVILFSKYFLAFELVSLVLLIGMLGAILIGRKEER 169
>gi|258647049|ref|ZP_05734518.1| NADH dehydrogenase I, subunit 6 [Prevotella tannerae ATCC 51259]
gi|260853164|gb|EEX73033.1| NADH dehydrogenase I, subunit 6 [Prevotella tannerae ATCC 51259]
Length = 170
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 78/171 (45%), Gaps = 5/171 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ F + + + + S+F V ++ I + L F + AG++ L+G F+ + ++
Sbjct: 1 MDSHNIMFVVLAVLMVFSAFATVLTKSIIRAATYLFFVLLGTAGMYFLMGYTFLGAVQVM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY G ++V ++F I++ + K+ S + ++ + A F + +
Sbjct: 61 VYAGGIVVLYVFAILLTKGAKDKLSDNTKQKIFASALLSLVGFGAFIYAFIKAGFIKD-K 119
Query: 121 LSRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRH 167
L+ +++ IG L + Y P E+ +LL ++ A+++ +
Sbjct: 120 LAAPDESVISMKEIGMNLLSTEANGYLLPFEVVSLLLLACIVAALLIARKR 170
>gi|74325170|ref|YP_316590.1| NADH dehydrogenase subunit 6 [Thalassiosira pseudonana]
gi|74100236|gb|AAZ99397.1| NADH dehydrogenase subunit 6 [Thalassiosira pseudonana]
Length = 201
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 104/201 (51%), Gaps = 12/201 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ +LFFY FSF+ I SS + V +N IYSV L+ +FV+++ + LL E+V++I +++
Sbjct: 1 MIVNLFFYFFSFVLITSSLMTVFSQNSIYSVLFLVLSFVSSSSILFLLECEYVSLIFIII 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG-- 119
YVGA+ V FLF++MMLDI + F FIGI I+ +
Sbjct: 61 YVGAIAVLFLFVVMMLDIKTISLVKDSLKYFPFGSFIGIAFLIEILLVVPSTFEAINPYN 120
Query: 120 ---------ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML-RHRR 169
+ + + ++G +LYT Y +SG ILLL+ IG + L+L R +
Sbjct: 121 ISFLCNFHLDWFNKLDYFTEIMSVGHLLYTDYLIQFLLSGNILLLATIGPVTLVLIRSIK 180
Query: 170 DIKRQDISKQLESNPDNSIVM 190
K+Q KQL ++ + +
Sbjct: 181 TTKKQITFKQLSRTYNSVLYI 201
>gi|283956942|ref|ZP_06374414.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
jejuni 1336]
gi|283791443|gb|EFC30240.1| NADH-quinone oxidoreductase, J subunit [Campylobacter jejuni subsp.
jejuni 1336]
Length = 172
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 76/171 (44%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++L F FS + + + V +N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E K + + + L + +
Sbjct: 61 YSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFTLVVLSAILLLAMLIGFKYQNISTDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AIVL + K
Sbjct: 121 LNDPALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAIVLTHKELAKEK 171
>gi|148262405|ref|YP_001229111.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Geobacter
uraniireducens Rf4]
gi|146395905|gb|ABQ24538.1| NADH dehydrogenase subunit J [Geobacter uraniireducens Rf4]
Length = 161
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 88/165 (53%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M++ FY+ + +A+I++ +T ++ ++++ L+ +F A +F LLGA VA+ +++Y
Sbjct: 1 MEATLFYILAAVAVIATGFAITEKHTVHAIVYLVTSFFALAVVFYLLGAPLVAVFEVIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F+IMMLD+ P K + L I+ A+ + +A+ +
Sbjct: 61 AGAIMVLFMFVIMMLDL----GHPEKVALPGMRDWWPALLLGGIILAAIIALLTAQQQAV 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +VL+ +Y +EI LL +++GA+ L R
Sbjct: 117 IGKLPYVGIRDFSRVLFRKYGIAVEIISMQLLFALVGALYLGRRR 161
>gi|329765839|ref|ZP_08257405.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Candidatus
Nitrosoarchaeum limnia SFB1]
gi|329137682|gb|EGG41952.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Candidatus
Nitrosoarchaeum limnia SFB1]
Length = 170
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F S + I S+ + +R+ IY +L+ AG FLLL + FVAM L VY
Sbjct: 1 MADVTFLALSVITIGSAIAALEMRSLIYGSIALMGTLGGIAGFFLLLDSPFVAMFQLAVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VG++ V LF +M++ ++ + KR F+GI + + A ++ + +
Sbjct: 61 VGSIAVLILFTVMLVKRELIFKKIEDKRRK----FVGIALMLVFMVALGSIIMDSGIKSI 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ NIG T Y L + IL S+ GA+VL R
Sbjct: 117 TTNEPAVDFRNIGADFLTYYWPALILMALILTGSVTGALVLARRE 161
>gi|150004308|ref|YP_001299052.1| NADH dehydrogenase I, chain J [Bacteroides vulgatus ATCC 8482]
gi|237709344|ref|ZP_04539825.1| NADH dehydrogenase I [Bacteroides sp. 9_1_42FAA]
gi|237724578|ref|ZP_04555059.1| NADH dehydrogenase subunit I [Bacteroides sp. D4]
gi|254883417|ref|ZP_05256127.1| NADH dehydrogenase subunit I [Bacteroides sp. 4_3_47FAA]
gi|265755020|ref|ZP_06089934.1| NADH dehydrogenase subunit I [Bacteroides sp. 3_1_33FAA]
gi|294776881|ref|ZP_06742344.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
vulgatus PC510]
gi|319644243|ref|ZP_07998756.1| NADH dehydrogenase subunit I [Bacteroides sp. 3_1_40A]
gi|149932732|gb|ABR39430.1| NADH dehydrogenase I, chain J [Bacteroides vulgatus ATCC 8482]
gi|229437137|gb|EEO47214.1| NADH dehydrogenase subunit I [Bacteroides dorei 5_1_36/D4]
gi|229456729|gb|EEO62450.1| NADH dehydrogenase I [Bacteroides sp. 9_1_42FAA]
gi|254836210|gb|EET16519.1| NADH dehydrogenase subunit I [Bacteroides sp. 4_3_47FAA]
gi|263234631|gb|EEZ20210.1| NADH dehydrogenase subunit I [Bacteroides sp. 3_1_33FAA]
gi|294449357|gb|EFG17894.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
vulgatus PC510]
gi|317384234|gb|EFV65206.1| NADH dehydrogenase subunit I [Bacteroides sp. 3_1_40A]
Length = 167
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 8/171 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q + F + + + S L VT + + L+F AG++ L F+ + L+
Sbjct: 1 MTLQLIVFIVLALFIAVCSVLAVTTSRILRAATYLLFVLFGTAGIYFQLNYSFLGAVQLL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y G + V ++F I++ + AE K G G ++ + F++ E
Sbjct: 61 IYAGGITVLYVFSILLTSSQGDKAERLKN----GKMVAGAISTIAGLAICLFVMLKNEFL 116
Query: 121 LSRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
S V +V IG L QY P E+ +LL ++G I++ +
Sbjct: 117 PSHFVHGELDVRTIGHALMGMEKYQYILPFEVISVLLLACIVGGILIARKR 167
>gi|302345404|ref|YP_003813757.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
melaninogenica ATCC 25845]
gi|302149226|gb|ADK95488.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
melaninogenica ATCC 25845]
Length = 179
Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 74/176 (42%), Gaps = 7/176 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + F + + + + S+ V+ + + +V +L+F AGL+ LL F+ + +
Sbjct: 1 MARLIMFAVLAVIILASAVFCVSTKRIMRAVTALLFVLFGVAGLYFLLDYTFLGAAQISI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRG---FLGSFFIGILAAELIVCASNFMVFSAE 118
Y G + + ++F I ++ + G FL +F + +I+ V
Sbjct: 61 YAGGITMMYIFAIQLVSKRTLQGLSERWLGKRTFLAAFIALVGFGTVILVLLKNEVLRHT 120
Query: 119 GELSRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +E IG+ L T Y P E LL +IG +V++ +++
Sbjct: 121 VVNGDSLSNEVTMETIGRNLMTANKYGYVLPFEFISVFLLACIIGGLVILNNKKKE 176
>gi|212693816|ref|ZP_03301944.1| hypothetical protein BACDOR_03337 [Bacteroides dorei DSM 17855]
gi|212663705|gb|EEB24279.1| hypothetical protein BACDOR_03337 [Bacteroides dorei DSM 17855]
Length = 167
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 8/171 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q + F + + I S L VT + + L+F AG++ L F+ + L+
Sbjct: 1 MTLQLIVFIVLALFIAICSVLAVTTSRILRAATYLLFVLFGTAGIYFQLNYSFLGAVQLL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y G + V ++F I++ + AE K G G ++ + F++ E
Sbjct: 61 IYAGGITVLYVFSILLTSSQGDKAERLKN----GKMVAGAISTIAGLAICLFVMLKNEFL 116
Query: 121 LSRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
S V +V IG L QY P E+ +LL ++G I++ +
Sbjct: 117 PSHFVHGELDVRTIGHALMGMEKYQYILPFEVISVLLLACIVGGILIARKR 167
>gi|307822809|ref|ZP_07653040.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylobacter
tundripaludum SV96]
gi|307736413|gb|EFO07259.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Methylobacter
tundripaludum SV96]
Length = 172
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 81/163 (49%), Gaps = 3/163 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FY+ S +A+ ++ +++T N ++ + LI + + LF LLGA F A++ +++Y
Sbjct: 1 MALTLFYITSAVAVFATVMMITRLNAVHGLLYLILSLLAVGVLFFLLGAYFAAVLEVIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F+IMML+ + E + G + L A ++ +V S +
Sbjct: 61 AGAIMVLFVFVIMMLNQGQKTLEQERAWLQPGIWIGPSLLALILFVEMLVIVVSGGSAET 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +G LY Y +E++ +LL ++GA L
Sbjct: 121 GYAVS---AKQVGVALYGPYLLAVELASMLLLAGLVGAYHLGK 160
>gi|78188618|ref|YP_378956.1| NADH dehydrogenase I subunit 6 [Chlorobium chlorochromatii CaD3]
gi|78170817|gb|ABB27913.1| NADH dehydrogenase subunit J [Chlorobium chlorochromatii CaD3]
Length = 171
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FYLF+ + ++S+ VV RN IYS FSL+F F A L++ L A+F+A+ +VVYVG
Sbjct: 8 TAIFYLFAAITVLSAAYVVFTRNVIYSAFSLLFTFFGMAALYVFLSADFIAVTQVVVYVG 67
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V LF +M + + + + K L +L +I ++ ++S
Sbjct: 68 GILVLLLFGVMFTNS---IMQTKLKSDVLHVIPGVVLLVGMIGSMLYMYYTTSIWKISAT 124
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGF 151
+ VE +G ++Y P E+
Sbjct: 125 PLTESIVERVGFETMSRYVLPFEMVSI 151
>gi|297570905|ref|YP_003696679.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Arcanobacterium haemolyticum DSM 20595]
gi|296931252|gb|ADH92060.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Arcanobacterium haemolyticum DSM 20595]
Length = 330
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 2 VMQSLFFYLFSFMAIISSF-LVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
+ +++ F + + + + ++ R + + S+I V A L+ L A F+ ++ +V
Sbjct: 10 MGETILFSVTAVGMVALAIFGLLITRKAVLTTLSVIGVMVGFAVLYTALEAPFMGVVQVV 69
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA+++ FLF++M++ +D + + +G + LI+ F + G
Sbjct: 70 VYTGAILMMFLFVLMLIGVDSADSGHETLKVQRPVAILGGVGIALILIGVAFGAHAPAGI 129
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR--RDIKRQDISK 178
N + ++++ L+++G +L+++ +GA+ L R R I +++++
Sbjct: 130 GLEQANAVTNPVGVATLIFSSSVLTLQLTGTLLIVAALGAMTLTHRDRVKERITQEELAH 189
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
+ + V V K G+
Sbjct: 190 KRMQEFTQAGVHVGQKPPPGV 210
>gi|317153006|ref|YP_004121054.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Desulfovibrio aespoeensis Aspo-2]
gi|316943257|gb|ADU62308.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
aespoeensis Aspo-2]
Length = 169
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
V+ + F +++ + I S V+ + + ++ LI V AG++LLL + F+A + L++
Sbjct: 3 VLAKVAFGIYTAVIIGGSVFAVSSTSLVRALVGLITTLVGVAGMYLLLASPFMAFMQLLI 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V F +M+ + E ++ LAA + A +
Sbjct: 63 YVGAVSVLIFFAVMLTRAESGGDESAPA---PMKTYVFGLAATIAPAAVLGWLVMTRPVQ 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
S + +++ +G+ L Y P E+ IL+++M GA++L R
Sbjct: 120 SIAIPTEVDIKQLGEGLLGTYFLPFELISVILMVAMAGAVLLTWEKR 166
>gi|260912214|ref|ZP_05918766.1| NADH dehydrogenase I [Prevotella sp. oral taxon 472 str. F0295]
gi|260633648|gb|EEX51786.1| NADH dehydrogenase I [Prevotella sp. oral taxon 472 str. F0295]
Length = 173
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + I S+ + V + + + L+F AG++ LL F+ + +
Sbjct: 1 MANIIMFCILAVVIIGSAIVCVFTKRIMRAATFLLFVLFGVAGVYFLLDYTFLGTAQIAI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + + ++F I ++ ++RG + L+ A +
Sbjct: 61 YAGGLTMLYIFAIQLVSKRTLQGLQERQRGKTVVAGALVALIGLVTVALVLLKNQFIDMS 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +V + IG+ L QY P E LL +IG I++ + +
Sbjct: 121 ASMVDAEVPMSVIGEKLVGAGKYQYVLPFEFISVFLLACIIGGIMIARKEDKK 173
>gi|307721741|ref|YP_003892881.1| NADH dehydrogenase subunit J [Sulfurimonas autotrophica DSM 16294]
gi|306979834|gb|ADN09869.1| NADH dehydrogenase subunit J [Sulfurimonas autotrophica DSM 16294]
Length = 188
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FYLF+F+ I ++ VT + +Y++ +L + + F +LGA+F+ + ++V
Sbjct: 1 MFEAVAFYLFAFLTIAMFYITVTTKQALYALTALAAGMIFISAFFFILGADFLGAVQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D EV E + + + + A +++ + MV L
Sbjct: 61 YTGAVMALYAFGMMFFDTTREVKEKQGNKYIIVGLST-LAAVLVVIIFAAPMVSENIVAL 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ N + +G VL+T+Y P E++ +LL++M+ IVL +
Sbjct: 120 YPAIDGVGNTQEVGLVLFTKYLIPFEVAAIMLLVAMVAGIVLAGKK 165
>gi|283778525|ref|YP_003369280.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pirellula
staleyi DSM 6068]
gi|283436978|gb|ADB15420.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pirellula
staleyi DSM 6068]
Length = 328
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ F++ + +AI S+ + ++P+YS + + AGLF GAEF+ + T+VV
Sbjct: 72 IIAQGVFWVLALIAIGSAVGTIGSQSPVYSAIWFAMSLLGTAGLFFYQGAEFLGVATIVV 131
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
Y GA++V FLF+IM+ R G F I AA I +
Sbjct: 132 YAGAIVVTFLFVIMLAQPSGHSDYDRISWGSAARFLSVIAAATFIGLFT 180
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 31/53 (58%)
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
E V +V +G+ +++++ +E++G +LL++++GAI + ++ +
Sbjct: 268 EPTFVPDVQDRQHVAGLGRYIFSRHLVGVEVAGSLLLVALVGAIAIAIQGKPR 320
>gi|308746028|ref|YP_003934612.1| NADH-plastoquinone oxidoreductase subunit 6 [Cheilanthes
lindheimeri]
gi|302375461|gb|ADL29835.1| NADH-plastoquinone oxidoreductase subunit 6 [Cheilanthes
lindheimeri]
Length = 197
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 5/171 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ L ++ S V+ N S FS F + L+ + A+FVA +V
Sbjct: 6 LIHEFVLALVELGILLGSLGAVSFVNTANSAFSPGSVFTCISLLYFVSNADFVAAAQSLV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-GILAAELIVCASNFMVFSAEGE 120
YVGAV V +F +M+ D G+L + IL + L N F
Sbjct: 66 YVGAVNVLTVFAVMITDEPTGSNVAASGVGYLSASGACAILFSALAYVIHNTKWFDLSFT 125
Query: 121 LSRLV----FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ GNNV+ +G L ++ P E++ +LL++++GAI
Sbjct: 126 NQSGIIMSGIPGNNVQQLGYKLLGEFVVPFELASILLLVALVGAINPARDE 176
>gi|254457280|ref|ZP_05070708.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Campylobacterales bacterium GD 1]
gi|207086072|gb|EDZ63356.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Campylobacterales bacterium GD 1]
Length = 191
Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FYLF+F+ I ++ VT +Y++ +L + + F +LGA+F+ + +VV
Sbjct: 1 MFEAIAFYLFAFLTIAMFYITVTTSQALYALTALAAGMIFISAFFFILGADFLGAVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D EV E + + I A +++ + +V L
Sbjct: 61 YSGAVMALYAFGMMFFDTTREVKEKNGNKYLVTGLAT-ISAILVVLIFAAPIVGDNITAL 119
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ N + IG VL+T+Y P E++ +LL++M+ IVL +
Sbjct: 120 YPVTEGAGNTQEIGIVLFTKYLVPFELAAVMLLVAMVSGIVLAGKK 165
>gi|257852606|gb|ACV71315.1| NADH dehydrogenase subunit 6 [Euphorbia polychroma]
Length = 161
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/157 (31%), Positives = 73/157 (46%), Gaps = 11/157 (7%)
Query: 24 TVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEV 83
+NP++SV I F + +GL LLLG +F AMI VV++GA+ V FLF++MM I I
Sbjct: 1 RAKNPVHSVLFPIPVFRDTSGLLLLLGLDFSAMIFPVVHIGAIAVSFLFVVMMFHIQIAE 60
Query: 84 AEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAEGELSRLVFKGNNVE 132
R S IG++ + + V N+E
Sbjct: 61 IHEEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTQRNTTSLRYTVYAGKVRSWTNLE 120
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+G +LYT Y+ + ILL++MIGAIVL +
Sbjct: 121 TLGNLLYTYYSVWFLVPSLILLVAMIGAIVLTMHRTT 157
>gi|222839810|ref|YP_002587031.1| NADH dehydrogenase subunit 6 [Glomus intraradices]
gi|306960129|ref|YP_003875545.1| NADH dehydrogenase subunit 6 [Glomus irregulare]
gi|222136772|gb|ACM45004.1| NADH dehydrogenase subunit 6 [Glomus intraradices]
gi|306490559|gb|ADM94800.1| NADH dehydrogenase subunit 6 [Glomus irregulare]
Length = 192
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L F+A++S+ V+T NPI +V LI F+ + LLG F+A+ L++Y
Sbjct: 1 MSPFLLELLPFVAVLSAIFVITAVNPILAVLFLIAVFITVSAYLALLGLTFLALSYLIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG--- 119
VGA+ + FLF+IMMLDI + + ++ + + +F +
Sbjct: 61 VGAIAILFLFVIMMLDIKLAELSSSGEEASKVYPIAFLIGTPFLWTLTGSPLFRGDTLYS 120
Query: 120 ------------------ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
+ + L +N+ ++G LYT Y L +G ILLL++IG I
Sbjct: 121 WFDQTTLGIAHISDPSALQWTNLFAAFSNIHSLGVCLYTIYPLWLIYAGIILLLAIIGPI 180
Query: 162 VLMLRHRRDI 171
+L L
Sbjct: 181 ILCLDKTSGS 190
>gi|283953817|ref|ZP_06371348.1| NADH dehydrogenase I chain J [Campylobacter jejuni subsp. jejuni
414]
gi|283794858|gb|EFC33596.1| NADH dehydrogenase I chain J [Campylobacter jejuni subsp. jejuni
414]
Length = 172
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 75/171 (43%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++++L F FS + + + V +N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIENLAFVFFSVVVLGFFGIAVLSKNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E K + I L + +
Sbjct: 61 YSGAVLGLYSFAMMFFDASKEFKEQLKAKKSFFGLVILSAVLLLAMFIGFKYQSVSTDLA 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + + ++++Y E +LL++++ AI L + K
Sbjct: 121 LNDLALFDFNKQLALAIFSKYLLAFEFIAILLLIALVCAITLTHKELTKEK 171
>gi|99034365|ref|ZP_01314389.1| hypothetical protein Wendoof_01000807 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 143
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 6/145 (4%)
Query: 56 MITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
M+ L+VY+GAV V FLF++MMLDID + F + + +I
Sbjct: 1 MMVLIVYIGAVAVLFLFVVMMLDIDYIRLRQGFAKHFTLGAILCGVFFLIISFVIRSSTL 60
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML-RHRRDIKRQ 174
+ ++ + NNV+ IG +LYT Y Y +SG +LL++++GAI L L ++ +K+Q
Sbjct: 61 NISNVIN---YNANNVKAIGNLLYTDYMYAFHLSGILLLVAIVGAIALTLQDKKKGVKKQ 117
Query: 175 DISKQLESNPDNSIVMVKVKSGKGI 199
++ KQL +S+ +VK K GKG+
Sbjct: 118 NVLKQL--TQSSSVKLVKAKFGKGV 140
>gi|212712284|ref|ZP_03320412.1| hypothetical protein PROVALCAL_03370 [Providencia alcalifaciens DSM
30120]
gi|212685030|gb|EEB44558.1| hypothetical protein PROVALCAL_03370 [Providencia alcalifaciens DSM
30120]
Length = 181
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +A++++ V+T NP++++ L+ + + + +F LGA F + ++VY G
Sbjct: 2 EFTFYIAGLVAVLATLRVITNTNPVHALLYLVVSLLALSMVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + ++ + + +++ + + S + +
Sbjct: 62 AIMVLFVFVVMMLNLGRSVQEQERAWLTPKTWIGPAVLSAVLLGILVYGITSLSHQ-DKT 120
Query: 125 VFKGNNVENIGKVLYTQYA 143
+ +G L+ Y
Sbjct: 121 EGAIITAKEVGISLFGPYV 139
>gi|324309718|gb|ADY18499.1| NADH dehydrogenase subunit 6 [Phaeodactylum tricornutum]
Length = 200
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV ++ FY FS +IS+ +VV ++PI+S+ L+ +F+ ++ + LL EF+A++ ++
Sbjct: 1 MVGANVLFYFFSIFLVISAAIVVFSQHPIFSLLFLVLSFLTSSFILFLLECEFLALLFVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV----------CAS 110
VYVGA+ V FLF IMML+ + + F GI + + S
Sbjct: 61 VYVGAIAVLFLFAIMMLEFKLHNLAKTLTKYIPAGIFFGIFSFFPLFQQVSNQFRTNFHS 120
Query: 111 NFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR-HRR 169
+ F+ L+ +V G++LY+ + +G ILL+ +IG + L + +
Sbjct: 121 DSFYFNKYTNWLDLIDATTDVVVYGQILYSYFVLQFLFAGLILLVVLIGVVYLTNNWNNQ 180
Query: 170 DIKRQDISKQLESNPD 185
+ Q I KQL
Sbjct: 181 KVTDQAIFKQLSRTFK 196
>gi|141061|sp|P03883|YMCC_EMENI RecName: Full=Uncharacterized 25.4 kDa protein in COX3 5'region;
AltName: Full=URF-C
gi|12706|emb|CAA30030.1| unnamed protein product [Emericella nidulans]
gi|472821|gb|AAA99206.1| unknown protein [Emericella nidulans]
Length = 228
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 85/194 (43%), Gaps = 35/194 (18%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+F ++I + RNP+ SV LI FVN AG+ +L G ++ + ++VYVGAV +
Sbjct: 35 IFYIISITFGVFTIISRNPVVSVLFLIGLFVNIAGILILAGINYLGLSYILVYVGAVSIL 94
Query: 70 FLFIIMMLDIDIEVAEPRKK-----------------------------------RGFLG 94
FLFI+M+++I I F G
Sbjct: 95 FLFILMLINIRISELLSETNNDIPLAVLTVLLFYYIIGQVLPCNLTDKTIISSLSNRFTG 154
Query: 95 SFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILL 154
+ I I IV + + + + + + + IG ++YT Y+ L IS ILL
Sbjct: 155 IYNIDISNQSSIVGINQEIGYVSSKGWDNTLVEFTQISGIGNIMYTNYSIWLIISSVILL 214
Query: 155 LSMIGAIVLMLRHR 168
L M+GAIV+ ++ +
Sbjct: 215 LGMVGAIVITIKQK 228
>gi|163781780|ref|ZP_02176780.1| NADH dehydrogenase I chain J [Hydrogenivirga sp. 128-5-R1-1]
gi|159883000|gb|EDP76504.1| NADH dehydrogenase I chain J [Hydrogenivirga sp. 128-5-R1-1]
Length = 159
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ F + S V V++P++S+ + A + AG+FL LGAE +A + L++Y A++VF
Sbjct: 5 VLGFWLLASVLGAVLVKSPVHSILFFLSAVLAMAGIFLSLGAELLAGLQLIIYAVAIVVF 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
++ +I + + R + + F +G+ ++ +MV + + N
Sbjct: 65 YVLVITTIPWEKV---KRFEGVYRREFLMGLPVVLVVFALMGYMVLKGKLAQPSEAVQDN 121
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V +GK L+T Y +P E++ ILL++MIGAI+L +
Sbjct: 122 -VRELGKTLFTSYLFPFEVASVILLVAMIGAILLGRKE 158
>gi|261346149|ref|ZP_05973793.1| NADH-quinone oxidoreductase, J subunit [Providencia rustigianii DSM
4541]
gi|282565802|gb|EFB71337.1| NADH-quinone oxidoreductase, J subunit [Providencia rustigianii DSM
4541]
Length = 180
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +A++++ V+T NP++++ L+ + + + +F LGA F + ++VY G
Sbjct: 2 EFTFYIAGLVAVLATLRVITNTNPVHALLYLVVSLLALSMVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + ++ L + +++ + + S +
Sbjct: 62 AIMVLFVFVVMMLNLGRSVQEQERAWLTPKTWIGPSLLSAVLLGILVYGITSISHQEKTE 121
Query: 125 VFKGNNVENIGKVLYTQYA 143
+ +G L+ Y
Sbjct: 122 GV-IITAKEVGISLFGPYV 139
>gi|297569879|ref|YP_003691223.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfurivibrio alkaliphilus AHT2]
gi|296925794|gb|ADH86604.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Desulfurivibrio alkaliphilus AHT2]
Length = 173
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 3/164 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F+ F + I + + N I +V L V AG++ L + F+A++ +++Y GA
Sbjct: 13 VVFFGFILLIIFGALVATNAVNLIRAVCGLALCLVGVAGIYYFLQSPFLALMQVLIYAGA 72
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V V +F +M+ R +R + AA L+ + +
Sbjct: 73 VCVAIVFAVML---AEPQGAKRLERAHPLAGPGAFAAAALMAWGLAALALRTSWPEASSQ 129
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+E++G+ + T + E+ ILL+++IG++VL R RR
Sbjct: 130 VNAGALEDVGRAMMTTFVVSFELISLILLVAIIGSLVLARRGRR 173
>gi|73748697|ref|YP_307936.1| proton-translocating NADH-quinone oxidoreductase, J subunit
[Dehalococcoides sp. CBDB1]
gi|147669456|ref|YP_001214274.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Dehalococcoides sp. BAV1]
gi|289432723|ref|YP_003462596.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Dehalococcoides sp. GT]
gi|73660413|emb|CAI83020.1| proton-translocating NADH-quinone oxidoreductase, J subunit
[Dehalococcoides sp. CBDB1]
gi|146270404|gb|ABQ17396.1| NADH dehydrogenase subunit J [Dehalococcoides sp. BAV1]
gi|288946443|gb|ADC74140.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Dehalococcoides sp. GT]
Length = 160
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F++ + I+S+ LVV V+N +S LI F++ AG+FLLL A+F+A + +++Y+G
Sbjct: 2 EIAFWIIAITCIVSALLVVGVKNIFHSSLWLILCFLSVAGVFLLLSADFLAAVQILIYIG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A+ V + IM+ E ++ + + +M+ S+ S
Sbjct: 62 AISVLIILAIMLTR------EVQRGNLTNKLKIPALFVVTALGGIMTYMLISSNWTSSDA 115
Query: 125 VFKGNNVENIGKVLY--TQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +L+ + + ++G ILL+++IGAIVL+
Sbjct: 116 PPPSTTTAGLADMLFGADGFGLGVLLTGVILLVAIIGAIVLVRDK 160
>gi|300115151|ref|YP_003761726.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Nitrosococcus watsonii C-113]
gi|299541088|gb|ADJ29405.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Nitrosococcus
watsonii C-113]
Length = 261
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/234 (16%), Positives = 85/234 (36%), Gaps = 51/234 (21%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
V+Q + F +F+F++I + + T + S L+ +F+ AGLF+LL A+ +A++ +++
Sbjct: 6 VLQWITFGIFAFISIAGALGMATTMSMFRSGIFLMASFIGVAGLFILLLADLLALLQIMM 65
Query: 62 YVGAVIVFFLFIIMMLD------------------------------------------- 78
Y+G ++V LF+++
Sbjct: 66 YIGGMLVMILFMLLFSGDPGGAMMSTHMRLRGPEWFFSLGLARSPQSKADGNKDDSSPDK 125
Query: 79 --------IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNN 130
+ +L+ + +++ + R + ++
Sbjct: 126 GNHEEEGEKEGNHGNDDMSMFTPVKRAAALLSVGIGALLIALLLWRPHWAVVRQMPDQDS 185
Query: 131 VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
IG +L +Y E +G ++LL + GA++L + Q Q +
Sbjct: 186 PRRIGHLLMDKYMLAFEGAGLLILLGIFGAVMLQRPGKHPDPTQREDLQAAVDA 239
>gi|288803380|ref|ZP_06408813.1| NADH dehydrogenase I, subunit 6 [Prevotella melaninogenica D18]
gi|288334200|gb|EFC72642.1| NADH dehydrogenase I, subunit 6 [Prevotella melaninogenica D18]
Length = 174
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 70/171 (40%), Gaps = 7/171 (4%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + + + + S+ V+ + + + +L+F AGL+ LL F+ + +Y G +
Sbjct: 1 MFAVLAVIILASAVFCVSTKRIMRAATALLFVLFGVAGLYFLLDYTFLGAAQISIYAGGI 60
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRG---FLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
+ ++F I ++ + G FL +F + +I+ V
Sbjct: 61 TMMYIFAIQLVSKRTLQGLSERWLGKRTFLAAFIALVGFGTVILVLLKNQVLRHTVVNGD 120
Query: 124 LVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +E IG+ L T Y P E LL +IG +V++ +++
Sbjct: 121 SLSNEVTMETIGRNLMTANKYGYVLPFEFISVFLLACIIGGLVILNNKKKE 171
>gi|11466850|ref|NP_039447.1| NADH dehydrogenase subunit 6 [Oryza sativa Japonica Group]
gi|50234041|ref|YP_052818.1| NADH dehydrogenase subunit 6 [Oryza nivara]
gi|109156636|ref|YP_654255.1| NADH dehydrogenase subunit 6 [Oryza sativa Indica Group]
gi|68565730|sp|Q6ENA4|NU6C_ORYNI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|148880121|sp|P0C329|NU6C_ORYSA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|148880122|sp|P0C330|NU6C_ORYSI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|148880123|sp|P0C331|NU6C_ORYSJ RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|12053|emb|CAA33908.1| NADH dehydrogenase ND6 [Oryza sativa Japonica Group]
gi|42795528|gb|AAS46095.1| NADH dehydrogenase subunit 6 [Oryza sativa Indica Group]
gi|42795594|gb|AAS46160.1| NADH dehydrogenase subunit 6 [Oryza sativa Japonica Group]
gi|42795658|gb|AAS46223.1| NADH dehydrogenase subunit 6 [Oryza sativa Japonica Group]
gi|46805098|dbj|BAD17337.1| rice chloroplast NADH dehydrogenase ND6 [Oryza sativa Japonica
Group]
gi|46805101|dbj|BAD17340.1| rice chloroplast NADH dehydrogenase ND6 [Oryza sativa Japonica
Group]
gi|49615065|dbj|BAD26848.1| NADH dehydrogenase subunit 6 [Oryza nivara]
gi|290790615|gb|ADD62875.1| NADH-plastoquinone oxidoreductase subunit 6 [Oryza sativa Japonica
Group]
gi|290790684|gb|ADD62943.1| NADH-plastoquinone oxidoreductase subunit 6 [Oryza meridionalis]
gi|290790753|gb|ADD63011.1| NADH-plastoquinone oxidoreductase subunit 6 [Oryza australiensis]
gi|226674|prf||1603356DB NADH dehydrogenase ND6
Length = 176
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 24 TVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEV 83
+ NP +S FSL V + ++LL + FVA+ L++YVGA+ V +F +M ++
Sbjct: 28 LLTNPTFSAFSLGLVLVCISLFYILLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWS 87
Query: 84 AEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKV 137
+ GF I I + + S + + NNV+ IG
Sbjct: 88 KDKNFWTIGDGFTSLVCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIH 147
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLML 165
L T + P E+ ILL+S+IGAI +
Sbjct: 148 LATDFYLPFELISIILLVSLIGAITMAR 175
>gi|288928303|ref|ZP_06422150.1| NADH dehydrogenase I, subunit 6 [Prevotella sp. oral taxon 317 str.
F0108]
gi|288331137|gb|EFC69721.1| NADH dehydrogenase I, subunit 6 [Prevotella sp. oral taxon 317 str.
F0108]
Length = 173
Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + I S+ + V + + + L+F AG++ LL F+ + +
Sbjct: 1 MANIIMFCILAVVIIGSAIVCVFTKRIMRAATFLLFVLFGVAGVYFLLDYTFLGTAQIAI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + + ++F I ++ ++RG + L+ A +
Sbjct: 61 YAGGLTMLYIFAIQLVSKRTLQGLQERQRGKTVVAGALVALIGLVTVALVLLKNQFIDMS 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ +V + IG+ + QY P E LL +IG I++ + +
Sbjct: 121 ASMVDAEVPMSVIGEKIVGAGKYQYVLPFEFISVFLLACIIGGIMIARKEDKK 173
>gi|298373154|ref|ZP_06983144.1| NADH dehydrogenase I, J subunit [Bacteroidetes oral taxon 274 str.
F0058]
gi|298276058|gb|EFI17609.1| NADH dehydrogenase I, J subunit [Bacteroidetes oral taxon 274 str.
F0058]
Length = 172
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
+ +I S + +T ++ + S L+ + AG +L L F+A + + VY G V+V F+
Sbjct: 2 AVAMLIMSVMAITTKSLLRSATYLLLTLICTAGFYLFLNYHFLAAVQVSVYAGGVVVLFV 61
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
F I + EV + R ++ I ++ L+ F S ++
Sbjct: 62 FAIFLTTKKDEVLVKHEYRRYVYGALIALVGIGLVAYTILKTKFIYAANPSMEGDAQLSM 121
Query: 132 ENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQD 175
+IG L Q+ P E+ +LL +++G I++ + ++ ++++
Sbjct: 122 ADIGTALMGTGKYQFLLPFEMLSLLLLAAIVGGILIARKDKKHGEKEE 169
>gi|208435163|ref|YP_002266829.1| NADH-ubiquinone oxidoreductase chain J [Helicobacter pylori G27]
gi|208433092|gb|ACI27963.1| NADH-ubiquinone oxidoreductase chain J [Helicobacter pylori G27]
Length = 166
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+ +V+T N +Y++ +L + V + F LL AEF+ ++ + VYVGAVIV + F +M +
Sbjct: 2 ALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITVYVGAVIVMYAFGMMFFN 61
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEGELSRLVFKGNNVENIGK 136
EV E ++ L + G+ ++ ++ + S + + + + N++ IG
Sbjct: 62 SAAEVIERKQSPKILCALSFGVALLLTLILSAPSIGENLSNQVNSNAIDAQIPNIKAIGY 121
Query: 137 VLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
VL+T Y P E + +LL++M+G I ++
Sbjct: 122 VLFTNYLIPFEAAALMLLVAMVGGIATGIQK 152
>gi|304311503|ref|YP_003811101.1| NADH dehydrogenase, chain J [gamma proteobacterium HdN1]
gi|301797236|emb|CBL45456.1| NADH dehydrogenase, chain J [gamma proteobacterium HdN1]
Length = 153
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
++ RNP++ + +I + + A +F +GA F A + ++VY GA++V F+F++MML++
Sbjct: 3 MLFSRNPVHGLLYMIVSLLAVAMVFFAVGAPFAAALEMIVYAGAIMVLFVFVVMMLNLGG 62
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ 141
EV + ++ + + + +++ ++ + + + + +G +L+
Sbjct: 63 EVELLERVWLQPRTWVLPAVLSAVVLVQLVSFLWD---SAPSIAGQEVSPKQVGILLFGP 119
Query: 142 YAYPLEISGFILLLSMIGAIVLMLRH 167
Y +E++ ILL +++ A+ L R
Sbjct: 120 YLLAVELASMILLGALVVALHLGRRE 145
>gi|270308200|ref|YP_003330258.1| NADH:quinone oxidoreductase subunit 6 (chain J) [Dehalococcoides
sp. VS]
gi|270154092|gb|ACZ61930.1| NADH:quinone oxidoreductase subunit 6 (chain J) [Dehalococcoides
sp. VS]
Length = 160
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F++ + I S+ LVV V+N +S LI F++ AG+FLLL A+F+A + +++Y+G
Sbjct: 2 EIAFWIIAITCIASALLVVGVKNIFHSSLWLILCFLSVAGVFLLLSADFLAAVQILIYIG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A+ V + IM+ E ++ + ++ +M+ S+ S
Sbjct: 62 AISVLIILAIMLTR------EVQRGNLTNKLKIPALFVVTVLGGVMTYMLISSNWTSSDA 115
Query: 125 VFKGNNVENIGKVLYTQ--YAYPLEISGFILLLSMIGAIVLMLRH 167
+ ++L+ + + I+G ILL+++IGAIVL+
Sbjct: 116 PAPSTTTAGLAEMLFGSDGFGLGVLITGVILLVAIIGAIVLVRDK 160
>gi|242278967|ref|YP_002991096.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
salexigens DSM 2638]
gi|242121861|gb|ACS79557.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
salexigens DSM 2638]
Length = 174
Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 3/172 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F +++ + + + V + + ++ LI + + AG+++L+ A F+A + +++
Sbjct: 4 TLAKIAFVVYTLLILGGGCIAVGAHSLVRAMVGLISSLLGVAGMYMLMAAPFMAFMQILI 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGAV V F IM+ D E +R G + L V F++ +
Sbjct: 64 YVGAVCVLIFFAIMLTQADDHGVEAGSRR--PGKSALAALTFIAPVFVIGFILIKFQPVS 121
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + +E IGK L Y E+ +LL +M GA++L + R
Sbjct: 122 IHIPVEVPLIE-IGKGLLEDYPVAFELISVVLLAAMAGAVLLAFEQKGKKGR 172
>gi|207108911|ref|ZP_03243073.1| NADH dehydrogenase subunit J [Helicobacter pylori HPKX_438_CA4C1]
Length = 166
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 2/151 (1%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+ +V+T N +Y++ +L + V + F LL AEF+ ++ + VYVGAVIV + F +M +
Sbjct: 2 ALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITVYVGAVIVMYAFGMMFFN 61
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEGELSRLVFKGNNVENIGK 136
EV E ++ L + G+ ++ ++ + S + + + + N++ IG
Sbjct: 62 SAAEVIERKQSPKILCALSFGVALLLTLILSAPSIGENLSRQVNSNAIDAQIPNIKAIGY 121
Query: 137 VLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
VL+T Y P E + +LL++M+G I ++
Sbjct: 122 VLFTNYLIPFEAAALMLLVAMVGGIATGIQK 152
>gi|58578649|ref|YP_203369.1| NADH dehydrogenase subunit 6 [Mortierella verticillata]
gi|57545582|gb|AAW51706.1| NADH dehydrogenase subunit 6 [Mortierella verticillata]
Length = 200
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 33/199 (16%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M ++ L +F +++S+ LV+T R+P+ SV LI F+N AG +LLG F+A+ ++VY
Sbjct: 1 MNNILLDLLTFTSVLSAILVITARSPVISVLFLIAVFINIAGYLILLGVNFIALSYIMVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS------------ 110
+GA+ + FLF+IMML++ + ++AA L
Sbjct: 61 IGAIAILFLFVIMMLNVRLTELHEIGSDYSKNFPLAIVVAASLSYIILSNSLTKSIDQIY 120
Query: 111 ---------------------NFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEIS 149
N++ + + ++ IG ++Y+ Y L +
Sbjct: 121 LITALFDKLNFLNSGINTTTDNYINIGYNTIYNNIFVNYEQIQAIGNIMYSSYGLYLILC 180
Query: 150 GFILLLSMIGAIVLMLRHR 168
F+LLL+M+G I++ L +
Sbjct: 181 SFVLLLAMLGPIIITLDKK 199
>gi|146277736|ref|YP_001167895.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Rhodobacter
sphaeroides ATCC 17025]
gi|145555977|gb|ABP70590.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Rhodobacter
sphaeroides ATCC 17025]
Length = 164
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 4/167 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L + +A+ + L VT ++++ L+ A ++ AG F LGA F + +++Y
Sbjct: 1 MSDLSAIWCASVALACAILAVTRPAIVHALIWLVAALLSLAGCFFALGAGFAGAVQILIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++ F+F++M D E + R G + + + ++ +
Sbjct: 61 AGAIVAVFVFVVMTADASPEALARERARLAQGWRRPAAAVGLVALPLALGLLAGGTSPAA 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
++G +L+ +A +E++ +LL +++GA L R
Sbjct: 121 APDSGP----SLGAILFGPWAVAVEVASGLLLAALMGARHLGRRREE 163
>gi|57234301|ref|YP_181654.1| proton-translocating NADH-quinone oxidoreductase, J subunit
[Dehalococcoides ethenogenes 195]
gi|57224749|gb|AAW39806.1| proton-translocating NADH-quinone oxidoreductase, J subunit
[Dehalococcoides ethenogenes 195]
Length = 160
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F++ + I S+ LVV V+N +S LI F++ AG+FLLL A+F+A + +++Y+G
Sbjct: 2 EIAFWIIAITCIASALLVVGVKNIFHSSLWLILCFLSVAGVFLLLSADFLAAVQILIYIG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A+ V + IM+ E ++ + + +M+ S+ S
Sbjct: 62 AISVLIILAIMLTR------EVQRGNLTNKLKIPALAVVTALGGIMTYMLISSNWTSSDA 115
Query: 125 VFKGNNVENIGKVLYTQ--YAYPLEISGFILLLSMIGAIVLMLRH 167
+ ++L+ + + I+G ILL+++IGAIVL+
Sbjct: 116 PAPSTTTAGLAEMLFGSDGFGLGVLITGVILLVAIIGAIVLVRDK 160
>gi|183599628|ref|ZP_02961121.1| hypothetical protein PROSTU_03115 [Providencia stuartii ATCC 25827]
gi|188021880|gb|EDU59920.1| hypothetical protein PROSTU_03115 [Providencia stuartii ATCC 25827]
Length = 181
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +A++++ V+T NP++++ L+ + + + +F LGA F + ++VY G
Sbjct: 2 EFTFYIAGLVAVLATLRVITNTNPVHALLYLVVSLLALSMVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + +IG ++ A ++ +
Sbjct: 62 AIMVLFVFVVMMLNLGRSVQEQE-REWLAPKNWIGPALLSAVLLALLVYGITSLSYQDGI 120
Query: 125 VFKGNNVENIGKVLYTQYA 143
+ + + L+ Y
Sbjct: 121 TGTVISAKEVAISLFGPYV 139
>gi|182412301|ref|YP_001817367.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Opitutus
terrae PB90-1]
gi|177839515|gb|ACB73767.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Opitutus
terrae PB90-1]
Length = 169
Score = 74.7 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 3/164 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M S F +F +A+I++ V RN + + + + + GLF++L A +A + L+VY
Sbjct: 1 MASFLFNVFVLLAVIAALGAVLNRNTVNAAMCFMLSLIGVTGLFVMLEAYLLAFVLLLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV FLFI+M+LD PR+ LG F + A L V
Sbjct: 61 AGAVAALFLFIVMLLDTHTTKVRPRR---PLGMFATLVSVALLAVGVLTLYQAPGLAAAP 117
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
G +++ L+T Y P++I GF+LL++M+G IVL +
Sbjct: 118 VPTAVGASLKVYAYELFTTYLLPVQIVGFLLLIAMLGVIVLSKK 161
>gi|281419768|ref|ZP_06250767.1| NADH dehydrogenase I, subunit 6 [Prevotella copri DSM 18205]
gi|281406144|gb|EFB36824.1| NADH dehydrogenase I, subunit 6 [Prevotella copri DSM 18205]
Length = 175
Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 61/173 (35%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
F + + + + S+ + V + + + L+F AG+F LL ++ + V
Sbjct: 3 TANLFMFVILAVVILGSAIMCVFTKRIMRAATFLLFVLFGVAGMFFLLDYTYLGAAQISV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + + ++F I ++ +G + + A +
Sbjct: 63 YAGGITMLYVFAIQLVSKRTLQGLVEHVKGSRIVGRALVCLVGFVTLAVIVLKNHFIDMA 122
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + ++ +G L Y P E LL +IG I++ + +
Sbjct: 123 ATVADTEVPMDQVGSALVGADKYGYVLPFEFISVFLLACIIGGILIARKEDKK 175
>gi|288801148|ref|ZP_06406604.1| NADH dehydrogenase I, subunit 6 [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332082|gb|EFC70564.1| NADH dehydrogenase I, subunit 6 [Prevotella sp. oral taxon 299 str.
F0039]
Length = 174
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 70/174 (40%), Gaps = 5/174 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + + S+ + VT + + + L+F AG++ LLG F+ + +
Sbjct: 1 MANLIMFCILAVIILGSAIVCVTTKRIMRAATFLLFVLFGVAGIYFLLGYTFLGAAQISI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + + ++F I ++ + + L++ F G +
Sbjct: 61 YAGGITMVYIFAIQLVSKRTLQGLQESFSLKKSLGGVLVALVGLVMFLVIFAKNEFIGNV 120
Query: 122 SRL-VFKGNNVENIGKVLY----TQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L + ++ +G L QYA P E+ LL +IG +++ + +
Sbjct: 121 VDLGLANEVSMHEVGTTLIGTDKGQYALPFELISVFLLACIIGGVMIARKEDKK 174
>gi|323148957|ref|YP_004222511.1| NADH-plastoquinone oxidoreductase subunit 6 [Smilax china]
gi|308742648|gb|ADO33499.1| NADH-plastoquinone oxidoreductase subunit 6 [Smilax china]
Length = 176
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDVLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + R G IL + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYSNDSRLWTIGDGVTSLVCTSILFSLITTIPDTSWYGILWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +NV+ IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TKSNQILEQDLISNVQQIGIHLSTDFYLPFELISIILLVSLIGAITMAR 175
>gi|81176304|ref|YP_398381.1| NADH dehydrogenase subunit 6 [Lactuca sativa]
gi|122212008|sp|Q332S4|NU6C_LACSA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|78675222|dbj|BAE47648.1| NAD(P)H-quinone oxidoreductase chain 6 [Lactuca sativa]
gi|88657035|gb|ABD47285.1| NADH-plastoquinone oxidoreductase subunit 6 [Lactuca sativa]
Length = 176
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
NPIYS FSL FV + ++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 31 NPIYSAFSLGLVFVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFINGSEYSKDF 90
Query: 87 RKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVLYT 140
G + + + + + + + +N + IG L T
Sbjct: 91 HLWTVGDGITSVVCTSLFVSLITTIPDTSWYGIIWTTKANQIIEQDLISNSQQIGIHLST 150
Query: 141 QYAYPLEISGFILLLSMIGAIVLML 165
+ P E ILL+++IGAI +
Sbjct: 151 DFFLPFEFISIILLVALIGAIAVAR 175
>gi|77463680|ref|YP_353184.1| NADH dehydrogenase I chain J [Rhodobacter sphaeroides 2.4.1]
gi|77388098|gb|ABA79283.1| NADH dehydrogenase I chain J [Rhodobacter sphaeroides 2.4.1]
Length = 164
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 4/167 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L + +A+ S+ L VT ++++ L+ A ++ AG F LGA F + +++Y
Sbjct: 1 MSDLVAVWCASVALASAILAVTRPAIVHALIWLVAALLSLAGSFFALGASFAGAVQILIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++ F+F++M D E + R G A + V ++ +
Sbjct: 61 AGAIVAVFVFVVMTADASPEALARERARLSAGWKRPAAAVALVAVPLVLGLLTRTSAPEA 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+G +L+ +A +E++ +LL +++GA L R
Sbjct: 121 APATGAG----LGAILFGPWALAVEVASGLLLAALMGARHLGRRREE 163
>gi|212550779|ref|YP_002309096.1| NADH dehydrogenase I subunit J [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212549017|dbj|BAG83685.1| NADH dehydrogenase I subunit J [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 173
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 4/170 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
V+ + F +++ S L V+ + + S L + AG +L L F+A + + V
Sbjct: 4 VVNLIIFICLGIASLLFSILAVSSNSLLRSATYLFLVLLCTAGFYLFLNYHFLAAVQVSV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V F+F I + + EV + + S + + A F +
Sbjct: 64 YAGGIVVLFIFAIFLTNDKSEVLIKKWWQRCTMSVLVILGGIATTAFALLKHRFIYINKS 123
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ ++ IGK L QY P EI +LL +IGAI++ +
Sbjct: 124 MLEGDREIDMHLIGKALMGTGKYQYLLPFEILSLLLLACIIGAILIARKR 173
>gi|75755712|ref|YP_319816.1| NADH dehydrogenase subunit 6 [Acorus calamus]
gi|161622362|ref|YP_001586234.1| NADH dehydrogenase subunit 6 [Acorus americanus]
gi|122217394|sp|Q3V4Y1|NU6C_ACOCL RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|221272304|sp|A9LYF3|NU6C_ACOAM RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|74381762|emb|CAI53847.1| NADH dehydrogenase ND6 subunit [Acorus calamus]
gi|156573645|gb|ABU85156.1| NADH-plastoquinone oxidoreductase subunit 6 [Acorus americanus]
gi|160369905|gb|ABX38796.1| NADH-plastoquinone oxidoreductase subunit 6 [Acorus americanus]
Length = 177
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDVLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGAV V +F +M ++ + G IL + +
Sbjct: 67 VGAVNVLIIFAVMFMNGSDYSNDFYLWTVGDGVTSLVCTSILFSLITTILDTSWYGIIWN 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +NV+ IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TGSNQIVEQDLTSNVQQIGIHLSTDFYLPFELVSIILLVALIGAITMAR 175
>gi|306486042|gb|ADM92668.1| NADH-plastoquinone oxidoreductase subunit 6 [Davidia involucrata]
Length = 176
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + ++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVLY 139
G I + + S + + + + + IG L
Sbjct: 90 FHLWTVGDGVTSLVCTSIFVSLITTILDTSWYGIIWTTRSNQIMEQDLISNSQQIGIHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+++IGAI +
Sbjct: 150 TDFFLPFELISIILLVALIGAIAIAR 175
>gi|237809388|ref|YP_002893828.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Tolumonas
auensis DSM 9187]
gi|237501649|gb|ACQ94242.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Tolumonas
auensis DSM 9187]
Length = 175
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 4/139 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L FY S +AI+++ V+T NP++++ LI + + +F LGA FV + ++VY G
Sbjct: 2 ELAFYGSSVVAILATLGVITGTNPMHALLYLIVSLIAVGMIFFSLGASFVGAMQVIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + R+ + IL+A + + G +
Sbjct: 62 AIMVLFVFVVMMLNLGTAQEQERQWLRPITWIGPLILSAGQMAVFYAAL----HGVPGII 117
Query: 125 VFKGNNVENIGKVLYTQYA 143
+ + +G LY Y
Sbjct: 118 TGEPITAKQVGIALYGPYV 136
>gi|167042387|gb|ABZ07114.1| putative NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[uncultured marine crenarchaeote HF4000_ANIW97P9]
Length = 171
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F + + I+S+ + +R+ IY +L+ AG F+LL + FVA+ + VY
Sbjct: 1 MVDSLFLGIAVLTIVSAIAALEMRSLIYGGIALMGTLGGIAGFFILLDSPFVALFQIAVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VG++ V LF IM++ ++ + + GI +++ + ++F++
Sbjct: 61 VGSIAVLILFTIMLVKNELIFQKKE----DPKRRYAGIALMLILMISLGAVIFNSGLSSI 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + IG+ Y L +L S+ GA++L R
Sbjct: 117 TTEEPPVDYKEIGEDFLIYYWPALIAMALVLAGSITGAMILARRQ 161
>gi|122202878|sp|Q2QD38|NU6C_CUCSA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|74027151|gb|AAZ94701.1| NADH dehydrogenase subunit 6 [Cucumis sativus]
gi|115432853|gb|ABI97466.1| NADH-plastoquinone oxidoreductase subunit 6 [Cucumis sativus]
gi|115498355|gb|ABI98797.1| NADH-plastoquinone oxidoreductase subunit 6 [Cucumis sativus]
Length = 176
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ L I+ S V+ N IYS FSL V+ + ++L A+FVA L++Y
Sbjct: 7 IHDFLVVLLGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS---FFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M + + G I + +
Sbjct: 67 VGAINVLIIFAVMFMKGSEYSKDFNLWTVGNGVTFLVCTSIFVSLMTTIVDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL ++IGAI +
Sbjct: 127 TRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVAR 175
>gi|290489850|gb|ADD31332.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Ilex cornuta]
Length = 177
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G I + + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGVTSIVCTSLFVSLMTTIPDTSWHGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ +N + IG L T + P E+ ILL+++IGAI + +
Sbjct: 127 TKSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVARQQ 177
>gi|148656358|ref|YP_001276563.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Roseiflexus
sp. RS-1]
gi|148568468|gb|ABQ90613.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Roseiflexus
sp. RS-1]
Length = 169
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 85/162 (52%), Gaps = 4/162 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + F + + +AI + ++ N I+S L+ FV + L++LL A F+ +I L+VY
Sbjct: 1 MELVIFLITAVVAIAGAVAMLLSPNAIHSAIFLLINFVAISVLYVLLYAPFLFVIQLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA+IV FLF++M+L + + F +G+ A +++ ++ +
Sbjct: 61 AGAIIVLFLFVVMLLGAERA---EDTRERFAWQRPLGVSLAAILLGLLGYLALRNPSAGA 117
Query: 123 RLVFK-GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVL 163
+ + E I + L+T Y P EI+ F+LL +++G +VL
Sbjct: 118 TVADQHFAAPERIAEALFTTYLLPFEITAFLLLAAIVGVVVL 159
>gi|298246360|ref|ZP_06970166.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Ktedonobacter
racemifer DSM 44963]
gi|297553841|gb|EFH87706.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Ktedonobacter
racemifer DSM 44963]
Length = 174
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 7/173 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M L F + + + S+ V+ +N +YS SLI A +L LGA F+A++ ++
Sbjct: 1 MTPTILAFAVLAVASAASAIGVIAFKNAVYSALSLILTLFFLAMFYLQLGAMFIAVVQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRG------FLGSFFIGILAAELIVCASNFMV 114
+Y GA++V FLF++ ML D + + LG +G L+ + S
Sbjct: 61 IYAGAIMVLFLFVVTMLTSDAQDKGEDRIPWQRYVGSLLGVVLVGALSYLIFKNVSGSPT 120
Query: 115 FSAEGE-LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
GE S V NVE G L+ Y +P E++ +++++++GA+V R
Sbjct: 121 VLKAGESYSHAVATHGNVEAFGLALFHGYLFPFEVTSLLIVVAILGALVFGRR 173
>gi|322422447|ref|YP_004221873.1| NADH dehydrogenase subunit 6 [Penicillium digitatum]
gi|316891701|gb|ADU57309.1| NADH dehydrogenase subunit 6 [Penicillium digitatum]
Length = 216
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 36/195 (18%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ ++I+ L ++ RNP+ SV LI FVN AGL +L+G F+ + ++VYVGAV +
Sbjct: 22 IIYLVSILLGILTISSRNPVVSVLFLIGLFVNVAGLLILVGYNFLGLAYILVYVGAVSIL 81
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF----------------- 112
FLFI+M+++I + + I+ ++
Sbjct: 82 FLFILMLINIRVSELFNDTNNDLPLASLTIIIFYYIMAQVLPLNFTENSIVCYLSNSYSD 141
Query: 113 -------------------MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ +++ + + +V +IG ++YT Y+ L ++ IL
Sbjct: 142 IYNVQLDNELFNIVDLKQQISYASSKGWDNSLIEPTHVASIGNIMYTSYSMWLIVTSIIL 201
Query: 154 LLSMIGAIVLMLRHR 168
LL M+GAIV+ ++ +
Sbjct: 202 LLGMVGAIVITIKQK 216
>gi|268591143|ref|ZP_06125364.1| NADH-quinone oxidoreductase, J subunit [Providencia rettgeri DSM
1131]
gi|291313369|gb|EFE53822.1| NADH-quinone oxidoreductase, J subunit [Providencia rettgeri DSM
1131]
Length = 180
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ L+ + + + +F LGA F + ++VY G
Sbjct: 2 EFTFYIAGLVAILATLRVITNTNPVHALLYLVVSLLALSMVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + ++ + + +++ + + S + +
Sbjct: 62 AIMVLFVFVVMMLNLGRSVQEQERAWLTPKNWIGPAVLSAVLLAILVYGITSLSYQE-GI 120
Query: 125 VFKGNNVENIGKVLYTQYA 143
+ +G L+ Y
Sbjct: 121 EGTIIGAKEVGISLFGPYV 139
>gi|157816261|ref|YP_001492832.1| NADH dehydrogenase subunit 6 [Tilletia indica]
gi|187373139|ref|YP_001876482.1| ND6 [Tilletia walkeri]
gi|115361454|gb|ABI95820.1| NADH dehydrogenase subunit 6 [Tilletia indica]
gi|144925994|gb|ABP03928.1| ND6 [Tilletia walkeri]
Length = 294
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 55/105 (52%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + + AI S LV+T +NP+ SV LI FVN AG +LLG F+ + L+VY
Sbjct: 1 MNNFLLDFLAIRAIFSGILVITSKNPVISVLFLISVFVNIAGYLILLGVGFIGISYLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
VGA+ + FLF++MML++ I K I+ + I
Sbjct: 61 VGAIAILFLFVVMMLNLQIAELSSIGKEYTQNIPLGTIIRSLFIF 105
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+E+IG +LYT + L ++ ILLL+MIG I L + ++
Sbjct: 238 IHMRFYQYPQFTNFIQIESIGYLLYTNNRFWLILTSVILLLAMIGPITLSISNKNR 293
>gi|292385516|gb|ADE22060.1| NADH dehydrogenase subunit 6 [Lessonia tholiformis]
gi|292385520|gb|ADE22063.1| NADH dehydrogenase subunit 6 [Lessonia tholiformis]
Length = 311
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI S+
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVFFLIAVISS 110
>gi|288926083|ref|ZP_06420011.1| NADH dehydrogenase I, subunit 6 [Prevotella buccae D17]
gi|315608356|ref|ZP_07883345.1| NADH dehydrogenase I subunit 6 [Prevotella buccae ATCC 33574]
gi|288337123|gb|EFC75481.1| NADH dehydrogenase I, subunit 6 [Prevotella buccae D17]
gi|315249986|gb|EFU29986.1| NADH dehydrogenase I subunit 6 [Prevotella buccae ATCC 33574]
Length = 173
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 62/170 (36%), Gaps = 4/170 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + + S+ + V + + + L+F AG++ LL F+ + V
Sbjct: 1 MANIVMFCILAAVILGSAVMCVMTKRIMRAATFLLFVLFGVAGIYFLLDYTFLGTAQIAV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G + + ++F I ++ + +G + L +
Sbjct: 61 YAGGITMVYIFAIQLVSKQTLQGVVERFKGSRVLGGAVVSLVGLATVVVVLLKNRFIDFA 120
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
++ + IG L QY P E LL +IG I++ +
Sbjct: 121 AQSAVGEIPMNTIGTALLGSEKYQYVLPFEFISVFLLACIIGGIMIARKE 170
>gi|195953126|ref|YP_002121416.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Hydrogenobaculum sp. Y04AAS1]
gi|195932738|gb|ACG57438.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Hydrogenobaculum sp. Y04AAS1]
Length = 165
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 87/165 (52%), Gaps = 3/165 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ L F + S +AI+S+ + V++PI+ + + ++ A F L A+ +A + LV+Y
Sbjct: 1 MELLVFVVISIIAIVSALGAILVKSPIHVMVWFLGFILSVAASFFALKADLLAGLQLVIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
A++VF++ +I + + + + F + A + AS ++V S+
Sbjct: 61 AVAIVVFYVLVITTIPWEKV---KMFEGFYKKEFVFALPAFLFTIGASIYLVISSRFSNL 117
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
R +NV +G VL+T+Y P E++ FILL++MIGAI+
Sbjct: 118 RQPLPKDNVSALGTVLFTKYIAPFELASFILLIAMIGAIIFGKEK 162
>gi|24213588|ref|NP_711069.1| NADH dehydrogenase (ubiquinone) chain J [Leptospira interrogans
serovar Lai str. 56601]
gi|24194380|gb|AAN48087.1| NADH dehydrogenase (ubiquinone) chain J [Leptospira interrogans
serovar Lai str. 56601]
Length = 233
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 83/215 (38%), Gaps = 52/215 (24%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q L F+LF+ + I+SS V+ NPI + L+ +F + A ++ ++ A F+A + L+VY
Sbjct: 8 QLLLFFLFASVMILSSLGVIFHPNPITAAVLLVLSFFSLAAIYAVMNAIFIATMQLLVYA 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM---------- 113
GA++V +F++M+L + + + L L V +
Sbjct: 68 GAIMVLVVFVLMLLSLRDDAPRFFIFEKPIKKLLYLGLVMFLGVLLITAVQDGIPSETTV 127
Query: 114 ------------------------------------------VFSAEGELSRLVFKGNNV 131
E + +++ N
Sbjct: 128 PIGYAQNKDGKFVGYSFQISKNIKQTNTKSTLETPKTTSENQNHVHEKDTDQIILTSGNT 187
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+G ++ +Y P E+ +LL +++GA+VL +
Sbjct: 188 AAVGSAMFLRYLLPFELISILLLAAVLGAVVLGKK 222
>gi|114177209|gb|ABI53762.1| NADH dehydrogenase subunit 6 [Placozoan sp. BZ10101]
Length = 235
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 62/223 (27%)
Query: 4 QSLFFYLFSFMAIISSFLVVT---------------VRNPIYSVFSLIFAFVNAAGLFLL 48
+ + F + S + +I++ + + N + SVF LI F+ ++GLF++
Sbjct: 8 EDILFIILSSITVIAAIMTIRGGIGNPTTTAVTPTNTNNFLTSVFWLILTFIGSSGLFIV 67
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV- 107
LG EF+ +I L+VYVGA+ + FLF+IMM+ + E + + G +G+ IGIL ++
Sbjct: 68 LGMEFLGLIFLIVYVGAICIIFLFVIMMIPGEKERKKGE-ETGRIGTPAIGILIGGILAA 126
Query: 108 ---------------------------------------------CASNFMVFSAEGELS 122
+ + + L+
Sbjct: 127 ELASAVPDSIIKNYELTNILSDRNRDKSGLIGSEKESITTGIKNNIETGYPYDYFDYFLT 186
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
G N+E IGKVLY Y Y + FILL++MIGAIVL L
Sbjct: 187 LNGSGGTNMEAIGKVLYINYYYAFILVSFILLVAMIGAIVLGL 229
>gi|114804316|ref|YP_762313.1| NADH-plastoquinone oxidoreductase subunit 6 [Morus indica]
gi|122166758|sp|Q09WW5|NU6C_MORIN RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|78100368|gb|ABB21009.1| NADH-plastoquinone oxidoreductase subunit 6 [Morus indica]
Length = 176
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + L++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLLYILSNSYFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVLY 139
GF I + S + + + + + IG L
Sbjct: 90 FNLWTVGNGFTLLICTSIFGLLITTITDTSWYGIIWTTRSNQIIEHDLISNSQQIGIHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E ILL ++IGAI +
Sbjct: 150 TDFFLPFEFISIILLAALIGAITVAR 175
>gi|126462512|ref|YP_001043626.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Rhodobacter
sphaeroides ATCC 17029]
gi|126104176|gb|ABN76854.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Rhodobacter
sphaeroides ATCC 17029]
Length = 164
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L + +A+ S+ L VT ++++ L+ A ++ AG F LGA F + +++Y
Sbjct: 1 MSDLVAVWCASVALASAILAVTRPAIVHALIWLVAALLSLAGSFFALGASFAGAVQILIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++ F+F++M D E + R G A + V ++ A +
Sbjct: 61 AGAIVAVFVFVVMTADASPEALARERARLSAGWKRPAAAVALVAVPLVLGLLTRASAPEA 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+G +L+ +A +E++ +LL +++GA L R
Sbjct: 121 APATGAG----LGAILFGPWALAVEVASGLLLAALMGARHLGRRREE 163
>gi|300723698|ref|YP_003713005.1| NADH dehydrogenase I subunit J [Xenorhabdus nematophila ATCC 19061]
gi|297630222|emb|CBJ90873.1| NADH dehydrogenase I chain J [Xenorhabdus nematophila ATCC 19061]
Length = 175
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 83/166 (50%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFTFYVAGLVAILATLRVITHTNPVHALLYLIISLLALSVVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + ++ + + +++ + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGKSVVEQERLWLQPRAWIGPSILSIVLLIVLAYAISTLPPVK--I 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +G L+ Y +E++ +LL ++ A + R+
Sbjct: 120 AGEVVSAREVGISLFGPYVLAVELASLLLLAGLVVAYHIGRESRQG 165
>gi|290489880|gb|ADD31347.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Plumbago
auriculata]
Length = 176
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
V+ NPI+S FSL F + + ++L ++FVA L++YVGA+ V LF +M ++
Sbjct: 26 VIFFTNPIFSAFSLGFVLLCISLFYILENSQFVASAQLLIYVGAINVLILFAVMFINDSE 85
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIG 135
+ G + + +++ S + + NN + IG
Sbjct: 86 YDKDFHFWTIGDGITSLICTSLFVLLITSILNTSWYGIVWTTRLNHIVEQDLINNSQQIG 145
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
L T + P E+ ILL+++IGAI +
Sbjct: 146 IHLSTDFFLPFELISIILLVALIGAITVAR 175
>gi|261416520|ref|YP_003250203.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372976|gb|ACX75721.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302327558|gb|ADL26759.1| NADH-quinone oxidoreductase, J subunit [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 180
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 1/167 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ ++F + + +A+ S+ V+ R+P+Y SL+ + V+ AG++ LLG+ F+ ++ ++V
Sbjct: 1 MLALIYFIVLAVIAVGSAVCVLLSRHPLYGALSLVASMVSLAGIYGLLGSPFLGVVQIMV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA+++ F+IM+L+ + P + L I+ A L+ A + +
Sbjct: 61 YAGAIMMLLTFVIMVLNGARDSHTPMFDKVSLFVIPAVIVLAGLVGFALVRAPIAFDAAT 120
Query: 122 SRLVFKGNNVENIGKVLYTQ-YAYPLEISGFILLLSMIGAIVLMLRH 167
R + Y E+ G +LL +M A++L +
Sbjct: 121 VRGSVAITSKTLFDVAQSGPGYFVLFEVLGVLLLSAMGAAVLLAKKR 167
>gi|294674395|ref|YP_003575011.1| proton-translocating NADH-quinone oxidoreductase J subunit
[Prevotella ruminicola 23]
gi|294473669|gb|ADE83058.1| putative proton-translocating NADH-quinone oxidoreductase, J
subunit [Prevotella ruminicola 23]
Length = 171
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 68/172 (39%), Gaps = 6/172 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ ++ F + + I S+ + VT + + ++F AG++ LL F+ + V
Sbjct: 1 MGNTVMFIILAVFIIASALMCVTTTKIMRAATFMLFVLFGVAGIYFLLDYTFLGAAQISV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G V + ++F I ++ + ++R G LAA + ++
Sbjct: 61 YAGGVTMIYVFAIQLV--SKRTLQGLEERVKSSKMITGALAALAGLVVVGLILLKTGFYT 118
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ ++ IG L QY P E LL +IG +V+ + +
Sbjct: 119 QEIAGVEVPMKEIGTALVGSGKYQYVLPFEFISVFLLACIIGGLVVARKEDK 170
>gi|145592967|ref|YP_001157264.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Salinispora
tropica CNB-440]
gi|145302304|gb|ABP52886.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Salinispora
tropica CNB-440]
Length = 187
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 16 IISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIM 75
+ S L V R+ + + L+ AG++L+L AE VA + +++YVGAV+V LF +M
Sbjct: 16 VGSGALAVATRHLVRAGLYLVVCLAAVAGMYLVLTAELVAWVQVLIYVGAVVVLLLFAVM 75
Query: 76 MLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIG 135
+ I + + G+ + G L + + S + + E IG
Sbjct: 76 LTRAPIGASTDLDRPGWPAALIGGGTGLGLAALLVDAYRW-----SSVPLPTAGSAERIG 130
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ ++ + P E+ +LL +++GAI+L
Sbjct: 131 EQIFGSWVLPFEVLSVLLLAALVGAIILSR 160
>gi|290489858|gb|ADD31336.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Nerium
oleander]
Length = 176
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M I+ VV + NPIYS FSL V + ++LL + FVA L++Y
Sbjct: 7 MHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCISLFYILLSSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF +M + + R G + + + + + +
Sbjct: 67 VGAVNVLILFAVMFMSGSEYYKDSRLWTVGDGVTSMVCTSLFISLITTIPDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQVLEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|52220864|ref|YP_087019.1| NADH dehydrogenase subunit 6 [Panax ginseng]
gi|75254100|sp|Q68RV3|NU6C_PANGI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|51235367|gb|AAT98563.1| NADH dehydrogenasesubunit 6 [Panax ginseng]
Length = 176
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V LF +M ++ + G I + +
Sbjct: 67 VGAINVLILFAVMFMNGSEYYKDFHLWTIGDGVTSMVCTSIFVSLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|317123874|ref|YP_004097986.1| NADH dehydrogenase subunit J [Intrasporangium calvum DSM 43043]
gi|315587962|gb|ADU47259.1| NADH dehydrogenase subunit J [Intrasporangium calvum DSM 43043]
Length = 172
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 3/147 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F + + + + L VT + +++ L+ + AG +++LG E V ++ L+
Sbjct: 1 MTSREIAFLIVGTITALCAILAVTTKQVVHAALWLLVSLGALAGAYVVLGQELVGIVQLL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGA++V LF +M+ I + + A A V
Sbjct: 61 VYVGAIVVLVLFALMLTRAPIGRHSEIDTPRWERVLASALGGA---TTALLAAVLLPMFA 117
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLE 147
+RL IG+ ++ + +P E
Sbjct: 118 SARLAEDAPATPAIGEAIFGTWVWPFE 144
>gi|332558536|ref|ZP_08412858.1| NADH dehydrogenase I chain J [Rhodobacter sphaeroides WS8N]
gi|332276248|gb|EGJ21563.1| NADH dehydrogenase I chain J [Rhodobacter sphaeroides WS8N]
Length = 164
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 4/167 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L + +A+ S+ L VT ++++ L+ A ++ AG F LGA F + +++Y
Sbjct: 1 MSDLVAVWCASVALASAILAVTRPAIVHALIWLVAALLSLAGSFFALGASFAGAVQILIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++ F+F++M D E + R G A + V ++ +
Sbjct: 61 AGAIVAVFVFVVMTADASPEALARERARLSAGWKRPAAAVALVAVPLVLGLLARTSAPEA 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+G +L+ +A +E++ +LL +++GA L R
Sbjct: 121 APATGAG----LGAILFGPWALAIEVASGLLLAALMGARHLGRRREE 163
>gi|303237642|ref|ZP_07324202.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
disiens FB035-09AN]
gi|302482094|gb|EFL45129.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
disiens FB035-09AN]
Length = 179
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 66/175 (37%), Gaps = 6/175 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + F + + + + S+ V+ + + + +L+F AGL+ LL F+ + +
Sbjct: 1 MAKLIIFAILAVVILGSAVFCVSTKRIMRAATALLFVLFGVAGLYFLLDYTFLGAAQISI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE- 120
Y G + V ++F I ++ + G I F+ E
Sbjct: 61 YAGGITVMYIFAIQLVSKRTLQGLSERWLGKRTLLAGIIALIGAGTVLGVFVKNKVFAEL 120
Query: 121 -LSRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
++ IGK L + Y P E LL +IG +V++ ++
Sbjct: 121 VSINATSTEVPMQVIGKNLMSADKYGYVLPFEFISVFLLACIIGGLVILNNRNKE 175
>gi|183217792|ref|YP_001837412.1| NADH dehydrogenase subunit 6 [Guizotia abyssinica]
gi|221272325|sp|B2LMP5|NU6C_GUIAB RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|179366307|gb|ACB86578.1| NADH-plastoquinone oxidoreductase subunit 6 [Guizotia abyssinica]
Length = 176
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
NPIYS FSL FV + ++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 31 NPIYSAFSLGLVFVCISLFYILANSHFVAAAQLLIYVGAINVLIIFAVMFINGSEYSKDF 90
Query: 87 RKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVLYT 140
G + + + + + + + +N + IG L T
Sbjct: 91 HLWTVGDGVTSVVCTSLFVSLITTIPDTSWYGIIWTTKANQIIEQDLISNSQQIGIHLST 150
Query: 141 QYAYPLEISGFILLLSMIGAIVLML 165
+ P E ILL+++IGAI +
Sbjct: 151 DFFLPFEFISIILLVALIGAIAVAR 175
>gi|323148880|ref|YP_004221972.1| NADH-plastoquinone oxidoreductase subunit 6 [Erodium carvifolium]
gi|316926344|gb|ADU58197.1| NADH-plastoquinone oxidoreductase subunit 6 [Erodium carvifolium]
Length = 179
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
N IYS FSL F+ + ++L FVA L++YVGA+ + LF +M ++ +
Sbjct: 30 TNLIYSAFSLGLVFICISLFYILANCHFVAAAQLLIYVGAINILILFAVMFINGSEYSKD 89
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVLY 139
G+ + L + ++ + + +N + IG L
Sbjct: 90 FHFGTVGDGATSLVCTTLFLSLISNILNTSWYGVIWTTKAAQIIEKDLISNSQQIGIHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLMLRH 167
T + P E+ ILL+++IGAI + +
Sbjct: 150 TDFFLPFELISIILLVALIGAISVARQQ 177
>gi|221639524|ref|YP_002525786.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Rhodobacter
sphaeroides KD131]
gi|221160305|gb|ACM01285.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 precursor
[Rhodobacter sphaeroides KD131]
Length = 164
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 4/167 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L + +A+ S+ L VT ++++ L+ A ++ AG F LGA F + +++Y
Sbjct: 1 MSDLVAVWCASVALASAILAVTRPAIVHALIWLVAALLSLAGSFFALGASFAGAVQILIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++ F+F++M D E + R G A L V ++ A +
Sbjct: 61 AGAIVAVFVFVVMTADASPEALARERARLSAGWKRPAAAVALLAVPLVLGLLARASAPEA 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+G +L+ +A +E++ +LL +++GA L R
Sbjct: 121 APATGAG----LGAILFGPWALAVEVASGLLLAALMGARHLGRRREE 163
>gi|45658582|ref|YP_002668.1| NADH dehydrogenase I subunit J [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45601826|gb|AAS71305.1| NADH dehydrogenase I J subunit [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 233
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/215 (19%), Positives = 83/215 (38%), Gaps = 52/215 (24%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q L F+LF+ + I+SS V+ NPI + L+ +F + A ++ ++ A F+A + L+VY
Sbjct: 8 QLLLFFLFASVMILSSLGVIFHPNPITAAVLLVLSFFSLAAIYAVMNAIFIATMQLLVYA 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM---------- 113
GA++V +F++M+L + + + L L V +
Sbjct: 68 GAIMVLVVFVLMLLSLRDDAPRFFIFEKPIKKLLYLGLVMFLGVLLITAVQDGIPSETTV 127
Query: 114 ------------------------------------------VFSAEGELSRLVFKGNNV 131
E + +++ N
Sbjct: 128 PIGYAQNKDGKFVGYSFQISKNIKQTNTKSTLETPKTTSENQNHVHEKDTDQIILTSGNT 187
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+G ++ +Y P E+ +LL +++GA+VL +
Sbjct: 188 AAVGSAMFLRYLLPFELISVLLLAAVLGAVVLGKK 222
>gi|292385556|gb|ADE22090.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y GA+ V LF++MMLD+ K+ I + LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVFFLIAVI 108
>gi|292385564|gb|ADE22096.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y GA+ V LF++MMLD+ K+ I + LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVFFLIAVI 108
>gi|310789318|gb|EFQ24851.1| NADH dehydrogenase subunit 6 [Glomerella graminicola M1.001]
Length = 247
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/213 (25%), Positives = 92/213 (43%), Gaps = 52/213 (24%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +AI+ + L + +NPI SV LI F + +LLG F+ + L+VYVGAV +
Sbjct: 22 IVSILAILCAILTIVSKNPIVSVLFLIGLFGMVSSYLILLGLNFIGLSYLIVYVGAVSIL 81
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF----------------- 112
FLFI+M+++I + + K + FI IL LI +
Sbjct: 82 FLFILMLINIRVSELQSNTKNSIPLALFITILFNYLIFQFLPYDLAILNNSNHSSALNNV 141
Query: 113 -----------------------------------MVFSAEGELSRLVFKGNNVENIGKV 137
+ F+ + + +++ +IG +
Sbjct: 142 LYHTSFNGISDYNKIFNSFGSNSQISNVAKEGSSDLFFATSSSWDGNLIETSHISSIGNI 201
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
LYT ++ L ++ FILLL+MIGAIV+ ++ +
Sbjct: 202 LYTSHSMWLILTSFILLLAMIGAIVITIKQKNK 234
>gi|292385552|gb|ADE22087.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
gi|292385560|gb|ADE22093.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y GA+ V LF++MMLD+ K+ I + LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVFFLIAVI 108
>gi|292385568|gb|ADE22099.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 52/108 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y GA+ V LF++MMLD+ K+ I + LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVFFLIAVI 108
>gi|114107186|ref|YP_740170.1| NADH-plastoquinone oxidoreductase subunit 6 [Daucus carota]
gi|122221298|sp|Q0G9Q9|NU6C_DAUCA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|113200961|gb|ABI32477.1| NADH-plastoquinone oxidoreductase subunit 6 [Daucus carota]
Length = 176
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGVTSMVCTSIFVSLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TKSNQIVEQDLISNSQQIGIHLSTDFFLPFELISIILLVSLIGAITVAR 175
>gi|94676511|ref|YP_588817.1| NADH-quinone oxidoreductase, chain J [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
gi|94219661|gb|ABF13820.1| NADH-quinone oxidoreductase, chain J [Baumannia cicadellinicola
str. Hc (Homalodisca coagulata)]
Length = 165
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L Y F +AI S+ V+T P++++ LI + AG+F ++GA F + ++VY G
Sbjct: 2 ELALYFFGLVAIFSALRVITHNKPMHALLYLIITILAIAGVFFVIGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV+V F+F++MM++I ++ + + + L+ ++ ++
Sbjct: 62 AVVVLFIFVVMMINIHCSEQINILRQPIISIIYFILPLILLLAILLYIFWSTSNDSINNQ 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +G +L+ Y ++++ +LL ++ A L
Sbjct: 122 LID---TKTVGVLLFGPYILAVDLASMLLLAGLVVAFHLGY 159
>gi|58045440|gb|AAW65047.1| NADH dehydrogenase subunit 6 [Dictyoneurum californicum]
Length = 311
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + I V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATIGGILGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LIV +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGTLIFILFLIVVIYS 110
>gi|292385513|gb|ADE22058.1| NADH dehydrogenase subunit 6 [Lessonia tholiformis]
Length = 286
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI S+
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVFFLIAVISS 110
>gi|68164857|ref|YP_247653.1| NADH dehydrogenase subunit 6 [Cucumis sativus]
gi|67511452|emb|CAJ00812.1| NADH dehydrogenase subunit VI [Cucumis sativus]
Length = 176
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ L+ I+ S V+ N IYS FSL V+ + ++L A+FVA L++Y
Sbjct: 7 IHDFLVVLWGSGLILGSMGVLLFNNSIYSAFSLGLVLVSISLFYILANAQFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG---SFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M + + G I + +
Sbjct: 67 VGAINVLIIFAVMFMKGSEYSKDFNLWTVGNGVTFLVCTSIFVSLMTTIVDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL ++IGAI +
Sbjct: 127 TRSNQILEQDLISNSQQIGIYLSTYFFLPFELISIILLAALIGAIAVAR 175
>gi|317123854|ref|YP_004097966.1| NADH dehydrogenase subunit J [Intrasporangium calvum DSM 43043]
gi|315587942|gb|ADU47239.1| NADH dehydrogenase subunit J [Intrasporangium calvum DSM 43043]
Length = 304
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+S FF++ + +A+ ++ +V R +++ + +L+ A+F+ ++ + VY
Sbjct: 6 ESAFFWVLAPLAVAAALALVFARKAVHAAIGMAITMTILGVFYLMQKADFLGVVQVFVYT 65
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGF-LGSFFIGILAAELIVCASNFMVFSAEGELS 122
GAV++ FLF+IM++ +D + +G S + + L+ F S
Sbjct: 66 GAVMMLFLFVIMLVGVDSSDSLVETIKGHRWLSIILAVGLIGLLSSTIGSASFDEATVQS 125
Query: 123 RLV------FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + N+ + ++++ QY + E++ +L+ + + A+VL R R K
Sbjct: 126 GIDKLEASNAQTGNITGMAELIFGQYVWIFEVTSALLITAALAAMVLAHRERIAPK 181
>gi|290489862|gb|ADD31338.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Berberidopsis
corallina]
Length = 176
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL + + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLICISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTIGDGVTSLVCTSIFVSLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|115531974|ref|YP_784130.1| NADH-plastoquinone oxidoreductase subunit 6 [Pelargonium x
hortorum]
gi|122164265|sp|Q06FQ1|NU6C_PELHO RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|112382128|gb|ABI17321.1| NADH-plastoquinone oxidoreductase subunit 6 [Pelargonium x
hortorum]
Length = 176
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL F F+ + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGIILGGLGVVLLTNPIYSAFSLGFVFICISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF +M ++ + G + L + + +
Sbjct: 67 VGAINVLILFAVMFMNGSEYYKDFHLWTLGDGLTSLICTILFLSLITTILDTSWYGILWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + +G +L T + P E+ ILL++++GAI
Sbjct: 127 TKSNQIIEKDFISNSQQLGILLSTDFFLPFELMSIILLVALLGAIAAAR 175
>gi|116329147|ref|YP_798867.1| NADH dehydrogenase (ubiquinone), J chain [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330245|ref|YP_799963.1| NADH dehydrogenase (ubiquinone), J chain [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116121891|gb|ABJ79934.1| NADH dehydrogenase (ubiquinone), J chain [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116123934|gb|ABJ75205.1| NADH dehydrogenase (ubiquinone), J chain [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 224
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/206 (20%), Positives = 81/206 (39%), Gaps = 43/206 (20%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
Q L F+LF+ + I+SS V+ N I + L+ +F + A ++ ++ A F+A + L+VY
Sbjct: 8 QLLLFFLFASVMILSSLGVIFHPNAITAAVLLVLSFFSLAAIYAVMNAVFIATMQLLVYA 67
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
GA++V +F++M+L + + + + L L V + E S
Sbjct: 68 GAIMVLVVFVLMLLSLREDDTKLFLFEKPIKKLLYLGLVMFLDVLLITAVQDGIPSENSP 127
Query: 124 -------------------------------------------LVFKGNNVENIGKVLYT 140
LV N +G ++
Sbjct: 128 KIGYTKTRDGRSMDYSFTIHPRRPEYKEFEEYKSKGLSIRPPSLVEVSGNTAVVGSAMFL 187
Query: 141 QYAYPLEISGFILLLSMIGAIVLMLR 166
+Y P E+ +LL +++G +VL +
Sbjct: 188 RYLLPFELISILLLAAVLGVVVLGKK 213
>gi|91984046|ref|YP_567131.1| NADH dehydrogenase subunit 6 [Vitis vinifera]
gi|122236488|sp|Q0ZIW5|NU6C_VITVI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|91701704|gb|ABE47588.1| NADH-plastoquinone oxidoreductase subunit 6 [Vitis vinifera]
Length = 176
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL FV + ++ + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVFVCISLFYIPSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I A+ +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFNLWTVGDGVTSVVCTSIFASLITTILDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|326910750|gb|AEA11193.1| NADH dehydrogenase subunit 6 [Selaginella moellendorffii]
gi|327176857|gb|AEA29865.1| NADH dehydrogenase subunit 6 [Selaginella moellendorffii]
Length = 177
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 54/174 (31%), Positives = 83/174 (47%), Gaps = 7/174 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTV--RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMIT 58
M ++ F + S +A++S LVV NP+ +VF + FV +GL + L +F AMI
Sbjct: 1 MNNSTILFGVLSSLALVSGGLVVRSGALNPVPAVFLFLLVFVLCSGLLVWLDLDFFAMIF 60
Query: 59 LVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-----M 113
LVVY GA++VFFLF++MM E E + + L +
Sbjct: 61 LVVYAGAMVVFFLFVVMMCTFRREGREHEVAPRHTEFVVGLLFLSHLWLVLERSPRPPTP 120
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
GE V +++ +G +LYT SG ILL++++GAIVL +
Sbjct: 121 SAYPIGEHCGHVTSATHLDTLGTLLYTHVPLLFIGSGLILLVALLGAIVLTVHT 174
>gi|292385524|gb|ADE22066.1| NADH dehydrogenase subunit 6 [Lessonia adamsiae]
gi|292385528|gb|ADE22069.1| NADH dehydrogenase subunit 6 [Lessonia adamsiae]
gi|292385532|gb|ADE22072.1| NADH dehydrogenase subunit 6 [Lessonia adamsiae]
gi|292385536|gb|ADE22075.1| NADH dehydrogenase subunit 6 [Lessonia adamsiae]
Length = 311
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFIFFLIAVIYS 110
>gi|156584755|gb|ABU85209.1| NADH-plastoquinone oxidoreductase subunit 6 [Anethum graveolens]
Length = 176
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLACTSLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G I + + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGVTSIVCTSIFVSLITTIPDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQIVEQDFISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|323149135|ref|YP_004222699.1| NADH-plastoquinone oxidoreductase subunit 6 [Anthriscus cerefolium]
gi|289645628|gb|ADD13691.1| NADH-plastoquinone oxidoreductase subunit 6 [Anthriscus cerefolium]
Length = 176
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKNFHLWTVGDGVTSMVCTSIFVSLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQIVEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|126666312|ref|ZP_01737291.1| NADH dehydrogenase subunit J [Marinobacter sp. ELB17]
gi|126629113|gb|EAZ99731.1| NADH dehydrogenase subunit J [Marinobacter sp. ELB17]
Length = 176
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYL +A++++ V++ NP++ V L+ + + A +F LGA F + ++VY GA+
Sbjct: 4 AFYLSGLVAVLATLGVISNTNPVHGVLYLVVSLLAVAMVFFALGAPFAGALEIIVYAGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F+F++MML++ + ++ L A +++ ++ +G + +
Sbjct: 64 MVLFVFVVMMLNLGETAVAQERIWLQPRTWLGPSLLAGVLLLTLIDLLLRGDGGVL-VQG 122
Query: 127 KGNNVENIGKVLYTQY 142
+ + +G +L+ +
Sbjct: 123 DVLSAKQVGTILFGPW 138
>gi|89280689|ref|YP_514906.1| NADH dehydrogenase subunit 6 [Solanum lycopersicum]
gi|122201762|sp|Q2MI47|NU6C_SOLLC RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|84372037|gb|ABC56354.1| NADH-plastoquinone oxidoreductase subunit 6 [Solanum lycopersicum]
gi|89241725|emb|CAJ32448.1| NADH degydrogenase subunit 6 [Solanum lycopersicum]
Length = 176
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L A FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNAYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGITSMVCISLFISLITTISDTSWYGIIWT 126
Query: 120 ELSRLVFKGN---NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDFLSNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|325126918|ref|YP_004286155.1| NADH-plastoquinone oxidoreductase subunit 6 [Fragaria vesca subsp.
vesca]
gi|324022830|gb|ADY15404.1| NADH-plastoquinone oxidoreductase subunit 6 [Fragaria vesca subsp.
vesca]
Length = 176
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV NPIYS FSL V + ++LL + FVA ++Y
Sbjct: 7 IHDFLLIFLGSGLILGGIGVVLFTNPIYSAFSLGLVLVCISLFYILLNSYFVAAAQFLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS---FFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I +I
Sbjct: 67 VGAINVLIVFAVMFMNGSEYYQDFNLWTVGAGITLPVCTSIFVLLMITITDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNSQQIGIHLSTDFFLPFEFISIILLVALIGAIAVAR 175
>gi|58045436|gb|AAW65045.1| NADH dehydrogenase subunit 6 [Costaria costata]
Length = 311
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + I V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGILGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L F I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYFGALIFVIFLIAAIYS 110
>gi|161784246|ref|YP_001595562.1| NADH dehydrogenase ND6 subunit [Lemna minor]
gi|221272328|sp|A9L9F0|NU6C_LEMMI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|88696824|gb|ABD48549.1| NADH dehydrogenase ND6 subunit [Lemna minor]
Length = 177
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + + I+ VV NPIYS FSL + + ++LL + FVA L++Y
Sbjct: 7 IHDILVVFLGLVLILGGLGVVLFTNPIYSAFSLGLVLICVSLFYILLNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF +M + + G + + ++ ++ +
Sbjct: 67 VGAINVLILFAVMFMKGSEYSNDLNLWTVGDGVTSLVCTSILFLLISTISDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+NV+ IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKANHIIEQDLISNVQQIGIHLSTDFFLPFELISIILLVALIGAISMAR 175
>gi|94502543|ref|YP_588170.1| NADH dehydrogenase subunit 6 [Helianthus annuus]
gi|281190757|ref|YP_003330996.1| NADH dehydrogenase subunit 6 [Parthenium argentatum]
gi|122179550|sp|Q1KXQ6|NU6C_HELAN RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|88656947|gb|ABD47198.1| NADH-plastoquinone oxidoreductase subunit 6 [Helianthus annuus]
gi|269924870|gb|ACZ52743.1| NADH dehydrogenase subunit 6 [Parthenium argentatum]
Length = 176
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
NPIYS FSL FV + ++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 31 NPIYSAFSLGLVFVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFINGSEYSKDF 90
Query: 87 RKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVLYT 140
G + + + + + + + +N + IG L T
Sbjct: 91 HLWTVGDGVTSVVCTSLFVSLITTIPDTSWYGIIWTTKANQIIEQDLISNSQQIGIHLST 150
Query: 141 QYAYPLEISGFILLLSMIGAIVLML 165
+ P E ILL+++IGAI +
Sbjct: 151 DFFIPFEFISIILLVALIGAIAVAR 175
>gi|116617161|ref|YP_817535.1| NADH-plastoquinone oxidoreductase subunit 6 [Coffea arabica]
gi|122153672|sp|A0A388|NU6C_COFAR RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|116242217|gb|ABJ89732.1| NADH-plastoquinone oxidoreductase subunit 6 [Coffea arabica]
Length = 176
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL F V + ++LL + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGFVLVCISLFYILLNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G G+ + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTIGDGVTSVVCTGLFISLITTIPDMSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKSNQILEQDLITNSQQIGVHLSTDFFLPFELVSIILLVALIGAIAVAR 175
>gi|77164628|ref|YP_343153.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Nitrosococcus oceani ATCC 19707]
gi|254433511|ref|ZP_05047019.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Nitrosococcus oceani AFC27]
gi|76882942|gb|ABA57623.1| NADH dehydrogenase subunit J [Nitrosococcus oceani ATCC 19707]
gi|207089844|gb|EDZ67115.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Nitrosococcus oceani AFC27]
Length = 167
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 87/166 (52%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ FY+ + +A++S+ +V+T N I+++ LI + + A +F LLGA F A + +++Y G
Sbjct: 2 EITFYIAAIIAVVSTAMVITRLNAIHALLYLIVSLLAVALIFFLLGAPFAAALEVIIYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ E + + + + +++ +++ + LS
Sbjct: 62 AIMVLFVFVMMMLNLGEEAVAQENRWLTPSMWIGPGILSFVLLIELVYLLVAESSALSST 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
K + +G L+ Y +E++ +LL ++GA L +
Sbjct: 122 --KMIPPQQVGITLFGPYLLAVELAAMLLLAGLVGAYHLGREEPEE 165
>gi|46205959|ref|ZP_00210109.1| COG0839: NADH:ubiquinone oxidoreductase subunit 6 (chain J)
[Magnetospirillum magnetotacticum MS-1]
Length = 221
Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 44/76 (57%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ F +F+A+ + + T + S L+ +F+ AGLF+LL A+ + ++ +++Y
Sbjct: 5 FELTAFATCAFVAVAGALGMTTTMSMFRSGIFLMASFIGVAGLFILLSADLIGLLQVMMY 64
Query: 63 VGAVIVFFLFIIMMLD 78
+G +V LF+++++
Sbjct: 65 IGGFLVMILFMVLVMH 80
>gi|197131418|gb|ACH47227.1| NADH-plastoquinone oxidoreductase subunit 6 [Sarcocaulon
vanderietiae]
Length = 176
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPI+S FSL F F+ + ++L FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNPIFSAFSLGFVFICISLFYILANCHFVAASQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF +M ++ + G+ + L + ++ +
Sbjct: 67 VGAINVLILFAVMFMNGSEYSKDLNLGTVGDGTTSLVCTTLFLSIISNILDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRANQIIEKDLISNSQQIGIRLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|313199752|ref|YP_004021366.1| NADH-plastoquinone oxidoreductase subunit 6 [Theobroma cacao]
gi|309321316|gb|ADO64859.1| NADH-plastoquinone oxidoreductase subunit 6 [Theobroma cacao]
gi|328924831|gb|ADO64942.2| NADH-plastoquinone oxidoreductase subunit 6 [Theobroma cacao]
Length = 176
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + ++L + FVA L++YVGA+ V LF +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINVLILFAVMFMNGSEYYKD 89
Query: 86 PRKKRGFLGS---FFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVLY 139
G IL + + S + + + + + IG L
Sbjct: 90 FNLWTIGNGVTSLVCTSILVSLITTILDTSWYGIIWTTRSNQIIEQDLISNSQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E ILL+++IGAI +
Sbjct: 150 TDFFLPFEFISIILLVALIGAIAVAR 175
>gi|261879872|ref|ZP_06006299.1| NADH dehydrogenase I [Prevotella bergensis DSM 17361]
gi|270333465|gb|EFA44251.1| NADH dehydrogenase I [Prevotella bergensis DSM 17361]
Length = 175
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 70/175 (40%), Gaps = 6/175 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + + + ++ V + + L+ AG++ +LG F+ + +
Sbjct: 1 MANLIVFCILAVVILGAAIASVLTARIMRAATFLLLVLFGIAGIYFVLGYTFLGAAQISI 60
Query: 62 YVGAVIVFFLFII--MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
Y G + + ++F I M + E K + + I ++ ++ F A
Sbjct: 61 YAGGITIMYIFAINLMSKHSLQGLVEQFKGKRVVQGALISLVGLATVLVVYLKSEFLAHA 120
Query: 120 ELSRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + V+ IG+ L QY P E+ LL +IG I++ + +
Sbjct: 121 QFNSVADLELPVQKIGEALVGSEKYQYVLPFELISVFLLACIIGGIMIARKEDKK 175
>gi|222824429|ref|YP_002576003.1| NADH-quinone oxidoreductase, J subunit [Campylobacter lari RM2100]
gi|222539650|gb|ACM64751.1| NADH-quinone oxidoreductase, J subunit [Campylobacter lari RM2100]
Length = 168
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 4/165 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ F L S + + + V + +Y++ SL A V +G + LL AEF+ I ++V
Sbjct: 1 MFETIAFCLLSVLVLGFFLISVLSTSVLYAISSLAAAMVFLSGFYFLLNAEFIGAIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GA++ + F +M D I+V E K FI + I+ S M ++
Sbjct: 61 YSGAILGLYSFAMMFFDASIKVKENLK----GKRVFIFAVIFSAILLISIIMGYNFGLNE 116
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ V+ ++ + IG L+T+Y E +LL+++I AI L +
Sbjct: 117 TGEVYGLDSTQQIGFTLFTKYMLAFEFMAILLLIALICAIALTQK 161
>gi|108804465|ref|YP_644402.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Rubrobacter
xylanophilus DSM 9941]
gi|108765708|gb|ABG04590.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Rubrobacter
xylanophilus DSM 9941]
Length = 177
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ F + M ++S+ VV R+ ++S + AF+ AG F++L +A +++YVG
Sbjct: 2 TVAFAFLTGMTLVSALGVVLSRSVVHSALFMSGAFLGVAGFFVMLNVPVLAAFQVLIYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV V LF IM R + + G AA + +++ + +
Sbjct: 62 AVTVVILFGIMFTQRPQV---RRFRTIINRQIWPGFFAAAGVGAFLCYILATEGWGETGP 118
Query: 125 VFKGNNVENIGKVLYT 140
+V +G+ L
Sbjct: 119 GNGARSVAVLGRSLLG 134
>gi|292385548|gb|ADE22084.1| NADH dehydrogenase subunit 6 [Lessonia brevifolia]
Length = 311
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVFFLIAVIYS 110
>gi|304312248|ref|YP_003811846.1| NADH dehydrogenase I, subunit J [gamma proteobacterium HdN1]
gi|301797981|emb|CBL46203.1| NADH dehydrogenase I, subunit J [gamma proteobacterium HdN1]
Length = 175
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 3/163 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ FYL S + + S +VV N ++S+ LI + + A +F +GA F A + ++VY
Sbjct: 1 MEMFTFYLTSIIILTSILMVVISANAVHSLLYLILSSLAMAVIFFQMGAPFAAALEVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F++MML++ E + LG + L A L++ F++F
Sbjct: 61 AGAIMVLFVFVVMMLNLGQAAVEEERTLMPLGIWRGPALLAALLLAELAFLLFQQPVASL 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +G L+ Y +E++ +L+ ++GA L
Sbjct: 121 PVAVY---AKQVGITLFGPYLLAVELASILLMAGLVGAYHLGR 160
>gi|292385445|gb|ADE22007.1| NADH dehydrogenase subunit 6 [Lessonia nigrescens]
gi|292385449|gb|ADE22010.1| NADH dehydrogenase subunit 6 [Lessonia nigrescens]
Length = 311
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + I +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFFYLGILLFFFFSIAVIYS 110
>gi|290489868|gb|ADD31341.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Euonymus
americanus]
Length = 176
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL + A ++L + FVA L++YVGA+ V +F +M ++
Sbjct: 30 TNPIYSAFSLGLVLICIALFYILSNSYFVAAAQLLIYVGAINVLIIFAVMFMNGSEYHNA 89
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVLY 139
G + + L++ + + + N + IG L
Sbjct: 90 FYLWNAGGGVTSLVCTSIFLLLITTIPDTSWYGIIWTTRSNQIIEKDLITNSQQIGIRLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+++IGAI
Sbjct: 150 TDFFLPFELISIILLVALIGAIAAAR 175
>gi|292385540|gb|ADE22078.1| NADH dehydrogenase subunit 6 [Lessonia brevifolia]
Length = 311
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVFFLIAVIYS 110
>gi|332881560|ref|ZP_08449209.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332680558|gb|EGJ53506.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 171
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + M + S L VT + + +L+F AGL+ +LG ++ + L V
Sbjct: 5 TLGQVVFGIVALMMAVCSVLAVTSGRILRAATALLFVLFGTAGLYFMLGYTYLGAVQLSV 64
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ D + E + + + + L V + F+
Sbjct: 65 YAGGIVVLYVFSILLTRSDKNMNERIPRGRWFAAILTVLAGFGLTVFLLSSYGFARFSVP 124
Query: 122 SRLVFKGNNVEN--IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ V N IG Y Q+ P E+ +LL MIGAI++ +
Sbjct: 125 PLVELDPVKVGNALIGMEKY-QFVLPFEVVSVLLLACMIGAIMIARKR 171
>gi|313184044|ref|YP_004021201.1| NADH-plastoquinone oxidoreductase subunit 6 [Castanea mollissima]
gi|290489882|gb|ADD31348.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Quercus nigra]
gi|309321571|gb|ADO65111.1| NADH-plastoquinone oxidoreductase subunit 6 [Castanea mollissima]
Length = 176
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + N IYS FSL V + ++L + VA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGIGVVLLTNTIYSAFSLGLVLVCISLFYILSNSHLVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + ++ A+ +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDLNLWTVGDGVTLLICTILFCLLMATISDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E+ ILL ++IGAI +
Sbjct: 127 TRSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLAALIGAIAVAR 175
>gi|94265857|ref|ZP_01289587.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [delta
proteobacterium MLMS-1]
gi|94269627|ref|ZP_01291516.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [delta
proteobacterium MLMS-1]
gi|93451145|gb|EAT02072.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [delta
proteobacterium MLMS-1]
gi|93453593|gb|EAT03989.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [delta
proteobacterium MLMS-1]
Length = 173
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F+ F + I + + N I +V L V AG++ LG+ F+A++ +++Y GA
Sbjct: 13 VVFFGFILLIIFGALVATNAVNLIRAVCGLALCLVGVAGIYYFLGSPFLALMQILIYAGA 72
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V V +F +M+ A R R + L L+ + F
Sbjct: 73 VCVAIVFAVML---AEPAAVQRFHRSHPLAGPGAALTGALMAWGLAALAFKTSWPSPPQR 129
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+E +G+ + T + E+ ILLL+++G++VL R R
Sbjct: 130 LNDGALEEVGRAMMTTFVVSFELISLILLLAIVGSLVLARRGR 172
>gi|292385441|gb|ADE22004.1| NADH dehydrogenase subunit 6 [Lessonia nigrescens]
Length = 311
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + I +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFFFFSIAVIYS 110
>gi|58045486|gb|AAW65070.1| NADH dehydrogenase subunit 6 [Lessonia nigrescens]
Length = 311
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + I +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFFFFSIAVIYS 110
>gi|309322124|ref|YP_003933940.1| NADH-plastoquinone oxidoreductase subunit 6 [Erodium texanum]
gi|197131408|gb|ACH47222.1| NADH-plastoquinone oxidoreductase subunit 6 [Erodium texanum]
gi|300069217|gb|ADJ66339.1| NADH-plastoquinone oxidoreductase subunit 6 [Erodium texanum]
Length = 176
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
N IYS F+L F+ + ++L + FVA L++YVGA+ + LF +M L+ +
Sbjct: 30 TNLIYSAFALGLVFICISLFYILANSHFVAAAQLLIYVGAINILILFAVMFLNGSESSKD 89
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVLY 139
R G+ + L + ++ + + +N + IG L
Sbjct: 90 SRFGTVGDGATSLVCTTLFLSLISNILDTSWYRIIWTTRATQIIEKDLISNSQQIGIRLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+++IGAI +
Sbjct: 150 TDFFLPFELISIILLVALIGAIGVAR 175
>gi|325210978|ref|YP_004286056.1| NADH-plastoquinone oxidoreductase subunit 6 [Gossypium thurberi]
gi|290775840|gb|ADD62336.1| NADH-plastoquinone oxidoreductase subunit 6 [Gossypium thurberi]
Length = 176
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V LF +M ++ + G IL + +
Sbjct: 67 VGAINVLILFAVMFMNGSEYYKDFNLWTIGNGLTSLVCTSILVSLITTILDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNSQQIGIHLATDFFLPFEFISIILLVALIGAIDVTR 175
>gi|292385461|gb|ADE22019.1| NADH dehydrogenase subunit 6 [Lessonia trabeculata]
gi|292385465|gb|ADE22022.1| NADH dehydrogenase subunit 6 [Lessonia trabeculata]
Length = 311
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + I +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFFFFSIAVIYS 110
>gi|49574628|ref|NP_848113.2| NADH dehydrogenase subunit 6 [Adiantum capillus-veneris]
gi|68565793|sp|Q85FH2|NU6C_ADICA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|48476042|gb|AAP29444.2| NADH dehydrogenase subunit 6 [Adiantum capillus-veneris]
Length = 197
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ L ++ S V + N + S FSL F + L+ +L A+FVA L+V
Sbjct: 6 LIHDFVLALVELGILLGSLGAVLLVNTVNSAFSLGLVFTCISLLYFVLNADFVAAAQLLV 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA+ V +F +M+ D + G++ + + ++ + +S +
Sbjct: 66 YVGAINVLTVFAVMITDEPAGSETTARGIGYIITAGTCTILFSILSFVIHNTKWSDLSLI 125
Query: 122 SRLVFK-----GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ G+NV+ +G L ++ P E+ +LL +++GAI L
Sbjct: 126 PQSGISTSGTLGSNVQQLGYKLLGEFVIPFELLSILLLAALVGAINLARNE 176
>gi|313679553|ref|YP_004057292.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Oceanithermus
profundus DSM 14977]
gi|313152268|gb|ADR36119.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Oceanithermus
profundus DSM 14977]
Length = 156
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 11/165 (6%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M FY + ++ + L VT + + + SL F AGL+LLLG+ +A I +V
Sbjct: 1 MSLTAFYALAAFVLVFAILAVTTASMVRAALSLAITFFLIAGLYLLLGSPALAAIQFMVN 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
A+ + LFIIMM + + A L+ A+ + F
Sbjct: 61 ASAIPIMTLFIIMMTQSRASAGPRSWQ-----------IVAGLLAAAAALVFFKGNVGHG 109
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ E +G L P E++ +LLL+M+GAIVL R
Sbjct: 110 DGQITPVSPEALGVNLLQAALLPFEVASVLLLLAMVGAIVLARRR 154
>gi|58045444|gb|AAW65049.1| NADH dehydrogenase subunit 6 [Alaria fistulosa]
Length = 311
Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + I V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGILGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I A L+V +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGSLIFALFLVVVIYS 110
>gi|292385607|gb|ADE22128.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILFFVFFLIAVIYS 110
>gi|114329800|ref|YP_740618.1| NADH-plastoquinone oxidoreductase subunit 6 [Platanus occidentalis]
gi|122165990|sp|Q09FZ3|NU6C_PLAOC RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|114054438|gb|ABI49832.1| NADH-plastoquinone oxidoreductase subunit 6 [Platanus occidentalis]
Length = 176
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++ + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYIPSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYNDFHLWTVGDGVTSLLCTSIFVSLITTIPDTSWYGVIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNGQQIGIHLSTDFFLPFELISIILLVALIGAIAMAR 175
>gi|84508581|ref|YP_448629.1| NADH dehydrogenase subunit 6 [Fucus vesiculosus]
gi|39653304|gb|AAR29323.1| NADH dehydrogenase subunit 6 [Fucus vesiculosus]
Length = 263
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 58/252 (23%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + V++ +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFIFLTILGASLGVKVISTQNPVYSGLYLVLLFFLGSAISFLLGVEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEP--RKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
Y GA+ V LF++MMLD+ +KR F + L++ S+ ++
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIENPWSVNQKRFFYIGISFFVFFLILLISNSSLLMAFRVR 120
Query: 120 ELS--------RLVFKGNNVENI------------------------------------- 134
S +VF ++ +NI
Sbjct: 121 STSIISLLASFNVVFHNDDTKNILVGLLDENLTELFRLWFFHDQIINSFDKNTMWFVDFD 180
Query: 135 --------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDN 186
+LY+ +A L I+G +LL++M+GAI L L+ + + KQL N
Sbjct: 181 SPCGLNDPSYLLYSTHAILLIIAGVVLLIAMVGAISLTLQKN---CPESLYKQLGRESKN 237
Query: 187 SIVMVKVKSGKG 198
++ +K K G
Sbjct: 238 AVFTIKEKPNSG 249
>gi|58045438|gb|AAW65046.1| NADH dehydrogenase subunit 6 [Agarum clathratum]
Length = 311
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGALIFFFFLIAAIYS 110
>gi|90579197|ref|ZP_01235007.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Vibrio
angustum S14]
gi|90440030|gb|EAS65211.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Vibrio
angustum S14]
Length = 177
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ ++ FY S + ++++ ++ V+ P++ L + + A +F LLGA F+A + ++
Sbjct: 1 MLTWNIIFYASSAIMLLAAISLLFVKEPMHGAVYLTTSLLALAVIFYLLGAPFIAALQII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGA++V F+F IM+ + + + ++ +++ + ++
Sbjct: 61 LYVGAIMVLFVFFIMLSPASRTFPLTANR-----TVILPVILLTIMLVEAFIVLNHGHQF 115
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ K + + +G L+ Y +E +LL +++ I L + +
Sbjct: 116 YTIETIKTISPKAVGADLFNHYKLAIEALSTLLLGALVAVIYLAAQMKAR 165
>gi|11466464|ref|NP_038167.1| NADH dehydrogenase subunit 6 [Chrysodidymus synuroideus]
gi|7110461|gb|AAF36933.1|AF222718_7 NADH dehydrogenase subunit 6 [Chrysodidymus synuroideus]
Length = 184
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 85/175 (48%), Gaps = 1/175 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
F+ + I +S V NP++S+ L+ F++A+G+ GA+F+ ++ +++YVGA+ +
Sbjct: 3 IFFNLILIFASLFVFLSENPVHSILFLVLVFLSASGICFYFGADFLGLLFVIIYVGAIAI 62
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F+FIIMML+I I + F + + F F
Sbjct: 63 LFIFIIMMLNIKI-KNKALNYFYFFVFIGFLAFLQLYLGLSKCFSNFFFFNSNFFFFDSL 121
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
+ IG+ LY + + ISG ILL++MIGAIVL L + ++ + +Q
Sbjct: 122 SIEFFIGQTLYNYFTFCFLISGIILLIAMIGAIVLTLNYTSKHFKKFLFRQQVRT 176
>gi|58045488|gb|AAW65071.1| NADH dehydrogenase subunit 6 [Lessonia corrugata]
gi|292385505|gb|ADE22052.1| NADH dehydrogenase subunit 6 [Lessonia corrugata]
gi|292385509|gb|ADE22055.1| NADH dehydrogenase subunit 6 [Lessonia corrugata]
Length = 311
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLIFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y GA+ V LF++MMLD+ K+ I + LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVFFLIAVI 108
>gi|290489872|gb|ADD31343.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Gunnera
manicata]
Length = 176
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV NPIYS FSL V + L++ + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLFTNPIYSAFSLGLVLVCISLLYIPSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHFWTVGDGVTSLVCTSIFVSLITTISDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +N++ IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNIQQIGIHLLTDFFLPFELISIILLVALIGAISVAR 175
>gi|91208953|ref|YP_538987.1| NADH dehydrogenase subunit 6 [Gossypium hirsutum]
gi|122201415|sp|Q2L958|NU6C_GOSHI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|85687467|gb|ABC73679.1| NADH-plastoquinone oxidoreductase subunit 6 [Gossypium hirsutum]
Length = 176
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V LF +M ++ + G IL + +
Sbjct: 67 VGAINVLILFAVMFMNGSEYYKDFNLWTIGNGLTSLVCTSILVSLITTILDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNSQQIGIHLATDFFLPFEFISIILLVALIGAIAVAR 175
>gi|292385469|gb|ADE22025.1| NADH dehydrogenase subunit 6 [Lessonia trabeculata]
Length = 311
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + I +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFFFFSIAVIYS 110
>gi|242910154|ref|YP_002970698.1| NADH-plastoquinone oxidoreductase subunit 6 [Alsophila spinulosa]
gi|218454823|gb|ACK77160.1| NADH-plastoquinone oxidoreductase subunit 6 [Alsophila spinulosa]
Length = 195
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 3/169 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ L ++ S VV++ N ++S F L F + +L+L A+ +A L+V
Sbjct: 6 SIHGAILTLIELGILLGSLGVVSLANVVHSAFLLGLVFTRISLSYLVLNADSLAAAQLLV 65
Query: 62 YVGAVIVFFLFIIMMLD---IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
YVGA+ V + + + D G+ + I+ S E
Sbjct: 66 YVGAINVLIVSAVTVTDEPTSPNSTTNWSIGYFITLGACTGLFSLSTIMIYSTRWSIVNE 125
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
++ NNV+ +G L T + P E+ +LL++++GAI L
Sbjct: 126 SKILVEKTSENNVQGLGYKLLTTFLVPFELLSILLLVALVGAITLARNE 174
>gi|114329710|ref|YP_740530.1| NADH-plastoquinone oxidoreductase subunit 6 [Citrus sinensis]
gi|122166138|sp|Q09MC3|NU6C_CITSI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|113952676|gb|ABI49074.1| NADH-plastoquinone oxidoreductase subunit 6 [Citrus sinensis]
Length = 178
Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 8/171 (4%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFILVFLGSGLILGGLGVVLFTNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG-----SFFIGILAAELIVCASNFMVFSA 117
VGAV V +F +M ++ + + +G I + +
Sbjct: 67 VGAVNVLIIFAVMFMNGSDYSKDFQLNLWTIGDGLTSLVCTSIFFSLITTILDTSWYGII 126
Query: 118 EGELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 WTTRANQIIEQDLISNSQQIGIHLSTDFFLPFELVSIILLVALIGAIAVAR 177
>gi|289474452|gb|ADC97839.1| NADH dehydrogenase subunit 6 [Muricea purpurea]
Length = 155
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + I+ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK----------RQDISKQLESN 183
L++MIGAI+L + RQD+ Q+
Sbjct: 114 LVAMIGAILLAKQPNSPSLYNSHGKSLRSRQDLFLQISRE 153
>gi|108773226|ref|YP_635801.1| NADH dehydrogenase subunit 6 [Chara vulgaris]
gi|122177789|sp|Q1ACE6|NU6C_CHAVU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|77157882|gb|ABA61923.1| subunit 6 of NADH-plastoquinone oxidoreductase [Chara vulgaris]
Length = 178
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 73/170 (42%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q + YL I + V+ N +Y+ SL A L+L A+F+A+ ++
Sbjct: 6 MSYQLIVAYLIQLGIYIGALAVIFFNNIVYAAISLALVLSLIALLYLFFDADFLAVTQIL 65
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGA+ V LF IM++ + ++ +++ +
Sbjct: 66 IYVGAINVLILFAIMLISLPKSSTFIFYFTKKSQISAFACISLFVLLVKIILQTPWSTQS 125
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
L+ + N ++ IG L + + P E+ +LL+++IGA+ + +
Sbjct: 126 SYILLNENNKLDQIGIYLLSNFLLPFELISLLLLIALIGAVSIARYQNTE 175
>gi|325298887|ref|YP_004258804.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
salanitronis DSM 18170]
gi|324318440|gb|ADY36331.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacteroides
salanitronis DSM 18170]
Length = 175
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
Q++ FY+ + + S L VT + + L+F A +F +LG F+ + L+V
Sbjct: 8 SFQNIVFYVVAAAIALCSVLAVTSGKLLRAATYLLFVLFGTAAIFFMLGYTFLGAVQLMV 67
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG--SFFIGILAAELIVCASNFMVFSAEG 119
Y G +IV ++F I + D ++ K + + A L++ +N +A
Sbjct: 68 YAGGIIVLYVFSIALTRSDKDMRYKISKARLFSVLATTVVGAALVLLLLFTNGFALNAIP 127
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
L + + IG Y Q+ P E+ +LL MIG I++ + +
Sbjct: 128 LGEELPSREVGMALIGTEKY-QFVLPFEVVSVLLLACMIGGILIARKEK 175
>gi|114707867|ref|ZP_01440760.1| hypothetical protein FP2506_00140 [Fulvimarina pelagi HTCC2506]
gi|114536645|gb|EAU39776.1| hypothetical protein FP2506_00140 [Fulvimarina pelagi HTCC2506]
Length = 199
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 4/169 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + L F S +AI+S + V + + + F L+ +FV + ++L A ++ + T+
Sbjct: 1 MGLTDLLFLALSAVAILSGWRVFATDSMVRASFLLLLSFVAVGLIIVMLAAPYIGVATVF 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+ ++V LF++M + + S G+LA + A F F
Sbjct: 61 MMAVEMMVMALFMVMFMMNPAGLNPMMMVHQHRFSIVAGVLAFAGLTAAILFTSF----P 116
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ V ++G L E +G LL +MIG+++L R R
Sbjct: 117 KIPVDPSTPVVHDLGIELLGPSMLIFETAGVTLLATMIGSVILSSRSGR 165
>gi|28261772|ref|NP_783285.1| NADH dehydrogenase subunit 6 [Atropa belladonna]
gi|75248022|sp|Q8S8U6|NU6C_ATRBE RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|20068386|emb|CAC88099.1| NADH degydrogenase ND6 subunit [Atropa belladonna]
Length = 176
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGITSMVCISLFISLITTISDTSWYGIIWT 126
Query: 120 ELSRLVFKGN---NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + N + IG L T + P E+ ILL ++IGAI +
Sbjct: 127 TRSNQIIEQDFLSNSQQIGIHLSTDFFLPFELISIILLDALIGAIAVAR 175
>gi|282860267|ref|ZP_06269337.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
bivia JCVIHMP010]
gi|282586941|gb|EFB92176.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
bivia JCVIHMP010]
Length = 177
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 72/174 (41%), Gaps = 5/174 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ Q + F + S + + ++ L V + + +L+F AGL+ LL F+ + + +
Sbjct: 1 MAQIIMFAVLSVVILGAALLSVMTNRIMRAATALLFVLFGVAGLYFLLDYTFLGAVQISI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS-AEGE 120
Y G + + ++F I +++ + G + L+V + F+
Sbjct: 61 YAGGITMVYVFAIHLVNKQTLQGLSERWLGKRTILAAALALIGLVVVVAIFLKNQLLNAV 120
Query: 121 LSRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
++ +E IG L + Y P E LL +IG +V++ + ++
Sbjct: 121 VASTTSAELPMEKIGTTLMSGDKYGYVLPFEFISLFLLACIIGGLVILNKTKKG 174
>gi|149390319|ref|YP_001294150.1| NADH-plastoquinone oxidoreductase subunit 6 [Chloranthus spicatus]
gi|221272316|sp|A6MMH4|NU6C_CHLSC RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|146744239|gb|ABQ43311.1| NADH-plastoquinone oxidoreductase subunit 6 [Chloranthus spicatus]
Length = 176
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV + NPI S FSL V + ++ + FVA L++Y
Sbjct: 7 IHDILLVFLGSGLILGGLGVVLLTNPISSAFSLGLVLVCISLFYIPSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + GF IL + +
Sbjct: 67 VGAINVLIVFAVMFMNGSEYYNDFHLWTIGDGFTSLVCTSILFSLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +NV+ IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLTSNVQQIGIHLSTDFYLPFELISIILLVALIGAIAMAR 175
>gi|295697739|ref|YP_003590977.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacillus
tusciae DSM 2912]
gi|295413341|gb|ADG07833.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacillus
tusciae DSM 2912]
Length = 179
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 1/141 (0%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
R +Y S+ F+ AG+++LLGA+F+A +++Y GA+ + LF IM+ D E
Sbjct: 38 RKVMYMALSIGLVFLGMAGMYVLLGADFLAFAQILIYAGAITILMLFAIMLTRHDEVEEE 97
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYP 145
R + + ++ A + A N+V + ++L+T Y P
Sbjct: 98 ERAGLRQWLAGLGAVALGAAMLWAIRTTTWPAAPAQPPWPA-QNSVTALAEMLFTNYVVP 156
Query: 146 LEISGFILLLSMIGAIVLMLR 166
E+ +L ++++GA++L +
Sbjct: 157 FELVSVLLTVALVGAVILARK 177
>gi|292385437|gb|ADE22001.1| NADH dehydrogenase subunit 6 [Lessonia nigrescens]
Length = 311
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFWGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + I +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFFFFSIAVIYS 110
>gi|108773182|ref|YP_635692.1| NADH dehydrogenase subunit 6 [Solanum tuberosum]
gi|122196327|sp|Q27RZ6|NU6C_SOLTU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|88656857|gb|ABD47110.1| NADH-plastoquinone oxidoreductase subunit 6 [Solanum tuberosum]
Length = 176
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL + + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLICTSLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGITSMVCISLFISLITTISDTSWYGIIWT 126
Query: 120 ELSRLVFKGN---NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDFLSNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|332826696|gb|EGJ99518.1| hypothetical protein HMPREF9455_04114 [Dysgonomonas gadei ATCC
BAA-286]
Length = 167
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 3/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + FY+ + + + S+ + VT + I S L+F + AGL+LLL F+ + + V
Sbjct: 1 MAEQIIFYIIATIIVFSTIMAVTTQKIIRSATFLLFVLLGTAGLYLLLDYHFLMAVQIAV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI--VCASNFMVFSAEG 119
Y G V+V F+F I++ K + + + + N F
Sbjct: 61 YAGGVMVLFIFAILLTHEPGVDVRFEKPGRMFVAAVTALAGLGICGHIIFYNVNKFYTYV 120
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S L + + +G Y QY P E +LL +IG I++ +
Sbjct: 121 TQSELQMQDIGMAMMGTDKY-QYLLPFEAISVLLLACIIGGIMIARKR 167
>gi|57505807|ref|ZP_00371732.1| NADH-ubiquinone oxidoreductase, NQO10 subunit (NQO10)
[Campylobacter upsaliensis RM3195]
gi|57015837|gb|EAL52626.1| NADH-ubiquinone oxidoreductase, NQO10 subunit (NQO10)
[Campylobacter upsaliensis RM3195]
Length = 172
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 73/171 (42%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ L F +FS + + + V +N +YS+ +L V + + +L AEF+ I ++V
Sbjct: 1 MIEQLSFIVFSVLILSFFLVAVLSKNMLYSLSALAGGMVFLSSFYFMLDAEFLGAIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D + E K + + L S +
Sbjct: 61 YSGAVLGIYSFAMMFFDASKDFKERLKFKKSFFALIGLSLVGLFASLMSFKLNSVNVDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AIVL + K
Sbjct: 121 FIDTALFDLNKQLAFAIFSKYLLAFEFVAILLLIALVCAIVLTHKELIKEK 171
>gi|290489856|gb|ADD31335.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Nelumbo
nucifera]
Length = 176
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++ + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFYIPSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYNDFHLWTIGDGVTSLVCTSIFFSLITTILDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNGQQIGIHLSTDFFLPFELISIILLVALIGAIAMAR 175
>gi|11466018|ref|NP_054560.1| NADH dehydrogenase subunit 6 [Nicotiana tabacum]
gi|78102601|ref|YP_358740.1| NADH dehydrogenase subunit 6 [Nicotiana sylvestris]
gi|81301631|ref|YP_398926.1| NADH dehydrogenase subunit 6 [Nicotiana tomentosiformis]
gi|14194987|sp|Q32722|NU6C_TOBAC RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|122212870|sp|Q33BW9|NU6C_NICTO RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|122213586|sp|Q3C1Q1|NU6C_NICSY RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|2924281|emb|CAA77434.1| NADH dehydrogenase ND6 subunit [Nicotiana tabacum]
gi|77799628|dbj|BAE46717.1| NADH dehydrogenase ND6 subunit [Nicotiana sylvestris]
gi|80750990|dbj|BAE48066.1| NADH dehydrogenase ND6 subunit [Nicotiana tomentosiformis]
Length = 176
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGITSMVCISLFISLITTISDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDFISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|292385429|gb|ADE21995.1| NADH dehydrogenase subunit 6 [Lessonia nigrescens]
gi|292385433|gb|ADE21998.1| NADH dehydrogenase subunit 6 [Lessonia nigrescens]
Length = 311
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFLLIATLGGTLGVKVTSTQNPVYSGLYLVLLFFWGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + I +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFFFFSIAVIYS 110
>gi|284009328|emb|CBA76494.1| NADH-quinone oxidoreductase chain J [Arsenophonus nasoniae]
Length = 177
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 85/164 (51%), Gaps = 2/164 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T NP++++ LI + + A +F +G+ F + ++VY G
Sbjct: 2 EFTFYVAGLVAILATLRVITHTNPVHALLYLIVSLLVLAIVFFAVGSYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V + + ++ + + +++ + + + + S++
Sbjct: 62 AIMVLFVFVVMMLNLGKSVVDQERVWLQPKAWIGPAILSAVLLGVIVYAIVAIK--HSQI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ + + +G L+ Y +E+ +LL ++ A + R
Sbjct: 120 KGEMISAKQVGISLFGPYVLAVELVSLLLLAGLVVAFHIGREKR 163
>gi|194132141|gb|ACF33395.1| NADH-plastoquinone oxidoreductase subunit 6 [Gonystylus bancanus]
Length = 176
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + ++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKD 89
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVLY 139
G + + + + + F + + + +N + IG L
Sbjct: 90 LNLWIVGDGVTSLVCTSILVSLITTIFDMSWYGIIWTTRSNQIIEQDLISNSQQIGIHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+ +IGAI +
Sbjct: 150 TDFFLPFELISIILLVGLIGAIAVAR 175
>gi|164420816|ref|YP_001648636.1| NADH dehydrogenase subunit 6 [Hydra oligactis]
gi|158668156|gb|ABW76614.1| NADH dehydrogenase subunit 6 [Hydra oligactis]
Length = 185
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 86/178 (48%), Gaps = 1/178 (0%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FF+ S + I S + + NPI+SVF L+ F + L + L EF++ + +++Y+GA+
Sbjct: 4 FFFFSSILIIFGSLMCINSLNPIHSVFWLVAIFFFSXTLLINLNLEFLSFLLIIIYIGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL-SRLV 125
++ FLF+IMMLDI I L IV S F+ + + S +
Sbjct: 64 VILFLFVIMMLDIIQIKKNSNINNIIPIILIILSLFIIKIVNISEFIPYYINSDYLSFNL 123
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
+N N+ Y++Y + +L + MIG I L L + + K+Q+I Q N
Sbjct: 124 INHHNXHNLTLYFYSKYFINFLLISIVLSIGMIGVIKLTLVNNTNSKKQEIFVQHLRN 181
>gi|260592329|ref|ZP_05857787.1| NADH dehydrogenase I, subunit 6 [Prevotella veroralis F0319]
gi|260535716|gb|EEX18333.1| NADH dehydrogenase I, subunit 6 [Prevotella veroralis F0319]
Length = 179
Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 77/176 (43%), Gaps = 7/176 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + F + + + + S+ V+ + + + +L+F AGL+ LL F+ + +
Sbjct: 1 MARLIMFAILAVVILASAIFCVSTKRIMRAATALLFVLFGVAGLYFLLDYTFLGAAQISI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRG---FLGSFFIGILAAELIVCASNFMVFSAE 118
Y G + + ++F I ++ + G FL + + A ++V + ++
Sbjct: 61 YAGGITMMYIFAIQLVSKRTLQGLSERWLGKRTFLAAAIALVGFATVVVVLLKNALINST 120
Query: 119 GELSRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
++ K ++ IG+ L + Y P E LL +IG +V++ +++
Sbjct: 121 IVNGDMLSKEVTMDTIGQNLMSADKYGYVLPFEFISVFLLACIIGGLVILNNKKKE 176
>gi|58045484|gb|AAW65069.1| NADH dehydrogenase subunit 6 [Saccharina sessilis]
Length = 311
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAEL 105
Y GA+ V LF++MMLD+ + K+ L I A L
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGALIFAFCL 104
>gi|82702150|ref|YP_411716.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Nitrosospira
multiformis ATCC 25196]
gi|82410215|gb|ABB74324.1| NADH dehydrogenase subunit J [Nitrosospira multiformis ATCC 25196]
Length = 188
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FYL +A+ ++ +VVT + ++++ LI + + A +F +LGA F A + +++Y GAV+
Sbjct: 5 FYLSGAVAVAATLMVVTRASAVHALLYLIVSLLAVAIIFFVLGAPFAAALEVIIYAGAVM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE------- 120
V F+F+IMML++ A ++ G + + + L++ +++ +
Sbjct: 65 VLFVFVIMMLNLGKAAAVKEREWLSPGMWVGPSILSALLLAELIYILVQNIQDVQGVYDG 124
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLE 147
+ + + IG L+ Y +E
Sbjct: 125 TAISTRAVVDSKEIGIALFGPYLLGVE 151
>gi|110225687|ref|YP_665692.1| NADH dehydrogenase subunit 6 [Mesostigma viride]
gi|17222558|gb|AAL36731.1|AF353999_11 NADH dehydrogenase subunit 6 [Mesostigma viride]
Length = 219
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/103 (40%), Positives = 63/103 (61%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYLFS +A++S+ +V+ +NP+YSV LI F N L +L G +F+AM+ +VVYVGA+
Sbjct: 2 LFYLFSSLALVSAIIVIRTKNPVYSVLFLILVFANVTALLILEGLDFLAMVFIVVYVGAI 61
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
V FLF++MML+I++ R I IL+ I+
Sbjct: 62 AVLFLFVVMMLNINLAEMSENMVRYLPVGGLILILSLFQILLI 104
>gi|312129478|ref|YP_003996818.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Leadbetterella byssophila DSM 17132]
gi|311906024|gb|ADQ16465.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Leadbetterella byssophila DSM 17132]
Length = 159
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 80/166 (48%), Gaps = 7/166 (4%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L F+LF + I V+ +N +Y+ + L+ F+ AG+F+ GAEF+A +++Y
Sbjct: 1 MIDLVFWLFCLLTIGGGVYVLLSKNVLYAAYGLLSTFLGVAGMFVFAGAEFMAAAQIMIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VG +++ +F IM+ + + + + A +++ ++ S
Sbjct: 61 VGGIMILLIFGIMLSTRRKYLVVEDAAQNRGILVAVLLAAVWIVLIIKLRLL-------S 113
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ +++ +G L T + LE+ G ILL++++GA + R
Sbjct: 114 GEPVELISIKKVGLALMTSHVLILELVGVILLMALVGATYIARDDR 159
>gi|57923584|gb|AAW59538.1| NADH dehydrogenase subunit 6 [Pelagophycus porra]
gi|58045460|gb|AAW65057.1| NADH dehydrogenase subunit 6 [Pelagophycus porra]
Length = 311
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 53/110 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFIIIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I L +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGSLIFCFVLFAAIYS 110
>gi|58045478|gb|AAW65066.1| NADH dehydrogenase subunit 6 [Saccharina gyrata]
Length = 311
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I A L +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGALIFAFFLSAVIYS 110
>gi|57923528|gb|AAW59496.1| NADH dehydrogenase subunit 6 [Alaria esculenta]
Length = 311
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGALIFVFFLIAAIYS 110
>gi|326200332|gb|ADZ52371.1| NADH dehydrogenase subunit 6 [Asclepias syriaca]
Length = 176
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M I+ VV + N IYS FSL V + ++LL + FVA L++Y
Sbjct: 7 MHDFLLVFLGSGLILGGLGVVLLPNSIYSAFSLGLVLVCISLFYILLSSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V LF +M + + R G + + + + + +
Sbjct: 67 VGAVNVLILFAVMFMSDSEYYKDSRLWTVGDGVTLVVCTSLFISLITTIPDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQVLEQDLISNSQQIGIHLSTDFFLPFELISLILLVALIGAIAVAR 175
>gi|78778013|ref|YP_394328.1| NADH dehydrogenase subunit J [Sulfurimonas denitrificans DSM 1251]
gi|78498553|gb|ABB45093.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Sulfurimonas
denitrificans DSM 1251]
Length = 190
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +++ FYLF+F+ I ++ VT +Y++ +L + + F +LGA+F+ + +VV
Sbjct: 1 MFEAIAFYLFAFLTIAMFYIAVTTSQALYALSALAAGMIFISAFFFILGADFLGAVQIVV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D EV E + + + +I+ A+ + + E
Sbjct: 61 YSGAVMALYAFGMMFFDTTREVKEKQGNKAIVIGLSSLAALMVVIIVAAPIVGSNIEALY 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ NV+ +G VL+T+Y P E++ +LL++MI IVL +
Sbjct: 121 -PMSEGVGNVQEVGMVLFTKYLVPFEVAAVMLLVAMIAGIVLAGKK 165
>gi|57923532|gb|AAW59499.1| NADH dehydrogenase subunit 6 [Alaria marginata]
gi|57923536|gb|AAW59502.1| NADH dehydrogenase subunit 6 [Alaria nana]
gi|57923540|gb|AAW59505.1| NADH dehydrogenase subunit 6 [Alaria taeniata]
gi|57923572|gb|AAW59529.1| NADH dehydrogenase subunit 6 [Macrocystis integrifolia]
gi|58045442|gb|AAW65048.1| NADH dehydrogenase subunit 6 [Alaria marginata]
Length = 311
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGALIFVFFLIAAIYS 110
>gi|57923588|gb|AAW59541.1| NADH dehydrogenase subunit 6 [Postelsia palmaeformis]
gi|58045454|gb|AAW65054.1| NADH dehydrogenase subunit 6 [Postelsia palmaeformis]
Length = 311
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 57/110 (51%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIAILGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L F I I L+V +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYFGILIFFLFLLVAIYS 110
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+GAI L L+ + + +QL N+ VK K
Sbjct: 243 LYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAFFSVKEKP 297
>gi|149390594|ref|YP_001294238.1| NADH-plastoquinone oxidoreductase subunit 6 [Buxus microphylla]
gi|221272312|sp|A6MM90|NU6C_BUXMI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|146762339|gb|ABQ45303.1| NADH-plastoquinone oxidoreductase subunit 6 [Buxus microphylla]
Length = 176
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPI+S FSL + + + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGIILGGLGVVLLTNPIFSAFSLGLVLFCISLFHIPSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M + + G I + +
Sbjct: 67 VGAINVLIIFAVMFTNGSEYYNDFHVWTVGDGVTSLVCTSIFVSLITTILDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNGQQIGIHLSTDFFLPFELVSIILLVALIGAIAMAR 175
>gi|91209042|ref|YP_538903.1| NADH dehydrogenase subunit 6 [Solanum bulbocastanum]
gi|122201800|sp|Q2MID4|NU6C_SOLBU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|84371949|gb|ABC56267.1| NADH-plastoquinone oxidoreductase subunit 6 [Solanum bulbocastanum]
Length = 176
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCTSLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGNGITSMVCISLFISLITTISDTSWYGIIWT 126
Query: 120 ELSRLVFKGN---NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDFLSNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|268164064|ref|YP_003288829.1| NADH dehydrogenase subunit 6 [Saccharina angustata]
gi|58045482|gb|AAW65068.1| NADH dehydrogenase subunit 6 [Saccharina angustata]
gi|226235356|dbj|BAH47625.1| NADH dehydrogenase subunit 6 [Saccharina angustata]
gi|262318374|dbj|BAI48694.1| NADH dehydrogenase subunit 6 [Saccharina angustata]
Length = 311
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIAILGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I A L +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGALIFAFFLSAAIYS 110
>gi|149390496|ref|YP_001294324.1| NADH-plastoquinone oxidoreductase subunit 6 [Illicium oligandrum]
gi|221272326|sp|A6MMZ8|NU6C_ILLOL RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|147917449|gb|ABQ52573.1| NADH-plastoquinone oxidoreductase subunit 6 [Illicium oligandrum]
Length = 177
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ +F I+ VV + NP+YS FSL V + + + FVA L++Y
Sbjct: 7 IHDIFLVFLGSGLILGGLGVVLLTNPVYSAFSLGLVLVCISLFHIPSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ G IL + +
Sbjct: 67 VGAINVLIVFAVMFMNGSEYYNYFHLWTVGDGVTSLICTSILFSLIKTILDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
S + + +NV+ IG L T + P E+ ILL++++GAI + +
Sbjct: 127 TRSNQIIEQDLISNVQQIGIHLSTDFYLPFELISIILLVALVGAIAMARQE 177
>gi|289606445|emb|CBI61288.1| putative NADH dehydrogenase subunit 6 [Sordaria macrospora]
Length = 238
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 45/204 (22%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +AI V+ +NPI SV LI F + + +LLG F+ + L+VY+GA+ +
Sbjct: 17 IISILAIFCGISVIVNKNPIISVLFLIGLFASVSSYLILLGLSFIGLAYLIVYIGAISIL 76
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGI----------------------------- 100
FLFI+M+++I I + + +GI
Sbjct: 77 FLFILMLINIRISELQSNTNNSIPLTIILGISLSYSLFQLLPYDIAILSNFSSNINNNLY 136
Query: 101 ----------------LAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAY 144
L +N ++F + + N++ IG V+Y+ Y+
Sbjct: 137 NLSMNKQNNGNLELIPLPQFHCSLKNNDLLFVTSKIWDGNLAESNHITTIGNVMYSNYSI 196
Query: 145 PLEISGFILLLSMIGAIVLMLRHR 168
L ++ FILLL+M+G+IV++++
Sbjct: 197 WLFLASFILLLAMVGSIVIIMKSN 220
>gi|169794125|ref|YP_001718489.1| NADH dehydrogenase subunit 6 [Manihot esculenta]
gi|221272332|sp|B1NWK2|NU6C_MANES RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|157695937|gb|ABV66206.1| NADH-plastoquinone oxidoreductase subunit 6 [Manihot esculenta]
Length = 176
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + ++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKD 89
Query: 86 PRKKR---GFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVLY 139
G I + + + + + + + + + IG L
Sbjct: 90 FNLWTVGSGVTSLVCTSIFVSLITIIPDTSWYGIIWTTKTNQIIEQDLISNGQQIGIHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E ILL+++IGAI +
Sbjct: 150 TDFFLPFEFISIILLVALIGAIAVAR 175
>gi|89073309|ref|ZP_01159839.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Photobacterium sp. SKA34]
gi|89051019|gb|EAR56483.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Photobacterium sp. SKA34]
Length = 177
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ ++ FY S + ++++ ++ V+ P++ L + + A +F LLGA F+A + ++
Sbjct: 1 MLTWNIIFYASSAIMLLAAISLLFVKEPMHGAVYLTTSLLALAVIFYLLGAPFIAALQII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGA++V F+F IM+ + L + ++ E + ++ F
Sbjct: 61 LYVGAIMVLFVFFIMLSPASRTFPLTANRTVILPVILLTVMLVEAFIVLNHGHQF----- 115
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ K + + +G L+ Y +E +LL +++ I L + +
Sbjct: 116 YAIETIKTISPKAVGADLFNHYKLAIEALSTLLLGALVAVIYLAAQMKVR 165
>gi|284034102|ref|YP_003384033.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Kribbella
flavida DSM 17836]
gi|283813395|gb|ADB35234.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Kribbella
flavida DSM 17836]
Length = 176
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F + +A++++ LVVT R +++ L+ A AG F L AEFVA++ ++VY
Sbjct: 1 MTTALFSVAGAVALVAAVLVVTSRRIVHAALWLVVALGAVAGCFGALHAEFVALVQILVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA++V LF +M+ R + + A L+ + +
Sbjct: 61 VGAIVVLVLFALMLTKAPTNPLPALTTRRSPFAAVVAGALAVLLGAGVVIAFGNEKIG-- 118
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ E +G ++ + P E+ +LL ++IGAIVL R
Sbjct: 119 --PVPAGSAEAVGTSVFRIWVLPFEVLSVLLLAALIGAIVLSHRK 161
>gi|200004082|ref|YP_002221532.1| NADH dehydrogenase subunit 6 [Hydra magnipapillata]
gi|194578744|tpe|CAP49321.1| TPA: NADH dehydrogenase subunit 6 [Hydra vulgaris]
Length = 185
Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 1/173 (0%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
S + I+ + + NPI+SVF L+ F + L + L EF++++ +++YVGA+++ FL
Sbjct: 9 SILIILGCLMCINSLNPIHSVFWLVTVFFFSFALLINLNLEFLSLLLIIIYVGAIVILFL 68
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL-SRLVFKGNN 130
F+IMMLDI I L I+ F+ + + + + N
Sbjct: 69 FVIMMLDIIQIKKNSNINNIIPIILIILSLLTIKIINKDIFLSYHLNNDFLNFNLINHYN 128
Query: 131 VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
N+ Y++Y+ + IL + MIG IVL + + + K+Q I Q N
Sbjct: 129 FHNLALFFYSKYSINFILISIILSIGMIGVIVLTITYNSNSKKQKIFIQHLRN 181
>gi|32480898|ref|NP_862808.1| NADH dehydrogenase subunit 6 [Calycanthus floridus var. glaucus]
gi|75233676|sp|Q7YJT1|NU6C_CALFG RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|32399434|emb|CAD28775.1| NADH dehydrogenase ND6 subunit [Calycanthus floridus var. glaucus]
Length = 176
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + + + FVA L++YVGAV V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFHIPSNSYFVAAAQLLIYVGAVNVLIVFAVMFMNGSEYSND 89
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG------NNVENIGKVLY 139
G + + + + + + + +NV+ IG L
Sbjct: 90 FHLWTVGDGVTSLVCTSILFSLITTIWNTSWYGIIWTTRSNQIIEQDLTSNVQQIGIRLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL ++IGAI +
Sbjct: 150 TDFYLPFELISIILLAALIGAIAMAR 175
>gi|326909443|ref|YP_004327714.1| NADH dehydrogenase subunit 6 [Hevea brasiliensis]
gi|308523557|gb|ADO33607.1| NADH dehydrogenase subunit 6 [Hevea brasiliensis]
Length = 176
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + ++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKD 89
Query: 86 PRKKR---GFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVLY 139
G I + + + + + + + + + IG L
Sbjct: 90 FNLWTVGSGVTSLVCTSIFVSLITILPDTSWYGIIWTTRTNQIIEQDLISNGQQIGIHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E ILL+++IGAI +
Sbjct: 150 TDFFLPFEFISIILLVALIGAIAVAR 175
>gi|268164103|ref|YP_003288880.1| NADH dehydrogenase subunit 6 [Saccharina coriacea]
gi|226235426|dbj|BAH47628.1| NADH dehydrogenase subunit 6 [Saccharina coriacea]
gi|262318413|dbj|BAI48732.1| NADH dehydrogenase subunit 6 [Saccharina coriacea]
Length = 311
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I A L +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGAFIFAFFLSAAIYS 110
>gi|292559559|ref|YP_003540986.1| NADH-plastoquinone oxidoreductase chain 6 [Phoenix dactylifera]
gi|290790967|gb|ADD63222.1| NADH-plastoquinone oxidoreductase chain 6 [Phoenix dactylifera]
gi|294620632|gb|ADF28201.1| NADH-plastoquinone oxidoreductase chain 6 [Phoenix dactylifera]
Length = 176
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 6/147 (4%)
Query: 25 VRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVA 84
+ NPI+S FSL V + ++L + FVA L++YVGA+ V +F +M ++
Sbjct: 29 LTNPIFSAFSLGLVLVCISLFYILSNSYFVAAAQLLIYVGAINVLIIFAVMFMNGSEYSN 88
Query: 85 EPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVL 138
+ G IL + + + S + + +N++ IG L
Sbjct: 89 DSYFWTIGDGVTSLVCTSILFSLITIIPDTSWYGIFWTTRSSQIIEQDLISNIQQIGIHL 148
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 149 STDFYLPFELISIILLVSLIGAITMAR 175
>gi|292385477|gb|ADE22031.1| NADH dehydrogenase subunit 6 [Lessonia vadosa]
Length = 311
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 52/108 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVEPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y GA+ V LF++MMLD+ + I + LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVTKKRFLYLGILLFLFFLIAVI 108
>gi|290967673|ref|YP_003495101.1| NADH dehydrogenase subunit 6 [Trametes cingulata]
gi|289832517|gb|ADD21053.1| NADH dehydrogenase subunit 6 [Trametes cingulata]
Length = 203
Score = 71.2 bits (173), Expect = 8e-11, Method: Composition-based stats.
Identities = 56/203 (27%), Positives = 88/203 (43%), Gaps = 34/203 (16%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M++ L +F A+ SS LV+T +NP+ +V LI FVNAAG +LLG F+ + ++VY
Sbjct: 1 MKNFLIELLAFAALFSSVLVITSKNPVIAVIFLISVFVNAAGYLILLGIGFIGISYIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V FLF+IMM++I + + + + I + FS +
Sbjct: 61 VGAIAVLFLFVIMMINIKLTDILETGSQYTKNLPLALSIGSLFIYEIYTIIPFSFNNVSN 120
Query: 123 RLV----------------------------------FKGNNVENIGKVLYTQYAYPLEI 148
++ +E IG+ LYT A L I
Sbjct: 121 TILDLLFKFNGFILNYEISINDWVNNAVNPVIADTALTPFLQIEAIGQGLYTYGASWLII 180
Query: 149 SGFILLLSMIGAIVLMLRHRRDI 171
+ ILLL+M+ I + R +
Sbjct: 181 TSVILLLAMVAPIFISKTRRNNS 203
>gi|290489870|gb|ADD31342.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Ficus sp.
Moore 315]
Length = 176
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V+ + L++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 30 NNPIYSAFSLGLVLVSISLLYILSNSYFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYKD 89
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVLY 139
G + + ++ + + + + + +N + IG L
Sbjct: 90 FNLWTVGNGFTLLICTSIFGLLITTITDISWYGIIWTTRLNQIIEHDLISNSQQIGIHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E ILL ++IGAI +
Sbjct: 150 TDFFLPFEFISIILLAALIGAITVAR 175
>gi|291296247|ref|YP_003507645.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Meiothermus
ruber DSM 1279]
gi|290471206|gb|ADD28625.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Meiothermus
ruber DSM 1279]
Length = 199
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 85/168 (50%), Gaps = 7/168 (4%)
Query: 5 SLFFY-LFSFMAIIS-SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
S+ F+ + + + ++ VV ++N +++ +LI F+ AG+++ L A FVAMI ++VY
Sbjct: 2 SIGFWEVLALLVLVGTGLAVVRLQNAVHAALALIANFLVVAGVYVALEARFVAMIQIIVY 61
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V FLF+IM+L ++ L A + + V +
Sbjct: 62 AGAIVVLFLFVIMLLSAASANVGQDL---LPRLGWVAALGALGLAGVLTYAVTRFQPPAG 118
Query: 123 RLVFKGNNVENIGKVLYT--QYAYPLEISGFILLLSMIGAIVLMLRHR 168
G + +G +LY ++ Y L + GF+LL++ + A+VL+ R
Sbjct: 119 TPALGGGLPQALGPLLYDPEKWLYALLVVGFLLLVATVAAVVLIEPER 166
>gi|57923556|gb|AAW59517.1| NADH dehydrogenase subunit 6 [Pleurophycus gardneri]
gi|58045450|gb|AAW65052.1| NADH dehydrogenase subunit 6 [Pleurophycus gardneri]
Length = 311
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 53/105 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI 106
Y GA+ V LF++MMLD+ + K+ L I LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGALIFVLFLI 105
>gi|325857141|ref|ZP_08172431.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
denticola CRIS 18C-A]
gi|327313383|ref|YP_004328820.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
denticola F0289]
gi|325483204|gb|EGC86182.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
denticola CRIS 18C-A]
gi|326944974|gb|AEA20859.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
denticola F0289]
Length = 179
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 74/176 (42%), Gaps = 7/176 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + F + + + + S+ V+ + + + +L+F AGL+ LL F+ + + +
Sbjct: 1 MARLIMFAVLAVVILASAVFCVSTKRIMRAATALLFVLFGVAGLYFLLDYTFLGAVQISI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRG---FLGSFFIGILAAELIVCASNFMVFSAE 118
Y G + + ++F I ++ + G FL + + V + +
Sbjct: 61 YAGGITMMYIFAIQLVSKRTLQGLSERWLGKRTFLAAAIALAGLGTVTVVLLKNELIRST 120
Query: 119 GELSRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ K +++ +G+ L + Y P E LL +IG +V++ +++
Sbjct: 121 VVNGDALSKEISMDVVGQTLMSADKYGYVLPFEFISVFLLACIIGGLVILNNKKKE 176
>gi|290489878|gb|ADD31346.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Oxalis
latifolia]
Length = 176
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
N IYS FSL V + ++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 30 NNTIYSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNSSEYSKD 89
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVLY 139
G + ++ +++ + + + + +N + IG L
Sbjct: 90 FNLWTVGNGITLLVCISIFVLLITTIPDISWYGIIWTTRSNQIIEQNWIDNSQQIGIHLL 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+++IGAI +
Sbjct: 150 TDFFLPFELISIILLVALIGAIAVAR 175
>gi|125213990|dbj|BAF46418.1| NADH dehydrogenase subunit 6 [Rhodotorula glutinis]
Length = 222
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 47/210 (22%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M ++ L + AI+S +V+T +NP+ SV LI F+N AG +LLG ++ ++ L+VY
Sbjct: 1 MNNVLLDLLALGAILSGIMVITAKNPVISVLFLIAVFLNVAGYLVLLGVAYLGLVYLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS------------ 110
VGA+ + FLF+IMML++ + + L +
Sbjct: 61 VGAIAILFLFVIMMLNLRLVELVETGQEYTKSLPMGAFLGSLFFFELLSILPVSYHDGGS 120
Query: 111 -----------------------------------NFMVFSAEGELSRLVFKGNNVENIG 135
+ +E+IG
Sbjct: 121 LHVSLSIFNWLNTTLLGISNTDTALDSIHHSVGTEGVHAAFNPVVADSTMTTFTQIESIG 180
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
LYT + L ++ I LL+M+G IVL +
Sbjct: 181 HGLYTYASLWLVVASVIFLLAMVGPIVLCM 210
>gi|149390406|ref|YP_001294405.1| NADH dehydrogenase subunit 6 [Dioscorea elephantipes]
gi|221272321|sp|A6MMR0|NU6C_DIOEL RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|148668098|gb|ABR01482.1| NADH-plastoquinone oxidoreductase subunit 6 [Dioscorea
elephantipes]
Length = 176
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + + I+ VV + N IYS FSL + + ++ + FVA L++Y
Sbjct: 7 IHDILVIFLGSVLILGGLGVVLLNNLIYSAFSLGWVLFCISLFYISSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M + + G I + +
Sbjct: 67 VGAINVLIIFAVMFISGSEYSNDSHLWTVGDGVTSVVCTSIFFSLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +NV+ IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TRSNQIIEQDLISNVQQIGIHLSTNFYLPFELISIILLISLIGAITMAR 175
>gi|84508621|ref|YP_448668.1| NADH dehydrogenase subunit 6 [Desmarestia viridis]
gi|45925653|gb|AAS79054.1| NADH dehydrogenase subunit 6 [Desmarestia viridis]
Length = 311
Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFIFIAILGGSLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ L L+V N
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLLYISALFFGWILLVVGYN 110
>gi|197131412|gb|ACH47224.1| NADH-plastoquinone oxidoreductase subunit 6 [Geranium macrorrhizum]
Length = 176
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + N IYS FSL F+ + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNLIYSAFSLGLVFICISFFYILANSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ + LF +M ++ + + G + L + ++ +
Sbjct: 67 VGAINILILFAVMFINGSEYSKDFNLRTVGDGVTSLVCTTLFLSLISNILDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRATQIVEKDLISNSQQIGIRLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|119368552|ref|YP_913239.1| NADH dehydrogenase ND6 subunit [Gossypium barbadense]
gi|221272324|sp|A0ZZ88|NU6C_GOSBA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|119224914|dbj|BAF41300.1| NADH dehydrogenase ND6 subunit [Gossypium barbadense]
Length = 176
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 6/145 (4%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEV--- 83
NPIYS FSL V + ++L FVA L++YVGA+ V LF++M ++
Sbjct: 31 NPIYSAFSLGLVLVCISLFYILTNYHFVATAKLLIYVGAINVLILFVVMFMNSSEYYKDF 90
Query: 84 AEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLYT 140
G IL + + S + + N + IG L T
Sbjct: 91 NPWTIGNGLTSLVCTSILVSLISTILDTSWYGIIWTTRSNQIIEQDLIGNSQQIGIHLAT 150
Query: 141 QYAYPLEISGFILLLSMIGAIVLML 165
+ P E ILL+++IGAI + L
Sbjct: 151 DFFLPFEFISIILLVALIGAIDVTL 175
>gi|114330023|ref|YP_740704.1| NADH-plastoquinone oxidoreductase subunit 6 [Nandina domestica]
gi|122165914|sp|Q09FQ7|NU6C_NANDO RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|114054525|gb|ABI49918.1| NADH-plastoquinone oxidoreductase subunit 6 [Nandina domestica]
Length = 176
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + + + FVA L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFHIPANSHFVAAAQLLIYVGAINVLIVFAVMFMNGSEYYND 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVLY 139
G I + + + S + + + + + +G L
Sbjct: 90 FHLWTVGDGVTSLVCTSIFVSLITTISDTSWYGIIWTTRSNQIIEQDLINKGQQLGIHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+++IGAI +
Sbjct: 150 TDFFLPFELISIILLVALIGAIAMAR 175
>gi|198276156|ref|ZP_03208687.1| hypothetical protein BACPLE_02345 [Bacteroides plebeius DSM 17135]
gi|198270968|gb|EDY95238.1| hypothetical protein BACPLE_02345 [Bacteroides plebeius DSM 17135]
Length = 171
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 75/169 (44%), Gaps = 3/169 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+Q + FY+ I S L VT + + L+F + ++ +LG F++ + L+V
Sbjct: 4 SLQEIVFYIVGACIIACSILAVTTGKILRAATYLLFVLLGTGAIYGILGYTFLSAVQLMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL--AAELIVCASNFMVFSAEG 119
Y G ++V ++F I++ D + + + ++ A L + +N +
Sbjct: 64 YAGGIVVLYVFSILLTQSDKNMKYKINRAKLISVLLTIVIGAALVLFLVMTNGFALNLIP 123
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ L + IG Y Q+ P E+ +LL MIGAI++ + +
Sbjct: 124 QGVELPVENIGHALIGTGKY-QFVLPFEVVSVLLLACMIGAILIARKQK 171
>gi|330997241|ref|ZP_08321094.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Paraprevotella xylaniphila YIT 11841]
gi|329571036|gb|EGG52743.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Paraprevotella xylaniphila YIT 11841]
Length = 171
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 74/168 (44%), Gaps = 3/168 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + S M + S L VT + + +L+F AGL+ +LG ++ + L V
Sbjct: 5 TLGQVVFGVVSLMMAVCSVLAVTSGRILRAATALLFVLFGTAGLYFMLGYTYLGAVQLSV 64
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G ++V ++F I++ D + E + + + + L V + F+
Sbjct: 65 YAGGIVVLYVFSILLTRSDKNMNERIPRGRWFAAMLTVLAGFGLTVFLLSSYGFARFSVP 124
Query: 122 SRLVFKGNNVEN--IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ V N +G Y Q+ P E+ +LL MIGAI++ +
Sbjct: 125 PLVELDPVKVGNALVGMGKY-QFVLPFEVVSVLLLACMIGAIMIARKR 171
>gi|189459780|ref|ZP_03008565.1| hypothetical protein BACCOP_00409 [Bacteroides coprocola DSM 17136]
gi|189433509|gb|EDV02494.1| hypothetical protein BACCOP_00409 [Bacteroides coprocola DSM 17136]
Length = 171
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 3/169 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+Q + FY+ + + S L VT + + L+F ++ +LG F+ + L+V
Sbjct: 4 TLQEIVFYVVAAAIAVFSVLAVTTGKILRAATYLLFVLFGTGAIYGVLGYTFLGAVQLMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL--AAELIVCASNFMVFSAEG 119
Y G ++V ++F I++ D + P + + ++ A L + +N +
Sbjct: 64 YAGGIVVLYVFSILLTQSDKNMKYPINRGKLISVLLTTLIGAALVLFLIFTNGFALNIIP 123
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ L + + IG Y Q+ P E+ +LL MIGAI++ + +
Sbjct: 124 QGVELPAREIGLALIGTEKY-QFVLPFEVVSILLLACMIGAILIARKQK 171
>gi|325269273|ref|ZP_08135891.1| NADH dehydrogenase subunit J [Prevotella multiformis DSM 16608]
gi|324988400|gb|EGC20365.1| NADH dehydrogenase subunit J [Prevotella multiformis DSM 16608]
Length = 179
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 73/176 (41%), Gaps = 7/176 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + F + + + + S+ V+ + + + +L+F AGL+ LL F+ + + +
Sbjct: 1 MARLIMFAVLAVVILASAVFCVSTKRIMRAATALLFVLFGVAGLYFLLDYTFLGAVQISI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL---GSFFIGILAAELIVCASNFMVFSAE 118
Y G + + ++F I ++ + G +F A ++V +
Sbjct: 61 YAGGITMMYIFAIQLVSKRTLQGLSERWLGKRTILAAFIALAGFATVVVVLLKNELIRNT 120
Query: 119 GELSRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + ++ +G+ L + Y P E LL +IG +V++ +++
Sbjct: 121 VVEGDSLSRELTMDTVGQTLMSADKYGYVLPFEFISVFLLACIIGGLVILNHKKKE 176
>gi|58045480|gb|AAW65067.1| NADH dehydrogenase subunit 6 [Saccharina latissima]
gi|226235350|dbj|BAH47623.1| NADH dehydrogenase subunit 6 [Laminaria sachalinensis]
Length = 311
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF 96
Y GA+ V LF++MMLD+ + K+ L
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYL 95
>gi|57923548|gb|AAW59511.1| NADH dehydrogenase subunit 6 [Alaria sp. LL02FI]
Length = 311
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGALIFVFFLIAAIYS 110
>gi|197131410|gb|ACH47223.1| NADH-plastoquinone oxidoreductase subunit 6 [Geranium carolinianum]
Length = 176
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + N IYS FSL F+ + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNLIYSAFSLGLVFICISLFYILANSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ + +F +M ++ + G+ + L + ++ +
Sbjct: 67 VGAINILIIFAVMFINGSEYSKDLNLGTVGDGATSLVCTTLFLSLISNILDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRATQIVEKDLISNSQQIGIRLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|58045462|gb|AAW65058.1| NADH dehydrogenase subunit 6 [Egregia menziesii]
Length = 311
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSLISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L + I L +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGVLIFVFFLSAIIYS 110
>gi|289474437|gb|ADC97829.1| NADH dehydrogenase subunit 6 [Alaskagorgia sp. USNM 1115602]
Length = 155
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 17/160 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + I+ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVL 113
Query: 154 LLSMIGAIVLMLRHRRD----------IKRQDISKQLESN 183
L++MIGAI+L + RQD+ Q+
Sbjct: 114 LVAMIGAILLAKQPNSPFLYNSHGESLRSRQDLFLQISRE 153
>gi|157736567|ref|YP_001489250.1| NADH-quinone oxidoreductase, J subunit [Arcobacter butzleri RM4018]
gi|315635730|ref|ZP_07890993.1| NADH-quinone oxidoreductase subunit J [Arcobacter butzleri JV22]
gi|157698421|gb|ABV66581.1| NADH-quinone oxidoreductase, J subunit [Arcobacter butzleri RM4018]
gi|315480027|gb|EFU70697.1| NADH-quinone oxidoreductase subunit J [Arcobacter butzleri JV22]
Length = 173
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L F +F AI + ++ +NP++S ++ ++ AG+F LL A F+ ++ ++VY
Sbjct: 1 MVDLIFIALAFFAITGAIAMIVYKNPMFSALGVLITMLSVAGMFALLNATFLFLVQIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++ LFI+M L+I E + L + ++ L V + + + +
Sbjct: 61 AGAIMTLILFILMFLNIKEEDLPHEPNKYKLIAL-GAVIMIPLNVLVLKAVSNLPQKDFN 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ +++ +G LY + E+ +LL++++G++VL
Sbjct: 120 IVQGDFGDIKPVGIELYNHWIVAFELISILLLIALVGSVVLA 161
>gi|297565705|ref|YP_003684677.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Meiothermus
silvanus DSM 9946]
gi|296850154|gb|ADH63169.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Meiothermus
silvanus DSM 9946]
Length = 185
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 3/130 (2%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
VVT RN +++ +LI F+ AG+++ L A F+ M+ ++VY GA++V FLF+IM+L
Sbjct: 19 VVTARNAVHAALALIANFLVLAGVYVALDARFLGMVQVIVYAGAIVVLFLFVIMLLSAAQ 78
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ 141
+G LA +++ ++ V + G + IG VLY
Sbjct: 79 AEVGINPLSRLTPVAALGALALAVVLMLASRNVPVPPQVGN---LNGGLPQAIGPVLYGP 135
Query: 142 YAYPLEISGF 151
+ Y L GF
Sbjct: 136 WLYALLAVGF 145
>gi|320352996|ref|YP_004194335.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfobulbus
propionicus DSM 2032]
gi|320121498|gb|ADW17044.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfobulbus
propionicus DSM 2032]
Length = 184
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 2/163 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F L + +I + + V R + +V L F AG++ L + F+AM+ +++YVGA
Sbjct: 23 IIFLLTVALVVIGALIAVNARRLVRAVAGLAVCFTGLAGVYYFLLSPFLAMMQMLIYVGA 82
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V + F IMM + + K R L +AA + + + + R
Sbjct: 83 VSILIAFGIMMATPEEQQTPGMKHRSALAGPLAFSVAALIFAALTLLGLKTQWQVFPR-- 140
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+++ +G L T + E+ +LLL++IGA+VL R R
Sbjct: 141 QGSFDIKAVGMSLLTTHGMVFELISIVLLLAIIGALVLAQRGR 183
>gi|302824511|ref|XP_002993898.1| hypothetical protein SELMODRAFT_137798 [Selaginella moellendorffii]
gi|296399275|gb|ADH10450.1| NADH-plastoquinone oxidoreductase subunit 6 [Selaginella
moellendorffii]
gi|300138265|gb|EFJ05039.1| hypothetical protein SELMODRAFT_137798 [Selaginella moellendorffii]
Length = 190
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 4/156 (2%)
Query: 17 ISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMM 76
+ S VV++ N ++ S + + A+F A + ++++ GAV V F M
Sbjct: 21 LGSLGVVSLVNIVHPAPSSGSVSACISLPHPSMNADFAAAVQILIHAGAVNVPIPFAAMP 80
Query: 77 LDIDIEVAEPRKKRGFLGS----FFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
+ + G ++ +++ + ++V+
Sbjct: 81 VSQPQYPHPAKPWTVGDGITSALRTSAFPPLINMILYTSWYRIFPIVLRNAGSSPTHSVQ 140
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
IG T+ P E +LL++++GAI + R +
Sbjct: 141 RIGSYSSTESLPPFEPPSIVLLVALVGAITVARREQ 176
>gi|295136962|ref|YP_003587796.1| NADH dehydrogenase subunit 6 [Lathyrus sativus]
gi|293338684|gb|ADE43656.1| NADH dehydrogenase subunit 6 [Lathyrus sativus]
Length = 176
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 25 VRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVA 84
+ NPI+S FSL V + L++L + FVA L++YVGA+ + +F +M ++
Sbjct: 29 LTNPIFSAFSLGLVLVCISLLYILANSHFVAASQLLIYVGAINILIIFAVMFMNSSEYYQ 88
Query: 85 EPRKKRGFLGSFFI---GILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVL 138
+ G I I + + + + + + + + + IG L
Sbjct: 89 DLNLWTVGDGITLIVCTSIFVSLITIISDTSWYGIIWTTRPNQIIEQDLISTSQQIGIHL 148
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAIV+
Sbjct: 149 STDFFLPFELISIILLVSLIGAIVVAR 175
>gi|309322278|ref|YP_003934356.1| NADH-plastoquinone oxidoreductase subunit 6 [Monsonia speciosa]
gi|197131416|gb|ACH47226.1| NADH-plastoquinone oxidoreductase subunit 6 [Monsonia speciosa]
gi|300069371|gb|ADJ66491.1| NADH-plastoquinone oxidoreductase subunit 6 [Monsonia speciosa]
Length = 178
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 8/171 (4%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ V+ + NPI+S FSL F+ + F+L FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVLLLTNPIFSAFSLGLVFICISFFFILANCHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF +M ++ LG+ ++ L + + ++ ++ +
Sbjct: 67 VGAINVLILFAVMFMNSSEYAKSKDLHLRTLGAGATSLVCTTLFLSIISNILDTSWYGII 126
Query: 123 RLVFKGNNVE--------NIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+E IG L T + P E+ ILL+++IGAI
Sbjct: 127 WTTRANQILEKDLISNSQQIGIRLSTDFYLPFELISIILLVALIGAIAAAR 177
>gi|295137003|ref|YP_003587550.1| NADH dehydrogenase subunit 6 [Pisum sativum]
gi|293338575|gb|ADE43548.1| NADH dehydrogenase subunit 6 [Pisum sativum]
Length = 176
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 6/170 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
M ++ S VV + NPI+S FSL V + L++L + FVA L++
Sbjct: 6 TMHDFLLVFLGSGLLLGSLGVVLLTNPIFSAFSLGLVLVCISLLYILANSHFVAASQLLI 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAE 118
YVGA+ + +F +M ++ + G I + + + +
Sbjct: 66 YVGAINILIIFAVMFMNSSEYYQDLNLWTVGDGMTLIVCTSIFVSLITIISDTSWYGIIW 125
Query: 119 GELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + + IG L T + P E+ ILL+S+IGAIV+
Sbjct: 126 TTRPNQIIEQDLISTSQQIGIHLSTDFFLPFELISIILLVSLIGAIVVAR 175
>gi|290489884|gb|ADD31349.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Staphylea
colchica]
Length = 178
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 8/172 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ I+ VV NPIYS FSL V + ++ + FVA L++
Sbjct: 6 TIHDFLLVFLGSGLILGGLGVVLRTNPIYSAFSLGLVLVCISLFYIPSNSHFVAAAQLLI 65
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKK-----RGFLGSFFIGILAAELIVCASNFMVFS 116
YVGA+ + +F +M ++ + G I + + +
Sbjct: 66 YVGAINILIIFAVMFMNGSEYYKDFNLWTVGIGDGVTSLVCTSIFVSLITIILDTSWYGI 125
Query: 117 AEGELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+S+IGAI +
Sbjct: 126 IWTTRSNQIIEQDLINNSQQIGIHLSTDFFLPFELISIILLVSLIGAIAMAR 177
>gi|283780915|ref|YP_003371670.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pirellula
staleyi DSM 6068]
gi|283439368|gb|ADB17810.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Pirellula
staleyi DSM 6068]
Length = 370
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 21/190 (11%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
S F LF+ +A + V N + F L + +GLF L GAEFV + L++YV
Sbjct: 25 HSTLFVLFALLACGFAIAVAASSNIVRMAFYLTLSLGATSGLFFLAGAEFVGAMQLMIYV 84
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN---FMVFSAEGE 120
G +V +F +M+ V+ ++ + +G L+ ++
Sbjct: 85 GGTLVLLIFGVMLTAQARFVSMQTSAGEWVLAAVLGSSLLLLLFRSALGVPSWTTPRPDP 144
Query: 121 LSRLVFKGNNVENIGKVL------------------YTQYAYPLEISGFILLLSMIGAIV 162
+ ++ + IG L Y P + LL+ +IGA
Sbjct: 145 ENVVLADAHTSTEIGTALAGVRVDKLEQANEALIPGMAGYLMPFVVISMHLLVVLIGAGY 204
Query: 163 LMLRHRRDIK 172
+ R K
Sbjct: 205 MARTKRARSK 214
>gi|57923560|gb|AAW59520.1| NADH dehydrogenase subunit 6 [Pterygophora californica]
gi|58045448|gb|AAW65051.1| NADH dehydrogenase subunit 6 [Pterygophora californica]
Length = 311
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVQVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGALIFVLFLIAAIYS 110
>gi|18640458|ref|NP_570147.1| NADH-ubiquinone oxidoreductase chain 6 [Hypocrea jecorina]
gi|18496639|gb|AAL74172.1|AF447590_9 NADH-ubiquinone oxidoreductase chain 6 [Hypocrea jecorina]
Length = 256
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 41/202 (20%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++ V+ +NPI S+ SLI F + + +L G F+ L+VY+GAV +
Sbjct: 28 ILSVIALLFGIAVIVNKNPIASLLSLIGLFASISVYLILSGLTFIGFSYLIVYIGAVSIL 87
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV--------------- 114
FLFI+M+++I + + FI IL + + +
Sbjct: 88 FLFILMLINIRTSELQSNNINSIPLALFITILLNYALFQLLPYSIAIINSYNNKLSNIIY 147
Query: 115 --------------------------FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEI 148
F + + +++ IG +LYT Y L I
Sbjct: 148 YLPTSKYNDIITHISKNLDINTANVMFVTSNSWDGNMAETSHISTIGNILYTSYNMWLFI 207
Query: 149 SGFILLLSMIGAIVLMLRHRRD 170
+ FILLL+M+GAIV+ ++ R+
Sbjct: 208 ASFILLLAMVGAIVITIKQERN 229
>gi|268053559|ref|YP_003288918.1| NADH dehydrogenase subunit 6 [Saccharina japonica]
gi|268053598|ref|YP_003288956.1| NADH dehydrogenase subunit 6 [Saccharina religiosa]
gi|268053637|ref|YP_003288994.1| NADH dehydrogenase subunit 6 [Saccharina ochotensis]
gi|268053676|ref|YP_003289071.1| NADH dehydrogenase subunit 6 [Saccharina diabolica]
gi|226235325|dbj|BAH47633.1| NADH dehydrogenase subunit 6 [Saccharina japonica]
gi|262318179|dbj|BAI48504.1| NADH dehydrogenase subunit 6 [Saccharina japonica]
gi|262318218|dbj|BAI48542.1| NADH dehydrogenase subunit 6 [Saccharina religiosa]
gi|262318257|dbj|BAI48580.1| NADH dehydrogenase subunit 6 [Saccharina ochotensis]
gi|262318296|dbj|BAI48618.1| NADH dehydrogenase subunit 6 [Saccharina diabolica]
Length = 311
Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSTISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L F I A L +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYFGALIFAVFLSAAIYS 110
>gi|225155888|ref|ZP_03724373.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Opitutaceae
bacterium TAV2]
gi|224803341|gb|EEG21579.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Opitutaceae
bacterium TAV2]
Length = 178
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 78/170 (45%), Gaps = 6/170 (3%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L + ++++ +++RN I S L+ A++ A +L GAEFVA ++VYVGA+ +
Sbjct: 6 LIAAFTLVTAAAALSLRNIIRSAIFLVPAWIGIAAFYLWAGAEFVAFAQVLVYVGAISMV 65
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
LF +++ + ++ + A + + + + S +
Sbjct: 66 VLFAVVLTRRAPDDPAEEPATRRRLNWAVAAGGAVAAMIFAAILCTALPSPDSAALASDA 125
Query: 130 N------VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++++G L ++A + I+G +L ++++G+I+L + R
Sbjct: 126 PPPPSLTIKDLGHALTGEHAAAVLITGALLTVALLGSILLAATDKPRDAR 175
>gi|11465891|ref|NP_066440.1| NADH dehydrogenase subunit 6 [Ochromonas danica]
gi|10505224|gb|AAG18406.1|AF287134_31 NADH dehydrogenase subunit 6 [Ochromonas danica]
Length = 205
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
VV +PI SV LI AF A + L +F ++ +++YVGA+ V FLF++MML
Sbjct: 15 CGLFVVFSTSPIESVLFLILAFCIAGIILFLFNLDFFGIMFIIIYVGAIAVLFLFVVMML 74
Query: 78 DIDIEVAEPRKKRGFLGSFFIGI--------------LAAELIVCASNFMVFSAEGELSR 123
+I ++ + + + + + E+ ++ +++S
Sbjct: 75 NIKLQYNFLDRFTFKNIVYILIVLLLLYTIFLNLYSQIFIEMPFLFNSDLLYSYTIIEKG 134
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLES 182
+ +N++ G+VLY ++ + ++GFILL++++G IVL L + ++ +QL
Sbjct: 135 IFDHLSNIKVFGQVLYNYFSLYVPLAGFILLIALVGVIVLTLHFNKFKNKELDFRQLSR 193
>gi|290475909|ref|YP_003468804.1| NADH dehydrogenase I subunit J [Xenorhabdus bovienii SS-2004]
gi|289175237|emb|CBJ82040.1| NADH dehydrogenase I chain J [Xenorhabdus bovienii SS-2004]
Length = 175
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 85/166 (51%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ +AI+++ V+T N ++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFTFYVAGLVAILATLRVITHTNSVHALLYLITSLLALSVVFFSLGAYFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ V E + L + + A +++ F + + + +
Sbjct: 62 AIMVLFVFVVMMLNLGKSVVEQERAWLQLRVWIGPAILAAVLLIVLIFAI--SSLPTAEI 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + + +G L+ Y +E++ +LL ++ A + +R+
Sbjct: 120 SGEVVSAKEVGISLFGPYVLAVELASLLLLAGLVVAYHIGRENRQG 165
>gi|139389857|ref|YP_001123517.1| NADH dehydrogenase subunit 6 [Crucihimalaya wallichii]
gi|221272318|sp|A4QKY7|NU6C_CRUWA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134286719|dbj|BAF50342.1| NADH dehydrogenase ND6 [Crucihimalaya wallichii]
Length = 176
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + ++ ++ +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSTDFNLWTVGNGITSLVCTTILCLLMSTILDTSWYGVIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|159161214|ref|YP_001542500.1| NADH-plastoquinone oxidoreductase subunit 6 [Ceratophyllum
demersum]
gi|221272315|sp|A8SEF8|NU6C_CERDE RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|148508497|gb|ABQ81504.1| NADH-plastoquinone oxidoreductase subunit 6 [Ceratophyllum
demersum]
gi|227481172|emb|CAP62551.1| NADH dehydrogenase ND6 subunit [Ceratophyllum demersum]
Length = 176
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV PIYS FSL FV + ++ + FVA L++Y
Sbjct: 7 IHDILLVFLGSGLILGGLGVVLFTTPIYSAFSLGLVFVCISLFYIPSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGAV V +F +M ++ + G IL + +
Sbjct: 67 VGAVNVLIVFAVMFMNGSEYYKDFHLWTVGDGITSLVCTSILFSLITTILETSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +NV+ +G L T + P E++ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLTSNVQQMGIHLSTDFYLPFELTSIILLVALIGAIAMAR 175
>gi|313202847|ref|YP_004041504.1| NADH dehydrogenase subunit j [Paludibacter propionicigenes WB4]
gi|312442163|gb|ADQ78519.1| NADH dehydrogenase subunit J [Paludibacter propionicigenes WB4]
Length = 167
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ Q + FY+ + I S + VT + I S L+F + AGL+LLLG ++ + + V
Sbjct: 1 MAQQIIFYILGAIIAIFSIMAVTSKRIIRSATYLLFVLLATAGLYLLLGYNYLFAVQIAV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y G V+V F+F I++ + E + + + GI A + + + ++
Sbjct: 61 YAGGVMVLFIFAILLTNRPGESVKTELPIRRVAA---GITALAGVAFCGHIIYWNIRKVS 117
Query: 122 SRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + +G + QY P E +LL +IGAI++ +
Sbjct: 118 TLVAQADLTPQQLGHTMMGTEKYQYLLPFEAISILLLACIIGAIMIARKR 167
>gi|139388966|ref|YP_001123692.1| NADH dehydrogenase subunit 6 [Lepidium virginicum]
gi|221272329|sp|A4QLG2|NU6C_LEPVR RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134286896|dbj|BAF50517.1| NADH dehydrogenase ND6 [Lepidium virginicum]
Length = 176
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLFCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G IL + L
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSTDFNLWTVGNGITSLVCTTILFSLLSTILDTSWYGVIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|58045490|gb|AAW65072.1| NADH dehydrogenase subunit 6 [Lessonia flavicans]
gi|292385473|gb|ADE22028.1| NADH dehydrogenase subunit 6 [Lessonia vadosa]
gi|292385481|gb|ADE22034.1| NADH dehydrogenase subunit 6 [Lessonia vadosa]
Length = 311
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 51/108 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y GA+ V LF++MMLD+ + I + LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVTKKRFLYLGILLFLFFLIAVI 108
>gi|290489852|gb|ADD31333.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Lonicera
japonica]
Length = 176
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGLGFILGGLGVVLLPNPIYSAFSLGLVLVCISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRK---KRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M + + G + + +
Sbjct: 67 VGAINVLIIFAVMFMKGSEYYKDFHLLAVGDGLTAMVCTSLFVSLITTIPDTSWYGILWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+S+IGAI +
Sbjct: 127 TKSSQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVSLIGAIAVAR 175
>gi|290489848|gb|ADD31331.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Ehretia
acuminata]
Length = 176
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 68/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLPNPIYSAFSLGLVLVCISLFYILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + + + + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYKDFHLWTVGDGVTSMVCTSLFISLITTILDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E ILL+++IGAI +
Sbjct: 127 TKSNQIIEQDLISNSQQIGIHLSTDFFLPFEFISIILLVALIGAIAVAR 175
>gi|18652802|gb|AAL76100.1| NADH dehydrogenase subunit VI [Hypocrea pseudokoningii]
Length = 250
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 41/202 (20%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++ V+ +NPI S+ SLI F + + +L G F+ L+VY+GAV +
Sbjct: 22 ILSVIALLFGIAVIVNKNPIASLLSLIGLFASISVYLILSGLTFIGFSYLIVYIGAVSIL 81
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV--------------- 114
FLFI+M+++I + + FI IL + + +
Sbjct: 82 FLFILMLINIRTSELQSNNINSIPLALFITILLNYALFQLLPYSIAIINSYNNKLSNIIY 141
Query: 115 --------------------------FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEI 148
F + + +++ IG +LYT Y L I
Sbjct: 142 YLPTSKYNDIITHISKNLDINTANVMFVTSNSWDGNMAETSHISTIGNILYTSYNMWLFI 201
Query: 149 SGFILLLSMIGAIVLMLRHRRD 170
+ FILLL+M+GAI++ ++ R+
Sbjct: 202 ASFILLLAMVGAIIITIKQERN 223
>gi|319738248|emb|CBJ18024.1| NADH dehydrogenase subunit 6 [Ectocarpus siliculosus]
Length = 305
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + S + I V + +NP+YS L+ F +G+ LLG EF+A++ L+V
Sbjct: 1 MVDPIIFIIISCLGAILGVKVTSTQNPVYSGLYLVLLFFLGSGIAFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ L LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIENPWSAKKKRLVYAIGLTFLFFLIAVGWS 110
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVK 194
LY+ YA L I+G ILL++M+GAI L L+ + + +QL N++ +K K
Sbjct: 237 LYSTYAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAVFSIKEK 290
>gi|11466192|ref|NP_066515.1| NADH dehydrogenase subunit 6 [Naegleria gruberi]
gi|10444227|gb|AAG17793.1|AF288092_18 NADH dehydrogenase subunit 6 [Naegleria gruberi]
Length = 201
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 14/192 (7%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S + F F+AIIS+ +V V NPI +V LI F N + +F+LL +F+ ++ L++YVG
Sbjct: 2 SFLIFFFYFLAIISAICMVIVINPINAVLFLISVFFNTSMIFILLNVDFMGLLFLMIYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI-------------GILAAELIVCASN 111
A+ V FLFI+MML+I + + ++ +
Sbjct: 62 AIAVLFLFIVMMLNIKKIEKDNSFYLTVGSFILLFYFLQFFFIFFYDSLVYLPRVFNIDL 121
Query: 112 FMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
F + + ++ +G +LY +Y + L + L +M+GAI L +
Sbjct: 122 NSYFFSNFHFLDESMRFMLIKKMGFLLYYEYFFFLIFAALTLFAAMLGAIYLTNEKQGYS 181
Query: 172 KRQDISKQLESN 183
R +QL N
Sbjct: 182 MRHQY-QQLSRN 192
>gi|77164004|ref|YP_342529.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Nitrosococcus oceani ATCC 19707]
gi|254435897|ref|ZP_05049404.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Nitrosococcus oceani AFC27]
gi|76882318|gb|ABA56999.1| NADH dehydrogenase subunit J [Nitrosococcus oceani ATCC 19707]
gi|207089008|gb|EDZ66280.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Nitrosococcus oceani AFC27]
Length = 265
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/223 (18%), Positives = 84/223 (37%), Gaps = 56/223 (25%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
V+Q F +F+F++I + + T + S L+ +F+ AGLF+LL A+ +A++ +++
Sbjct: 6 VLQWAAFGIFAFISIAGALGMATTMSMFRSGIFLMASFIGVAGLFILLLADLLALLQIMM 65
Query: 62 YVGAVIVFFLFI----------IMMLDIDIEVAEPRKKRGFLGS---------------- 95
Y+G ++V LF+ +M + + E G S
Sbjct: 66 YIGGMLVMILFMLLFSGDPGGGMMSTHMRLRGPEWFFSLGLARSPSGTDGNNANDSSDKE 125
Query: 96 ------------------------------FFIGILAAELIVCASNFMVFSAEGELSRLV 125
LA + V +++ + +
Sbjct: 126 EDQRDQARDSHQEEGEKEESNDMSMFTPAKRGAAGLALGIGVLLIALLLWRPHWAVVAQM 185
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
++ IG +L +Y E +G ++LL + GA++L +
Sbjct: 186 PDPDSPRRIGHLLMDKYMIAFEGAGLLILLGIFGAVLLQRPGK 228
>gi|320354154|ref|YP_004195493.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfobulbus
propionicus DSM 2032]
gi|320122656|gb|ADW18202.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfobulbus
propionicus DSM 2032]
Length = 158
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+A++ + +V R+P+ S + ++ AGL+ LL A+ + + L+VY GA++ +FI
Sbjct: 2 LAVLGAAGLVLFRHPMNGAMSFVVTLISLAGLYALLSAKLIFALQLIVYAGAIMSLIVFI 61
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVEN 133
IM L+I + + + I+ + + + V+
Sbjct: 62 IMFLNIQPDDLPKEETKLLYIIGGSIIVLPVGLFLVKIVKSIPMSSA-ALIGNDFGGVKQ 120
Query: 134 IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+G +L+ + P EI +LL+S+IGA+VL +
Sbjct: 121 VGLLLFKDWLVPFEIVSILLLVSLIGAVVLAGKR 154
>gi|146221440|gb|ABQ11840.1| NADH dehydrogenase subunit 6 [Iphiteon panicea]
Length = 176
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 30 YSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKK 89
YS LI F+N + LF+LL EF+A++ ++VY GA+ + FLF IMML++ +
Sbjct: 24 YSAVWLILTFINISLLFILLEIEFIAILLIIVYAGAIAILFLFAIMMLNLHTKEQTSDST 83
Query: 90 RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEIS 149
I ++ + + +N E I +LY+ Y IS
Sbjct: 84 H----LLPINATIIISVIIIGINSSSHKLYNTTPQIKTLDNTETISSLLYSNYTPWFLIS 139
Query: 150 GFILLLSMIGAIVLMLRHRRDIKRQDISKQ 179
ILL+SMI IV++ + + + +Q + KQ
Sbjct: 140 SIILLISMIATIVIIQKEQINSIKQQLFKQ 169
>gi|110639003|ref|YP_679212.1| NADH:ubiquinone oxidoreductase subunit J [Cytophaga hutchinsonii
ATCC 33406]
gi|110281684|gb|ABG59870.1| NADH dehydrogenase subunit J [Cytophaga hutchinsonii ATCC 33406]
Length = 172
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 80/172 (46%), Gaps = 2/172 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F+ F+ + S+ +++ RN +Y+ +L+ + + A LF++ G++ +A++ LVVY
Sbjct: 1 MIEIVFFFFAIQLLSSALVILFTRNVVYAAIALMSSLLGVAALFVIAGSDLLAVVQLVVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VG V++ LF ++ D E +K S ++ A ++ + + F +
Sbjct: 61 VGGVLILLLFGVLYTYRDPESYFEKKHILL--SIVTVVVLAVGLLFLLSDLSFKYPQLHT 118
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+ + G + T++ E+ LL+ ++GA + K +
Sbjct: 119 SPYDEKGITKYTGYLWITEHIVVFEVVAIFLLVVLVGAGWVASNVLEKTKSE 170
>gi|261416725|ref|YP_003250408.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373181|gb|ACX75926.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 190
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY+ +F+ ++++ V V+N + S LIF+FV A L++L+ AEF+A+ ++
Sbjct: 11 MGGMDIAFYVVAFVILMTAVCCVAVKNILQSAVFLIFSFVTTAILYMLMHAEFIALAQVM 70
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVG V++F +F I++ E A K +F + I ++
Sbjct: 71 VYVGGVVIFVVFTILLTSHLGEDAFTTKMPRIFTAFALSIAFVF-VMVKCVLPTPDLASG 129
Query: 121 LSRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ ++++N L + P EI +LL+++I AI + R + DI
Sbjct: 130 IVNSPADYSSLQNFALRLLGNDPNGFIIPFEIVSVLLLMTLICAITVARRSKEDI 184
>gi|156598281|gb|ABU85402.1| NADH-plastoquinone oxidoreductase subunit 6 [Ginkgo biloba]
Length = 176
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
N IYS SL V + L++LL A+FVA +++YVGA+ V +F +M+++
Sbjct: 30 TNIIYSALSLGSVLVCISLLYILLNADFVAAAQILIYVGAINVLIVFAVMLMNNQKYPNS 89
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG------NNVENIGKVLY 139
G + ++ + + L+ + + NN++ IG L
Sbjct: 90 APPWTVGDGITSVVCMSLFCSLITIILNTSWSVISLTTELNQFLEQDLTNNIQRIGVHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLMLR 166
T + P E+ ILL++++GAI + R
Sbjct: 150 TDFILPFELISIILLITLVGAITMARR 176
>gi|139389151|ref|YP_001123868.1| NADH dehydrogenase subunit 6 [Nasturtium officinale]
gi|221272333|sp|A4QLY8|NU6C_NASOF RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134287074|dbj|BAF50693.1| NADH dehydrogenase ND6 [Nasturtium officinale]
Length = 176
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G IL + +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSTDSNLWTVGNGITSLVCTTILFSLMSTILDTSWYGVIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|268053715|ref|YP_003289122.1| NADH dehydrogenase subunit 6 [Saccharina longipedalis]
gi|226235329|dbj|BAH47635.1| NADH dehydrogenase subunit 6 [Saccharina longipedalis]
gi|262318335|dbj|BAI48656.1| NADH dehydrogenase subunit 6 [Saccharina longipedalis]
Length = 311
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 56/110 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS F L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGFYLVLLFFLGSTISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L F I A L +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYFGALIFAVFLSAAIYS 110
>gi|309322198|ref|YP_003934113.1| NADH-plastoquinone oxidoreductase subunit 6 [Geranium palmatum]
gi|197131414|gb|ACH47225.1| NADH-plastoquinone oxidoreductase subunit 6 [Geranium palmatum]
gi|300069291|gb|ADJ66412.1| NADH-plastoquinone oxidoreductase subunit 6 [Geranium palmatum]
Length = 176
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + N IYS FSL F+ + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNLIYSAFSLGLVFICISLFYILANSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ + LF +M ++ + G+ + L + ++ +
Sbjct: 67 VGAINILILFAVMFINGSEYSKDLNLGIVRDGATSLVCTTLFLSLISNILDTSWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +N + IG L T + P E+ ILL+++IG+I +
Sbjct: 127 TRATQIVEKDLISNSQQIGIRLSTDFFLPFELISIILLVALIGSIAVAR 175
>gi|57923552|gb|AAW59514.1| NADH dehydrogenase subunit 6 [Lessoniopsis littoralis]
gi|58045446|gb|AAW65050.1| NADH dehydrogenase subunit 6 [Lessoniopsis littoralis]
Length = 311
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L + LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGALMFVLFLIAAIYS 110
>gi|254032046|ref|YP_001023796.2| NADH dehydrogenase subunit 6 [Placozoan sp. BZ10101]
Length = 211
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 57/181 (31%), Positives = 84/181 (46%), Gaps = 47/181 (25%)
Query: 31 SVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKR 90
SVF LI F+ ++GLF++LG EF+ +I L+VYVGA+ + FLF+IMM+ + E + +
Sbjct: 26 SVFWLILTFIGSSGLFIVLGMEFLGLIFLIVYVGAICIIFLFVIMMIPGEKERKKGE-ET 84
Query: 91 GFLGSFFIGILAAELIV------------------------------------------- 107
G +G+ IGIL ++
Sbjct: 85 GRIGTPAIGILIGGILAAELASAVPDSIIKNYELTNILSDRNRDKSGLIGSEKESITTGI 144
Query: 108 ---CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ + + L+ G N+E IGKVLY Y Y + FILL++MIGAIVL
Sbjct: 145 KNNIETGYPYDYFDYFLTLNGSGGTNMEAIGKVLYINYYYAFILVSFILLVAMIGAIVLG 204
Query: 165 L 165
L
Sbjct: 205 L 205
>gi|188581794|ref|YP_001925239.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium populi BJ001]
gi|179345292|gb|ACB80704.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methylobacterium populi BJ001]
Length = 335
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 48/95 (50%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ F + +F+A+ + + T + S L+ +F+ AGLF+LL A+ + ++ +++Y
Sbjct: 5 FELTAFLVCAFVAVAGALGMTTTMSMFRSGIFLMASFIGVAGLFILLSADLIGLLQVMMY 64
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFF 97
+G +V LF+++++ L +F
Sbjct: 65 IGGFLVMILFMVLVMHDPGGAMMAGMDMAPLEHWF 99
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 107 VCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
V ++ A + V ++ +G +L +Y E +GF++L+ + GA++L
Sbjct: 222 VLVGMLVLRPAWPAMPEAVPDADSARRVGHLLMEKYMVAFEGAGFLILIGIFGAVLLAR 280
>gi|114107099|ref|YP_740255.1| NADH-plastoquinone oxidoreductase subunit 6 [Liriodendron
tulipifera]
gi|122221283|sp|Q0G9G6|NU6C_LIRTU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|113201047|gb|ABI32562.1| NADH-plastoquinone oxidoreductase subunit 6 [Liriodendron
tulipifera]
Length = 176
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV + NPIYS FSL V + + + FVA L++Y
Sbjct: 7 IHDILLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFHIPSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGAV V +F +M ++ + G IL + + +
Sbjct: 67 VGAVNVLIVFAVMFMNGSEYSKDLYLWTVGDGVTSLVCTSILFSLITTISDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +NV+ IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLTSNVQQIGIHLSTDFYLPFELISIILLVALIGAISMAR 175
>gi|167391857|ref|YP_001671735.1| NADH dehydrogenase subunit 6 [Carica papaya]
gi|221272314|sp|B1A987|NU6C_CARPA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|166344184|gb|ABY86834.1| NADH-plastoquinone oxidoreductase subunit 6 [Carica papaya]
Length = 176
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV NPIYS FSL F + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLFPNPIYSAFSLGFVLACISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + + L + + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYRDFNLWTIGDGITSLVCTSIFLSLITTILDTSWYGVIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + ++ + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRLNQILEQDLISSSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|58045476|gb|AAW65065.1| NADH dehydrogenase subunit 6 [Laminaria ephemera]
Length = 309
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLFYLGALIFLVFLIAAIYS 110
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+GAI L L+ + + +QL N++ +K K
Sbjct: 241 LYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAVFSIKEKP 295
>gi|139390005|ref|YP_001123604.1| NADH dehydrogenase ND6 [Draba nemorosa]
gi|221272322|sp|A4QL74|NU6C_DRANE RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134286807|dbj|BAF50429.1| NADH dehydrogenase ND6 [Draba nemorosa]
Length = 176
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Query: 25 VRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVA 84
+ NPI+S FSL F V + ++L + FVA L++YVGA+ V +F +M ++
Sbjct: 29 LPNPIFSAFSLGFVLVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYST 88
Query: 85 EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVL 138
+ G + + ++ + + + +N + IG L
Sbjct: 89 DFTLWTVGDGITSLVCTTLLFSLISTILDTSWYRVIWTTRLNQILEQDLISNSQQIGIHL 148
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+++IGAI +
Sbjct: 149 STDFFLPFELISIILLVALIGAISVAR 175
>gi|27904654|ref|NP_777780.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
gi|38372471|sp|Q89AT8|NUOJ_BUCBP RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|27904051|gb|AAO26885.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. Bp
(Baizongia pistaciae)]
Length = 164
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 1/164 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FFY S I+ + + RN +YS+ LI +FV + +F LGA F A + +++Y G
Sbjct: 2 EFFFYSSSLATIVFTVCSIFSRNLMYSLLYLILSFVFTSCVFFSLGATFAAALEVIIYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F IMM + K ++I L I+ F + S ++
Sbjct: 62 AIMVLFVFFIMMFNFKKSTLYAEKIFDKNNYYYINFLFLLCILIFPFFFILSY-LYKEKI 120
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ + + + L++ Y +E+S +LL ++I + R
Sbjct: 121 FYMVVSTKLVAIKLFSDYILVIELSSIVLLSALIIVSHIGKIRR 164
>gi|57923576|gb|AAW59532.1| NADH dehydrogenase subunit 6 [Nereocystis luetkeana]
gi|57923580|gb|AAW59535.1| NADH dehydrogenase subunit 6 [Nereocystis luetkeana]
gi|58045456|gb|AAW65055.1| NADH dehydrogenase subunit 6 [Nereocystis luetkeana]
Length = 311
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIAILGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ I L +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRFLYLGALIFLFFLTAVIYS 110
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+GAI L L+ + + +QL N++ VK KS
Sbjct: 243 LYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAVFSVKEKS 297
>gi|290489846|gb|ADD31330.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Dillenia
indica]
Length = 176
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Query: 25 VRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVA 84
+ NPI+S FSL V + ++ + FVA L++YVGA+ V +F +M ++
Sbjct: 29 LTNPIFSAFSLGLVLVCISLFYISANSHFVAAAQLLIYVGAINVLIIFAVMFMNGSEYYK 88
Query: 85 EPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVL 138
+ G I + + S + + + + + IG L
Sbjct: 89 DFHLWTIGDGISSLVCTSIFVSLITTIPDTSWYGIIWTTRSNQIIEQDLISNGQQIGIHL 148
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+++IGAI
Sbjct: 149 STDFVLPFELISIILLVALIGAIAAAR 175
>gi|12408587|ref|NP_074916.1| NADH dehydrogenase subunit 6 [Podospora anserina]
gi|400641|sp|P15959|NU6M_PODAN RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|13304|emb|CAA32648.1| unnamed protein product [Podospora anserina]
gi|14035|emb|CAA38769.1| NADH-ubiquinone oxidoreductase subunit 6 [Podospora anserina]
Length = 221
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/196 (25%), Positives = 87/196 (44%), Gaps = 36/196 (18%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+FS MA ++ V+ +NPI SV LI F + ++G F+ + ++VY+GAV +
Sbjct: 25 IFSIMAFLTGIYVILTKNPIVSVLFLILLFGGISSYLNIIGLNFIGLSYIIVYIGAVSIL 84
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV--------------- 114
FLFI+M+++I + + FIGI+ + + + +
Sbjct: 85 FLFILMLINIRTSELQSNTSNSIPLTIFIGIIFSNFLFPMLPYDIVMLSNFYNNYFSEDF 144
Query: 115 ---------------------FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
F V N++ IG ++YT Y L I+ FIL
Sbjct: 145 YTIDVNINDNNLNNLYNNVLYFMTSVIWDGSVIDFNHITAIGNIMYTIYNIWLIIASFIL 204
Query: 154 LLSMIGAIVLMLRHRR 169
LL+M+G+IV+ ++ R+
Sbjct: 205 LLAMVGSIVITIKQRK 220
>gi|290489876|gb|ADD31345.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Liquidambar
styraciflua]
Length = 176
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPI+S FSL V + ++ + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNPIFSAFSLGLVLVCISLFYISSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + +
Sbjct: 67 VGAINVLIIFAVMFMNDSGYYKDLNLWTVGDGVTSMVCTSIFVSLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|58045472|gb|AAW65063.1| NADH dehydrogenase subunit 6 [Laminaria yezoensis]
gi|226235344|dbj|BAH47621.1| NADH dehydrogenase subunit 6 [Laminaria yezoensis]
Length = 311
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGGLIFLFFLIAAIYS 110
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+GAI L L+ + + +QL N++ +K KS
Sbjct: 243 LYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAVFSIKEKS 297
>gi|139390208|ref|YP_001123780.1| NADH dehydrogenase subunit 6 [Lobularia maritima]
gi|221272330|sp|A4QLQ0|NU6C_LOBMA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134286985|dbj|BAF50605.1| NADH dehydrogenase ND6 [Lobularia maritima]
Length = 176
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + + ++ +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSTDFNLWTVGDGITSLVCTTILFSLISTILDTSWYGVIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +N + IG L T + P E+ ILL++++GAI +
Sbjct: 127 TRLNQLLEQDLISNSQQIGIHLSTDFFLPFELISIILLVALVGAISVAR 175
>gi|326402931|ref|YP_004283012.1| NADH-quinone oxidoreductase subunit J [Acidiphilium multivorum
AIU301]
gi|325049792|dbj|BAJ80130.1| NADH-quinone oxidoreductase subunit J [Acidiphilium multivorum
AIU301]
Length = 166
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
F + + +A++++ +++T + ++ + L + + A +F +LGA F A + +++Y GA++
Sbjct: 5 FVISAIIAVVATAMMITRPSAVHGLLYLTVSLLAVALVFFVLGAPFAAALEVIIYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F+F+IMML+I A ++ + A L+ + G L
Sbjct: 65 VLFVFVIMMLNIGEAAARLESSWLHPATWVGPSILALLLAIELGAVAV--SGGLPHPATS 122
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +G L Y +E++ F+LL ++ A L
Sbjct: 123 VISAHAVGVALVGPYMLAVELASFLLLAGLVAAFHLGR 160
>gi|121534368|ref|ZP_01666192.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Thermosinus
carboxydivorans Nor1]
gi|121307138|gb|EAX48056.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Thermosinus
carboxydivorans Nor1]
Length = 168
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
FY+ + + + ++ VV RN ++S L F+ AGL++LL A+F+A + ++VY GAV
Sbjct: 10 FYVLAALTLAAAAGVVFKRNLVHSALLLALTFIGVAGLYVLLQADFLAAVQVLVYNGAVA 69
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V + +M+ + + + + +I+ A +
Sbjct: 70 VIVVIGVMVTQRGDMKSSNPSNSLGWKAAAVAAVFTGMIIAAVAATPWPLAAAPPAAATA 129
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
E +L +A E + +LL++M+GAI+L
Sbjct: 130 PAIAE----ILLRDFAVAFETAAVLLLVAMMGAIILAK 163
>gi|110227131|ref|YP_665609.1| NADH dehydrogenase subunit 6 [Populus alba]
gi|134093259|ref|YP_001109560.1| NADH dehydrogenase subunit 6 [Populus trichocarpa]
gi|122237031|sp|Q14FA5|NU6C_POPAL RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|221272342|sp|A4GYW9|NU6C_POPTR RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|109945569|dbj|BAE97257.1| NADH dehydrogenase subunit 6 [Populus alba]
gi|133712121|gb|ABO36764.1| NADH-plastoquinone oxidoreductase chain 6 [Populus trichocarpa]
Length = 176
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Query: 25 VRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVA 84
+ NPI+S FSL V + ++L + FVA L++YVGA+ V LF +M ++
Sbjct: 29 LTNPIFSAFSLGLVLVCISLFYILSNSHFVAAAQLLIYVGAINVLILFAVMFMNGSEYYK 88
Query: 85 EPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVL 138
+ G + + + ++ + + + + V + IG L
Sbjct: 89 DFNLWTVGNGLTSLICTSLFVLLITIISNTTWYGIIWTTRANQIIEQDLVSNGQQIGIHL 148
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLML 165
T + P E ILL+++IGAI
Sbjct: 149 STDFFLPFEFISIILLVALIGAIATAR 175
>gi|58045464|gb|AAW65059.1| NADH dehydrogenase subunit 6 [Eisenia arborea]
Length = 311
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 53/110 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + V++ +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFIFIATFGGMLGIKVISTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ L I L+ +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSAKKKRLLYCGALIFLFFLVAVVYS 110
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
+LY+ +A L I+G ILL++M+GAI L L+ + + +QL N++ +K K
Sbjct: 241 YILYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAVFSIKEKP 297
>gi|225544175|ref|YP_002720165.1| ndhG [Jatropha curcas]
gi|224979616|gb|ACN72743.1| ndhG [Jatropha curcas]
Length = 176
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL F V + ++L + FVA L++YVGA+ V LF +M ++ +
Sbjct: 30 TNPIYSAFSLGFVLVCISLFYILSNSHFVAAAQLLIYVGAINVLILFAVMFMNGSEYYKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVLY 139
G I + + + + + + + + + + IG L
Sbjct: 90 FNLWTVGNGVTSLVCTSIFISLITIISDTSWYGIIWTTRTNQIIEQDLISNGQQIGIHLS 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P + ILL+++IGAI +
Sbjct: 150 TDFFLPFDFISVILLVALIGAIAVAR 175
>gi|118579076|ref|YP_900326.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Pelobacter
propionicus DSM 2379]
gi|118580055|ref|YP_901305.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Pelobacter
propionicus DSM 2379]
gi|118581585|ref|YP_902835.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Pelobacter
propionicus DSM 2379]
gi|118501786|gb|ABK98268.1| NADH dehydrogenase subunit J [Pelobacter propionicus DSM 2379]
gi|118502765|gb|ABK99247.1| NADH dehydrogenase subunit J [Pelobacter propionicus DSM 2379]
gi|118504295|gb|ABL00778.1| NADH dehydrogenase subunit J [Pelobacter propionicus DSM 2379]
Length = 164
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M +F FS +A+I + LV+T+R P+ +L+ + AG++ LGA +AM +++Y
Sbjct: 1 MIDVFIAFFSLLAVIFAALVLTLRQPMRCALALVSHMICLAGIYAALGAHVIAMFQVLIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV+VF ++ IM+LD + R + + +G+ A ++ A ++
Sbjct: 61 VGAVMVFMVYTIMLLDDRDDSYRHPYARKIVPAVVVGLGFAAVVWAAIGYLPAQPAAAA- 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGA 160
Y + E++ +LL+ ++ A
Sbjct: 120 -PAVDPFTFAAFSLSFMKYYWFHFELATVLLLIGVVAA 156
>gi|292385422|gb|ADE21990.1| NADH dehydrogenase subunit 6 [Ecklonia cava]
Length = 311
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 51/110 (46%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFIFIATLGGMLGIKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K L I L +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSSKEKRLLYCGALIFLFFLGAVMYS 110
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+GAI L L+ + + +QL N++ +K K
Sbjct: 243 LYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAVFSIKEKP 297
>gi|58045474|gb|AAW65064.1| NADH dehydrogenase subunit 6 [Laminaria solidungula]
Length = 311
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGSLIFIFFLIAAIYS 110
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+GAI L L+ + + +QL N++ +K K
Sbjct: 243 LYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAVFSIKEKP 297
>gi|328950040|ref|YP_004367375.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Marinithermus
hydrothermalis DSM 14884]
gi|328450364|gb|AEB11265.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Marinithermus
hydrothermalis DSM 14884]
Length = 187
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 1/141 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + I+++ VVT+RN +++ +L F+ A +++ L A F+ I ++VY GA++V
Sbjct: 7 VAGLLLILTAVAVVTLRNAVHAALALAGNFLVLAAVYMALDARFLGWIQVIVYAGAIMVL 66
Query: 70 FLFIIM-MLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM +L + + +G+L + A + + G
Sbjct: 67 FLFVIMLLLAARADTGVDPVPSLRPFAGVVGVLLLVGLGYAVTTFEPVQSLVETAPLLAG 126
Query: 129 NNVENIGKVLYTQYAYPLEIS 149
+ +G+ LY + Y +E+
Sbjct: 127 GTAQVVGEALYGPWLYAVELI 147
>gi|256371189|ref|YP_003109013.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Acidimicrobium ferrooxidans DSM 10331]
gi|256007773|gb|ACU53340.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Acidimicrobium ferrooxidans DSM 10331]
Length = 192
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 23 VTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIE 82
V+ R P+++ L+ A LF+ GA+F+A + +VVY GAV+V FLF+IM+L +D
Sbjct: 29 VSARQPVHAALFLVLTLFGVAILFIQEGAQFLAAVQVVVYAGAVVVLFLFVIMLLGVDRV 88
Query: 83 VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS--RLVFKGNNVENIGKVLYT 140
G+ +AA L+ + G S + G+N+ + + ++T
Sbjct: 89 EVSSIVGSGWRVWAAGIGVAAVLVELGLLAIGHEVTGASSLAGKLSAGSNLGVLARSVFT 148
Query: 141 QYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
Y P E++ +L++++IGA+VL R R+
Sbjct: 149 TYVLPFELTSVLLVIAVIGAVVLARRLRQRS 179
>gi|156598690|gb|ABU85600.1| NADH-plastoquinone oxidoreductase subunit 6 [Scaevola aemula]
Length = 176
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 6/145 (4%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
N I S FSL F V + ++L + FVA L++YVGA+ V +F +M ++ +
Sbjct: 31 NSIDSAFSLGFVLVCISLFYILSNSHFVAAAQLLIYVGAINVLIIFAVMFINSSENSKDF 90
Query: 87 RKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVLYT 140
R G + + L + + + + +N + IG L T
Sbjct: 91 RLWTVGDGVTSLVCTSLFLSLITTIPDTSWYRIIWTTKANQIIEQDLISNSQQIGIHLST 150
Query: 141 QYAYPLEISGFILLLSMIGAIVLML 165
+ P E ILL+++IGAIVL
Sbjct: 151 DFFLPFEFISIILLVALIGAIVLAR 175
>gi|58045470|gb|AAW65062.1| NADH dehydrogenase subunit 6 [Laminaria digitata]
Length = 311
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGAIIFLFFLIAAIYS 110
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+GAI L L+ + + +QL N+I +K KS
Sbjct: 243 LYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAIFSIKEKS 297
>gi|302327785|gb|ADL26986.1| NADH-quinone oxidoreductase, J subunit [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 180
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 85/175 (48%), Gaps = 5/175 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + FY+ +F+ ++++ V V+N + S LIF+FV A L++L+ AEF+A+ ++
Sbjct: 1 MGGMDIAFYVVAFVILMTAVCCVAVKNILQSAVFLIFSFVTTAILYMLMHAEFIALAQVM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVG V++F +F I++ E A K +F + I ++
Sbjct: 61 VYVGGVVIFVVFTILLTSHLGEDAFTTKMPRIFTAFALSIAFVF-VMVKCVLPTPDLASG 119
Query: 121 LSRLVFKGNNVENIGKVLYTQ----YAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ ++++N L + P EI +LL+++I AI + R + DI
Sbjct: 120 IVNSPADYSSLQNFALRLLGNDPNGFIIPFEIVSVLLLMTLICAITVARRSKEDI 174
>gi|7525088|ref|NP_051112.1| NADH dehydrogenase subunit 6 [Arabidopsis thaliana]
gi|2499298|sp|Q95695|NU6C_ARATH RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|1619279|emb|CAA67670.1| ndhG [Arabidopsis thaliana]
gi|5881749|dbj|BAA84440.1| NADH dehydrogenase ND6 [Arabidopsis thaliana]
Length = 176
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + ++ ++ +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSTDFNLWTIGNGITSLVCTTILFLLMSTILDTSWYGVIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|224026047|ref|ZP_03644413.1| hypothetical protein BACCOPRO_02800 [Bacteroides coprophilus DSM
18228]
gi|224019283|gb|EEF77281.1| hypothetical protein BACCOPRO_02800 [Bacteroides coprophilus DSM
18228]
Length = 171
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 3/169 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+Q + FY+ + + S L VT + + L+F ++ +LG F+ + L+V
Sbjct: 4 TLQEIVFYVVAAAIAVCSVLAVTTGKILRAATYLLFVLFGTGAIYGILGYTFLGAVQLMV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL--AAELIVCASNFMVFSAEG 119
Y G ++V ++F I++ D ++ + + ++ A L + +N +
Sbjct: 64 YAGGIVVLYVFSILLTQSDKDMKYRMNRAKLISVLLTTLVGAALVLFLVLTNGFALNMIP 123
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ L + + G Y Q+ P E+ +LL MIG I++ + +
Sbjct: 124 QGVELPVREIGLSLTGTGKY-QFILPFEVVSVLLLACMIGGILIARKDK 171
>gi|139387308|ref|YP_001123428.1| NADH dehydrogenase subunit 6 [Capsella bursa-pastoris]
gi|221272313|sp|A4QKP8|NU6C_CAPBU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134286629|dbj|BAF50253.1| NADH dehydrogenase ND6 [Capsella bursa-pastoris]
Length = 176
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + ++ ++ +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSTDFNLWTVGNGITSLVCTTILFLLMSTILDTSWYGVIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|57923564|gb|AAW59523.1| NADH dehydrogenase subunit 6 [Undaria pinnatifida]
gi|58045452|gb|AAW65053.1| NADH dehydrogenase subunit 6 [Undaria pinnatifida]
Length = 311
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + I V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVNPIIFILIITLGSILGIKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLSSLIFVIFLIAAIYS 110
>gi|156598541|gb|ABU85528.1| NADH-plastoquinone oxidoreductase subunit 6 [Passiflora biflora]
Length = 176
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 6/151 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I VV NPIYS FSL F V + ++L + FVA L++Y
Sbjct: 7 IHDFILVFLELGLIFGGLGVVLFTNPIYSAFSLGFVLVCISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V LF +M ++ G + + + + +
Sbjct: 67 VGAINVLILFTVMFMNGPEYSKGSNLWAVGNGVTSLVSTSIFVFLITFISDTTWYGIIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLE 147
+ +N E IG L T + P E
Sbjct: 127 TRENQILEQDLISNGEQIGIHLSTDFFLPFE 157
>gi|56791578|gb|AAW30327.1| NADH dehydrogenase subunit 6 [Agave attenuata]
Length = 158
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 11/153 (7%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL LLLG +F AMI+ VVY+GA+ V
Sbjct: 6 VLSSPALVSGLMVVRAKNPVHSVSFPIPVFRDTSGLLLLLGLDFSAMISPVVYIGAIAVS 65
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-----------NFMVFSAE 118
FLF++MM +I I R S IG++ +
Sbjct: 66 FLFVVMMFNIQIAEIHEEVLRYLPVSGIIGLILWWEMFFILDNETIPLLPTHRNTTSLRY 125
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGF 151
+ V N+E +G +LYT Y+ +
Sbjct: 126 TVYAGKVRSWTNLETLGNLLYTYYSVWFLVPSL 158
>gi|197245037|dbj|BAG69143.1| NADH dehydrogenase subunit 6 [Aureophycus aleuticus]
Length = 311
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILITTLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWFAKKKRLLYLGALIFVFFLIAVIYS 110
Score = 39.2 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+G I L L+ + + +QL N++ +K K
Sbjct: 243 LYSTHAILLIIAGVILLIAMVGXISLTLQKN---CPESLYRQLGRESKNAVFSIKEKP 297
>gi|139388149|ref|YP_001123340.1| NADH dehydrogenase ND6 [Barbarea verna]
gi|221272310|sp|A4QKG0|NU6C_BARVE RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134286540|dbj|BAF50165.1| NADH dehydrogenase ND6 [Barbarea verna]
Length = 176
Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G IL + +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSTDLNLWTVGNGITSLVCTTILFSLMSTILDTSWYGVIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISMAR 175
>gi|58045468|gb|AAW65061.1| NADH dehydrogenase subunit 6 [Laminaria sinclairii]
Length = 311
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFIIIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSVKKKRLLYLGAIIFIFFLIAAIYS 110
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+GAI L L+ + + +QL N+I +K KS
Sbjct: 243 LYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAIFSIKEKS 297
>gi|21450018|ref|NP_659280.1| NADH dehydrogenase subunit 6 [Laminaria digitata]
gi|21425343|emb|CAC87976.1| NADH dehydrogenase subunit 6 [Laminaria digitata]
Length = 311
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLGAIIFLFFLIAAIYS 110
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+GAI L L+ + + +QL N+I +K KS
Sbjct: 243 LYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAIFSIKEKS 297
>gi|307566016|ref|ZP_07628474.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
amnii CRIS 21A-A]
gi|307345204|gb|EFN90583.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
amnii CRIS 21A-A]
Length = 176
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 72/174 (41%), Gaps = 5/174 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ Q + F + + + + ++F V + + +L+F AG++ LL F+ + + +
Sbjct: 1 MAQIIMFAVLAVVILAAAFFSVLTSRIMRAATALLFVLFGVAGMYFLLDYTFLGTVQISI 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGI-LAAELIVCASNFMVFSAEGE 120
Y G + + ++F I +++ + G G+ + ++V A
Sbjct: 61 YAGGITMVYVFAIHLVNKQTLRGLSERWLGKRTFLAAGLAVVGFVVVAAVFLKNELLNAV 120
Query: 121 LSRLVFKGNNVENIGKVLYT----QYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+S V ++ IG L + Y P E LL +IG +V++ + +
Sbjct: 121 VSSSVKGEVPMQKIGTTLMSADKYGYVLPFEFISLFLLACIIGGLVILNKKNKK 174
>gi|139389472|ref|YP_001123168.1| NADH dehydrogenase subunit 6 [Olimarabidopsis pumila]
gi|221272339|sp|A4QJY5|NU6C_OLIPU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|134286366|dbj|BAF49993.1| NADH dehydrogenase ND6 [Olimarabidopsis pumila]
Length = 176
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + ++ ++ +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSTDFNLWTVGNGITSLVCTTILFLLMSTILDTSWYGVIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|56791558|gb|AAW30317.1| NADH dehydrogenase subunit 6 [Eichhornia crassipes]
Length = 159
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 11/139 (7%)
Query: 53 FVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS-- 110
F AMI VV++GA+ V FLF++MM +I I R S IG++ +
Sbjct: 21 FSAMIFPVVHIGAIAVSFLFVVMMFNIQIAEIHEXVLRYLPVSGIIGLILWWEMFFILDN 80
Query: 111 ---------NFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
+ V N+E +G +LYT Y+ + ILL++MIGAI
Sbjct: 81 ETIPLLPTHRNTTSLRYTVHAGKVRSWTNLETLGNLLYTYYSVWFLVPSLILLVAMIGAI 140
Query: 162 VLMLRHRRDIKRQDISKQL 180
VL + +KRQD+ ++
Sbjct: 141 VLTMHRTTKVKRQDVFRRN 159
>gi|305666191|ref|YP_003862478.1| NADH dehydrogenase I subunit J [Maribacter sp. HTCC2170]
gi|88707689|gb|EAQ99930.1| NADH dehydrogenase I, chain J [Maribacter sp. HTCC2170]
Length = 174
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + FY+ + + I+ + VT R + SV L+F AG++ L+ F+A I L VY
Sbjct: 1 MERIIFYVLAIIMIVFAIASVTSRKMLRSVIYLLFVLCGIAGIYFLIDYNFLAAIQLTVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
G +IV +F ++++ E K + + +L + + F+
Sbjct: 61 AGGIIVLIIFSVLLVHHIEMELEIAKTSKQILTAVACLLGLGVFLTTIYGHEFNVVENAL 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + P E+ +LL +MIGAI++ + K
Sbjct: 121 TTTTADIGAKLLSYG-EGGFILPFEVISVLLLAAMIGAIIIAKGKKLTDK 169
>gi|262400770|gb|ACY66259.1| NADH dehydrogenase subunit 6 [Brassica napus]
Length = 176
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILANSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + + ++ +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSIDFNLWTVGNGITSVVCTTILFSLISTILDTSWYGVIWT 126
Query: 123 RLVFK------GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + +N + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVAR 175
>gi|255961346|ref|YP_003097528.1| NADH dehydrogenase subunit 6 [Selaginella moellendorffii]
gi|254941518|gb|ACT89033.1| NADH dehydrogenase subunit 6 [Selaginella moellendorffii]
Length = 180
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 59/156 (37%), Gaps = 4/156 (2%)
Query: 17 ISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMM 76
+ S VV++ N ++ S + + A+F A + ++++ GAV V F M
Sbjct: 21 LGSLGVVSLVNIVHPAPSSGSVSACISLPHPSMNADFAAAVQILIHAGAVNVPIPFAAMP 80
Query: 77 LDIDIEVAEPRKKRGFLGS----FFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
+ + G ++ +++ + ++V+
Sbjct: 81 VSQPQYPHPAKPWTVGDGITSALRTSAFPPLINMILYTSWYRIFPIVLRNAGSSPTHSVQ 140
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
IG T+ P E +LL++++GAI + R +
Sbjct: 141 RIGSYSSTESLPPFEPPSIVLLVALVGAITVARREQ 176
>gi|91176238|ref|YP_537111.1| NADH dehydrogenase subunit 6 [Paracoccidioides brasiliensis]
gi|63081167|gb|AAY30330.1| NADH dehydrogenase subunit 6 [Paracoccidioides brasiliensis]
Length = 185
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 7/167 (4%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + I + +NP+ S+F LI F + + L+G EF+ + L+VY+GAV +
Sbjct: 19 ILYIICIFFGLYTILNKNPVISIFFLIGLFSSISCYLFLIGLEFIGLSYLLVYIGAVSIL 78
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF-------MVFSAEGELS 122
FLFI+M++++ I + + F IL ++ +++
Sbjct: 79 FLFILMLINLRISELTTKTTNSLPLAIFSFILFIFILNFNLPINTRDNPEIIYVISLNWD 138
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
++ + +IG +LYT Y+ L I ILLL+M+G+IV+ L +
Sbjct: 139 NILINNTQINSIGNILYTNYSLWLIILSVILLLAMVGSIVITLNKNK 185
>gi|58045466|gb|AAW65060.1| NADH dehydrogenase subunit 6 [Ecklonia radiata]
Length = 311
Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFIFIATLGGMLGIKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ L I L +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSSKKKRLLYCGALIFLIFLGAVGYS 110
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 134 IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKV 193
+ +LY+ +A L I+G ILL++M+GAI L L+ + + +QL N++ +K
Sbjct: 239 LSYLLYSTHAILLLIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAVFSIKE 295
Query: 194 KS 195
KS
Sbjct: 296 KS 297
>gi|58045492|gb|AAW65073.1| NADH dehydrogenase subunit 6 [Cymathaere triplicata]
Length = 311
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGVLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ + K+ L L+ +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAVESPWSAKKKRLLYLGALTFVFFLLATVYS 110
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
LY+ +A L I+G ILL++M+GAI L L+ + + +QL N+I +K K
Sbjct: 243 LYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAIFSIKEKP 297
>gi|148260116|ref|YP_001234243.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Acidiphilium
cryptum JF-5]
gi|146401797|gb|ABQ30324.1| NADH dehydrogenase subunit J [Acidiphilium cryptum JF-5]
Length = 166
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 2/158 (1%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
F + + +A++++ +++T + ++ + L + + A +F +LGA F A + +++Y GA++
Sbjct: 5 FVISAIIAVVATAMMITRPSAVHGLLYLTVSLLAVALVFFVLGAPFAAALEVIIYAGAIM 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F+F+IMML+I A ++ + A L+ + G L
Sbjct: 65 VLFVFVIMMLNIGEAAARLESSWLHPATWVGPSILALLLAIELGAVAV--SGGLRHPATS 122
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +G L Y +E++ F+LL ++ A L
Sbjct: 123 VISAHAVGVALVGPYMLAVELASFLLLAGLVAAFHLGR 160
>gi|226348833|gb|ACO50737.1| NADH dehydrogenase subunit 6 [Micromonas pusilla CCMP1545]
Length = 263
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 62/104 (59%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +F+F+A+++ F V+ +NP+YSV LI F N +G+ +LLG +F AM+ LVVYVGA+
Sbjct: 4 LFTIFAFLALVAGFCVIKAKNPVYSVLFLILVFCNVSGILVLLGLDFFAMVFLVVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
V FLF++MML++ + R G+L I+
Sbjct: 64 AVLFLFVVMMLNVKLAEINDNILRYLPVGGLFGLLFLGQILLVM 107
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 3/151 (1%)
Query: 45 LFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAE 104
L L+L V+ +L+ A+ VF L + L + + +
Sbjct: 111 LVLVLTRSSVSEWSLLEGGEAIGVFILMSSLHLVWSLMTQPLEMASAVHQWWEHASTLVD 170
Query: 105 LIVCASN---FMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
+ AS + + V +G+V+YT Y ++ ILL++MIGAI
Sbjct: 171 KMTMASTQSQVFSDMVYVVWPLFSEEISPVAALGQVVYTYYVVFFLVASLILLVAMIGAI 230
Query: 162 VLMLRHRRDIKRQDISKQLESNPDNSIVMVK 192
VL + +KRQ++ Q + ++ +K
Sbjct: 231 VLTMHKGVFVKRQEVWAQNLVDFSKTVSKIK 261
>gi|297790824|ref|XP_002863297.1| NADH dehydrogenase ND6 [Arabidopsis lyrata subsp. lyrata]
gi|297309131|gb|EFH39556.1| NADH dehydrogenase ND6 [Arabidopsis lyrata subsp. lyrata]
Length = 176
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 25 VRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVA 84
+ NPI+S FSL F V + L++L + FVA L++YVGA+ V +F +M ++
Sbjct: 29 LPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYST 88
Query: 85 EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK------GNNVENIGKVL 138
+ G + ++ ++ + + + +N + IG L
Sbjct: 89 DFNLWTVGNGITSLVCTTILFLLMSTILDTSWYGVIWTTKLNQILEQDLISNSQQIGIHL 148
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+++IGAI +
Sbjct: 149 STDFFLPFELISIILLVALIGAISVAR 175
>gi|108796692|ref|YP_636526.1| NADH dehydrogenase subunit 6 [Zygnema circumcarinatum]
gi|122211732|sp|Q32RK0|NU6C_ZYGCR RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|61393676|gb|AAX45818.1| subunit 6 of NADH-plastoquinone oxidoreductase [Zygnema
circumcarinatum]
Length = 181
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+L F + F ++ + VV + IYS L F F+ A L+LLL A+F+A +++YVG
Sbjct: 10 TLLFVVLEFAILVGALGVVLLSRVIYSALLLGFVFICVALLYLLLNADFLAAAQVLIYVG 69
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR- 123
AV V +F IM++ +V K G + S F I L+ + L+
Sbjct: 70 AVNVLIVFAIMLVSTPDDVKNKPKTTGEIISAFTFIALFVLLTIMIFTTSWDTHHNLATQ 129
Query: 124 ----LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
L +NV+ IG L T +P E+ +LL++++GAI + +++
Sbjct: 130 DEVLLQPLMSNVQTIGFHLLTDLLFPFELLSLLLLVALVGAITIASKNK 178
>gi|315465332|emb|CBQ72567.1| NADH:ubiquinone oxidoreductase chain 6 [Sporisorium reilianum]
Length = 226
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 60/133 (45%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + + AI+S LV+T +NP+ SV LI FVN AG +LLG F+ + L+VY
Sbjct: 1 MNNFLLDFLALGAILSGILVITSKNPVISVLFLISVFVNVAGYLVLLGVGFIGISYLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGAV V FLF+IMML++ + IL + L+ + +
Sbjct: 61 VGAVTVLFLFVIMMLNLQLTELSAVGNEYTQNLPLATILGSLLLFELVSVVPSFDGFYQL 120
Query: 123 RLVFKGNNVENIG 135
+G
Sbjct: 121 NSTATIFKSLGVG 133
>gi|58045434|gb|AAW65044.1| NADH dehydrogenase subunit 6 [Chorda filum]
Length = 311
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 55/110 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + + L +F+ + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIYILITFLGVCLGIKVTSTQNPVYSGLYLVLLFFLGSAIAFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ L A LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIEKPWSAKKKRLLYLVGVFFAFGLISVMLS 110
>gi|313679594|ref|YP_004057333.1| NADH dehydrogenase subunit j [Oceanithermus profundus DSM 14977]
gi|313152309|gb|ADR36160.1| NADH dehydrogenase subunit J [Oceanithermus profundus DSM 14977]
Length = 185
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + I S+ VT++N +++ +L+ F+ A ++ L A+F+ I ++VY GAV+V
Sbjct: 7 IAGVLLIASALAAVTLKNAVHAGLALVGNFLVLATVYFALEAQFLGWIQIIVYAGAVMVL 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
FLF+IM+L D + + ++ + A + A F L+ + G
Sbjct: 67 FLFVIMLL-FDAKADVGAGRMPWMRPIAAALAAVFFLALAYAFSGVGPVHPLAEIKLAGG 125
Query: 130 NVENIGKVLYTQYAYPLEISGFIL 153
+G++LY + Y + + +L
Sbjct: 126 LPGPLGQLLYGPWLYVVLLIAVLL 149
>gi|48478734|ref|YP_024341.1| NADH dehydrogenase subunit 6 [Saccharum hybrid cultivar SP-80-3280]
gi|50812597|ref|YP_054698.1| NADH dehydrogenase subunit 6 [Saccharum officinarum]
gi|118614545|ref|YP_899460.1| NADH-plastoquinone oxidoreductase subunit 6 [Sorghum bicolor]
gi|75255217|sp|Q6ENP4|NU6C_SACOF RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|75261504|sp|Q6L3D7|NU6C_SACHY RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|221272344|sp|A1E9X7|NU6C_SORBI RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|48478636|gb|AAT44656.1| NADH dehydrogenase subunit 6 [Saccharum hybrid cultivar SP80-3280]
gi|49659581|dbj|BAD27362.1| NADH dehydrogenase ND6 subunit [Saccharum hybrid cultivar NCo 310]
gi|118201179|gb|ABK79549.1| NADH-plastoquinone oxidoreductase subunit 6 [Sorghum bicolor]
Length = 176
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + + LL + FVA+ L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I I + + S + + NNV+ IG L
Sbjct: 90 KNYWTIGDGFTLLLCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELISLILLVSLIGAITMAR 175
>gi|11467258|ref|NP_043090.1| NADH dehydrogenase subunit 6 [Zea mays]
gi|1171828|sp|P46621|NU6C_MAIZE RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|902287|emb|CAA60351.1| NADH dehydrogenase ND6 [Zea mays]
Length = 176
Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + + LL + FVA+ L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I I + + S + + NNV+ IG L
Sbjct: 90 KNYWTIGDGFTLLLCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELISLILLVSLIGAITMAR 175
>gi|290489886|gb|ADD31350.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Trochodendron
aralioides]
Length = 176
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPIYS FSL V + + + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFHIPSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ + G I + +
Sbjct: 67 VGAINVLIIFAVMFMNGSEYYNDFHLWTVGDGVTSLVCTSIFVSLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 ARSNQIIEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAIAMAR 175
>gi|290489866|gb|ADD31340.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Cornus
florida]
Length = 176
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + N I+S FSL V + ++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGLGIILGGLGVVLLNNTIFSAFSLGLVLVCISLFYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ + +F +M ++ + G I + +
Sbjct: 67 VGAINILIIFAVMFMNGSEYHKDFYLWTVGDGVTSMVCTSIFVSLITTILDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQILEQDLINNSQQIGIHLSTDFFLPFELISIILLVALIGAIAVAR 175
>gi|115304399|ref|YP_762704.1| NADH:ubiquinone oxidoreductase subunit 6 [Ustilago maydis]
gi|121924030|sp|Q0H8W8|NU6M_USTMA RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|72256229|gb|AAZ67019.1| NADH:ubiquinone oxidoreductase subunit 6 [Ustilago maydis]
Length = 226
Score = 67.7 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 60/133 (45%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + + A++S LV+T +NP+ SV LI FVN AG +LLG F+ + L+VY
Sbjct: 1 MNNFLLDFLALGAVLSGILVITSKNPVISVLFLISVFVNVAGYLVLLGVGFIGISYLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+GAV V FLF+IMML++ + I+ + L+ + +
Sbjct: 61 IGAVTVLFLFVIMMLNLQLTELSAVGNEYTKNLPLATIIGSLLLFELVSVVPSFDGFYQL 120
Query: 123 RLVFKGNNVENIG 135
+G
Sbjct: 121 NSTTTIFKFLGVG 133
>gi|124302959|ref|YP_001023754.1| NADH dehydrogenase subunit 6 [Angiopteris evecta]
gi|221272308|sp|A2T386|NU6C_ANGEV RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|110628357|gb|ABG79653.1| NADH-plastoquinone oxidoreductase subunit 6 [Angiopteris evecta]
Length = 197
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
N +YS L F+ + L+L+L A+FVA +++YVGAV V +F +M++D +
Sbjct: 30 TNIVYSALLLGLVFICISLLYLVLNADFVAAAQVLIYVGAVNVLTVFAVMLIDKPKNITL 89
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG------NNVENIGKVLY 139
+ +++ +E +++ K +V+ IG L
Sbjct: 90 FSFSNVGDNITLGVCTSLFILLTIMIPDASWSEIYMTKQSTKFVEQGLTTDVQLIGSQLL 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLMLRHR 168
T++ P E+ +LL+++IGAI + + R
Sbjct: 150 TKFLLPFELLSILLLVALIGAITIARQER 178
>gi|187764076|ref|YP_001876525.1| NADH dehydrogenase subunit 6 [Dictyostelium fasciculatum]
gi|160688784|gb|ABX45199.1| NADH dehydrogenase subunit 6 [Dictyostelium fasciculatum]
Length = 241
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 43/235 (18%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ + + A++ + +V NPIYSV +LI FV + + +LL EF+A I ++
Sbjct: 1 MNVELMIMNIIIVGALVCLYNIVKNINPIYSVLNLIVMFVCYSSMLILLDQEFLACIFIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
V VGAV V FLFIIMM++I + + K+ F+G+ + + + +
Sbjct: 61 VNVGAVAVLFLFIIMMINITMVEIKENMKKYLPYITFMGLNIFMFLFIIGSRYMLTVPEN 120
Query: 121 LSRLVFK-------------------------------------GNNVENIG-KVLYTQY 142
++ V++ +++NIG +LY+
Sbjct: 121 MTEHVYEQFFTQLAKDNELSLGNVMKESYLININYVNIYELFIKTTDIKNIGANILYSSN 180
Query: 143 AYPLEISGFILLLSMIGAIVLMLR-----HRRDIKRQDISKQLESNPDNSIVMVK 192
+ ++ +LL++M+G I L + K Q++ Q+ + ++ ++
Sbjct: 181 SLWFVLACLMLLIAMVGVINLTDEFLNSTRFKGNKSQNLFHQISCDYVGNVKYIR 235
>gi|57923544|gb|AAW59508.1| NADH dehydrogenase subunit 6 [Alaria sp. LL01AP]
gi|57923568|gb|AAW59526.1| NADH dehydrogenase subunit 6 [Macrocystis integrifolia]
gi|58045458|gb|AAW65056.1| NADH dehydrogenase subunit 6 [Macrocystis integrifolia]
Length = 311
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 53/105 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFIIIATLGGTLGVKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI 106
Y GA+ V LF++MMLD+ + K+ L I LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIESPWSAKKKRLLYLVFLIFVLFLI 105
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKS 195
+LY+ +A L I+G ILL++M+GAI L L+ + + +QL N++ +K K
Sbjct: 241 YILYSTHAILLIIAGVILLIAMVGAISLTLQKN---CPESLYRQLGRESKNAVFFIKEKP 297
>gi|115604988|ref|YP_784440.1| NADH-plastoquinone oxidoreductase subunit 6 [Drimys granadensis]
gi|122164393|sp|Q06GU3|NU6C_DRIGR RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|112032716|gb|ABH88351.1| NADH-plastoquinone oxidoreductase subunit 6 [Drimys granadensis]
Length = 176
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ + I+ VV NPI+S FSL V + +L + FVA L++Y
Sbjct: 7 IHDILLVFLGSGLILGGLGVVLFTNPIFSAFSLGLVLVCISLFHILSNSYFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGAV V +F +M ++ + G IL + + +
Sbjct: 67 VGAVNVLIIFAVMFMNGSEYYNDFYLWTVGDGVTSLVCTSILFSLITTISDTSWYGIIWT 126
Query: 120 ELSRLVFK---GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + +NV+ IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TGSNQIIEQDLISNVQQIGIHLSTDFYLPFELISIILLVALIGAIAMAR 175
>gi|87306368|ref|ZP_01088515.1| NADH Dehydrogenase I Chain J [Blastopirellula marina DSM 3645]
gi|87290547|gb|EAQ82434.1| NADH Dehydrogenase I Chain J [Blastopirellula marina DSM 3645]
Length = 245
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 54/120 (45%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++FFYL SF+A + +V N + F L+ + +GL L GA FV + L++YV
Sbjct: 15 HTVFFYLTSFIACGFALAMVVSSNVVRMAFFLVLSLAATSGLIFLTGAHFVGAMQLMIYV 74
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
G +V +F +M+ ++ K ++ + +G L+ + + +
Sbjct: 75 GGTVVLLIFGVMLTAQQAFISMKTKAGDWILALIVGGSLLALLTQIAFSVPAWRSSDYQA 134
>gi|292385485|gb|ADE22037.1| NADH dehydrogenase subunit 6 [Lessonia vadosa]
gi|292385489|gb|ADE22040.1| NADH dehydrogenase subunit 6 [Lessonia vadosa]
gi|292385493|gb|ADE22043.1| NADH dehydrogenase subunit 6 [Lessonia vadosa]
gi|292385497|gb|ADE22046.1| NADH dehydrogenase subunit 6 [Lessonia vadosa]
gi|292385501|gb|ADE22049.1| NADH dehydrogenase subunit 6 [Lessonia vadosa]
Length = 311
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+Y L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYRGLYLVLLFFLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y GA+ V LF++MMLD+ + I + LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVTKKRFLYLGILLFLFFLIAVI 108
>gi|218508902|ref|ZP_03506780.1| probable NADH-ubiquinone oxidoreductase protein, chain J [Rhizobium
etli Brasil 5]
Length = 136
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Query: 33 FSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGF 92
+L+ F+N + +F+LL A F+A+I + VYVGA++V FLF+IMM+D+ V + G
Sbjct: 1 MALMACFLNISAIFVLLEAPFLAVIQIFVYVGAIMVLFLFVIMMIDVREAVLQRFLPGGN 60
Query: 93 LGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFI 152
L + + +L ++ + + G+ + + L+ Y P E + I
Sbjct: 61 LPALVLVVLLGVEMLVLVLW-SDRFSVIEPVAMRGGDQIRQLSTTLFADYLLPFEAASVI 119
Query: 153 LLLSMIGAIVLMLRHRR 169
LL +++GAIVL + +
Sbjct: 120 LLAALVGAIVLARKEQE 136
>gi|18860372|ref|NP_569688.1| NADH dehydrogenase subunit 6 [Psilotum nudum]
gi|75248907|sp|Q8WHX6|NU6C_PSINU RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|18389525|dbj|BAB84277.1| NADH dehydrogenase ND6 subunit [Psilotum nudum]
Length = 188
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/157 (24%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
S V+ + + + S FSL F++ + L+L+L A+FVA +++YVGA+ V +F +M++
Sbjct: 23 SMGVILLNDIVQSAFSLGLTFISISLLYLVLNADFVAAAQVLIYVGAINVLIVFSVMLIQ 82
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS-------RLVFKGNNV 131
+ + R + + + + + S + S S +NV
Sbjct: 83 KPHKNEDLSTSRNTGNNITLIVCTSLFLFLVSIILDTSWSQIYSIKKSTKIFEPILKSNV 142
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ IG L T++ P E+ +LL++++GAI + + R
Sbjct: 143 QLIGSQLLTEFLLPFELLSVLLLVALVGAITMSRQSR 179
>gi|229577807|ref|YP_002836143.1| NADH-plastoquinone oxidoreductase subunit 6 [Megaleranthis
saniculifolia]
gi|226933935|gb|ACO92068.1| NADH-plastoquinone oxidoreductase subunit 6 [Megaleranthis
saniculifolia]
Length = 177
Score = 67.4 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 6/147 (4%)
Query: 25 VRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVA 84
+ NPI+S FSL V + + + FVA L++YVGA+ V +F +M ++
Sbjct: 29 LTNPIFSAFSLGLVLVCTSLFHIPSNSHFVAAAQLLIYVGAINVLIVFAVMFMNGSEYYN 88
Query: 85 EPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIGKVL 138
+ G I + + S + + + + + IG L
Sbjct: 89 DFHLWTVGDGVTSLVCTSIFVSLITTIPDTSWYGIIWTTRSNQILEQDLINNGQQIGIHL 148
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+++IGAI +
Sbjct: 149 STDFFLPFELISIILLVALIGAIAMAR 175
>gi|189162324|ref|YP_001936570.1| NADH dehydrogenase subunit 6 [Fagopyrum esculentum subsp.
ancestrale]
gi|221272323|sp|B2XWJ4|NU6C_FAGEA RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|166065410|gb|ABY79785.1| NADH dehydrogenase subunit 6 [Fagopyrum esculentum subsp.
ancestrale]
Length = 176
Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ F I+ V+ NPI+S FSL V + +++ ++FVA L++Y
Sbjct: 7 IHDFLLVFFGSGLILGGLGVILFTNPIFSAFSLGLVLVCISLFYIIANSQFVASAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDI---DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V +F +M ++ D + G GI + +
Sbjct: 67 VGAINVLIIFAVMFINGLEYDKNLRLFTLGDGMTLVICTGIFFLLITTILNTSGYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TKLNQILEQDLINNSQQIGIHLSTDFFPPFELISIILLVALIGAIAVAR 175
>gi|27464565|gb|AAO16136.1| NADH dehydrogenase subunit 6 [Alcyonium variabile]
Length = 147
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 17/152 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V + L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
L+ + ++ + ++ N+E IG LYT Y + I+ +LL++MIGAI
Sbjct: 61 FYSLLTNSPKYI-------NNPVIGSRTNIEAIGSHLYTTYYELVLIASLVLLVAMIGAI 113
Query: 162 VLMLRHRRDIK----------RQDISKQLESN 183
+L + + RQD+ Q+
Sbjct: 114 LLAKQPNSPVLYNSHSESLRSRQDLFLQISRE 145
>gi|299737838|ref|XP_002910006.1| NADH dehydrogenase subunit 6 [Coprinopsis cinerea okayama7#130]
gi|298402998|gb|EFI26512.1| NADH dehydrogenase subunit 6 [Coprinopsis cinerea okayama7#130]
Length = 250
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 66/122 (54%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +++LF L +F ++SS L +T +NP+ SV LI FV+AAG +L+G +F+ + +V
Sbjct: 1 MNIKTLFINLLAFGTLLSSILTITAKNPVISVIFLISTFVSAAGYLILIGIQFLGLSYIV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVGA+ V FLF+IMM++I + + I+ + + + +
Sbjct: 61 IYVGAIAVLFLFVIMMINIKLTDILETGSQYTKNLPIAIIIGSVFLFIIFTIVPLNIYNV 120
Query: 121 LS 122
S
Sbjct: 121 PS 122
>gi|225874135|ref|YP_002755594.1| NADH dehydrogenase subunit J [Acidobacterium capsulatum ATCC 51196]
gi|225793660|gb|ACO33750.1| NADH dehydrogenase subunit J [Acidobacterium capsulatum ATCC 51196]
Length = 172
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 2/166 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ F++ +F+ + S+ +T+ I+ +L+ AF A L+L LGAEF + L+VYVG
Sbjct: 2 AVSFWILAFLTLASAVAAMTMARLIHCALALVLAFAGVATLYLNLGAEFAGLAQLLVYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
AV + +F I++ A P + F GS + A L + + ++
Sbjct: 62 AVAILIVFAILLTRSSEVTAMPAARTAFSGSLIALAVFAVLARAIISSRLVH--AAPAQP 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ V IG+ L Y PLE+ +L ++IGA+++ LR +
Sbjct: 120 IAPMATVRQIGEALMQPYVLPLEVLALLLTAALIGAVLIALREKPS 165
>gi|319789716|ref|YP_004151349.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermovibrio
ammonificans HB-1]
gi|317114218|gb|ADU96708.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermovibrio
ammonificans HB-1]
Length = 159
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F+YLF +A++ + + VT +N I +L+ FV GL+ +GAEF+ ++ ++VY
Sbjct: 1 MAEFFYYLFGVIAVVFAAVAVTAKNVIRGGVALLGTFVALGGLYFSVGAEFIGIVQVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA+IV +LF +M LD+ EP + F+ + +IV S +S
Sbjct: 61 GGAIIVLYLFALMTLDLKRMEGEPVRLFSVAAGGFLSLALVAIIVYGGFSFFGSVHPAVS 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + L+ ++ P E+ +LL++ IGA+ +
Sbjct: 121 TA-------KGLAGPLFYRFLLPFEVVSVLLLVATIGAVSVGR 156
>gi|260677470|ref|YP_003208252.1| NADH-plastoquinone oxidoreductase subunit 6 [Coix lacryma-jobi]
gi|209361408|gb|ACI43323.1| NADH-plastoquinone oxidoreductase subunit 6 [Coix lacryma-jobi]
Length = 176
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + + LL + FVA+ L++YVGA+ V +F +M + +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVSGSEWSKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I I + + S + + NNV+ IG L
Sbjct: 90 KNYWTIGDGFTLLLCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELISLILLVSLIGAITMAR 175
>gi|148358102|ref|YP_001249346.1| NADH:ubiquinone oxidoreductase subunit 6 [Gibberella zeae]
gi|86142501|gb|ABC86616.1| NADH:ubiquinone oxidoreductase subunit 6 [Gibberella zeae]
Length = 226
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 41/203 (20%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++ L++ +NPI SV LI F N + +L+G F+ + L+VY+GAV +
Sbjct: 23 IISITALLCGILIIINKNPIVSVIFLIGLFANISVYLILIGLTFIGLSYLIVYIGAVSIL 82
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF----------------- 112
FLFI+M+++I + + FI ILA I +
Sbjct: 83 FLFILMLINIRTSELQSNNRNSVSLGLFITILANFTIFQILPYYMAILNNYSSKLNTILY 142
Query: 113 ------------------------MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEI 148
++F + + + + IG +LYT + + +
Sbjct: 143 YLPWNKFSDILNYINKNIDITNANIMFVSSNSWDNNMAETGHTATIGHILYTSHNMWIFM 202
Query: 149 SGFILLLSMIGAIVLMLRHRRDI 171
+ FILLL+M GAI++ +++ + I
Sbjct: 203 ASFILLLAMTGAIIITIKNEKAI 225
>gi|27464589|gb|AAO16152.1| NADH dehydrogenase subunit 6 [Xenia sp. CSM-2002]
gi|27464592|gb|AAO16154.1| NADH dehydrogenase subunit 6 [Asterospicularia randalli]
Length = 154
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 17/151 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V + L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
L+ + ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI
Sbjct: 61 FYSLLTNSPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVIIASLVLLVAMIGAI 113
Query: 162 VLML----------RHRRDIKRQDISKQLES 182
+L RQD+ Q+
Sbjct: 114 LLAKQPNSPFLYNSHEESSRSRQDLFLQISR 144
>gi|118576849|ref|YP_876592.1| NADH-ubiquinone oxidoreductase, subunit J [Cenarchaeum symbiosum A]
gi|118195370|gb|ABK78288.1| NADH-ubiquinone oxidoreductase, subunit J [Cenarchaeum symbiosum A]
Length = 159
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 4/154 (2%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
M I S+ + +R+ IYS +L+ AG F LL + FVA+ + VYVG++ V LF
Sbjct: 1 MTIGSAIAALEMRSLIYSSIALMGTLGGIAGFFFLLDSPFVALFQIAVYVGSIAVLILFT 60
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVEN 133
+M++ ++ + +R G+ + + A + + +
Sbjct: 61 VMLVKRELIFTKVEDRRR----RLAGVGLMLVFMTAVGGIFLDSGIRAVTEGGGPVDFTE 116
Query: 134 IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+G T Y L + IL S+ G++VL R
Sbjct: 117 VGADFLTYYWPALILMALILAGSVTGSLVLARRE 150
>gi|292385426|gb|ADE21993.1| NADH dehydrogenase subunit 6 [Ecklonia radiata]
Length = 286
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 51/110 (46%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + + V + +NP+YS L+ F + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFIFIATLGGMLGIKVTSTQNPVYSGLYLVLLFFLGSAISFLLGLEFMALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF+ MMLD+ K+ L I L +
Sbjct: 61 YAGAIAVLELFVDMMLDVKAIERPWSSKKKRLLYCGALIFLIFLGAVGYS 110
>gi|303248407|ref|ZP_07334667.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
fructosovorans JJ]
gi|302490205|gb|EFL50123.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
fructosovorans JJ]
Length = 173
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 5/169 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M FYL S + +I++ L T RNP+++V + F+ AGLF++LGA ++ +V
Sbjct: 1 MTALGALFYLLSAVLLIAAGLAATRRNPVHAVCCAVVTFIATAGLFVVLGAPLPGVLEVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA++V FLFIIM+L + + V R + L V
Sbjct: 61 VYAGAIMVLFLFIIMLLGLPVGVGAVPAARLVVPGVIAAATLVALFALIGVDPVGRVMLP 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ +G VL+ Y +E IL ++ ++L R
Sbjct: 121 AALATPAA-----VGTVLFGTYWLAVEAVSIILFAALAAVLLLGRAKRE 164
>gi|301058805|ref|ZP_07199791.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [delta
proteobacterium NaphS2]
gi|300447090|gb|EFK10869.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [delta
proteobacterium NaphS2]
Length = 169
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 3/162 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + + + + V ++ + ++ LI + AG++LLL A F+A + +++YVG V
Sbjct: 8 AFLFYCLIIGAGAVMAVMSKSLVRALVGLIAVMIALAGMYLLLAAPFIAFMQILIYVGGV 67
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
V F IM+ AE + + L L+ +V +R
Sbjct: 68 SVLIFFAIML---SKASAEGDETGSVSLGRAVNALLCLLVPAVIFSVVIIYHPVTTRDAP 124
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ +G+ + Y P E+ +L +M GA++ R R
Sbjct: 125 LDVSPALLGEGMLGPYLLPFELISVVLFAAMAGAVLAAWRKR 166
>gi|27464562|gb|AAO16134.1| NADH dehydrogenase subunit 6 [Alcyonium sp. CSM-NZ2]
Length = 147
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V + L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
L+ + ++ + ++ N+E IG LYT Y + I+ +LL++MIGAI
Sbjct: 61 FYSLLTNSPKYI-------NNPVIGSRTNIEAIGSHLYTTYYELVLIASLVLLVAMIGAI 113
Query: 162 VLMLRHRRD----------IKRQDISKQLESN 183
+L + RQD+ Q+
Sbjct: 114 LLAKQPNSPFVYNPHGESLRSRQDLFLQISRE 145
>gi|156494382|ref|YP_001427408.1| NADH dehydrogenase subunit 6 [Phaeosphaeria nodorum SN15]
gi|156106289|gb|ABU49452.1| NADH dehydrogenase subunit 6 [Phaeosphaeria nodorum SN15]
Length = 198
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 16/179 (8%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L +AI+ LV+ +NPI SV LI F+ + +L G F+ + L+VY+GAV +
Sbjct: 20 LLYLIAILLGILVIISKNPIVSVLFLIGLFLCISVYLILTGLNFIGLSYLLVYIGAVSIL 79
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE----------- 118
FLFI+M++++ I + +G + +MV +
Sbjct: 80 FLFILMLINVRISELLIDSINSIPLAILVGSFFNYFVNNVLPYMVMTNNLLYHFSIKKNL 139
Query: 119 -----GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + +++ +IG +LY Y+ L I+ ILLL+M+GAIV+ L+ + +K
Sbjct: 140 TNVTSVSWDGYLAETSHITSIGNILYGHYSIWLIITSIILLLAMVGAIVITLKPQTHVK 198
>gi|50510208|dbj|BAD31376.1| chloroplast NADH dehydrogenase ND6 [Oryza sativa Japonica Group]
Length = 172
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NP +S FSL V + L + FVA+ L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPTFSAFSLGLVLVCIS----LFNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKD 85
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I I + + S + + NNV+ IG L
Sbjct: 86 KNFWTIGDGFTSLVCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLA 145
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 146 TDFYLPFELISIILLVSLIGAITMAR 171
>gi|308275209|emb|CBX31806.1| hypothetical protein N47_N26310 [uncultured Desulfobacterium sp.]
Length = 165
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 80/169 (47%), Gaps = 4/169 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F L + +FL V + ++++ L A G++L LG++FVAM+ L++Y
Sbjct: 1 MAQAAFVLMIVFTLAGAFLAVIPKKIVHNILGLALAMFGITGVYLYLGSQFVAMMQLLIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ + ++F IM+ E R + ++ M+ S + E
Sbjct: 61 VGAICMTYIFAIML----SPPLEKELPRRNKLKVITATAVSSIVFIVMVKMILSLKIEPI 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ +++ +G++L T+Y E+ +L +++IG+I++ R+
Sbjct: 117 ADATRDWSIKTLGQLLLTRYFLVFELISLLLAIAIIGSIMVASFVRKRN 165
>gi|290489854|gb|ADD31334.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Meliosma aff.
cuneifolia Moore 333]
Length = 176
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ I+ VV + NPI+S FSL V + + + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLILGGLGVVLLTNPIFSAFSLGLVLVCISLFHIPSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V LF +M + + + G I + +
Sbjct: 67 VGAINVLILFAVMFMSGSEYYNDFQLWTVGDGVTSLVCTSIFVSLITTIPDTSWYGIIWT 126
Query: 120 ELSRLVFKGNNV---ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
S + + + + + IG L T + P E+ ILL+++IGAI +
Sbjct: 127 TRSNQIIEQDLINNSQQIGIHLSTDFFLPFELISIILLVALIGAISMAR 175
>gi|153004150|ref|YP_001378475.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter sp. Fw109-5]
gi|152027723|gb|ABS25491.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Anaeromyxobacter sp. Fw109-5]
Length = 208
Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + FY+ + +A+ + V RN +YS L+ A + A GL++ L A+FVA+ L+V
Sbjct: 43 TVPGVIFYVLAAIAVAGAVGVAVSRNILYSALGLLMALLGAGGLYVFLSADFVAITQLLV 102
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G V+V LF +M+ +V G +G G L + +
Sbjct: 103 YIGGVLVLVLFAVMLTSRITDVKVSNTSFGPVG----GALLFVAAAPVLLAVALLTPWAV 158
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+IG T++ P E++ +LL +++GA+V+ +
Sbjct: 159 RIPDALAPTTASIGNAFLTRWLLPFEVASMVLLATLVGAVVIARKE 204
>gi|282881436|ref|ZP_06290110.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
timonensis CRIS 5C-B1]
gi|281304662|gb|EFA96748.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Prevotella
timonensis CRIS 5C-B1]
Length = 146
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Query: 29 IYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRK 88
+ + LIF AG++ LLG ++ + +Y G + + ++F I ++
Sbjct: 1 MRAATFLIFVLFGVAGIYFLLGYTYLGAAQIAIYAGGITILYIFAIQLVSKRTLQGLVEH 60
Query: 89 KRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYT----QYAY 144
+G + L + + +++ + IG+ L QY
Sbjct: 61 LKGSRVIQGALLSLIGLATVLGVLVKNQFIHQATQVADAEVPMNVIGQALVGSEKYQYVL 120
Query: 145 PLEISGFILLLSMIGAIVLMLRH 167
P E+ LL +IG +++ +
Sbjct: 121 PFELISVFLLACIIGGLLIARKE 143
>gi|315638071|ref|ZP_07893256.1| NADH-quinone oxidoreductase subunit J [Campylobacter upsaliensis
JV21]
gi|315481919|gb|EFU72538.1| NADH-quinone oxidoreductase subunit J [Campylobacter upsaliensis
JV21]
Length = 172
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 73/171 (42%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ L F +FS + + + V +N +YS+ +L V + + +L AEF+ I ++V
Sbjct: 1 MIEQLSFIVFSVLILGFFLVAVLSKNMLYSLSALAGGMVFLSSFYFMLDAEFLGAIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D + E K + + L S +
Sbjct: 61 YSGAVLGIYSFAMMFFDASKDFKERLKFKKSFFALIGLSLVGLFASLMSFKLNSVNVDLP 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL++++ AIVL + K
Sbjct: 121 FIDTALFDLNKQLAFAIFSKYLLAFEFVALLLLIALVCAIVLTHKELIKEK 171
>gi|58219954|gb|AAW67495.1| NADH dehydrogenase subunit 6 [Fusarium oxysporum]
gi|60499215|gb|AAX21838.1| NADH dehydrogenase subunit 6 [Fusarium oxysporum]
Length = 223
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 41/200 (20%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + A++ L++ +NPI SV LI F N + +L+G F+ + L+VY+GAV +
Sbjct: 23 IINITALLCGILIIINKNPIVSVIFLIGLFANISVYLILIGLTFIGLSYLIVYIGAVSIL 82
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF----------------- 112
FLFI+M+++I + + I ILA I +
Sbjct: 83 FLFILMLINIRTSELQSNNRNSVSLGLLITILANFTIFQVLPYYMAILNNYSSKLNTILY 142
Query: 113 ------------------------MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEI 148
++F + + + + IG +LYT + + +
Sbjct: 143 YLPWNKFSDILKYINRNLDITNANIMFVSSNSWDNNMAETGHTATIGHILYTSHNMWIFM 202
Query: 149 SGFILLLSMIGAIVLMLRHR 168
+ FILLL+M+GAI++ ++ +
Sbjct: 203 ASFILLLAMVGAIIITIKGK 222
>gi|281428806|ref|YP_003354985.1| NADH dehydrogenase subunit 6 [Pneumocystis carinii]
gi|270486323|gb|ACZ82946.1| NADH dehydrogenase subunit 6 [Pneumocystis carinii]
Length = 174
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
S ++I+ + LVVT +NP+ S+ LI F++ + L ++ + + VYVGA+ + F+
Sbjct: 9 SCLSILLAILVVTSKNPVLSLLYLIGLFIDIGVYLISLQLTYLGLSYITVYVGAIAMLFI 68
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI---------VCASNFMVFSAEGELS 122
F+IMML+I + ++ + + + ++ + + + +
Sbjct: 69 FVIMMLNIQVVESKKKTNYLRSIPLGLFLGSSLVFTLYLSLPREIIMEKYSHLFSYFSWE 128
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + VE +GKVLYT Y+ L + IL+L+++GAI +
Sbjct: 129 NRILNPSVVEILGKVLYTDYSLWLLLISLILVLAIVGAISIAAHK 173
>gi|27464553|gb|AAO16128.1| NADH dehydrogenase subunit 6 [Alcyonium coralloides]
gi|27464556|gb|AAO16130.1| NADH dehydrogenase subunit 6 [Alcyonium glomeratum]
gi|27464559|gb|AAO16132.1| NADH dehydrogenase subunit 6 [Alcyonium glomeratum]
Length = 147
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V + L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
L+ + ++ + ++ N+E IG LYT Y + I+ +LL++MIGAI
Sbjct: 61 FYSLLTNSPKYI-------NNPVIGSRTNIEAIGSHLYTTYYELVLIASLVLLVAMIGAI 113
Query: 162 VLMLRHRRD----------IKRQDISKQLESN 183
+L + RQD+ Q+
Sbjct: 114 LLAKQPNSPFLYNSHSESLRSRQDLFLQISRE 145
>gi|319412295|gb|ADV41832.1| NADH dehydrogenase subunit 6 [Bigelowiella natans]
Length = 193
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 13/191 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L + +IS+ LV+ RN +Y++ L+ F +A L + +G EF+ + +VVYVGA+ +
Sbjct: 3 LLAIFTLISATLVLISRNIVYALAFLVTTFFLSAVLLINIGLEFLGYVLIVVYVGAIAIL 62
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN-----------FMVFSAE 118
FLF++M LDI E + R G + A + F FS
Sbjct: 63 FLFVVMTLDITNEELASSQVRNSGGYTSHTVALAFFFFVLWSIYSTAAPIDALFEKFSFI 122
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ V + + LYT L ++G +LL++M+GA++L L R QD K
Sbjct: 123 QDPWVPVLHSGGAGAVAQTLYTHNFLYLFLAGLLLLVAMVGAVLLALPPVRLS--QDSYK 180
Query: 179 QLESNPDNSIV 189
Q P ++
Sbjct: 181 QAHRQPAKAVK 191
>gi|94962399|gb|ABF48517.1| NADH dehydrogenase subunit 6 [Trichoplax adhaerens]
Length = 308
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 62/139 (44%), Gaps = 15/139 (10%)
Query: 4 QSLFFYLFSFMAIISSFLVVTV---------------RNPIYSVFSLIFAFVNAAGLFLL 48
+ + F + S + +I++ + ++ N + SVF LI AF+ ++GLF++
Sbjct: 8 EDVLFIILSSITVIAAIMTISSGAIPKQSSAVTPIYSHNFLASVFWLILAFIGSSGLFIV 67
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
LG EF+ +I L+VYVGA+ + FLF+IMM+ V K + +
Sbjct: 68 LGMEFLGLIFLIVYVGAICIIFLFVIMMIPGGSFVGASGAKGAHFIFNWGSSPQSSKSGP 127
Query: 109 ASNFMVFSAEGELSRLVFK 127
++ F +
Sbjct: 128 STTFGRAQYKATFGGPAPS 146
Score = 41.5 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
G+N+E IG VLY Y Y + FILL++MIGAIVL L
Sbjct: 264 GGSNLEAIGSVLYINYYYVFILVSFILLVAMIGAIVLGL 302
>gi|11467053|ref|NP_042529.1| NADH dehydrogenase, subunit 6 [Acanthamoeba castellanii]
gi|6647619|sp|Q37371|NU6M_ACACA RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|562034|gb|AAD11822.1| NADH dehydrogenase, subunit 6 [Acanthamoeba castellanii]
Length = 260
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + +F F+A+ SF+++ +NPI+S+ LI F N + ++LG EF+A+I L+V
Sbjct: 1 MLTNYLLIIFCFLALFCSFMIIASKNPIHSILYLILVFCNVTFVLIILGVEFIAIIFLIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC---------ASNF 112
YVGA+ V FLF++MML+I I + R I +
Sbjct: 61 YVGAIAVLFLFVVMMLNIKILELDEVFWRYIPAGLLISSCFLFQLFTFVFNFSVVEVFGL 120
Query: 113 MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPL 146
++ +++L + + + L Y
Sbjct: 121 FFYNGFYSINKLALNFSEIHTVPSGLLINGIYIF 154
>gi|113170504|ref|YP_717295.1| nad6 [Ostreococcus tauri]
gi|112806911|emb|CAL36417.1| unnamed protein product [Ostreococcus tauri]
Length = 256
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 21 LVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDID 80
+V+ +NP+YSV LI F N AGL LLL +F A+I L+VYVGA+ V FLF++MMLDI
Sbjct: 20 MVIRSKNPVYSVLFLILVFCNTAGLLLLLNLDFFALIFLIVYVGAIAVLFLFVVMMLDIK 79
Query: 81 IEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYT 140
+ + FIG++ N E + + Y
Sbjct: 80 LAEMQESIFFYLPIGGFIGLIFFIEFYFLFNKEFVPLHLE----TLSTGSTSMLTLQFYV 135
Query: 141 QYAYPLEISGF 151
+ + GF
Sbjct: 136 YAFWAFVLYGF 146
>gi|71057052|emb|CAJ18331.1| NADH dehydrogenase subunit 6 [Secale cereale]
Length = 220
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 10/114 (8%)
Query: 85 EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL----------VFKGNNVENI 134
E + + I E+ N + + V N+E +
Sbjct: 7 EEVLRYLPVSGIIGLIFWWEMFFILDNETIPLLPTHRNTTSLRYTVYAGKVRSWTNLETL 66
Query: 135 GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSI 188
G +LYT Y+ +S ILL++MIGAIVL + +KRQD+ ++ + +I
Sbjct: 67 GNLLYTYYSVWFLVSSLILLVAMIGAIVLTMHGTTKVKRQDVFRRNALDSRRTI 120
>gi|164422132|ref|YP_001648746.1| NADH dehydrogenase subunit 6 [Mycosphaerella graminicola]
gi|155964395|gb|ABU40262.1| NADH dehydrogenase subunit 6 [Mycosphaerella graminicola]
Length = 225
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 54/98 (55%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F +II LV+ +NP+ SV LI F+N AG ++LG F+ + L+VYVGAV +
Sbjct: 22 IITFASIICGILVIISKNPVVSVLFLIGLFLNIAGYLMMLGINFIGLSYLLVYVGAVSIL 81
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
FLFI+M++++ I + IG + +
Sbjct: 82 FLFILMLINVRISELVTDNNNSIPLAIMIGSIFNLTLY 119
>gi|187373198|ref|YP_001876510.1| NADH dehydrogenase subunit 6 [Beauveria bassiana]
gi|164598942|gb|ABY61760.1| NADH dehydrogenase subunit 6 [Beauveria bassiana]
Length = 212
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 30/192 (15%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++ V+ +NPI S+ LI F + + +L G F+ L+VY+GAV +
Sbjct: 20 ILSVIAVLFGITVIINKNPIGSLLFLIGLFASISVYLILSGLTFIGFSYLIVYIGAVSIL 79
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------------------- 107
FLFI+M+++I + + FIGIL +
Sbjct: 80 FLFILMLINIRTSELQSNNVNSIPLALFIGILWNYSLFQLLPYTLSINTNNWLLGSYNYN 139
Query: 108 --------CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
++ ++F + + +++ IG +LYT Y L +S ILLL+M G
Sbjct: 140 NILPTVNNIDTSNIMFVTSNNWDGTMTETSHISTIGNILYTSYNMWLFLSSIILLLAMTG 199
Query: 160 AIVLMLRHRRDI 171
AI++ ++
Sbjct: 200 AIIITIKQDSRN 211
>gi|27544895|ref|NP_775410.1| NADH dehydrogenase subunit 6 [Lecanicillium muscarium]
gi|27450727|gb|AAO14669.1|AF487277_15 NADH dehydrogenase subunit 6 [Lecanicillium muscarium]
Length = 214
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++ V+ +NPI S+ LI F + + +L G F+ L+VY+GAV +
Sbjct: 24 ILSVIAVLFGITVIVNKNPIGSLLFLIGLFASISVYLILSGLTFIGFSYLIVYIGAVSIL 83
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------------------- 107
FLFI+M+++I + + FIGIL +
Sbjct: 84 FLFILMLINIRTSELQSNNVNSIPLALFIGILWNYSLFQLLPYTLSINTNNWLLGSYNYN 143
Query: 108 --------CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
++ ++F + + +++ IG +LYT Y L +S ILLL+M+G
Sbjct: 144 NVLPAVHNIDTSNIMFVTSNNWDGTMTETSHISTIGNILYTSYNMWLFLSSIILLLAMVG 203
Query: 160 AIVLMLRHRRD 170
AI++ ++ +
Sbjct: 204 AIIITIKQENN 214
>gi|156122204|gb|ABU50164.1| NADH dehydrogenase subunit 6 [Cordyceps bassiana]
Length = 212
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 30/192 (15%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++ V+ +NPI S+ LI F + + +L G F+ L+VY+GAV +
Sbjct: 20 ILSVIAVLFGITVIINKNPIGSLLFLIGLFASISVYLILSGLTFIGFSYLIVYIGAVSIL 79
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------------------- 107
FLFI+M+++I + + FIGIL +
Sbjct: 80 FLFILMLINIRTSELQSNNVNSIPLALFIGILWNYSLFQLLPYTLSINTNNWLLGSYNYN 139
Query: 108 --------CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
++ ++F + + +++ IG +LYT Y L +S ILLL+M G
Sbjct: 140 NILPTVNNIDTSNIMFVTSNNWDGTMTETSHISTIGNILYTSYNMWLFLSSIILLLAMTG 199
Query: 160 AIVLMLRHRRDI 171
AI++ ++
Sbjct: 200 AIIITIKQESRN 211
>gi|15616782|ref|NP_239994.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219681537|ref|YP_002467922.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682093|ref|YP_002468477.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471218|ref|ZP_05635217.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|11133972|sp|P57260|NUOJ_BUCAI RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|25285206|pir||H84948 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain J [imported] -
Buchnera sp. (strain APS)
gi|10038845|dbj|BAB12880.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219621826|gb|ACL29982.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624380|gb|ACL30535.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311085904|gb|ADP65986.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086477|gb|ADP66558.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087058|gb|ADP67138.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087615|gb|ADP67694.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 170
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY+ SF A++S+F V+ +N +YS+ LI + ++ AG+F LGA F + +++Y G
Sbjct: 2 EFVFYVCSFAAVVSTFFVIIQKNAVYSLVYLIISLLSIAGVFFSLGAFFAGSLEVIIYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A+IV F+F+IMML+I + + + + +++ + + +F + +
Sbjct: 62 AIIVLFVFVIMMLNISDKYNLEEAHYLKPRFWIGPSILSLILLLSMTYAIFFLRDKK--I 119
Query: 125 VFKGNNVENIGKVLYTQYAY 144
+ + +G L+ Y +
Sbjct: 120 DGFLIDSKIVGINLFGPYVF 139
>gi|295065782|ref|YP_003587722.1| NADH dehydrogenase subunit 6 [Anomochloa marantoidea]
gi|251765306|gb|ACT15460.1| NADH dehydrogenase subunit 6 [Anomochloa marantoidea]
Length = 176
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
NPIYS FSL V + +LL + VA+ ++YVGA+ V L +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYLLWNSYLVAVAQFLIYVGAINVLILLAVMFVNSSEWFKD 89
Query: 86 PRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN---NVENIGKVLY 139
GF I + + S + + N++ IG L
Sbjct: 90 QNYWTIGDGFTSLVCTTIPFSLMATIPDTSWYGILWTTRSNQIVEQGLNNNLQQIGIHLA 149
Query: 140 TQYAYPLEISGFILLLSMIGAIVLML 165
T + P E+ ILL+S+IGAI +
Sbjct: 150 TDFYLPFELISLILLVSLIGAITMAR 175
>gi|290489860|gb|ADD31337.1| NADH-plastoquinone oxidoreductase subunit 6 protein [Rhododendron
simsii]
Length = 177
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 6/132 (4%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
V+ + NPIYS FSL F + + ++L + FVA +++YVGA+ V +F +M ++
Sbjct: 26 VILLPNPIYSAFSLGLVFFSISFFYILSNSHFVAAAQILIYVGALNVLIIFAVMFMNGSE 85
Query: 82 EVAEPRKK---RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV---ENIG 135
+ G I + + S + + + + + IG
Sbjct: 86 YYKDFYLWTVGDGITSLVCTSIFVSLITTILDTSWYGIIWATRSNQILEQDLISNSQQIG 145
Query: 136 KVLYTQYAYPLE 147
L T + P E
Sbjct: 146 IHLSTDFFLPFE 157
>gi|57168325|ref|ZP_00367459.1| NADH-ubiquinone oxidoreductase, NQO10 subunit (NQO10)
[Campylobacter coli RM2228]
gi|57020133|gb|EAL56807.1| NADH-ubiquinone oxidoreductase, NQO10 subunit (NQO10)
[Campylobacter coli RM2228]
Length = 171
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 74/171 (43%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ L F FS + + + V +N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIEILAFTFFSVVVLGFFLVAVLSKNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E + + I L + A
Sbjct: 61 YSGAVLGLYSFAMMFFDSSKEFKEKLRAKKSFFLLVILSAVLLLFMLLGFKHQNIAGDLA 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL+++I AIVL + +
Sbjct: 121 LSDPNLFDYNKQLAFAIFSKYLLAFEFIAILLLIALICAIVLTHKELTKER 171
>gi|4261644|gb|AAD13944.1|S64009_1 NADH dehydrogenase subunit 6 [Marchantia polymorpha]
Length = 109
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 44/104 (42%), Positives = 62/104 (59%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ FY+F +A++S +V+ +NP++SV LI F N +GL +LLG +F AMI LVVYVGA
Sbjct: 2 ILFYVFVVLALVSGAMVIRAKNPVHSVLFLILVFCNTSGLLVLLGLDFFAMIFLVVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+ V FLF++MML I IE R IG++ I
Sbjct: 62 IAVLFLFVVMMLHIRIEEIHENVLRYLPVGGIIGLIFLLEIFLM 105
>gi|189095565|ref|YP_001936271.1| NADH dehydrogenase subunit 6 [Aphrocallistes vastus]
gi|150024083|gb|ABR58844.1| NADH dehydrogenase subunit 6 [Aphrocallistes vastus]
Length = 188
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 2/166 (1%)
Query: 20 FLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDI 79
LV + R I V LI F+N + L +LL EF+A+ ++VYVGA+ + F+FIIM+L++
Sbjct: 14 LLVTSSRRTINRVIWLILRFINTSLLLILLKLEFIAIFIIIVYVGAIAILFIFIIMILNL 73
Query: 80 DIEVAEPRKKRGFLGSFFIGILAAELI--VCASNFMVFSAEGELSRLVFKGNNVENIGKV 137
+ + + I I I + + + E ++ + N+E I +
Sbjct: 74 RNQKHKKSRNHLIPIRLIIRITLILHITEIIKKRKINNNQERISNKQIINLRNLEIIRNL 133
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESN 183
+Y+ Y L I ILLL M+ AI++ + +Q + Q++
Sbjct: 134 IYSNYCEWLIIRRAILLLRMLTAILISEKENTQNIKQQLFTQIQRT 179
>gi|146307443|ref|YP_001187908.1| NADH dehydrogenase subunit J [Pseudomonas mendocina ymp]
gi|145575644|gb|ABP85176.1| NADH dehydrogenase subunit J [Pseudomonas mendocina ymp]
Length = 169
Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY + +A+ ++ VVT NP++++ LI + + + +F LGA F + ++VY G
Sbjct: 2 EFAFYFAAGVAVAATVGVVTNTNPVHALLYLIVSLLAVSMVFFALGAPFAGALEIIVYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + +K G +IG ++ V A+ + +
Sbjct: 62 AIMVLFVFVVMMLNLGPAAVDQERKWLAPG-IWIGPALLSALLLGQLLYVLLAQPGDATI 120
Query: 125 VFKGNNVENIGKVLYTQY 142
+ +G L+ Y
Sbjct: 121 GHASVEAKAVGISLFGPY 138
>gi|197935768|ref|YP_002213611.1| NADH dehydrogenase subunit 6 [Cordyceps brongniartii]
gi|156122225|gb|ABU50184.1| NADH dehydrogenase subunit 6 [Cordyceps brongniartii]
Length = 212
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 30/192 (15%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++ V+ +NPI S+ LI F + + +L G F+ L+VY+GAV +
Sbjct: 20 ILSVIAVLFGITVIINKNPIGSLLFLIGLFASISVYLILSGLTFIGFSYLIVYIGAVSIL 79
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------------------- 107
FLFI+M+++I + + FIGIL +
Sbjct: 80 FLFILMLINIRTSELQSNNVNSIPLALFIGILWNYSLFQLLPYTLSINTNNWLLGSYNYN 139
Query: 108 --------CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
++ ++F + + +++ IG +LYT Y L +S ILLL+M G
Sbjct: 140 NILPIVNNIDTSNIMFVTSNNWDGTMTETSHISTIGNILYTSYNMWLFLSSIILLLAMTG 199
Query: 160 AIVLMLRHRRDI 171
AI++ ++
Sbjct: 200 AIIITIKQDSRN 211
>gi|39937316|ref|NP_949592.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Rhodopseudomonas palustris CGA009]
gi|39651174|emb|CAE29697.1| NADH-ubiquinone dehydrogenase chain J [Rhodopseudomonas palustris
CGA009]
Length = 168
Score = 64.7 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M SL A+IS+ + VT N ++++ L+ + A F LGA F A++ +++Y
Sbjct: 1 MSSLLAIYAGAFALISAAVSVTRPNAVHALLYLVVTLLALAVCFFALGAAFAAVLLIMIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F++M L I E + L + V VF G +
Sbjct: 61 AGAIVVLFVFVVMTLPISPESITRERALLRRAWP----LPVLMSVLIVAPFVFGEIGLKA 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + +GK+L+ +A +E++ +L+ +IG + R
Sbjct: 117 TGQPAPVSAQEVGKLLFGPWALAVELASLLLMAGLIGVRHIGRNDRS 163
>gi|77019999|ref|YP_337883.1| NADH dehydrogenase subunit 6 [Aspergillus niger]
gi|75993219|gb|ABA33724.1| NADH dehydrogenase subunit 6 [Aspergillus niger]
Length = 217
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 37/196 (18%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMI-TLVVYVGAVIV 68
++I+ RNP+ S LI FV+ AG+ +L+G + + + ++VYVGA
Sbjct: 22 FIYIISILFGIFTTISRNPLVSAVFLIGVFVDIAGVLILVGDDDIGVSSYILVYVGAAAT 81
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS------ 122
FL I+M++++ I R + L ++ + S
Sbjct: 82 LFLLILMLINMRISELVSETNRDTPWAVITVSLFYFIMGQVTPSNFTDNTIVTSSSTSFS 141
Query: 123 ------------------------------RLVFKGNNVENIGKVLYTQYAYPLEISGFI 152
+ + ++ IG +YT Y+ L IS I
Sbjct: 142 EVYDLQVDDEILNIVDLQQETASASSKSGDTSLVELPHLSGIGNSMYTNYSLWLIISSVI 201
Query: 153 LLLSMIGAIVLMLRHR 168
LL+ M+GAIV+ ++ +
Sbjct: 202 LLVGMVGAIVITIKQK 217
>gi|327179837|ref|YP_004327734.1| NADH dehydrogenase subunit 6 [Placozoan sp. 'Shirahama']
gi|298561256|dbj|BAJ09639.1| NADH dehydrogenase subunit 6 [Placozoan sp. 'Shirahama']
Length = 278
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 4 QSLFFYLFSFMAIISSFLVVT---------------VRNPIYSVFSLIFAFVNAAGLFLL 48
+ + F + S + + ++ + + N + SVF LI F+ ++GLF++
Sbjct: 8 EDILFIILSSVTVTAAIMTIRGALVSPASSAVTPTYSYNFLASVFWLILTFIGSSGLFIV 67
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGF 92
LG EF+ +I L+VYVGA+ + FLF+IMM+ + + K F
Sbjct: 68 LGMEFLGLIFLIVYVGAICIIFLFVIMMIPGGDQKEKETKGYSF 111
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
AA L + N ++ + + G N+E IG VLY Y Y + FILL++MIGAI
Sbjct: 211 AAALNLAQQNPLLGPNDSFFTLNGSGGTNLEAIGSVLYINYYYAFILVSFILLVAMIGAI 270
Query: 162 VLML 165
VL
Sbjct: 271 VLGR 274
>gi|300087938|ref|YP_003758460.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527671|gb|ADJ26139.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 162
Score = 64.3 bits (155), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
L F++F+ I ++ VV RN + LI F AGLF+ L A+F+A I +++YVG
Sbjct: 2 ELAFFIFASGIIGTALAVVLFRNIFRASLMLILCFFLVAGLFVTLYADFLAAIQVLIYVG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++ + + IM+ + R G+ ++ + +S L
Sbjct: 62 SISILIILAIMLTREIQTGNLSNRLRAPALFTGAGVTLVLILTSVGT------DWNVSTL 115
Query: 125 VFKGNNVENIGKVLYT--QYAYPLEISGFILLLSMIGAIVLMLRHRR 169
N + ++L++ + + ++ +LL ++IGAI+L+ +
Sbjct: 116 KPAENTTALLAELLFSTDSFMMAVAMAAILLLTAIIGAIILVRSDDK 162
>gi|294630838|ref|ZP_06709398.1| NADH dehydrogenase subunit [Streptomyces sp. e14]
gi|292834171|gb|EFF92520.1| NADH dehydrogenase subunit [Streptomyces sp. e14]
Length = 142
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 53/126 (42%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++ + VT + +++ L+ A +LLL AEF+A + +++YVG
Sbjct: 17 EIAFLLVGLATFGAALVTVTTKQLVHAALWLVVTLGGLAVEYLLLTAEFIAWVQVLIYVG 76
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V+V LF +M+ I + + + ++AA +V + +L
Sbjct: 77 SVVVLLLFGLMLTKAPIGRSPDADSPNRWAALAVAVVAAAALVWVVADAFRTTWIDLDGT 136
Query: 125 VFKGNN 130
Sbjct: 137 AAGTTR 142
>gi|27464550|gb|AAO16126.1| NADH dehydrogenase subunit 6 [Alcyonium sp. CSM-A]
Length = 147
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ + + L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKADSQDHSHFLPVGLSVIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
L+ + ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI
Sbjct: 61 FYSLLTNSPKYI-------NNPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAI 113
Query: 162 VLMLRHRRD----------IKRQDISKQLESN 183
+L + RQD+ Q+
Sbjct: 114 LLAKQPNSPFLYNSHGESLRSRQDLFLQISRE 145
>gi|114177223|gb|ABI53775.1| NADH dehydrogenase subunit 6 [Placozoan sp. BZ49]
Length = 278
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 4 QSLFFYLFSFMAIISSFLVVT---------------VRNPIYSVFSLIFAFVNAAGLFLL 48
+ + F + S + + ++ + + N + SVF LI F+ ++GLF++
Sbjct: 8 EDILFIILSSVTVTAAIMTIRGALVSPASSAVTPTYSYNFLASVFWLILTFIGSSGLFIV 67
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGF 92
LG EF+ +I L+VYVGA+ + FLF+IMM+ + + K F
Sbjct: 68 LGMEFLGLIFLIVYVGAICIIFLFVIMMIPGGDQKDKETKGYSF 111
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
AA L + N ++ + + G N+E IG VLY Y Y + FILL++MIGAI
Sbjct: 211 AAALNLAQQNPLLGPNDSFFTLNGSGGTNLEAIGSVLYINYYYAFILVSFILLVAMIGAI 270
Query: 162 VLML 165
VL
Sbjct: 271 VLGR 274
>gi|261187255|ref|XP_002620077.1| NADH dehydrogenase subunit 6 [Ajellomyces dermatitidis SLH14081]
gi|239586520|gb|EEQ69163.1| NADH dehydrogenase subunit 6 [Ajellomyces dermatitidis SLH14081]
gi|239606194|gb|EEQ83181.1| NADH dehydrogenase subunit 6 [Ajellomyces dermatitidis ER-3]
Length = 202
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 24/184 (13%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + I+ S + +NP+ S+F LI F++ + +G EF+ + L+VYVGAV +
Sbjct: 19 IIYIICILFSLYTIISKNPVVSIFFLIGLFLSISCYLFFIGLEFIGLSYLLVYVGAVSIL 78
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAEL------------------------ 105
FLFI+M+++I I + IL +
Sbjct: 79 FLFILMLINIRISELLSDTYNYLPLAMLSVILFIYILGQNIPNNISELGYNKFENLKQEY 138
Query: 106 IVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+++ + + +IG +LYT Y+ L I ILLL+M+G IV+ L
Sbjct: 139 FFNYKEDILYVISLNWDTSLVNNTQISSIGNILYTNYSIWLLILSIILLLAMVGTIVITL 198
Query: 166 RHRR 169
+
Sbjct: 199 NKNK 202
>gi|283850898|ref|ZP_06368184.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
sp. FW1012B]
gi|283573821|gb|EFC21795.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Desulfovibrio
sp. FW1012B]
Length = 172
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 5/150 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M FYL + + + ++ L T RNP+++V + F+ AAG+F++LGA ++ +V
Sbjct: 1 MTALGALFYLLAAVLLGAAVLTATRRNPMHAVCCAVITFLAAAGMFVVLGAPLPGVLEVV 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA++V FLFIIM+L + R G + + A + A ++ +
Sbjct: 61 VYAGAIMVLFLFIIMLLGLSAGTGPVR-----AGRLVVPGVLAAASLVALFALIGADPAG 115
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISG 150
+ L + +G VL+ Y +E+
Sbjct: 116 RTMLPAAIASPAAVGTVLFDAYWLAVEVVS 145
>gi|124004524|ref|ZP_01689369.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Microscilla marina ATCC 23134]
gi|123990096|gb|EAY29610.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Microscilla marina ATCC 23134]
Length = 193
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/192 (20%), Positives = 88/192 (45%), Gaps = 22/192 (11%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F+ F + +S+ +++ R +Y+ FSL+ + + L++ GA+F+A+ +++
Sbjct: 1 MILKIVFFGFVALIGVSTLVLLGTRKVLYAAFSLLLILLGISALYVFAGADFLAVTQIII 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL----------------------GSFFIG 99
YVG ++V LF IM+ + + R F G +
Sbjct: 61 YVGGILVLLLFGIMLTNRPPQNLSIRFSNPFQQDETSDVQPLTKTRNNLAGIVLGLGLLA 120
Query: 100 ILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
IL + M + + ++ V K + V+ +G L TQY E+ +L+++++G
Sbjct: 121 ILVFAIHKANLGQMPWIKQAVQNQQVIKQSTVQGLGIQLMTQYVLVFEVIAVLLMVALLG 180
Query: 160 AIVLMLRHRRDI 171
A+++ R +
Sbjct: 181 AVLIAGRTEKKT 192
>gi|192293096|ref|YP_001993701.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Rhodopseudomonas palustris TIE-1]
gi|192286845|gb|ACF03226.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Rhodopseudomonas palustris TIE-1]
Length = 168
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M SL A+IS+ + VT N ++++ L+ + A F LGA F A++ +++Y
Sbjct: 1 MSSLLAIYAGAFALISAAVSVTRPNAVHALLYLVVTLLALAVCFFALGAAFAAVLLIMIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F++M L I E + L + V VF G +
Sbjct: 61 AGAIVVLFVFVVMTLPISPESITRERALLRRAWP----LPVLMSVLIVAPFVFGEFGLKA 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + +GK+L+ +A +E++ +L+ +IG + R
Sbjct: 117 IGQPAPVSAQEVGKLLFGPWALAVELASLLLMAGLIGVRHIGRNDRS 163
>gi|7524984|ref|NP_050082.1| NADH dehydrogenase subunit 6 [Dictyostelium discoideum]
gi|6093583|sp|Q37314|NU6M_DICDI RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|699594|dbj|BAA03936.1| NADH dehydrogenase subunit 6 [Dictyostelium discoideum]
gi|4958887|dbj|BAA78064.1| NADH dehydrogenase subunit 6 [Dictyostelium discoideum]
Length = 226
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 32/204 (15%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
+ +++ NPIYS+ +LI + A + L + EF+A I ++V VGA+ V FLFI+MM+
Sbjct: 17 CTLVILRSVNPIYSILNLIVIYGCYASILLTVEMEFLACIYILVNVGAIAVLFLFIVMMI 76
Query: 78 DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN-------------------------F 112
+I+I + K+ + I L+
Sbjct: 77 NINIVEIQETMKKYNIYMIVGIIGVVGLLGILITNYQIRIKEEVIADFSMFLINSEVVQL 136
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLM------L 165
+ + L + ++ +G V+Y Y+ ++ ILL+ M+G I +
Sbjct: 137 QATPSYLDFYSLFVETTDIRTMGSNVIYGSYSIWFIMACIILLIGMVGVIYITEDLIIEK 196
Query: 166 RHRRDIKRQDISKQLESNPDNSIV 189
R + +RQDI+ Q+ +I
Sbjct: 197 RTLNERRRQDINSQVLREYKITIR 220
>gi|27464547|gb|AAO16124.1| NADH dehydrogenase subunit 6 [Alcyonium digitatum]
Length = 147
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V + L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
L+ + ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI
Sbjct: 61 FYSLLTNSPKYI-------NNPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAI 113
Query: 162 VLMLRHRRD----------IKRQDISKQLESN 183
+L + RQD+ Q+
Sbjct: 114 LLAKQPNSPFLYNSHGESLRSRQDLFLQISRE 145
>gi|320449681|ref|YP_004201777.1| NADH-quinone oxidoreductase subunit J [Thermus scotoductus SA-01]
gi|320149850|gb|ADW21228.1| NADH-quinone oxidoreductase, subunit J [Thermus scotoductus SA-01]
Length = 179
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 4/137 (2%)
Query: 17 ISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMM 76
+ LVVT++N I++ +LI F+ AGL++ L A F+ I ++VY GA++V FLF+IM+
Sbjct: 14 FTGVLVVTLKNAIHAALALIGNFLVLAGLYVALEARFLGFIQIIVYAGAIVVLFLFVIML 73
Query: 77 LDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGK 136
L + L L++ + + V A + +G + +G
Sbjct: 74 LYAAQGEVGFDPLVRSRPLAALLALGVALVLLSGLWGVNLAFTKD----LQGGLPQALGP 129
Query: 137 VLYTQYAYPLEISGFIL 153
+LY + + L GF+L
Sbjct: 130 LLYGDWLFVLLAVGFLL 146
>gi|27464574|gb|AAO16142.1| NADH dehydrogenase subunit 6 [Klyxum simplex]
Length = 147
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ ++ + L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKIDSQDHSHFLPVGLSVIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
+ L+ + ++ + ++ N+ IG LYT Y + I+ +LL +MIGAI
Sbjct: 61 FSSLLTNSPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLAAMIGAI 113
Query: 162 VLMLRHRRD----------IKRQDISKQLESN 183
+L + RQD+ Q+
Sbjct: 114 LLAKQPNSPFLYNSHGESLRSRQDLFLQISRE 145
>gi|305432366|ref|ZP_07401528.1| NADH-quinone oxidoreductase subunit J [Campylobacter coli JV20]
gi|304444405|gb|EFM37056.1| NADH-quinone oxidoreductase subunit J [Campylobacter coli JV20]
Length = 171
Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 73/171 (42%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ L F FS + + + V N +YS+ +L V +G + LL AEF+ +I ++V
Sbjct: 1 MIEILAFTFFSVVVLGFFLVAVLSTNMLYSLSALAGGMVFLSGFYFLLDAEFLGVIQIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y GAV+ + F +M D E E + + I L + A
Sbjct: 61 YSGAVLGLYSFAMMFFDSSKEFKEKLRAKKSFFLLVILSAVLLLFMLLGFKHQNIAGDLA 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + + ++++Y E +LL+++I AIVL + +
Sbjct: 121 LSDPNLFDYNKQLAFAIFSKYLLAFEFIAILLLIALICAIVLTHKELTKER 171
>gi|225554147|gb|EEH02512.1| NADH dehydrogenase subunit 6 [Ajellomyces capsulatus G186AR]
Length = 202
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 24/184 (13%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + I S + +NP+ S+F LI F++ + +G EF+ + L+VYVGAV +
Sbjct: 19 IIYIICIFFSLYTIISKNPVVSIFFLIGLFLSISCYLFFIGLEFIGLSYLLVYVGAVSIL 78
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAEL------------------------ 105
F+FI+M+++I I + IL +
Sbjct: 79 FIFILMLINIRISELLSETYNYIPLAMLSVILFIYILGQNIPNNISVLGYNKFENLKQEY 138
Query: 106 IVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + +IG VLYT Y+ L I ILLL+M+G IV+ L
Sbjct: 139 FFNYKEDIQYVISLNWDNSLVNNTQISSIGNVLYTNYSIWLLIISIILLLAMVGTIVITL 198
Query: 166 RHRR 169
+
Sbjct: 199 NKNK 202
>gi|240272796|gb|EER36347.1| NADH-ubiquinone oxidoreductase chain 6 [Ajellomyces capsulatus
H143]
gi|325087325|gb|EGC40635.1| NADH-ubiquinone oxidoreductase chain 6 [Ajellomyces capsulatus H88]
Length = 202
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 24/184 (13%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + I S + +NP+ S+F LI F++ + +G EF+ + L+VYVGAV +
Sbjct: 19 IIYIICIFFSLYTIISKNPVVSIFFLIGLFLSISCYLFFIGLEFIGLSYLLVYVGAVSIL 78
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAEL------------------------ 105
F+FI+M+++I I + IL +
Sbjct: 79 FIFILMLINIRISELLSETYNYIPLAMLSVILFIYILGQNIPNNISVLGYNKFENLKQEY 138
Query: 106 IVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + + +IG VLYT Y+ L I ILLL+M+G IV+ L
Sbjct: 139 FFNYKENIQYVISLNWDNSLVNNTQISSIGNVLYTNYSIWLLIISIILLLAMVGTIVITL 198
Query: 166 RHRR 169
+
Sbjct: 199 NKNK 202
>gi|27464577|gb|AAO16144.1| NADH dehydrogenase subunit 6 [Cladiella sp. CSM-2002]
Length = 147
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ ++A I L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKIASQDHSHFLPVGLSIIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
+ L+ + ++ + ++ N+ IG LYT Y + I+ +LL +MIGAI
Sbjct: 61 FSSLLTNSPKYIS-------NPVIGSKTNIGAIGSHLYTTYYELVLIASLVLLAAMIGAI 113
Query: 162 VLMLRHRRD----------IKRQDISKQLESN 183
+L + RQD+ Q+
Sbjct: 114 LLAKQPNSPFLYNSHGESLRSRQDLFLQISRE 145
>gi|27464568|gb|AAO16138.1| NADH dehydrogenase subunit 6 [Alcyonium rudyi]
gi|27464571|gb|AAO16140.1| NADH dehydrogenase subunit 6 [Alcyonium sp. CSM-B]
gi|27464583|gb|AAO16148.1| NADH dehydrogenase subunit 6 [Sarcophyton trocheliophorum]
Length = 147
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V + L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
L+ + ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI
Sbjct: 61 FYSLLTNSPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAI 113
Query: 162 VLMLRHRRD----------IKRQDISKQLESN 183
+L + RQD+ Q+
Sbjct: 114 LLAKQPNSPFLYNSHGESLRSRQDLFLQISRE 145
>gi|295697427|ref|YP_003590665.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacillus
tusciae DSM 2912]
gi|295413029|gb|ADG07521.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Bacillus
tusciae DSM 2912]
Length = 172
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 80/171 (46%), Gaps = 3/171 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F+L + +AI +FL+ + ++ V S+ +F++ AGLF +LGAEF+ + L+
Sbjct: 1 MAQNVITFFLLAGVAIAGAFLMFRSKRIVHMVLSIALSFLSLAGLFAVLGAEFLFVAQLI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY GA+ + +F IM+ + L ++ A G+
Sbjct: 61 VYSGAITILAVFSIMLTRHEPAGPAVGAAGFKRWFRLAVPLGLFALLAWIILDTPIAVGQ 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
L+ ++ N E + +Y E+ G +LL++++GAIV+ +
Sbjct: 121 LTEVIGPMNMAEALFAP---RYLLSFELLGVLLLVALVGAIVMAKEEMEKV 168
>gi|108802981|ref|YP_642918.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 [Rubrobacter
xylanophilus DSM 9941]
gi|108764224|gb|ABG03106.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Rubrobacter
xylanophilus DSM 9941]
Length = 168
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 67/170 (39%), Gaps = 3/170 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M Q+LF F A+ +V + + S +L+F+ +FL + AEF+ ++ ++
Sbjct: 1 MSAQALFTGFFGVAAVWFGVVVFRTSSMVRSALALLFSQAAIGAMFLAMQAEFLGVLQVM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+ + + +F++M + + E S A + A+ + G
Sbjct: 61 MMATEMSIMAIFMVMYMMDPGGLGEMEMTHQKRASIAA---GALAALAAAGVAALTDWGP 117
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ E +G + + E +G +L +MI A + + RR
Sbjct: 118 AAAAPPAAEQTERLGAEMLGRSMLIFETAGVTILTAMIAATAVAIERRRR 167
>gi|27464586|gb|AAO16150.1| NADH dehydrogenase subunit 6 [Lobophytum pauciflorum]
Length = 147
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V + L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
L+ + ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI
Sbjct: 61 FYSLLTNSPKYIS-------NPVIGSKTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAI 113
Query: 162 VLMLRHRRD----------IKRQDISKQLESN 183
+L + RQD+ Q+
Sbjct: 114 LLAKQPNSPFLYNFHGESLRSRQDLFLQISRE 145
>gi|329889073|ref|ZP_08267416.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Brevundimonas diminuta ATCC 11568]
gi|328844374|gb|EGF93938.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein
[Brevundimonas diminuta ATCC 11568]
Length = 171
Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 70/173 (40%), Gaps = 2/173 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q +F F A+ +V + + S +L+F+ +FL++ AEF+ ++ ++
Sbjct: 1 MTVQMIFLAFFGAAAVWFGVVVFRTHSMVRSALALLFSQTAIGAMFLVMQAEFLGVLQIM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+ + V +F++M + + + S + L+ +
Sbjct: 61 MMATEMSVMAIFMVMFMMDPGGMGKMDMTHQKRLSLW--AGGIGLLAALLLVWLPDWGPV 118
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ ++G+ L + + + +G +L +MI A ++ + + ++
Sbjct: 119 ALSVPGAHEQAADLGRELLGRSMFIFQSAGLTILTAMIAATMVAIVPNAEQRK 171
>gi|289582896|ref|YP_003481362.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Natrialba
magadii ATCC 43099]
gi|289532449|gb|ADD06800.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Natrialba
magadii ATCC 43099]
Length = 96
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 47/85 (55%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F LF+F+ + S VV + +P +S L A ++ A F++ AEFVAM+ ++
Sbjct: 1 MTYELIAFTLFAFITLASGLGVVLLEDPWHSALMLGVALMSIAVHFVMQAAEFVAMMQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAE 85
VYVG V++ F +M+ E
Sbjct: 61 VYVGGVLILITFAVMLTQHKGATDE 85
>gi|319760608|ref|YP_004124546.1| NADH-quinone oxidoreductase subunit J [Candidatus Blochmannia vafer
str. BVAF]
gi|318039322|gb|ADV33872.1| NADH-quinone oxidoreductase subunit J [Candidatus Blochmannia vafer
str. BVAF]
Length = 189
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + FY+ ++I+++ V+ N ++S+ L+ + ++ + L A FV I ++VY
Sbjct: 1 MMVVLFYISGCVSILATICVIFNNNTVHSLLYLVLSLLSVSLNLFSLKASFVGAIEVIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDI----EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
GA++V FLF+IMMLDID + + L ++ + + +
Sbjct: 61 AGAIMVLFLFVIMMLDIDSVTINFDNKTGESFLLKKFNLGVSLFMSSLLFVLLYSIGRID 120
Query: 119 GELSRLVFKGNNVENIGKVLY---TQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ +V+ IG L+ +Y +EI+ +LL ++I + + +
Sbjct: 121 NCFINIKNGAISVKQIGITLFGGNGEYILVVEIASLLLLGALISVLHIAQESKT 174
>gi|27464580|gb|AAO16146.1| NADH dehydrogenase subunit 6 [Sinularia gaweli]
Length = 147
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 42 AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGIL 101
AA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V + L
Sbjct: 1 AAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFL 60
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
L+ + ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI
Sbjct: 61 FYSLLTNSPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAI 113
Query: 162 VLMLRHRRD----------IKRQDISKQLESN 183
+L + +QD+ Q+
Sbjct: 114 LLAKQPNSPFLYNSHGESLRSKQDLFLQISRE 145
>gi|24080118|ref|NP_705909.1| NADH dehydrogenase subunit 6 [Cryptococcus neoformans var. grubii]
gi|22536162|gb|AAN01231.1| NADH dehydrogenase subunit 6 [Cryptococcus neoformans var.
neoformans]
gi|23630297|gb|AAN37587.1| NADH dehydrogenase subunit 6 [Cryptococcus neoformans var. grubii]
Length = 202
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 58/111 (52%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + L +F A++S LV+T NP+ SV LI FVNAAG +LLG FV + L+VY
Sbjct: 1 MNTFLLDLLAFGAVLSGVLVITSVNPVISVLFLISVFVNAAGYLVLLGVGFVGISYLIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM 113
VGA+ + FLF++MML+I I + ++ + +
Sbjct: 61 VGAIAILFLFVVMMLNISITEIVSVGREYTKNLPLGFVVGTVFFFEILSVI 111
>gi|321271265|gb|ADW79436.1| NADH dehydrogenase subunit 6 [Glomerella lindemuthiana]
Length = 231
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S AI+ + L + +NPI SV LI F + + +LLG F+ + L+VY+GAV +
Sbjct: 22 IVSVFAILCAILTIVSKNPIVSVLFLIGLFGSVSSYLILLGLNFIGLSYLIVYIGAVSIL 81
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
FLFI+M+++I + + K + FI IL L+ + +
Sbjct: 82 FLFILMLINIRVSELQSNTKNSIPLALFITILFNYLVFQFLPYDLAILNNSN 133
>gi|114177239|gb|ABI53790.1| NADH dehydrogenase subunit 6 [Placozoan sp. BZ2423]
Length = 301
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 15/90 (16%)
Query: 4 QSLFFYLFSFMAIISSFLVVTV---------------RNPIYSVFSLIFAFVNAAGLFLL 48
+ + F S + +I++ + ++ N + SVF LI AF+ ++GLF++
Sbjct: 8 EDVLFATLSSITVIAAIMTISSGATPKKSSAVTPIYSHNFLASVFWLILAFIGSSGLFIV 67
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
LG EF+ +I L+VYVGA+ + FLF+IMM+
Sbjct: 68 LGMEFLGLIFLIVYVGAICIIFLFVIMMIP 97
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ + +N+E IG VLY Y Y + FILL++MIGAIVL L+
Sbjct: 246 YNDSFFAPSAPGCSNLEAIGAVLYINYYYAFILVSFILLVAMIGAIVLGLQSSDRN 301
>gi|320105158|ref|YP_004180749.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Isosphaera
pallida ATCC 43644]
gi|319752440|gb|ADV64200.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Isosphaera
pallida ATCC 43644]
Length = 325
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 46/222 (20%), Positives = 85/222 (38%), Gaps = 53/222 (23%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ ++F +FS A+ ++ ++ R+P++S ++ AGLFLL GA+F+A T++V
Sbjct: 65 LISAVFHTVFSLSAVAAAAAMIASRDPVHSALWFAVTVLSTAGLFLLAGAQFLAAGTVIV 124
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV-------------- 107
Y GA+IV FLF+IM+ R R + F L ++
Sbjct: 125 YAGAIIVMFLFVIMLAQQQGRATYDRMSRNPKAAVFGVSLLLWTLLYAILAARSAPPLGP 184
Query: 108 ---------------------------------------CASNFMVFSAEGELSRLVFKG 128
A V L
Sbjct: 185 SPEATAPLEARSAAVARGAAGSSDPADRIAQAALAPTARLAPTISVEQMLATLPAQANPP 244
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+V +G LY+ + + ++ +L +SM+GA+ ++ +R
Sbjct: 245 PHVAALGGTLYSDHVVSVLVAAALLFVSMVGAVAIIALPQRG 286
>gi|218295769|ref|ZP_03496565.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermus
aquaticus Y51MC23]
gi|218243928|gb|EED10455.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermus
aquaticus Y51MC23]
Length = 177
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
RN I++ +LI F+ AG+++ L A F+ I ++VY GA++V FLF+IM+L A+
Sbjct: 23 RNAIHAALALILNFLVLAGVYVALDARFLGFIQIIVYAGAIVVLFLFVIMLL----FAAQ 78
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYP 145
L L V A +G + +G +LY + +
Sbjct: 79 GEIGFDPLVRARPLAALLALGVAALLLSGLWGLKLTLGKDLQGGLPQALGPLLYGDWLFV 138
Query: 146 LEISGFIL 153
L GF+L
Sbjct: 139 LLAVGFLL 146
>gi|46446202|ref|YP_007567.1| putative NADH-ubiquinone oxidoreductase chain J [Candidatus
Protochlamydia amoebophila UWE25]
gi|46399843|emb|CAF23292.1| putative NADH-ubiquinone oxidoreductase chain J [Candidatus
Protochlamydia amoebophila UWE25]
Length = 170
Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 76/160 (47%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++F + +ISSF ++ PI + + A ++ A L++ L A+F+A + +++Y GA++V
Sbjct: 11 WIFGILLLISSFGILLTSKPIQASLCFLLALLSLAALYVELSAQFIAAMQVLIYAGAILV 70
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F+F+I++ + + I A L ++ + L
Sbjct: 71 IFMFVIVLFQDAHNQIHQFVAQSKSSISILAIAAFLLAFGFLSYYLSELSTSTKSLPEGF 130
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
++G +LY + +P E I L++++GA+ + + R
Sbjct: 131 GTAHSLGYLLYVNFFFPFEAVILIFLIAVVGALYIGRKER 170
>gi|289474440|gb|ADC97831.1| NADH dehydrogenase subunit 6 [Corallium kishinouyei]
Length = 154
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK---------RQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPSLYDPHVETRSRQDLFLQISRK 152
>gi|83956301|ref|ZP_00964742.1| hypothetical protein NAS141_01696 [Sulfitobacter sp. NAS-14.1]
gi|83839522|gb|EAP78703.1| hypothetical protein NAS141_01696 [Sulfitobacter sp. NAS-14.1]
Length = 171
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 69/173 (39%), Gaps = 2/173 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +Q +F F A+ +V + + S +L+F+ +FL++ AEF+ ++ ++
Sbjct: 1 MTVQMIFLAFFGAAAVWFGVVVFRTHSMVRSALALLFSQTAIGAMFLVMQAEFLGVLQIM 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+ + V +F++M + + + S + L+ +
Sbjct: 61 MMATEMSVMAIFMVMFMMDPGGMGKMDMTHQKRLSLW--AGGIGLLAALLLVWLPDWGPV 118
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ ++G+ L + + +G +L +M+ A ++ + + ++
Sbjct: 119 ALSVSGAHEQAADLGRELLGRSMLIFQSAGLTILTAMVAATMVAIVPNAEQRK 171
>gi|218176294|ref|YP_002364551.1| NADH-plastoquinone oxidoreductase subunit 6 [Festuca arundinacea]
gi|215882378|gb|ACJ70808.1| NADH-plastoquinone oxidoreductase subunit 6 [Festuca arundinacea]
Length = 160
Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDI---DIE 82
NPIYS FSL V + + LL + FVA+ L++YVGA+ V +F +M ++ +
Sbjct: 30 TNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSECSKD 89
Query: 83 VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLY 139
GF I I+ + + S + + NNV+ +G L
Sbjct: 90 KNYWTIGDGFTSIVCITIVFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQMGIHLA 149
Query: 140 TQYAYPLEISG 150
T + P E
Sbjct: 150 TDFYLPFEFIS 160
>gi|110578641|ref|YP_667830.1| NADH dehydrogenase subunit 6 [Verticillium dahliae]
gi|84682168|gb|ABC60427.1| NADH dehydrogenase subunit 6 [Verticillium dahliae]
Length = 222
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S I+ L++ +NPI SV LI F A +LLG F+ L+VY+GAV +
Sbjct: 22 IVSLFIILCGVLIIISKNPIVSVLFLIGLFGGVASYLILLGLNFIGFSYLIVYIGAVSIL 81
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS------------------- 110
FLFI+M+++I I + K + FI I +
Sbjct: 82 FLFILMLINIRISELQSNTKNSIPLALFITIFFNYSLFQVLPYDLAILNNNNNYINNILY 141
Query: 111 -------------------NFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGF 151
N + F+ + + +++ +IG +LYT L +
Sbjct: 142 YISLNKQETINDSKLLNTDNDLYFATSNSWDGNLIETSHISSIGNILYTTNNMWLILVSL 201
Query: 152 ILLLSMIGAIVLMLRHRRDI 171
ILLL+M+GAI++ ++ R+
Sbjct: 202 ILLLAMVGAIIITIKSNRNS 221
>gi|81230387|ref|YP_398774.1| NADH dehydrogenase subunit 6 [Aspergillus tubingensis]
gi|77157975|gb|ABA62003.1| NADH dehydrogenase subunit 6 [Aspergillus tubingensis]
Length = 217
Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 78/196 (39%), Gaps = 37/196 (18%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMI-TLVVYVGAVIV 68
++I+ RNPI +V LI FV+ AG+ +L+G +++ + ++V VGA
Sbjct: 22 FIYIISILFGIFTTISRNPIVAVLFLIGLFVDIAGVLILVGIDYIGLSSYILVNVGAAST 81
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS------ 122
FL I+M++++ I R + L +I + S
Sbjct: 82 LFLLILMLINMRISELVSETNRDTPWAVITVSLFYFIIGQVTPSNFTDNTIVTSSSNSFS 141
Query: 123 ------------------------------RLVFKGNNVENIGKVLYTQYAYPLEISGFI 152
+ + ++ IG ++YT Y+ L IS I
Sbjct: 142 EVYDLQVDNEILNIVDLQQETASASSKSGDTSLVELPHLGGIGNIMYTNYSLWLIISSVI 201
Query: 153 LLLSMIGAIVLMLRHR 168
LL+ M+GAIV+ ++ +
Sbjct: 202 LLVGMVGAIVITIKQK 217
>gi|55980062|ref|YP_143359.1| NADH-quinone oxidoreductase subunit 10 [Thermus thermophilus HB8]
gi|2499299|sp|Q56225|NQO10_THET8 RecName: Full=NADH-quinone oxidoreductase subunit 10; AltName:
Full=NADH dehydrogenase I chain 10; AltName: Full=NDH-1
subunit 10
gi|1279870|gb|AAA97947.1| NADH dehydrogenase I, subunit NQO10 [Thermus thermophilus]
gi|55771475|dbj|BAD69916.1| NADH-quinone oxidoreductase chain 10 [Thermus thermophilus HB8]
Length = 176
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
RN I++ +LI F+ AG+++ L A F+ I ++VY GA++V FLF+IM+L
Sbjct: 23 RNAIHAALALILNFLVLAGVYVALDARFLGFIQVIVYAGAIVVLFLFVIMLLFAAQGEIG 82
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYP 145
+ L I+ A + + A + KG + +G +LY + +
Sbjct: 83 FDPLVRSRPLAALLALGVAGILAAGLWGLDLAFTQD----LKGGLPQALGPLLYGDWLFV 138
Query: 146 LEISGFILLLSMIGAIVL-----MLRHRRDIKRQDISK 178
L GF+L+ + + A+ L R + KR+++++
Sbjct: 139 LLAVGFLLMAATVVAVALVEPGKASRAKEAEKREEVAR 176
>gi|289474449|gb|ADC97837.1| NADH dehydrogenase subunit 6 [Corallium secundum]
Length = 154
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYIS-------NPVIGSRTNIGAIGTHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK---------RQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPSLYDSHVETRSRQDLFLQISRK 152
>gi|302423955|ref|XP_003009807.1| NADH dehydrogenase subunit 6 [Verticillium albo-atrum VaMs.102]
gi|261361697|gb|EEY24125.1| NADH dehydrogenase subunit 6 [Verticillium albo-atrum VaMs.102]
Length = 222
Score = 61.6 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 38/200 (19%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S I+ L++ +NPI SV LI F A +LLG F+ L+VY+GAV +
Sbjct: 22 IVSLFIILCGVLIIISKNPIVSVLFLIGLFGGVASYLILLGLNFIGFSYLIVYIGAVSIL 81
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS------------------- 110
FLFI+M+++I I + K + FI I +
Sbjct: 82 FLFILMLINIRISELQSNTKNSIPLALFITIFFNYSLFQVLPYDLAILNNNNNYINNILY 141
Query: 111 -------------------NFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGF 151
N + F+ + + +++ +IG +LYT L +
Sbjct: 142 YISLNKQETINDSKLLNTNNDLYFATSNSWDGNLIETSHISSIGNILYTTNNMWLILVSL 201
Query: 152 ILLLSMIGAIVLMLRHRRDI 171
ILLL+M+GAI++ ++ R+
Sbjct: 202 ILLLAMVGAIIITIKSNRNS 221
>gi|289474446|gb|ADC97835.1| NADH dehydrogenase subunit 6 [Corallium sp. USNM 1075800]
Length = 154
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYIS-------NPVIGSKTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK---------RQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPSLYDSHVEIRSRQDLFLQISRK 152
>gi|87043016|ref|YP_492630.1| NADH dehydrogenase subunit 6 [Dictyostelium citrinum]
gi|122000117|sp|Q2LCR2|NU6M_DICCI RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|84682116|gb|ABC60381.1| NADH dehydrogenase subunit 6 [Dictyostelium citrinum]
Length = 226
Score = 61.2 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
+F+++ NPIYS+ +LI + A + L + EF+A I ++V VGA+ V FLFI+MM+
Sbjct: 17 CTFVILRSVNPIYSILNLIVIYGCYASILLTVEMEFLACIYILVNVGAIAVLFLFIVMMI 76
Query: 78 DIDIEVAEPRKKRGFLGSFFIGILAAELIVC-------------------------ASNF 112
+I+I + K+ + F I ++ +
Sbjct: 77 NINIVEIQETMKKYNIYMFVGFIGLIGIMGILITNYQIRIKEEVIADFSMFLLNTEITTL 136
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLM------L 165
+ + L + ++ +G V+Y + ++ ILL+ M+G I +
Sbjct: 137 QATPSYLDFYELFVETTDLRAMGSNVIYGSQSIWFIMACIILLIGMVGVIYITEDLIIEK 196
Query: 166 RHRRDIKRQDISKQLESNPDNSIV 189
R +RQDI+ Q+ +I
Sbjct: 197 RKLNARRRQDINSQVLREYKITIK 220
>gi|289474443|gb|ADC97833.1| NADH dehydrogenase subunit 6 [Corallium laauense]
Length = 154
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ S ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYIS-------SPVIGSKTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK---------RQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPSLYDSHVEIRSRQDLFLQISRK 152
>gi|11467591|ref|NP_043737.1| NADH dehydrogenase, subunit 6 [Allomyces macrogynus]
gi|1236421|gb|AAC49238.1| NADH dehydrogenase, subunit 6 [Allomyces macrogynus]
Length = 204
Score = 61.2 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTV-RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITL 59
M + FYL S + IIS L + + +NPI SV L+F FVN A +F+L+G + I +
Sbjct: 1 MTITWGLFYLLSGLGIISGVLTIIMGKNPINSVVYLVFCFVNCAAVFILMGISLLGFIYI 60
Query: 60 VVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+VYVGA+ + F+F+IMM+D+ F A +I + +V
Sbjct: 61 IVYVGAIAILFIFVIMMMDLRNLTESNLMSGHKTFFSFYNYPLALIIAITTLLLVMKDNS 120
Query: 120 ELSRLVFKGN 129
++F N
Sbjct: 121 HAVSVLFDTN 130
>gi|116747654|ref|YP_844341.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Syntrophobacter fumaroxidans MPOB]
gi|116696718|gb|ABK15906.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Syntrophobacter fumaroxidans MPOB]
Length = 175
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
F++ + + + V RN +++V LI A GL+L LG+ F+ ++ L++YVGA+
Sbjct: 15 FWIVVGLTLAGASFAVFPRNILHNVLGLILALSGIGGLYLSLGSFFMGLMQLLIYVGAIC 74
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V +F IM+ + + + + + + A +V +
Sbjct: 75 VAIVFAIML----SRPLHLEVPKREAPKVAMAVATSVVFLVAMVGVVLRTNWVPAVERGT 130
Query: 128 GNNVENIGKVLYTQYAYPLEI 148
+VE IG +L T+YA E+
Sbjct: 131 DWSVEAIGDLLLTRYALVFEV 151
>gi|289474488|gb|ADC97863.1| NADH dehydrogenase subunit 6 [Sibogagorgia dennisgordoni]
Length = 153
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK--------RQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPSLYSHVEIRSRQDLFLQISRK 151
>gi|289474458|gb|ADC97843.1| NADH dehydrogenase subunit 6 [Paracorallium sp. USNM 1089600]
Length = 154
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVYYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK---------RQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPSLYDSHVEIRSRQDLFLQISRK 152
>gi|289474467|gb|ADC97849.1| NADH dehydrogenase subunit 6 [Sibogagorgia cauliflora]
Length = 154
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKADYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYIS-------DPVIGYRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK---------RQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPSLYESHVEIRSRQDLFLQISRK 152
>gi|107735872|ref|YP_626459.1| NADH dehydrogenase subunit 6 [Metarhizium anisopliae]
gi|57904574|gb|AAW58829.1| NADH dehydrogenase subunit 6 [Metarhizium anisopliae]
Length = 225
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 41/201 (20%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++ V+ +NPI S+ SLI F + + +L G F+ L+VY+GAV +
Sbjct: 22 IISVIALLFGIAVIVNKNPIASLLSLIGLFGSISVYLILSGLTFIGFSYLIVYIGAVSIL 81
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF----------------- 112
FLFI+M+L+I + + FI IL + +
Sbjct: 82 FLFILMLLNIRTSELQSNNVNSIPLALFITILFNYALFQLLPYYMAILNSYNSKLSNILY 141
Query: 113 ------------------------MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEI 148
++F + + +++ IG +LYT Y L +
Sbjct: 142 YLPTSKYSDIIMNTNSNLDIDTHNIMFVTSNSWDGTITETSHISTIGNILYTSYNMWLFL 201
Query: 149 SGFILLLSMIGAIVLMLRHRR 169
ILL+ M+GAI++ ++
Sbjct: 202 VSIILLVVMVGAIIITIKQET 222
>gi|289474482|gb|ADC97859.1| NADH dehydrogenase subunit 6 [Paragorgia wahine]
Length = 154
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKADYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYI-------GNPVIGFRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRR---------DIKRQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPPLYHPHVGTHSRQDLFLQISRK 152
>gi|289474464|gb|ADC97847.1| NADH dehydrogenase subunit 6 [Sibogagorgia cauliflora]
gi|289474470|gb|ADC97851.1| NADH dehydrogenase subunit 6 [Sibogagorgia cauliflora]
gi|289474491|gb|ADC97865.1| NADH dehydrogenase subunit 6 [Sibogagorgia cauliflora]
Length = 154
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYIS-------DPVIGYRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK---------RQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPSLYDSHVEIRSRQDLFLQISRK 152
>gi|189220226|ref|YP_001940866.1| NADH dehydrogenase subunit J [Methylacidiphilum infernorum V4]
gi|189187084|gb|ACD84269.1| NADH dehydrogenase subunit J [Methylacidiphilum infernorum V4]
Length = 135
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 33 FSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGF 92
+L+ ++ AGLF+LLGA F+A + ++VY GAV+V FLFIIM+LD+ E R
Sbjct: 1 MNLVLMILSIAGLFVLLGAYFLAAVQVLVYAGAVMVLFLFIIMLLDLKA--EEQATMRPL 58
Query: 93 LGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFI 152
++ + + + + ++ +G++L+ Y+ E+ G +
Sbjct: 59 GMLGGFLLVLLFGVGFSLAVKAMDSSLSKEQKALGVGGIKALGELLFANYSLAFEVVGLL 118
Query: 153 LLLSMIGAIVLMLR 166
LL+SM+G I+L +
Sbjct: 119 LLISMVGVIILSKK 132
>gi|289474476|gb|ADC97855.1| NADH dehydrogenase subunit 6 [Paragorgia arborea]
Length = 154
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYI-------GNPVIGFRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK---------RQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPSLYNPHVGTHSRQDLFLQISRK 152
>gi|289474461|gb|ADC97845.1| NADH dehydrogenase subunit 6 [Paragorgia regalis]
gi|289474485|gb|ADC97861.1| NADH dehydrogenase subunit 6 [Paragorgia yutlinux]
Length = 154
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYI-------GNPVIGFRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRR---------DIKRQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPPLYNPHVGTHSRQDLFLQISRK 152
>gi|289474455|gb|ADC97841.1| NADH dehydrogenase subunit 6 [Paragorgia aotearoa]
Length = 154
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYI-------GNPVIGFRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRR---------DIKRQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPPLYHPHVGTHSRQDLFLQISRK 152
>gi|84494888|ref|ZP_00994007.1| hypothetical protein JNB_08819 [Janibacter sp. HTCC2649]
gi|84384381|gb|EAQ00261.1| hypothetical protein JNB_08819 [Janibacter sp. HTCC2649]
Length = 172
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M L F +A+++ L VT R +++ L+ A + AG L+LG E VA++ ++
Sbjct: 1 MTSLDLAFAACGLLAVVAGLLAVTTRQVVHAALWLVVALLGVAGSLLVLGHELVALVLVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGAV+V LF +M+ I + AA + + + +
Sbjct: 61 VYVGAVVVLVLFALMLTRAPIGPDLAHDVPVWRRVAAGVAGAATTALLLAALLPLAGGAV 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLE 147
R + + + L+ + +P E
Sbjct: 121 ERREISN----QAVATELFGTWVWPFE 143
>gi|289474473|gb|ADC97853.1| NADH dehydrogenase subunit 6 [Paragorgia arborea]
Length = 154
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYI-------GNPVIGFRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK---------RQDISKQLESN 183
L++M+GAI+L + RQD+ Q+
Sbjct: 114 LVAMVGAILLAKQPNTPSLYNPHVGIHSRQDLFLQISRK 152
>gi|292385595|gb|ADE22119.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
gi|292385599|gb|ADE22122.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
gi|292385603|gb|ADE22125.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 53/108 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIAILGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y GA+ V LF++MMLD+ K+ I + LI
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFGFFLIAVI 108
>gi|292385544|gb|ADE22081.1| NADH dehydrogenase subunit 6 [Lessonia brevifolia]
Length = 311
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKHFLYLGILLFVFFLIAVIYS 110
>gi|292385591|gb|ADE22116.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVCFLIAVIYS 110
>gi|292385587|gb|ADE22113.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVCFLIAVIYS 110
>gi|292385572|gb|ADE22102.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
gi|292385583|gb|ADE22110.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVCFLIAVIYS 110
>gi|292385579|gb|ADE22107.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVCFLIAVIYS 110
>gi|292385576|gb|ADE22105.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 286
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILLFVCFLIAVIYS 110
>gi|289474479|gb|ADC97857.1| NADH dehydrogenase subunit 6 [Paragorgia kaupeka]
Length = 154
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 34 SLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
L+ AFVNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V
Sbjct: 1 WLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNQVDYQDHSHFLP 60
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
+ L L+ + ++ + ++ N+ IG LYT Y + ++ +L
Sbjct: 61 VGLSVIFLFYSLLTNSPKYI-------GNPVIGSRTNIGAIGSHLYTTYYELVLVASLVL 113
Query: 154 LLSMIGAIVLMLRHRRDIK---------RQDISKQLESN 183
L++++GAI+L + RQD+ Q+
Sbjct: 114 LVALVGAILLAKQPNTPSMYKSHIGIRSRQDLFLQISRK 152
>gi|162148246|ref|YP_001602707.1| NADH-quinone oxidoreductase subunit J [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786823|emb|CAP56406.1| putative NADH-quinone oxidoreductase chain J [Gluconacetobacter
diazotrophicus PAl 5]
Length = 168
Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 3/166 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ ++ F L + + ++++F+ VT N ++++ L+ + AG+F LGA F AM+ ++
Sbjct: 1 MMDMNVSFALSALVVVLAAFMTVTRANAVHALLYLVVLLLALAGIFFQLGAPFAAMLEVI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y GA++V F+F++MML++ + + I L ++ +
Sbjct: 61 IYAGAIMVLFVFVVMMLNLGATDQRRERAWIVPRVW---IGPVLLAGVLLAALLRALAVT 117
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+G VLY YA +E++ F+LL + A +
Sbjct: 118 APAGGGGPIGPAQVGLVLYGPYALTVELASFLLLAGLASAFRIGRH 163
>gi|292385457|gb|ADE22016.1| NADH dehydrogenase subunit 6 [Lessonia nigrescens]
Length = 311
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIAILGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + + I +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKATERPWSVKKKRFFYLGILLFFSFSIAVIYS 110
>gi|292385611|gb|ADE22131.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILFFVFFLIAVIYS 110
>gi|218660274|ref|ZP_03516204.1| probable NADH-ubiquinone oxidoreductase protein, chain J [Rhizobium
etli IE4771]
Length = 121
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 48 LLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
+L A F+A+I + VYVGA++V FLF+IMM+D+ V + G L + + ++ ++
Sbjct: 1 MLEAPFLAVIQIFVYVGAIMVLFLFVIMMIDVREAVLQRFLPGGNLLALMLVVVLGLEML 60
Query: 108 CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + G+ + + L+ Y P EI+ ILL +++GAIVL +
Sbjct: 61 VLVLW-SDRFSVIEPVAMRGGDQIRQLSTTLFADYLLPFEIASVILLAALVGAIVLARKE 119
Query: 168 RR 169
+
Sbjct: 120 QE 121
>gi|292385615|gb|ADE22134.1| NADH dehydrogenase subunit 6 [Lessonia variegata]
Length = 311
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIATLGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISFLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I LI +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFLYLGILFFVFFLIAVLYS 110
>gi|116754361|ref|YP_843479.1| NADH dehydrogenase subunit J [Methanosaeta thermophila PT]
gi|116665812|gb|ABK14839.1| NADH dehydrogenase subunit J [Methanosaeta thermophila PT]
Length = 96
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F S + + + L V RN ++S LI +F A L++ L A F+ + ++V
Sbjct: 11 LIELGVFATLSVLILGLAVLTVYSRNIVHSALYLIGSFAGVAALYISLNAPFLGVAQVLV 70
Query: 62 YVGAVIVFFLFIIMMLDIDIE 82
Y+GAV V LF +M+ I
Sbjct: 71 YIGAVGVLILFAVMLTRRTIM 91
>gi|22711916|ref|NP_683855.1| NADH dehydrogenase subunit 6 [Chaetosphaeridium globosum]
gi|75272576|sp|Q8M9T8|NU6C_CHAGL RecName: Full=NAD(P)H-quinone oxidoreductase subunit 6,
chloroplastic; AltName: Full=NAD(P)H dehydrogenase
subunit 6; AltName: Full=NADH-plastoquinone
oxidoreductase subunit 6
gi|22416920|gb|AAM96520.1| subunit 6 of NADH-plastoquinone oxidoreductase [Chaetosphaeridium
globosum]
Length = 179
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 5/168 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ ++ F + + VV N IYS L F++ A L+LLLG+EF+++ +++YVG
Sbjct: 7 QITLFVLDFFIFVGALGVVFFNNIIYSALFLGLTFLSVALLYLLLGSEFLSVAQVIIYVG 66
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRG-----FLGSFFIGILAAELIVCASNFMVFSAEG 119
A+ V +F IM+++ + F +F + +IV ++ +
Sbjct: 67 AINVLIVFAIMLVNKPEFDKKDMIWVPIDLKSFCVNFILFSTIVTMIVTTPWKLLVNNID 126
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + + IG + P E+ +LL+++IGA+++ R
Sbjct: 127 VKLNSLNFLSPIAKIGYQFLSTLVLPFELLSLLLLIALIGAVIIARRE 174
>gi|81238365|gb|ABB60024.1| NADH dehydrogenase subunit 6 [Calyptrophora japonica]
Length = 151
Score = 58.5 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 40 VNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG 99
VNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V +G
Sbjct: 1 VNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHF----LPVG 56
Query: 100 ILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
+ L S ++ N+ IG LYT Y + ++ +LL++M+G
Sbjct: 57 LSVIFLFYSLLTNSPKYISSTHSPVIGSRTNIGAIGSHLYTTYYELVLVASLVLLVAMVG 116
Query: 160 AIVLMLRHRRDIK---------RQDISKQLESN 183
AI+L + RQD+ Q+
Sbjct: 117 AILLAKQPNPPSLYNSHVEIRSRQDLFLQISRK 149
>gi|81238355|gb|ABB60019.1| NADH dehydrogenase subunit 6 [Narella alaskensis]
gi|81238357|gb|ABB60020.1| NADH dehydrogenase subunit 6 [Narella arbuscula]
gi|81238359|gb|ABB60021.1| NADH dehydrogenase subunit 6 [Narella cristata]
gi|81238361|gb|ABB60022.1| NADH dehydrogenase subunit 6 [Narella bayeri]
gi|81238363|gb|ABB60023.1| NADH dehydrogenase subunit 6 [Narella abyssalis]
gi|81238367|gb|ABB60025.1| NADH dehydrogenase subunit 6 [Primnoa pacifica var. willeyi]
Length = 151
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Query: 40 VNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG 99
VNAA +F+ LG +++ +I ++VYVGA+ + FLF+IM++ +V +G
Sbjct: 1 VNAAVMFISLGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHF----LPVG 56
Query: 100 ILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIG 159
+ L S ++ N+ IG LYT Y + ++ +LL++M+G
Sbjct: 57 LSVIFLFYSLLTNSPKYISSTHSPVIGSRTNIGAIGSHLYTTYYELVLVASLVLLVAMVG 116
Query: 160 AIVLMLRHRRDIK---------RQDISKQLESN 183
AI+L + RQD+ Q+
Sbjct: 117 AILLAKQPNTPSLYNSHVEIRSRQDLFLQISRK 149
>gi|156959936|gb|ABU98425.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
Length = 140
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
LG +++ +I ++VYVGA+ + FLF+IM++ +V + L L+
Sbjct: 1 LGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTN 60
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+S ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI+L +
Sbjct: 61 SSKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPS 113
Query: 169 RD----------IKRQDISKQLESN 183
+QD+ Q+
Sbjct: 114 SPFLYNSHGESLRSKQDLFLQISRE 138
>gi|330339456|ref|YP_004376365.1| NADH dehydrogenase subunit 6 [Moniliophthora roreri]
gi|308912823|gb|ADO51570.1| NADH dehydrogenase subunit 6 [Moniliophthora roreri]
Length = 207
Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 59/117 (50%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M +L + +F ++S +T +NP+ SV LI FV +AG +L+G F+ + ++VY
Sbjct: 1 MTTLLINILAFATLLSGIFSITSKNPVISVLFLIGTFVLSAGYLILIGINFIGISYIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V FLF+IMM++I + + + + I + + F+
Sbjct: 61 VGAIAVLFLFVIMMINIKLTDILETGSQYTKTLPLALAVGSLFIFIIFSIIKFNYNN 117
>gi|46200213|ref|YP_005880.1| NADH-quinone oxidoreductase chain J [Thermus thermophilus HB27]
gi|46197841|gb|AAS82253.1| NADH-quinone oxidoreductase chain J [Thermus thermophilus HB27]
Length = 179
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
RN I++ +LI F+ AG+++ L A F+ I ++VY GA++V FLF+IM+L
Sbjct: 23 RNAIHAALALILNFLVLAGVYVALDARFLGFIQVIVYAGAIVVLFLFVIMLLFAAQGEIG 82
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYP 145
+ L ++ + + A + KG + +G +LY + +
Sbjct: 83 FDPLVRSKPLAALLALGVAGVLATGLWGLRLAFTQD----LKGGLPQALGPLLYGDWLFV 138
Query: 146 LEISGFIL 153
L +GF+L
Sbjct: 139 LLAAGFLL 146
>gi|156959919|gb|ABU98412.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959924|gb|ABU98416.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959932|gb|ABU98422.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959940|gb|ABU98428.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959944|gb|ABU98431.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959952|gb|ABU98437.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959956|gb|ABU98440.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959964|gb|ABU98446.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959968|gb|ABU98449.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959980|gb|ABU98458.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959988|gb|ABU98464.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959992|gb|ABU98467.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156960000|gb|ABU98473.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156960004|gb|ABU98476.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156960016|gb|ABU98485.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156960024|gb|ABU98491.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156960028|gb|ABU98494.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156960032|gb|ABU98497.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156960036|gb|ABU98500.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
Length = 140
Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
LG +++ +I ++VYVGA+ + FLF+IM++ +V + L L+
Sbjct: 1 LGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTN 60
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI+L +
Sbjct: 61 SPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPS 113
Query: 169 RD----------IKRQDISKQLESN 183
+QD+ Q+
Sbjct: 114 SPFLYNSHGESLRSKQDLFLQISRE 138
>gi|254032034|ref|YP_654089.2| NADH dehydrogenase subunit 6 [Trichoplax adhaerens]
Length = 284
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 52/110 (47%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
S+ + N + SVF LI AF+ ++GLF++LG EF+ +I L+VYVGA+ + FLF+IMM+
Sbjct: 13 SAVTPIYSHNFLASVFWLILAFIGSSGLFIVLGMEFLGLIFLIVYVGAICIIFLFVIMMI 72
Query: 78 DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V K + + ++ F +
Sbjct: 73 PGGSFVGASGAKGAHFIFNWGSSPQSSKSGPSTTFGRAQYKATFGGPAPS 122
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
G+N+E IG VLY Y Y + FILL++MIGAIVL L
Sbjct: 240 GGSNLEAIGSVLYINYYYVFILVSFILLVAMIGAIVLGL 278
>gi|15088741|ref|NP_150111.1| NADH dehydrogenase subunit 6 [Hyaloraphidium curvatum]
gi|15077948|gb|AAK83433.1|AF402142_17 NADH dehydrogenase subunit 6 [Hyaloraphidium curvatum]
Length = 165
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 1/162 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F + ++S LV+T R+PI SV L+ ++ GLFLL+ F+ + ++VY
Sbjct: 1 MNYWLFQILLISIVVSGLLVMTSRSPINSVIYLVLVYLAGGGLFLLMDHTFLGLTLIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV-FSAEGEL 121
VGA+ + FLF + M+++ L + +
Sbjct: 61 VGAIAILFLFTVFMINLRSSTGSNSLNISQLLLILPALGLIFYLGGEQTDSAGLIFAPNW 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVL 163
S L+ + ++ +G +++ Y L + ++LL+ M+ I +
Sbjct: 121 SNLLARPQEMQMLGDLIFNSYPIALLLVAYLLLVIMVAIIKI 162
>gi|49147020|ref|YP_025876.1| NADH dehydrogenase subunit 6 [Moniliophthora perniciosa]
gi|34538665|gb|AAQ74273.1| NADH dehydrogenase subunit 6 [Moniliophthora perniciosa]
Length = 207
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 60/117 (51%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M +L + +F ++SS +T +NP+ SV LI FV +AG +L+G F+ + ++VY
Sbjct: 1 MTTLLINILAFATLLSSIFSITSKNPVISVLFLIGTFVLSAGYLILIGINFIGISYIIVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VGA+ V FLF+IMM++I + + + + I + + F+
Sbjct: 61 VGAIAVLFLFVIMMINIKLTDILETGSQYTKTLPLALAVGSLFIFIIFSIIKFNYNN 117
>gi|242092568|ref|XP_002436774.1| hypothetical protein SORBIDRAFT_10g008595 [Sorghum bicolor]
gi|241914997|gb|EER88141.1| hypothetical protein SORBIDRAFT_10g008595 [Sorghum bicolor]
Length = 103
Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 57/100 (57%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LL +F AMI VV++GA+++
Sbjct: 4 VLSSPALVSGLMVVRAKNPVHSVLFPILVFCDTSGLLILLDLDFSAMIFPVVHIGAIVIS 63
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
FLF++MM +I I R L S IG++ +
Sbjct: 64 FLFVVMMFNIQIAEIHEEVLRYLLVSGIIGLIFWWEMFFI 103
>gi|156960020|gb|ABU98488.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
Length = 140
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
LG +++ +I ++VYVGA+ + FLF+IM++ +V + L L+
Sbjct: 1 LGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTN 60
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI+L +
Sbjct: 61 SPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPS 113
Query: 169 RD----------IKRQDISKQLESN 183
+QD+ Q+
Sbjct: 114 SPFLYNSHSESLRSKQDLFLQISRE 138
>gi|292385453|gb|ADE22013.1| NADH dehydrogenase subunit 6 [Lessonia nigrescens]
Length = 311
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 54/110 (49%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F L + + V + +NP+YS L+ F+ + + LLG EF+A++ L+V
Sbjct: 1 MVDPIIFILIAILGGTLGVKVTSTQNPVYSGLYLVLLFLLGSAISXLLGLEFIALLFLLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y GA+ V LF++MMLD+ K+ I + + I +
Sbjct: 61 YAGAIAVLVLFVVMMLDVKAIERPWSVKKKRFFYLGILLFFSFSIAVIYS 110
>gi|156959928|gb|ABU98419.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
Length = 140
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
LG +++ +I ++VYVGA+ + FLF+IM++ +V + L L+
Sbjct: 1 LGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTN 60
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI+L +
Sbjct: 61 SXKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPS 113
Query: 169 RD----------IKRQDISKQLESN 183
+QD+ Q+
Sbjct: 114 SPFLYNSHGESLRSKQDLFLQISRE 138
>gi|156959960|gb|ABU98443.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
Length = 140
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
LG +++ +I ++VYVGA+ + FLF+IM++ +V + L L+
Sbjct: 1 LGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTN 60
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI+L +
Sbjct: 61 SPKYIS-------NPVIGSRTNIGAIGXHLYTTYYELVLIASLVLLVAMIGAILLAKQPS 113
Query: 169 RD----------IKRQDISKQLESN 183
+QD+ Q+
Sbjct: 114 SPFLYNSHGESLRSKQDLFLQISRE 138
>gi|17063207|gb|AAL32512.1| NADH dehydrogenase subunit 6 [Daucus carota]
Length = 121
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/102 (39%), Positives = 57/102 (55%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S +A++S+ +VV +NP++SV I F N +GL LLLG +F AMI VVY+GA+ V
Sbjct: 5 VLSSLALVSALMVVRAKNPVHSVSFSIPVFRNTSGLLLLLGLDFFAMIFPVVYIGAIAVS 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
FLF+ MM I I R S IG++ + N
Sbjct: 65 FLFVGMMFHIQIAEIHEEVLRYLPVSGIIGLIFWWEMFFILN 106
>gi|58578583|ref|YP_203329.1| NADH dehydrogenase subunit 6 [Smittium culisetae]
gi|57339027|gb|AAW49496.1| NADH dehydrogenase subunit 6 [Smittium culisetae]
Length = 170
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 3/164 (1%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + I L+ NPIYSV SLI F+ LF+ G F+ + ++YVGA+ +
Sbjct: 6 FINILIFIFGLLIFLFINPIYSVLSLISVFILTGILFIFYGLTFIGLSYFIIYVGAISIL 65
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS---RLVF 126
F+F IMML+ D GIL + + + + +S + F
Sbjct: 66 FIFAIMMLETDFPSTIKYLDLKKDIPLITGILCILIYYYLDLSYINNNKNIISGINNIYF 125
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+N++ IG LYT + L + FILLL+MIG I+L L+ ++
Sbjct: 126 YSSNIKLIGYCLYTTHCLWLILISFILLLAMIGPIILCLKMNKN 169
>gi|156959948|gb|ABU98434.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
Length = 140
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
LG +++ +I ++VYVGA+ + FLF+IM++ +V + L L+
Sbjct: 1 LGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTN 60
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI+L +
Sbjct: 61 SPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPS 113
Query: 169 RD----------IKRQDISKQLESN 183
+QD+ Q+
Sbjct: 114 SPFLYNSHGELLRSKQDLFLQISRE 138
>gi|156959976|gb|ABU98455.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959984|gb|ABU98461.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
Length = 140
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
LG + + +I ++VYVGA+ + FLF+IM++ +V + L L+
Sbjct: 1 LGLDXIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTN 60
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI+L +
Sbjct: 61 SPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPS 113
Query: 169 RD----------IKRQDISKQLESN 183
+QD+ Q+
Sbjct: 114 SPFLYNSHGESLRSKQDLFLQISRE 138
>gi|158251753|ref|YP_001504367.1| NADH dehydrogenase subunit 6 [Pleurotus ostreatus]
gi|122893354|gb|ABM67626.1| NADH dehydrogenase subunit 6 [Pleurotus ostreatus]
Length = 206
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F + + + SS +T +NP+ S+ +I FV AAG + +G F+ + +V+Y
Sbjct: 1 MTTFFVNILALGTLFSSVFAITSKNPVISIIFVIATFVQAAGYLIFIGVNFIGISYIVIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V FLF+IMM++I + + + + + F+ +
Sbjct: 61 VGAIAVLFLFVIMMINIKLTDILETGNQYTKNLPLALAIGSLFTYVIFTIIPFNLNNVPA 120
Query: 123 RLVFKGNNV 131
+ + +
Sbjct: 121 LSLISESLI 129
>gi|156960008|gb|ABU98479.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
Length = 140
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
LG +++ +I ++VYVGA+ + FLF+IM++ +V + L L+
Sbjct: 1 LGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTN 60
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ ++ + ++ N+ IG LYT Y + I+ +LL++MIGAI+L +
Sbjct: 61 SPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPS 113
Query: 169 RD----------IKRQDISKQLESN 183
+QD+ Q+
Sbjct: 114 SPFLYNSHGESLRSKQDLXLQISRE 138
>gi|209542886|ref|YP_002275115.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Gluconacetobacter diazotrophicus PAl 5]
gi|209530563|gb|ACI50500.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Gluconacetobacter diazotrophicus PAl 5]
Length = 165
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 3/162 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ F L + + ++++F+ VT N ++++ L+ + AG+F LGA F AM+ +++Y G
Sbjct: 2 NVSFALSALVVVLAAFMTVTRANAVHALLYLVVLLLALAGIFFQLGAPFAAMLEVIIYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A++V F+F++MML++ + + I L ++ +
Sbjct: 62 AIMVLFVFVVMMLNLGATDQRRERAWIVPRVW---IGPVLLAGVLLAALLRALAVTAPAG 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+G VLY YA +E++ F+LL + A +
Sbjct: 119 GGGPIGPAQVGLVLYGPYALTVELASFLLLAGLASAFRIGRH 160
>gi|38639908|ref|NP_943719.1| NADH dehydrogenase subunit 6 [Penicillium marneffei]
gi|33860262|gb|AAQ54920.1| NADH dehydrogenase subunit 6 [Penicillium marneffei]
Length = 194
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 27/188 (14%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ ++I+ L++ +NPI SV LI FVN + L +L+G F+ + ++VYVGAV +
Sbjct: 7 IIYLLSIVFGVLIIINKNPIISVLYLIGLFVNISVLLILVGFGFIGLSYILVYVGAVSIL 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI----------------------- 106
FLFI+M+++I I + +L L+
Sbjct: 67 FLFILMLINIRISELTNETSNYTPLAILTVMLFYFLVGRILPGNFILLNTNLVNSYIIDT 126
Query: 107 ----VCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIV 162
+ +++ + ++ IG V+YT YA L I+ ILLL+M+G+IV
Sbjct: 127 YVNEHIYDELIQYASSKSWDTSLVDMTHITGIGNVMYTNYAILLIIASIILLLAMVGSIV 186
Query: 163 LMLRHRRD 170
+ + +
Sbjct: 187 ITKKGDKR 194
>gi|21228587|ref|NP_634509.1| NADH dehydrogenase subunit J [Methanosarcina mazei Go1]
gi|20907081|gb|AAM32181.1| F420H2 dehydrogenase subunit [Methanosarcina mazei Go1]
Length = 96
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 47/79 (59%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+++ F L + + + + VV ++ + + +LI AGL++LL A+F+ +I ++VY
Sbjct: 11 LETAVFGLLALVTVFFAIFVVIAKDVVRAGLALIMCMFGVAGLYILLNAQFLGVIQVLVY 70
Query: 63 VGAVIVFFLFIIMMLDIDI 81
+GA+ V LF +M+ +I
Sbjct: 71 IGAIGVLILFAVMLTKREI 89
>gi|74310557|ref|YP_313641.1| NADH dehydrogenase subunit 6 [Epidermophyton floccosum]
gi|58429685|gb|AAW78247.1| NADH dehydrogenase subunit 6 [Epidermophyton floccosum]
Length = 199
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 20/175 (11%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + ++I+ + +NP+ SV LI F + +L+G F+ + L+VY+GAV +
Sbjct: 22 ILALISIMFGIYTIVCKNPVISVLFLIGLFSTISIYLILIGLTFIGLSYLLVYIGAVSIL 81
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV--------------------CA 109
FLFI+M+++I I + I ++
Sbjct: 82 FLFILMLINIRISELVSTNNNYIPLAVLSMITLVYILGQKVITNVVQLNTFSSSLFEKSF 141
Query: 110 SNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
++ +S + + IG ++Y+ Y+ L I ILLL+M+G+IV+
Sbjct: 142 KEWINYSNSLSWDTNLIDITHTSAIGNIMYSNYSLWLIIISLILLLAMVGSIVIS 196
>gi|289571365|ref|ZP_06451592.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
T17]
gi|289545119|gb|EFD48767.1| NADH dehydrogenase subunit I J nuoJ [Mycobacterium tuberculosis
T17]
Length = 119
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 51/97 (52%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F++ S +A++ + VV N +YS L + A ++ A F+ ++ +VV
Sbjct: 15 TGEAVMFWVLSALALLGAVGVVLAVNAVYSAMFLAMTMIILAVFYMAQDALFLGVVQVVV 74
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFI 98
Y GAV++ FLF++M++ +D + GS +
Sbjct: 75 YTGAVMMLFLFVLMLIGVDSAESTEGDAAAGSGSRVL 111
>gi|73670844|ref|YP_306859.1| NADH dehydrogenase subunit J [Methanosarcina barkeri str. Fusaro]
gi|72398006|gb|AAZ72279.1| F420H2 dehydrogenase subunit J [Methanosarcina barkeri str.
Fusaro]
Length = 96
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 44/81 (54%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F++ + + + VVT ++ + + +LI A L++LL A+F+ +I ++VY+GA+
Sbjct: 15 VFWVLAISTVFFAVFVVTAKDIVRAGLALIMCMFGIAALYILLNAQFLGIIQVLVYIGAI 74
Query: 67 IVFFLFIIMMLDIDIEVAEPR 87
V LF +M+ +I
Sbjct: 75 GVLILFAVMLTKHEIGGEPGE 95
>gi|256593098|gb|ACV03505.1| NADH dehydrogenase subunit 6 [Acanella eburnea]
gi|256593101|gb|ACV03507.1| NADH dehydrogenase subunit 6 [Orstomisis crosnieri]
gi|256593104|gb|ACV03509.1| NADH dehydrogenase subunit 6 [Gorgonisis sp. SCF-2009]
gi|256593107|gb|ACV03511.1| NADH dehydrogenase subunit 6 [Pteronisis incerta]
gi|256593110|gb|ACV03513.1| NADH dehydrogenase subunit 6 [Plexipomisis sp. SCF-2009]
gi|256593113|gb|ACV03515.1| NADH dehydrogenase subunit 6 [Primnoisis cf. deliculata SCF-2009]
Length = 90
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 55/87 (63%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFL 93
+ FLF+IM++ +V
Sbjct: 64 AILFLFVIMLIQQPNKVDSQDHSHFLP 90
>gi|284164398|ref|YP_003402677.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Haloterrigena turkmenica DSM 5511]
gi|284014053|gb|ADB60004.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Haloterrigena turkmenica DSM 5511]
Length = 91
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 51/86 (59%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++++ F F+ + ++S+ VV + P ++ L A ++ A F++L AEFVAM+ ++V
Sbjct: 1 MLETIAFAAFALVTLLSALGVVLLEEPWHAALMLGVALMSIAVHFVMLAAEFVAMMQILV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPR 87
YVG V+V F +M+ + ++
Sbjct: 61 YVGGVLVLITFAVMLTQREDTTSDSE 86
>gi|156959972|gb|ABU98452.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156959996|gb|ABU98470.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
gi|156960012|gb|ABU98482.1| NADH dehydrogenase subunit 6 [Carijoa riisei]
Length = 141
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 49 LGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
LG +++ +I ++VYVGA+ + FLF+IM++ +V + L L+
Sbjct: 1 LGLDYIGLIFIIVYVGAIAILFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTN 60
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ ++ + ++ N+ IG LYT Y + I+ +L ++MIGAI+L +
Sbjct: 61 SPKYIS-------NPVIGSRTNIGAIGSHLYTTYYELVLIASLVLXVAMIGAILLAKQPS 113
Query: 169 RD----------IKRQDISKQLESN 183
+QD+ Q+
Sbjct: 114 SPFLYNSHGESLRSKQDLFLQISRE 138
>gi|222479144|ref|YP_002565381.1| NADH dehydrogenase subunit J [Halorubrum lacusprofundi ATCC
49239]
gi|222452046|gb|ACM56311.1| NADH dehydrogenase subunit J [Halorubrum lacusprofundi ATCC
49239]
Length = 88
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV ++ F LF+ + + VV R+ ++ L A + A +++L AEF+A + ++
Sbjct: 1 MVYATIAFGLFAAVTLAFGLGVVLARDVFHAALLLGGALTSVAVHYVMLQAEFIAAMQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDID 80
VYVG V++ F +M+ D
Sbjct: 61 VYVGGVLILVTFAVMLTRSD 80
>gi|51245167|ref|YP_065051.1| NADH dehydrogenase, subunit 6 [Desulfotalea psychrophila LSv54]
gi|50876204|emb|CAG36044.1| probable NADH dehydrogenase, subunit 6 [Desulfotalea psychrophila
LSv54]
Length = 177
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 73/167 (43%), Gaps = 4/167 (2%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
L F + + ++ + ++ AGL+ L + F++M+ +++Y+GA
Sbjct: 14 LVFLVTIAITLVGGLITCLAHKLFRALCGFALTSTGVAGLYFFLNSPFISMMQILIYIGA 73
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
V + F +M+ D + + + IG + ++ A F+V A+ + +
Sbjct: 74 VSITISFGVMLASPDSI---KKMQPIKPLAGPIGFAVSGMLAGALMFLVTRADWPIMAKI 130
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
++ IG L TQY+ E+ +LL +++GA+ + R K
Sbjct: 131 TD-GSMRTIGIELLTQYSLVFELISILLLAAILGALAIAREGRSKWK 176
>gi|226227800|ref|YP_002761906.1| NADH-quinone oxidoreductase chain J [Gemmatimonas aurantiaca T-27]
gi|226090991|dbj|BAH39436.1| NADH-quinone oxidoreductase chain J [Gemmatimonas aurantiaca T-27]
Length = 169
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+F +A++S+ ++ ++ P+ +LI + ++ ++ LLG F+A +++YVGAV+VF
Sbjct: 5 VFGLLALVSAASMLVLKEPMRVALALITSMMSLGAIYGLLGVHFIAAFQVLIYVGAVMVF 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
+++IM+L + PR + G L + + +
Sbjct: 65 MVYVIMLLQVRESPNNPRYSSLLVPGLVAGALLLAALAIGMSR--PGVPQAELPASSQSF 122
Query: 130 NVENIGKVLYTQYAYPLEISGF 151
+ +Y E++
Sbjct: 123 GLTEFSTAFLREYWLAFELTSV 144
>gi|254032055|ref|YP_001023823.2| NADH dehydrogenase subunit 6 [Placozoan sp. BZ2423]
Length = 277
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
S+ + N + SVF LI AF+ ++GLF++LG EF+ +I L+VYVGA+ + FLF+IMM+
Sbjct: 13 SAVTPIYSHNFLASVFWLILAFIGSSGLFIVLGMEFLGLIFLIVYVGAICIIFLFVIMMI 72
Query: 78 D 78
Sbjct: 73 P 73
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%)
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ + +N+E IG VLY Y Y + FILL++MIGAIVL L+
Sbjct: 222 YNDSFFAPSAPGCSNLEAIGAVLYINYYYAFILVSFILLVAMIGAIVLGLQSSDRN 277
>gi|84508544|ref|YP_448709.1| NADH dehydrogenase subunit 6 [Dictyota dichotoma]
gi|45925712|gb|AAS79093.1| NADH dehydrogenase subunit 6 [Dictyota dichotoma]
Length = 273
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 46/86 (53%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + F + + VV NP+YS+ L+ FV + + L G +++++I ++V
Sbjct: 1 MFELYLFATVMSLFLALGLNVVISHNPVYSILYLVLFFVTGSSILALFGFDYLSLIFVLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPR 87
YVGA+ V FLF++M+LDI
Sbjct: 61 YVGAIAVLFLFVVMILDIKTINKSGF 86
>gi|300711695|ref|YP_003737509.1| NADH dehydrogenase subunit J [Halalkalicoccus jeotgali B3]
gi|299125378|gb|ADJ15717.1| NADH dehydrogenase subunit J [Halalkalicoccus jeotgali B3]
Length = 102
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 47/78 (60%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV+++ F LF+ + + SS VV VR+ ++ L A ++ A ++ L AEF+A + ++
Sbjct: 1 MVLETAAFVLFAGVTLASSLGVVLVRDVWHAALLLGVALLSVAIHYVTLTAEFLAAVQIL 60
Query: 61 VYVGAVIVFFLFIIMMLD 78
VYVG V++ F +M+
Sbjct: 61 VYVGGVLILITFAVMLTH 78
>gi|271965156|ref|YP_003339352.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J)-like protein
[Streptosporangium roseum DSM 43021]
gi|270508331|gb|ACZ86609.1| NADH:ubiquinone oxidoreductase subunit 6 (chain J)-like protein
[Streptosporangium roseum DSM 43021]
Length = 247
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 69/169 (40%), Gaps = 4/169 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +QS F++ + +++ V V + + F+L+ + + +FLL+ ++ ++ ++
Sbjct: 1 MTLQSAAFWMLATLSVAGGVAVFVVDSMARATFALLTSLICVGLVFLLIDLSYLGVLIVL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+ V +++ +F+IM + + + G+ I L+V VF
Sbjct: 61 MMVMEMLIMAVFMIMFMMNPAGLMPMKMVHNARGAPLIAAGVFVLLVAG----VFLTPWP 116
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
R + +G + + + G +L +MI VL R
Sbjct: 117 RRRGSPPADPTHALGLSIMGPKMLVMMVVGVAILATMISTTVLATHRGR 165
>gi|254032050|ref|YP_001023812.2| NADH dehydrogenase subunit 6 [Placozoan sp. BZ49]
Length = 254
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 18 SSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
S+ N + SVF LI F+ ++GLF++LG EF+ +I L+VYVGA+ + FLF+IMM+
Sbjct: 13 SAVTPTYSYNFLASVFWLILTFIGSSGLFIVLGMEFLGLIFLIVYVGAICIIFLFVIMMI 72
Query: 78 DIDIEVAEPRKKRGF 92
+ + K F
Sbjct: 73 PGGDQKDKETKGYSF 87
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 102 AAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAI 161
AA L + N ++ + + G N+E IG VLY Y Y + FILL++MIGAI
Sbjct: 187 AAALNLAQQNPLLGPNDSFFTLNGSGGTNLEAIGSVLYINYYYAFILVSFILLVAMIGAI 246
Query: 162 VLML 165
VL
Sbjct: 247 VLGR 250
>gi|3122566|sp|Q36836|NU6M_TRIRU RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|1017449|emb|CAA61356.1| ND6 [Trichophyton rubrum]
Length = 203
Score = 55.4 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F++II + +NP+ SV LI F + +++G F+ + L+VY+GAV +
Sbjct: 21 ILAFISIILGIYTIVSKNPVVSVLFLIGLFSTISIYLIMIGLTFIGLSYLLVYIGAVSIL 80
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------------------- 107
FLFI+M+++I I + I ++
Sbjct: 81 FLFILMLINIRISELVSTNNNYIPLAILSMITLVYILGQKIITNVVQFNILNSFTSSLFE 140
Query: 108 -CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ +S + + IG ++Y+ Y++ L I ILLL+M+G+IV+
Sbjct: 141 KSFKESINYSNSLSWDTNLIDITHTSAIGNIMYSSYSFWLIIISLILLLAMVGSIVIS 198
>gi|312183561|gb|ADQ42350.1| NADH:ubiquinone oxidoreductase J [Methanosaeta harundinacea]
Length = 99
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 45/86 (52%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ F L + + + S L V RN ++S L+ +F A L++ L A FV + ++V
Sbjct: 13 LIELGAFSLLAVIILGLSILTVYSRNIVHSGLYLLGSFAAVAALYIFLNATFVGVAQVLV 72
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPR 87
Y+GAV V LF IM+ + E
Sbjct: 73 YIGAVGVLILFAIMLTKKTLMEEETH 98
>gi|67968339|dbj|BAE00239.1| NADH dehydrogenase subunit 6 [Selaginella uncinata]
Length = 179
Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 3/155 (1%)
Query: 16 IISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIM 75
+ S V + N ++ + L A+F A+ + ++ GAV V LF M
Sbjct: 20 VPGSLGVASPANIVHPALPPGSVSACTSLPHPSLNADFAAVAQIPIHAGAVNVPILFAAM 79
Query: 76 MLDIDI--EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE-LSRLVFKGNNVE 132
+ A G + + V + +V
Sbjct: 80 PVSKPKFPHPAPWTVGDGMTSAPRTSASPPPIDVIPDTSRYGMSPIVLRDAGGSPAYSVR 139
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
IG T+ P E +LL++ +GAI++ R
Sbjct: 140 RIGYDSPTESLLPSEPPPIVLLVAPVGAIIVARRE 174
>gi|15088716|ref|NP_150125.1| NADH dehydrogenase subunit 6 [Schizophyllum commune]
gi|15077923|gb|AAK83409.1|AF402141_13 NADH dehydrogenase subunit 6 [Schizophyllum commune]
Length = 215
Score = 54.6 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 59/126 (46%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + + + SS L +T +NP+ SV LI FV AAG + +G F+ + +++Y
Sbjct: 1 MANFIIDFLALGTLFSSILTITFKNPVISVIFLILTFVQAAGYLIFIGINFIGISYIIIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V FLF+IMM+++++ I+++ + + + +
Sbjct: 61 VGAIAVLFLFVIMMINLNLSEILETGNEYTKNLPLAIIISSLFMFIFGAPYILPYKSIIL 120
Query: 123 RLVFKG 128
++
Sbjct: 121 PNLWDI 126
>gi|240266460|ref|YP_002970818.1| NADH dehydrogenase subunit 6 [Trichophyton mentagrophytes]
gi|237781090|gb|ACR19583.1| NADH dehydrogenase subunit 6 [Trichophyton mentagrophytes]
Length = 201
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F++II + +NP+ SV LI F + +L+G F+ + L+VY+GAV +
Sbjct: 21 ILAFISIILGIYTIVSKNPVVSVLFLIGLFSTISIYLILIGLTFIGLSYLLVYIGAVSIL 80
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------------------- 107
FLFI+M+++I I + I ++
Sbjct: 81 FLFILMLINIRISELVSTNNNYIPLAILSMITLVYILGQKIITNVVQFNILNSFTSSLFE 140
Query: 108 -CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ +S + + IG ++Y+ Y+ L I ILLL+M+G+IV+
Sbjct: 141 KSFKESINYSNSLSWDTNLIDITHTSAIGNIMYSSYSLWLIIISLILLLAMVGSIVIS 198
>gi|257051783|ref|YP_003129616.1| NADH dehydrogenase subunit J [Halorhabdus utahensis DSM 12940]
gi|256690546|gb|ACV10883.1| NADH dehydrogenase subunit J [Halorhabdus utahensis DSM 12940]
Length = 90
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 46/83 (55%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
V++ + F LF+ + +S VV VR+ ++ L A ++ A +++ A FVA + ++V
Sbjct: 3 VLELIAFGLFALTTVGASLGVVLVRDVWHAALMLGIALLSVAVFYVMNQAPFVAAMQVLV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVA 84
YVG V++ F +M+ + +
Sbjct: 63 YVGGVLILISFAVMLTRRNDPDS 85
>gi|160688734|gb|ABX45150.1| NADH dehydrogenase subunit 6 [Polysphondylium pallidum]
Length = 299
Score = 54.6 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 49/84 (58%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
NPIYSV +LI F A + ++L EF+A I ++V VGAV V FLFIIMM++I++ +
Sbjct: 25 NPIYSVLNLIIIFWCYACILIILDMEFLACIFILVNVGAVAVLFLFIIMMININVVEIKD 84
Query: 87 RKKRGFLGSFFIGILAAELIVCAS 110
K+ + F+ + LI
Sbjct: 85 NLKKYYPFLIFLSLNIIGLISLII 108
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLM--- 164
A + + F+ + + ++++IG +LY + ++ ILL++M+G I +
Sbjct: 201 ALSLIKFTQYENIYERFVQTTDIKHIGSNLLYASNSIWFILACLILLVAMVGVIYITEEL 260
Query: 165 --LRHRRDIKRQDISKQLESNPDNSIVMVKVKSGKGI 199
R + K Q++ +Q+ + +I VK K I
Sbjct: 261 LIKRRLENNKSQNLFEQISKDYITNIKFYDVKVTKKI 297
>gi|15147304|ref|NP_150308.1| NADH dehydrogenase subunit 6 [Spizellomyces punctatus]
gi|15100073|gb|AAK84237.1|AF404303_11 NADH dehydrogenase subunit 6 [Spizellomyces punctatus]
Length = 260
Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 49/83 (59%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M +YL ++S+ +V + NPI+ + LI F++ + L ++L F+ + ++
Sbjct: 1 MSYICYVYYLIGITGLLSALVVASSLNPIHRIAFLILVFLSGSFLMIILDFYFLGLTYII 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEV 83
VYVGA+++ FLF+IMM+ I +
Sbjct: 61 VYVGAIMILFLFVIMMVQIHLMP 83
>gi|240266491|ref|YP_002970846.1| NADH dehydrogenase subunit 6 [Arthroderma uncinatum]
gi|237781107|gb|ACR19599.1| NADH dehydrogenase subunit 6 [Arthroderma uncinatum]
Length = 201
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 23/178 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F++II + +NPI SV LI F + +L+G F+ + L+VY+GAV +
Sbjct: 21 VLAFISIIFGIYTIISKNPIVSVLFLIALFSTISVYLILIGLTFIGLSYLLVYIGAVSIL 80
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------------------- 107
FLFI+M+++I I + I ++
Sbjct: 81 FLFILMLINIRISELLSTNNNYIPLAILSMITLVYILGQKIIRTVIQLNILNLFSWSFYE 140
Query: 108 -CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ +S + ++ IG ++Y+ Y+ L + ILLL+MIG+IV+
Sbjct: 141 ETLKEIINYSNSINWDSNLIDITHINAIGNIMYSNYSLWLIMISLILLLAMIGSIVIT 198
>gi|240266713|ref|YP_002970790.1| NADH dehydrogenase subunit 6 [Trichophyton rubrum]
gi|237781081|gb|ACR19575.1| NADH dehydrogenase subunit 6 [Trichophyton rubrum]
Length = 201
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +F++II + +NP+ SV LI F + +++G F+ + L+VY+GAV +
Sbjct: 21 ILAFISIILGIYTIVSKNPVVSVLFLIGLFSTISIYLIMIGLTFIGLSYLLVYIGAVSIL 80
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------------------- 107
FLFI+M+++I I + I ++
Sbjct: 81 FLFILMLINIRISELVSTNNNYIPLAILSMITLVYILGQKIITNVVQFNILNSFTSSLFE 140
Query: 108 -CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ +S + + IG ++Y+ Y+ L I ILLL+M+G+IV+
Sbjct: 141 KSFKESINYSNSLSWDTNLIDITHTSAIGNIMYSSYSLWLIIISLILLLAMVGSIVIS 198
>gi|169235559|ref|YP_001688759.1| NADH dehydrogenase subunit J [Halobacterium salinarum R1]
gi|167726625|emb|CAP13410.1| NADH dehydrogenase-like complex subunit J1 [Halobacterium
salinarum R1]
Length = 90
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++L F LF+ + + SS VV VR+ +S L A ++ +++L A F+ + ++
Sbjct: 5 MPYETLAFALFAALTVASSLGVVLVRDVWHSALLLGIALLSIGVHYVMLQAPFLMAMQIL 64
Query: 61 VYVGAVIVFFLFIIMMLDID 80
VYVG V++ F +M+
Sbjct: 65 VYVGGVLILITFAVMLTKKQ 84
>gi|298674251|ref|YP_003726001.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Methanohalobium evestigatum Z-7303]
gi|298287239|gb|ADI73205.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methanohalobium evestigatum Z-7303]
Length = 105
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 46/74 (62%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F L S + I+ S L + R+ + + SLI + + AGL++LL A+F+ ++ ++VYVGAV
Sbjct: 24 AFALLSLIIILFSLLTIVSRDVVRAAISLIVSLFSVAGLYILLNAQFLGVVQVLVYVGAV 83
Query: 67 IVFFLFIIMMLDID 80
V LF +M+ +
Sbjct: 84 GVLILFGVMLTKTE 97
>gi|240266527|ref|YP_002970874.1| NADH dehydrogenase subunit 6 [Arthroderma obtusum]
gi|237781129|gb|ACR19620.1| NADH dehydrogenase subunit 6 [Arthroderma obtusum]
Length = 202
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 75/178 (42%), Gaps = 23/178 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + ++II + +NP+ SV LI F + +L+G F+ + L+VY+GAV +
Sbjct: 22 ILALISIILGIYTIVSKNPVVSVLFLIGLFSTISIYLILIGLTFIGISYLLVYIGAVSIL 81
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------------------- 107
FLFI+M+++I I + I ++
Sbjct: 82 FLFILMLINIRISELVSTNNNYIPLAILSMITLVYILGQKIITNIVQFNILNSLSSSLFE 141
Query: 108 -CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ +S + + IG ++Y+ Y+ L I ILLL+M+G+IV+
Sbjct: 142 KSFKESINYSNSLSWDTNLIDITHTSAIGNIMYSSYSLWLIIISLILLLAMVGSIVIS 199
>gi|168700376|ref|ZP_02732653.1| hypothetical protein GobsU_12670 [Gemmata obscuriglobus UQM 2246]
Length = 410
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 54/108 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
V+ + F+LFS A++ ++V +NP + F ++ GLFLLL A F+ T+++
Sbjct: 68 VIGTALFWLFSAGALVFGTVLVVQKNPARGAIAFAFVILSVCGLFLLLAAPFLMAATVII 127
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y GA+IV FLF++M+ R + GSF ++
Sbjct: 128 YAGAIIVTFLFVLMLSQAGTSNENDRTREPLYGSFAGFAFVGLVLFTL 175
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
NV N+G VLY+Q+ +E++G +LL+++IGA+ + R
Sbjct: 363 ADLPAGNVRNLGFVLYSQHLLAVELAGTLLLVAVIGAVAITHRK 406
>gi|15789838|ref|NP_279662.1| NADH dehydrogenase subunit J [Halobacterium sp. NRC-1]
gi|10580232|gb|AAG19142.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
Length = 86
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 44/80 (55%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++L F LF+ + + SS VV VR+ +S L A ++ +++L A F+ + ++
Sbjct: 1 MPYETLAFALFAALTVASSLGVVLVRDVWHSALLLGIALLSIGVHYVMLQAPFLMAMQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDID 80
VYVG V++ F +M+
Sbjct: 61 VYVGGVLILITFAVMLTKKQ 80
>gi|46202537|ref|ZP_00208557.1| COG0839: NADH:ubiquinone oxidoreductase subunit 6 (chain J)
[Magnetospirillum magnetotacticum MS-1]
Length = 57
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLF 46
+ +L FY+F+ +A+ S +V++ RNP++SV LI AF NA F
Sbjct: 1 MFTALIFYMFAAIAVASGVMVISSRNPVHSVLWLILAFFNARACF 45
>gi|257387969|ref|YP_003177742.1| NADH dehydrogenase subunit J [Halomicrobium mukohataei DSM 12286]
gi|257170276|gb|ACV48035.1| NADH dehydrogenase subunit J [Halomicrobium mukohataei DSM 12286]
Length = 90
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
+++ F LF+ + I SS+ VV VR+ +S L A ++ A +L+L AEFVA + ++VYV
Sbjct: 6 ETIAFVLFAVVTIASSWGVVLVRDVWHSALLLGVALLSVAVHYLMLRAEFVAAMQILVYV 65
Query: 64 GAVIVFFLFIIMMLDIDIEVAE 85
G V++ F +M+ D V E
Sbjct: 66 GGVLILITFAVMLTRKDESVVE 87
>gi|11465920|ref|NP_046137.1| NADH dehydrogenase subunit 6 [Chlamydomonas moewusii]
gi|2865266|gb|AAC39349.1| NADH dehydrogenase subunit 6 [Chlamydomonas moewusii]
Length = 171
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 7/156 (4%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+ V R+P S+ + F+NA+ + L+LG EF+A++ ++VYVGA+ V FLF+IM+L+
Sbjct: 16 AISVSWTRSPFMSLMFAVMLFINASIVLLMLGFEFLALVNMLVYVGALAVLFLFVIMLLE 75
Query: 79 IDIEVAEPRKKRG-------FLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
I + LG + +A A S ++ V ++
Sbjct: 76 IPSAELRAYHRGWSTLALFGILGCWRYASVAPITKTGALMDTFKSPIMSVAGFVPTLESI 135
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+G Y +YA L I+ +L +++ GA+VL
Sbjct: 136 NYVGHAFYIRYADVLIINSLVLTVALFGALVLANTK 171
>gi|209427647|ref|YP_002274321.1| NADH dehydrogenase subunit 6 [Blastocladiella emersonii]
gi|82492275|gb|ABB78014.1| NADH dehydrogenase subunit 6 [Blastocladiella emersonii]
Length = 201
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTV-RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITL 59
M + FYL S + I+S L + + +NPI SV L+ FVN A +F+LLG + I +
Sbjct: 1 MTLTWGVFYLLSVLTILSGVLTIVMGKNPINSVVYLVSCFVNCALIFILLGVNLLGFIYI 60
Query: 60 VVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+VYVGA+ + F+F+IMM+D+ +E G + A +I ++ ++
Sbjct: 61 IVYVGAIAILFIFVIMMMDLRNLTSEKEMSSNSKGFLSLSYPLALIIAISTLLLMMKENN 120
Query: 120 ELSRLVFKGN----------------------------------NVENIGKVLYTQYAYP 145
L + + ++G +LYT +
Sbjct: 121 LSVILQITTDLGSSIGKIVVNDFTTWEIAQRNIWDSLIQSSMNTVLHSVGYLLYTDFLSL 180
Query: 146 LEISGFILLLSMIGAIVLML 165
L ++ ILL+ MI I L+
Sbjct: 181 LLLASLILLMVMISVIALIK 200
>gi|189502385|ref|YP_001958102.1| hypothetical protein Aasi_1025 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497826|gb|ACE06373.1| hypothetical protein Aasi_1025 [Candidatus Amoebophilus asiaticus
5a2]
Length = 173
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +L + F+ + + S +++ + +++ LI + + L+ L GA FV++I L++
Sbjct: 1 MFINLLYVFFAVLVAVGSLVILFAKQEFFALLMLILIVIFLSTLYFLQGAPFVSIIQLIL 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN-FMVFSAEGE 120
+ G ++V + ++ I+ + IG ++ L+ N S
Sbjct: 61 HAGGILVLLICSLLFFKHAIKAPNNTDNKIIYKRIVIGAISIGLVGYLCNKLSTISYLFN 120
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
L ++ +G + Y LE+ +LL++++G + ++ +
Sbjct: 121 LPASNRPVGTIQQLGYQILGPYGLILELISILLLITLVGVLHIIHQR 167
>gi|240266722|ref|YP_002970902.1| NADH dehydrogenase subunit 6 [Microsporum canis]
gi|237781138|gb|ACR19628.1| NADH dehydrogenase subunit 6 [Arthroderma otae]
Length = 201
Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 23/178 (12%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + ++II + +NP+ SV LI F + +L+G F+ + L+VY+GAV +
Sbjct: 21 IIALISIILGIYTIISKNPVVSVLFLIGLFSTISIYLILIGLTFIGLSYLLVYIGAVSIL 80
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI----------------------- 106
FLFI+M+++I I + I ++
Sbjct: 81 FLFILMLINIRISELVSTNNNYIPLAILSMITLVYILGQKIITNIIQYNILNSFSFSFFE 140
Query: 107 VCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
+ +S + ++ IG V+Y+ Y+ L I ILLL+M+G+IV+
Sbjct: 141 KSFKESINYSNSLSWDTNLIDITHISAIGNVMYSSYSLWLIIISLILLLAMVGSIVIS 198
>gi|17351909|dbj|BAB78595.1| NADH dehydrogenase subunit 6 [Volvox carteri f. nagariensis]
gi|189304013|gb|ACD85988.1| NADH dehydrogenase subunit 6 [Volvox carteri f. nagariensis]
gi|261498876|gb|ACX84830.1| NADH dehydrogenase subunit 6 [Volvox carteri f. nagariensis]
gi|261888215|gb|ACY06069.1| NADH dehydrogenase subunit 6 [Volvox carteri f. nagariensis]
Length = 162
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ +L + ++I V ++P S+ + F+N++ + ++LG EF+A++ L+
Sbjct: 1 MFFENCAIFLCALLSIA----VAYTKSPFMSLMYSVMLFINSSFVLMMLGFEFLALVNLL 56
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGA+ V FLF+IM+L+I + IL + V S G
Sbjct: 57 VYVGALAVLFLFVIMLLEIPATELRAYSLGWSSLGILVFILNGVIQVTPSMGSRGIISG- 115
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ ++ N+G LY +A L ++ F+L +++ GA +
Sbjct: 116 ----LPGAESISNLGHALYLYFADLLILNSFVLTVALFGAFAIAPVRTTG 161
>gi|162009884|gb|ABX82066.1| NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
gi|162009893|gb|ABX82074.1| NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
gi|162009902|gb|ABX82082.1| NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
gi|162009911|gb|ABX82090.1| NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
gi|162009920|gb|ABX82098.1| NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
gi|162145625|gb|ABX82846.1| NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
gi|162145635|gb|ABX82855.1| NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
Length = 162
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 9/170 (5%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ L + ++I V ++P S+ + F+N++ + ++LG EF+A++ L+
Sbjct: 1 MFFENSAILLCALLSIA----VGYTKSPFMSLMYSVMLFINSSFVLMMLGFEFLALVNLL 56
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGA+ V FLF+IM+L+I + F+ I+
Sbjct: 57 VYVGALAVLFLFVIMLLEIPATELRAYSRGWSTLGIFVFIING-----VFQITPSMGPRG 111
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + ++ N+G LY +A L ++ +L +++ GA +
Sbjct: 112 IITGLPGAESITNLGHALYLYFADLLILNSLVLTVALFGAFAIAPVRTTG 161
>gi|11465931|ref|NP_050064.1| NADH dehydrogenase subunit 6 [Pedinomonas minor]
gi|4378775|gb|AAD19673.1| NADH dehydrogenase subunit 6 [Pedinomonas minor]
Length = 190
Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 4/149 (2%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
+ +N I ++ +F+ A ++LL F+ +I ++VYVGAV+V FLF+IMM+ + I
Sbjct: 23 TILTKNAILVALYIVGSFILAGLIYLLANFPFLGVILILVYVGAVVVLFLFVIMMIPLRI 82
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ 141
E F F +L SR N + + ++Y
Sbjct: 83 VFFENNFSIFFFNYFLWTVLLVFFFSSFDILSTSFELIFQSRT----NLFQLLALIIYLD 138
Query: 142 YAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + F+L +SMIGAI + +
Sbjct: 139 NVWYFLFAAFLLTISMIGAISITQTKSVN 167
>gi|86553036|gb|ABC98216.1| NADH dehydrogenase subunit 6 [Chlamydomonas incerta]
Length = 162
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 9/170 (5%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ L + ++I V ++P S+ + F+N++ + ++LG EF+A++ L+
Sbjct: 1 MFFENSAILLCALLSIA----VGYTKSPFMSLMYSVMLFINSSFVLMMLGFEFLALVNLL 56
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGA+ V FLF+IM+L+I + F+ ++
Sbjct: 57 VYVGALAVLFLFVIMLLEIPATELRAYSRGWSTLGIFVFVVNG-----VFQITPSMGPRG 111
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + ++ N+G LY +A L ++ +L +++ GA +
Sbjct: 112 IITGLPGAESITNLGHALYLYFADLLILNSLVLTVALFGAFAIAPVRTTG 161
>gi|316935777|ref|YP_004110759.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Rhodopseudomonas palustris DX-1]
gi|315603491|gb|ADU46026.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Rhodopseudomonas palustris DX-1]
Length = 168
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 76/167 (45%), Gaps = 4/167 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M SL A+IS+ L VT N ++++ L+ + A F LGA F A++ ++VY
Sbjct: 1 MSSLLAIYAGAFALISAALSVTRPNAVHALLYLVVTLLALAVCFFALGAAFAAVLLILVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F++M L + E + + + V VF G +
Sbjct: 61 AGAIVVLFVFVVMTLPVSPEAITRERALLRGAWP----VPLLMSVLIIAPFVFGEFGLTA 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + +GK+L+ +A +E++ +LL +IG + R
Sbjct: 117 AGQPAPVSAQEVGKLLFGPWALAVELASLLLLAGLIGVRHIGRSDRS 163
>gi|20090360|ref|NP_616435.1| NADH dehydrogenase subunit J [Methanosarcina acetivorans C2A]
gi|19915365|gb|AAM04915.1| F(420)H(2) dehydrogenase, subunit FpoJ [Methanosarcina
acetivorans C2A]
Length = 96
Score = 51.9 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
++ F L +F+ + + VV ++ + + +LI A L++LL A+F+ +I ++VY
Sbjct: 11 LEMAVFGLLAFVTVFFAIFVVIAKDVVRAGLALIMCMFGVAALYILLNAQFLGIIQVLVY 70
Query: 63 VGAVIVFFLFIIMML 77
+GA+ V LF +M+
Sbjct: 71 IGAIGVLILFAVMLT 85
>gi|294496243|ref|YP_003542736.1| hypothetical protein Mmah_1595 [Methanohalophilus mahii DSM 5219]
gi|292667242|gb|ADE37091.1| hypothetical protein Mmah_1595 [Methanohalophilus mahii DSM 5219]
Length = 90
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 46/74 (62%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++L F++ + + I S V ++ + + +L+F+ AGLF+ L A+F+ ++ ++VYV
Sbjct: 6 EALVFFILAAVVIFFSLAAVLSKDIVRAALALVFSMFTVAGLFITLNAQFLGVVQILVYV 65
Query: 64 GAVIVFFLFIIMML 77
GA+ V LF +M+
Sbjct: 66 GAIGVLILFAVMLT 79
>gi|15897267|ref|NP_341872.1| NADH dehydrogenase subunit J (NuoJ) [Sulfolobus solfataricus P2]
gi|284174516|ref|ZP_06388485.1| NADH dehydrogenase subunit J (NuoJ) [Sulfolobus solfataricus 98/2]
gi|13813472|gb|AAK40662.1| NADH dehydrogenase subunit J (NuoJ) [Sulfolobus solfataricus P2]
gi|261601936|gb|ACX91539.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
solfataricus 98/2]
Length = 167
Score = 51.6 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAE----FVAMI 57
++Q + F F M I S +V +N Y SL F ++ A L + L A ++
Sbjct: 8 IIQYILFGFFGVMTIAFSIYIVRAKNVFYGAVSLAFLGLSIAAL-IALEAPSTYGIYSVF 66
Query: 58 TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA 117
+++YVGA + F ++M + G +GILA + +VF +
Sbjct: 67 HILLYVGATVTFLAISLVMF---------KDLEVKFGRGALGILAGGAVTLLFLIIVFIS 117
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
++S + N + + L Y +PL I LL ++I AI L R
Sbjct: 118 IPQVSSAEVQPINFQVLANDLIENYWFPLIILVIALLTTLIEAISLARR 166
>gi|30315629|ref|NP_847980.1| NADH dehydrogenase subunit 6 [Harpochytrium sp. JEL94]
gi|30230282|gb|AAO62892.1| NADH dehydrogenase subunit 6 [Harpochytrium sp. JEL94]
Length = 201
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 75/196 (38%), Gaps = 34/196 (17%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + LV+ R+PI SV L ++ G+FLLL F+ + ++V
Sbjct: 1 MINYWLYEAFLVLIGLCGVLVIVSRSPINSVLFLCGMYLAGGGIFLLLDHYFLGLTLIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV------- 114
YVGA+ + FLF I M+++ + + + A I A
Sbjct: 61 YVGAIAILFLFTIFMINVRLTLQLGSFASPLAAILLLAGFAFYFIFFADLSFSQDLPVLS 120
Query: 115 ---------------------------FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
+ S L+ + +++ + +++ Y L
Sbjct: 121 SLFGSSQTIVNNDTTLVTSGNWESNFRSIYASDWSHLLGRPSDLTMLANMIFYAYPLALI 180
Query: 148 ISGFILLLSMIGAIVL 163
+ GF+LL+ M+ I +
Sbjct: 181 LVGFLLLVVMVAIIKI 196
>gi|29126612|ref|NP_803515.1| NADH dehydrogenase subunit 6 [Monoblepharella sp. JEL15]
gi|29029510|gb|AAO64960.1| NADH dehydrogenase subunit 6 [Monoblepharella sp. JEL15]
Length = 193
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 75/188 (39%), Gaps = 26/188 (13%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + + LV+ R+PI SV L ++ G+FLLL F+ + ++V
Sbjct: 1 MINYWLYEAFLVLIGLCGVLVIVSRSPINSVLFLCGLYLAGGGIFLLLDHYFLGLTLIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV------- 114
YVGA+ + FLF I M+++ + + + A I A
Sbjct: 61 YVGAIAILFLFTIFMINVRLTLQLGSFASPVAAILLLTGFAIYFIFFADLSFSQDLPLLS 120
Query: 115 -------------------FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLL 155
+ S L+ + +++ + +++ Y L + GF+LL+
Sbjct: 121 SIFSSTDASSLSSWESDLRSVYASDWSHLLGRPSDLTMLANMIFHAYPLALILVGFLLLV 180
Query: 156 SMIGAIVL 163
M+ I +
Sbjct: 181 VMVAIIKI 188
>gi|11467094|ref|NP_042569.1| NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
gi|128811|sp|P10329|NU6M_CHLRE RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|12507|emb|CAA38644.1| mitochondrial NADH dehydrogenase subunit 6 [Chlamydomonas
reinhardtii]
gi|563697|gb|AAB93445.1| NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
Length = 162
Score = 51.2 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 76/170 (44%), Gaps = 9/170 (5%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ L + ++I V ++P S+ + F+N++ + ++LG EF+A++ L+
Sbjct: 1 MFFENSAILLCALLSIA----VGYTKSPFMSLMYSVMLFINSSFVLMMLGFEFLALVNLL 56
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VYVGA+ V FLF+IM+L+I + F+ I+
Sbjct: 57 VYVGALAVLFLFVIMLLEIPATELRAYSRGWSTLGIFVFIING-----VFQITPSMGPRG 111
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + ++ N+G LY +A L ++ +L +++ G +
Sbjct: 112 IITGLPGAESITNLGHALYLYFADLLILNSLVLTVALFGRFAIAPVRTTG 161
>gi|224474105|gb|ACN49296.1| Nad6p [Candida orthopsilosis]
Length = 155
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 73/153 (47%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
++ ISS L + + +P+ S+ LI FV+AA G + ++ +++YVGA+ + FLF
Sbjct: 3 LISGISSILAIGLLSPVQSIVCLIALFVSAAISLYSNGFVLMGILYVLIYVGAIAILFLF 62
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
I+ +L+I+ F I + + L+ +
Sbjct: 63 ILSLLNIEYNYKGTIHPLIFTILLICLIPLDLSYETYGIVENVNIAYPFNGLLDWDLELS 122
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+G +LYT+YA P+ G IL+LS+IGAI +
Sbjct: 123 TVGTLLYTEYAIPMIFIGLILILSVIGAIAITK 155
>gi|227828037|ref|YP_002829817.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus M.14.25]
gi|227830774|ref|YP_002832554.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus L.S.2.15]
gi|229579670|ref|YP_002838069.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus Y.G.57.14]
gi|229581664|ref|YP_002840063.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus Y.N.15.51]
gi|229585306|ref|YP_002843808.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus M.16.27]
gi|238620267|ref|YP_002915093.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus M.16.4]
gi|284998288|ref|YP_003420056.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Sulfolobus
islandicus L.D.8.5]
gi|227457222|gb|ACP35909.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus L.S.2.15]
gi|227459833|gb|ACP38519.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus M.14.25]
gi|228010385|gb|ACP46147.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus Y.G.57.14]
gi|228012380|gb|ACP48141.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus Y.N.15.51]
gi|228020356|gb|ACP55763.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus M.16.27]
gi|238381337|gb|ACR42425.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus M.16.4]
gi|284446184|gb|ADB87686.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Sulfolobus
islandicus L.D.8.5]
gi|323475128|gb|ADX85734.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus REY15A]
gi|323477860|gb|ADX83098.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Sulfolobus
islandicus HVE10/4]
Length = 167
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 14/169 (8%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAE----FVAMI 57
++Q F F MAI S +V +N Y SL F ++ A L + L A ++
Sbjct: 8 IIQYTLFAFFGTMAIAFSIYIVRAKNVFYGAVSLAFLGLSIAAL-IALEAPSTYGIYSVF 66
Query: 58 TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA 117
+++YVGA + F ++M +GILA + +F +
Sbjct: 67 HILLYVGATVTFLAISLVMFKDLEVRIRRGS---------LGILAGGAVTLLFLITIFIS 117
Query: 118 EGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
++S + N + + L Y +PL I LL ++I AI L R
Sbjct: 118 NFKVSPSTLQPINFQILANDLLENYWFPLIILIVALLTTLIEAIALARR 166
>gi|55378234|ref|YP_136084.1| NADH dehydrogenase subunit J [Haloarcula marismortui ATCC 43049]
gi|55230959|gb|AAV46378.1| NAD(P)H-quinone oxidoreductase chain 6 [Haloarcula marismortui
ATCC 43049]
Length = 89
Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 48/84 (57%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ +S+ F LF+ + + S+ VV VR+ +S L + ++ A +++ A FVA + ++V
Sbjct: 3 LAESIAFALFAIVTVGSAAGVVLVRDVWHSALLLGVSLISVAVFYVMNQAAFVATMQILV 62
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAE 85
YVG V++ F +M+ D V E
Sbjct: 63 YVGGVLILITFAVMLTREDESVIE 86
>gi|11466304|ref|NP_051132.1| NADH dehydrogenase subunit 6 [Cafeteria roenbergensis]
gi|6180086|gb|AAF05783.1|AF193903_6 NADH dehydrogenase subunit 6 [Cafeteria roenbergensis]
Length = 250
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
N I+S+ L+ F+ + L EF+ +I L++Y+GA++V FLF++MMLDI +
Sbjct: 26 NTIHSLLLLLELFIIGSLLLFFFKVEFLGLIFLMIYLGAILVLFLFVVMMLDIKTTAVQN 85
Query: 87 -------------------RKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
F F+ + + A ++ + + +L+
Sbjct: 86 DDLNQFIFKGLGLFFFIPVFVWWIFGDVIFLSAMWQSFVKTAVHWSFSLSILDFFQLINF 145
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI--KRQDISKQLESN 183
+N+E +G ++ + G IL ++MIGAIV+ + + + K Q+ Q
Sbjct: 146 SSNLEVVGWYIFDFQPILFLLCGVILYIAMIGAIVVSVDSQMNSNQKIQNALVQGMRR 203
>gi|29126634|ref|NP_803496.1| NADH dehydrogenase subunit 6 [Harpochytrium sp. JEL105]
gi|29029490|gb|AAO64941.1| NADH dehydrogenase subunit 6 [Harpochytrium sp. JEL105]
Length = 203
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 36/198 (18%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F + +S LV+ R+PI SV L ++ G+FLLL F+ + ++V
Sbjct: 1 MINYWLYETFLVLIGLSGVLVIVSRSPINSVLFLCGLYLAGGGIFLLLDHYFLGLTLIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS----------- 110
YVGA+ + FLF I M+++ + + + ++ A
Sbjct: 61 YVGAIAILFLFTIFMINVRLTLQLGSFASPLAAFALLIGFGLYFLLFADFSSYKDLPILS 120
Query: 111 -------------------------NFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYP 145
N + + S L+ + +++ + +++ Y
Sbjct: 121 SILGSSHSLPVDGINSQILPDGAWENSLRSLYASDWSHLLGRPSDLTMLANMIFYAYPLA 180
Query: 146 LEISGFILLLSMIGAIVL 163
L + GF+LL+ M+ I +
Sbjct: 181 LILVGFLLLVVMVAIIKI 198
>gi|218509387|ref|ZP_03507265.1| hypothetical protein RetlB5_18674 [Rhizobium etli Brasil 5]
Length = 118
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/55 (70%), Positives = 42/55 (76%)
Query: 31 SVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
SV LI F NAAGLFLLLGAEF+AMI LVVYVGAV V FLF++MMLDID
Sbjct: 57 SVLFLILVFFNAAGLFLLLGAEFLAMILLVVYVGAVAVLFLFVVMMLDIDFTELR 111
>gi|254033624|ref|YP_003029829.1| NADH dehydrogenase subunit 6 [Dunaliella salina]
gi|246880710|gb|ACS95023.1| NADH dehydrogenase subunit 6 [Dunaliella salina]
Length = 157
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ Y F + S LV +N S+ I ++N+ + L LG EF+A+I ++VYVGA
Sbjct: 2 ILEYSFIALLAFLSILVSQTKNVFMSLMYSILLYINSFVVLLSLGFEFLAIINVLVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+ V FLF+IM+L+I + + A L + + + +
Sbjct: 62 LAVLFLFVIMLLEIPSTELR--------AYYRGYSVLAMLGFLSVRLFSVNNSHTIFTFI 113
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
++ N+G Y YA L ++ IL +++ GA+VL
Sbjct: 114 PTLESISNVGYAFYIVYADVLVLNSLILTIALFGALVLAHNQ 155
>gi|15147287|ref|NP_150360.1| NADH dehydrogenase subunit 6 [Rhizophydium sp. 136]
gi|15100129|gb|AAK84290.1|AF404306_32 NADH dehydrogenase subunit 6 [Rhizophydium sp. 136]
Length = 269
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 50/85 (58%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + L + I+SSFL++T NP+ + LI F+ +A ++LLL F+ + ++V
Sbjct: 1 MLIKILVKLICTIGILSSFLILTSLNPVTRLVLLIIVFIMSAFIYLLLDFYFLGLTYIIV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEP 86
YVGA+ + FLF+IMM ++
Sbjct: 61 YVGAIAILFLFVIMMSEVKETPQPN 85
>gi|76801795|ref|YP_326803.1| NADH dehydrogenase subunit J [Natronomonas pharaonis DSM 2160]
gi|76557660|emb|CAI49243.1| NADH dehydrogenase-like complex, subunit J1 [Natronomonas
pharaonis DSM 2160]
Length = 91
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 16 IISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIM 75
+ +S VV R+ +S L A + A +++L AEF+A+I ++VYVG V++ F +M
Sbjct: 19 VGASLGVVLARDVWHSALFLGAALFSVAVHYVMLRAEFLAVIQVLVYVGGVLILITFAVM 78
Query: 76 MLDIDIEVAE 85
++ D E
Sbjct: 79 LVRQDNTGGE 88
>gi|329940453|ref|ZP_08289734.1| putative NADH dehydrogenase chain J [Streptomyces griseoaurantiacus
M045]
gi|329300514|gb|EGG44411.1| putative NADH dehydrogenase chain J [Streptomyces griseoaurantiacus
M045]
Length = 189
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 61/153 (39%), Gaps = 4/153 (2%)
Query: 17 ISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMM 76
LV T+ + F+L+ + V G+ +LG ++ ++ +++ V +++ +F+I
Sbjct: 18 AGGVLVFTLNSMARVTFALLGSLVCVGGVVTVLGLPYLGVVIVLMMVMEMVIMAVFMIAY 77
Query: 77 LDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGK 136
+ + G+ + + L+ A +F+ V + IG
Sbjct: 78 MMNPAGLMPMSMLHNKRGALAV----SSLVFAALVAGIFAVPWPRRAGVRPDDTTLQIGM 133
Query: 137 VLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
L + G +LL +M+GA VL R
Sbjct: 134 SLMGGQMLTMVTLGIVLLATMVGATVLATHRGR 166
>gi|91975814|ref|YP_568473.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Rhodopseudomonas palustris BisB5]
gi|91682270|gb|ABE38572.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Rhodopseudomonas palustris BisB5]
Length = 168
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 76/171 (44%), Gaps = 4/171 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L A++S+ + VT N ++++ L+ + A F LGA F A++ +++Y
Sbjct: 1 MSLLLAIYAGAFALVSAAIAVTRPNAVHALLYLVVTLLALAVAFFALGAAFAAVLLIMIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F++M L I E + + L V VF G +
Sbjct: 61 AGAIVVLFVFVVMTLPISPESMTRERASLRGAWP----VPLLLSVLIIAPFVFGEFGIAA 116
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + +G++L+ +A +E++ +LL +IG + R R
Sbjct: 117 NTAAAPVSAQQVGRLLFGPWALAVELASLLLLAGLIGVRHIGRSDRTPRSR 167
>gi|28972928|gb|AAM95264.1| NADH dehydrogenase subunit 6 [Muriceopsis bayeri]
gi|28972950|gb|AAM95275.1| NADH dehydrogenase subunit 6 [Muriceopsis flavida]
Length = 120
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V I L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVDSQDHSHFLPVGLSIIFLFYSLLTNSPKYIS-------NPVIGSR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK----------RQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPSLYNSPGESLRSRQDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|4761220|gb|AAD29282.1|AF113909_1 NADH dehydrogenase ND6 subunit [Suaeda japonica]
Length = 146
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%)
Query: 25 VRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVA 84
NPI+S FSL V + ++L + FVA L++YVGA+ V +F +M ++
Sbjct: 29 FTNPIFSAFSLGLVLVCISLFYILANSHFVASAQLLIYVGAINVLIIFSVMFMNGPEYDK 88
Query: 85 EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
G + + +++ ++ + + + I
Sbjct: 89 NYHLWTVGDGITSLVCTSLFVLLTSTILNTSWYGIIWTTKSNQILEQDLI 138
>gi|28972900|gb|AAM95250.1| NADH dehydrogenase subunit 6 [Pterogorgia citrina]
Length = 120
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIGSR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK----------RQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPSLYNSPGESLRSRQDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|28972902|gb|AAM95251.1| NADH dehydrogenase subunit 6 [Pterogorgia anceps]
gi|28972904|gb|AAM95252.1| NADH dehydrogenase subunit 6 [Eunicea knighti]
gi|28972906|gb|AAM95253.1| NADH dehydrogenase subunit 6 [Eunicea sp. Bahamas-JS-2002]
gi|28972908|gb|AAM95254.1| NADH dehydrogenase subunit 6 [Eunicea tourneforti]
gi|28972910|gb|AAM95255.1| NADH dehydrogenase subunit 6 [Eunicea fusca]
gi|28972916|gb|AAM95258.1| NADH dehydrogenase subunit 6 [Plexaura homomalla]
gi|28972918|gb|AAM95259.1| NADH dehydrogenase subunit 6 [Plexaura flexuosa]
Length = 120
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIGSR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK----------RQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPSLYNSHGESLRSRQDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|292655143|ref|YP_003535040.1| NADH dehydrogenase-like complex subunit J1 [Haloferax volcanii
DS2]
gi|291372449|gb|ADE04676.1| NADH dehydrogenase-like complex subunit J1 [Haloferax volcanii
DS2]
Length = 86
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 49/80 (61%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV +++ F LF+ + + S VV VR+ +S L A ++ A +++L AEF+A + ++
Sbjct: 1 MVYETIAFALFALVTVGCSLGVVLVRDIWHSALLLGGALLSVAVHYVMLQAEFLAAMQVL 60
Query: 61 VYVGAVIVFFLFIIMMLDID 80
VYVG V++ F +M+ I+
Sbjct: 61 VYVGGVLILITFAVMLTRIN 80
>gi|28972920|gb|AAM95260.1| NADH dehydrogenase subunit 6 [Plexaura kuna]
Length = 120
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIGSR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK----------RQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPSLYTSHGESLRSRQDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|3413802|emb|CAA73989.1| NADH dehydrogenase subunit 6 [Chlorogonium elongatum]
Length = 165
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
+ + SFL+ N S+ + FVNA + L LG EF+A++ ++VYVGA+ V F
Sbjct: 5 LIVLLALLSFLISWTGNVFMSLMYAVMLFVNATLVLLSLGFEFLALVNMLVYVGALAVLF 64
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNN 130
LF+IM+L+I + + +F G++ + S + + ++ N
Sbjct: 65 LFVIMLLEIPSAELRAYYRGYSVLTF-FGLIVVLIKQFGVALPFGSPNSQGAPYIYSFNC 123
Query: 131 ----VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ NIG Y +YA L ++ +L +++ GA+VL
Sbjct: 124 TSESISNIGVAFYIRYADVLILNSLVLTIALFGALVLAHSR 164
>gi|28972898|gb|AAM95249.1| NADH dehydrogenase subunit 6 [Pseudoplexaura crucis]
gi|28972912|gb|AAM95256.1| NADH dehydrogenase subunit 6 [Muricea muricata]
Length = 120
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIGSK 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK----------RQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPSLYNSHGKLLRSRQDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|313126881|ref|YP_004037151.1| NADH dehydrogenase subunit j [Halogeometricum borinquense DSM
11551]
gi|312293246|gb|ADQ67706.1| NADH dehydrogenase subunit J [Halogeometricum borinquense DSM
11551]
Length = 86
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV +++ F LF+ + + S VV VR+ +S L A ++ A +++L AEF+A + ++
Sbjct: 1 MVYETIAFALFALITVGCSLGVVLVRDIWHSALLLGGALLSVAVHYVMLQAEFLAAMQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDID 80
VYVG V++ F +M+
Sbjct: 61 VYVGGVLILVTFAVMLTRTR 80
>gi|301353474|ref|YP_003795695.1| NADH dehydrogenase subunit 6 [Phakopsora meibomiae]
gi|253807598|gb|ACT36177.1| NADH dehydrogenase subunit 6 [Phakopsora meibomiae]
Length = 194
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 20 FLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDI 79
+V+T +P+ SV LI F+ A + +++++ ++VYVGA+IV LF+I+++++
Sbjct: 14 LIVITSTSPVTSVVYLITVFLLVAVYLVFNNIVYISLVLVIVYVGAIIVLILFVIIIINL 73
Query: 80 DIEVAEPRKKRGFLG---------------SFFIGILAAELIVCASNFMVFSAEGEL--- 121
G + IL + S +
Sbjct: 74 QDLRTTQNIAWSRWGASIIFIVIIINMDMAHWNADILPMFQYITISISKNAWSSNNWIVE 133
Query: 122 ----------SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+F + ++++G LYT + I+ F+ +LSM+G IV+ R
Sbjct: 134 NTTNMVFNSSDMNLFDLSQIQSLGLSLYTHSFIYIIIASFVFILSMVGPIVITSNKSR 191
>gi|268627911|gb|ACZ13378.1| NADH dehydrogenase subunit 6 [Lepidisis sp. B1d]
Length = 78
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 53/72 (73%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFVIVYVGAI 63
Query: 67 IVFFLFIIMMLD 78
+ FLF+IM++
Sbjct: 64 AILFLFVIMLIQ 75
>gi|404356|gb|AAB27397.1| orf100 [Marchantia polymorpha]
Length = 100
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 42/101 (41%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ FY+F +A++S L + +NP++SV I F N GL +LLG +F AM LVVYVGA
Sbjct: 2 ILFYVFIILALVSGALGIRAKNPVHSVVFFILVFFNTFGLLVLLGLDFFAMFFLVVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI 106
VF LF++MML I IE R FIG++
Sbjct: 62 --VFILFVVMMLHIRIEEIHENVLRYLPIGGFIGLIFFFYF 100
>gi|116662189|ref|YP_829244.1| hypothetical protein Arth_4494 [Arthrobacter sp. FB24]
gi|116612941|gb|ABK05663.1| NADH dehydrogenase subunit J [Arthrobacter sp. FB24]
Length = 204
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 67/168 (39%), Gaps = 4/168 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ ++ F + +A+ + V + + ++L +FV + L G +++ ++T+++
Sbjct: 1 MLTTVIFAALALIAVAAGIAVFRTDSMARATYALAVSFVAVGAMMLQFGLDYIGVVTILM 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
V + + +F++M + ++ + GS +L + +
Sbjct: 61 MVMEMAIMAIFMVMFMGMNPALMPMDMVHNKRGS----LLISSGVFAVLAAGALLVPWPA 116
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
R + ++G+ + + +L +++ A+VL R
Sbjct: 117 RRGAPAVDLTASLGEAIMGNKMLVMLTVSPVLFATLVSAVVLANPRGR 164
>gi|301353200|ref|YP_003795198.1| Nad6p [Candida subhashii]
gi|262410217|gb|ACY66210.1| Nad6p [Candida subhashii]
Length = 149
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
++ I+S +++ +PI+S+ S++ F+ AA L G + ++ +++YVGA+ + FLF
Sbjct: 3 TISGIASLMILADLSPIHSILSMLVLFITAALSLYLAGYHLMGILYVLIYVGAIAILFLF 62
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
I+ +L I + + ++A ++ + + +
Sbjct: 63 IVSLLKIKHLANTVKTSP-------LVVVALATVLIPFDLTLGERRVVEEAPSLAYQELS 115
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
++G LY A L ++G IL+LS+IGAI + R
Sbjct: 116 HVGTYLYCDSAIMLVVTGVILILSIIGAIAVTRR 149
>gi|73658456|emb|CAI99038.1| NADH dehydrogenase subunit 6 [Arabidopsis thaliana]
Length = 145
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 52/134 (38%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + ++ ++ +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSTDFNLWTIGNGITSLVCTTILFLLMSTILDTSWYGVIWT 126
Query: 123 RLVFKGNNVENIGK 136
+ + + I
Sbjct: 127 TKLNQILEQDLISN 140
>gi|73658454|emb|CAI99036.1| NADH dehydrogenase subunit 6 [Arabidopsis thaliana]
Length = 145
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 52/134 (38%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
+ ++ VV + NPI+S FSL F V + L++L + FVA L++Y
Sbjct: 7 IHDFLLVFLGAGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIY 66
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
VGA+ V +F +M ++ + G + ++ ++ +
Sbjct: 67 VGAINVLIIFAVMFMNDSEYSTDFNLWTIGNGITSLVCTTILFLLMSTILDTSWYGVIWT 126
Query: 123 RLVFKGNNVENIGK 136
+ + + I
Sbjct: 127 TKLNQILEQDLISN 140
>gi|268627916|gb|ACZ13382.1| NADH dehydrogenase subunit 6 [Keratoisis sp. D1a]
gi|268627918|gb|ACZ13384.1| NADH dehydrogenase subunit 6 [Keratoisis sp. D2d]
gi|268627919|gb|ACZ13385.1| NADH dehydrogenase subunit 6 [Lepidisis sp. D2e]
Length = 74
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 53/71 (74%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFVIVYVGAI 63
Query: 67 IVFFLFIIMML 77
+ FLF+IM++
Sbjct: 64 AILFLFVIMLI 74
>gi|301353313|ref|YP_003795385.1| NAD6 [Phakopsora pachyrhizi]
gi|251765326|gb|ACT15479.1| NAD6 [Phakopsora pachyrhizi]
Length = 189
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 73/176 (41%), Gaps = 25/176 (14%)
Query: 20 FLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDI 79
+V+T +P+ SV LI F+ A + +++++ ++VYVGA+IV LF+I+++++
Sbjct: 14 LIVITSTSPVTSVVYLITVFLLVAIYLVFNNIVYISLVLVIVYVGAIIVLILFVIIIINL 73
Query: 80 DIEVAEPRKKRGFL---------------GSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+ IL+ + S +
Sbjct: 74 QDLRTTQNIAWSRWVASIIFIVIIINTDMAHWNADILSMFQYITISISKNAWSSNNWITT 133
Query: 125 ----------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+F ++++++G LYT + ++ F+ +LSM+G IV+ R
Sbjct: 134 NMVFNPSDMNLFDLSHIQSLGLSLYTHSFIYIILASFVFILSMVGPIVITSNKSRG 189
>gi|60117148|ref|YP_209611.1| NADH dehydrogenase subunit 6 [Polysphondylium pallidum]
gi|51339712|gb|AAU00626.1| NADH dehydrogenase subunit 6 [Polysphondylium pallidum]
Length = 302
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 49/83 (59%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
NPIYSV +LI F A + ++L EF+A I ++V VGAV V FLFIIMM++I+I +
Sbjct: 25 NPIYSVLNLIIIFWCYACILIILDMEFLACIFILVNVGAVAVLFLFIIMMININIVEIKD 84
Query: 87 RKKRGFLGSFFIGILAAELIVCA 109
K+ + F+ + LI
Sbjct: 85 NLKKYYPFLIFLTLNVIGLISLI 107
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
Query: 109 ASNFMVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLM--- 164
A N + F + + ++++IG +LY + ++ ILL++M+G I +
Sbjct: 202 AINSIEFVQYENIYEKFIQTTDIKHIGSNLLYASNSIWFILACLILLVAMVGVIYITEEL 261
Query: 165 --LRHRRDIKRQDISKQLESNPDNSIVMVKVKSGK 197
R K QD+ +Q+ + +I VKS K
Sbjct: 262 LIKRKLEGNKSQDLFEQISKDYIGNIKFYDVKSTK 296
>gi|115523736|ref|YP_780647.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Rhodopseudomonas palustris BisA53]
gi|115517683|gb|ABJ05667.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Rhodopseudomonas palustris BisA53]
Length = 166
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 5/148 (3%)
Query: 23 VTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIE 82
VT N ++S+ L+ A + A F LGA F + ++VY GA++V F+F+ M + D
Sbjct: 21 VTRSNVMHSLLYLLAALLALAAAFFALGAGFAGALLIIVYAGAIVVLFVFVAMTVGTDDA 80
Query: 83 VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQY 142
E + + ++ G+ + + +G++L+ +
Sbjct: 81 AMERERDQLERSWPMPAAIS-----ILVAAPFLFGIGDPIPSHATPVSAQAVGRLLFGPW 135
Query: 143 AYPLEISGFILLLSMIGAIVLMLRHRRD 170
A+ +E++ F+LL +IG +
Sbjct: 136 AWAIELASFLLLAGLIGVRHIGRDRGEG 163
>gi|28972934|gb|AAM95267.1| NADH dehydrogenase subunit 6 [Pseudopterogorgia elisabethae]
gi|28972936|gb|AAM95268.1| NADH dehydrogenase subunit 6 [Pseudopterogorgia americana]
gi|28972938|gb|AAM95269.1| NADH dehydrogenase subunit 6 [Pseudopterogorgia bipinnata]
gi|28972940|gb|AAM95270.1| NADH dehydrogenase subunit 6 [Gorgonia ventalina]
gi|28972942|gb|AAM95271.1| NADH dehydrogenase subunit 6 [Gorgonia mariae]
gi|28972944|gb|AAM95272.1| NADH dehydrogenase subunit 6 [Gorgonia flabellum]
gi|28972952|gb|AAM95276.1| NADH dehydrogenase subunit 6 [Pseudopterogorgia acerosa]
Length = 120
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIGSR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD----------IKRQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPFLYNSHGESLRSRQDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|110667601|ref|YP_657412.1| NADH dehydrogenase subunit J [Haloquadratum walsbyi DSM 16790]
gi|109625348|emb|CAJ51771.1| NADH dehydrogenase, subunit J (ubiquinone) [Haloquadratum walsbyi
DSM 16790]
Length = 86
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 50/85 (58%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MV +++ F LF+ + + S VV +++ +S L A ++ A +++L AEF+A++ ++
Sbjct: 1 MVYETIAFVLFALVTVGCSLGVVLMQDVWHSALLLGGALLSVAVHYVMLQAEFLAVMQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAE 85
VYVG V++ F +M+ E +
Sbjct: 61 VYVGGVLILVTFAVMLTRTQPEGSN 85
>gi|4588017|gb|AAD25954.1|AF087657_1 NADH-ubiquinone oxidoreductase chain 6 [Agrocybe aegerita]
Length = 139
Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
+ SS + +T NPI S+ LI FV AA +L+G F+ + +V+YVGA+ V FLFII
Sbjct: 13 VLFSSVISITFSNPIISIIFLITTFVQAACYLILIGINFIGISYIVIYVGAIAVLFLFII 72
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
MM+ I + + + I + + ++ +L+
Sbjct: 73 MMIHIKLTDILDTGNNYTKNLPLGLTIVSLFIFVLFSILPYTYNNISFQLLPNF 126
>gi|28972932|gb|AAM95266.1| NADH dehydrogenase subunit 6 [Pacifigorgia stenobrochis]
Length = 120
Score = 47.7 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIGSR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD----------IKRQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPFLYNSHGESLRSRQDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|90425538|ref|YP_533908.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Rhodopseudomonas palustris BisB18]
gi|90107552|gb|ABD89589.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Rhodopseudomonas palustris BisB18]
Length = 155
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
MA+I++ L VT N ++++ L+ + A F L A F A++ ++VY GA+IV F+F+
Sbjct: 1 MALIAAALAVTRYNVVHALLYLLAMLLALAASFFALRAAFAAVLLIMVYAGAIIVLFVFV 60
Query: 74 IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVEN 133
+M + E + ++ GE + +
Sbjct: 61 VMAVGTSPEAIARERAMLRRSWPMPAAIS-----VLVAAPFLFGIGEQAPGNTAPIAAQA 115
Query: 134 IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+G++L+ +A+ +E++ F+LL +IG +
Sbjct: 116 VGRLLFGPWAWAIELASFLLLAGLIGVRHIGRDR 149
>gi|309773934|ref|NP_075423.2| ND6 protein [Yarrowia lipolytica]
gi|54036245|sp|Q9B6E9|NU6M_YARLI RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|12718792|emb|CAC28088.2| ND6 protein [Yarrowia lipolytica]
Length = 185
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F + F+AI+ + +++ +NP+ S+ +I FV AA L+G +++ ++
Sbjct: 2 MYLTYYFIEITIFLAILCTIFIISAKNPMVSILYMIALFVIAAMYLYLIGLGIFSLLYIM 61
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAEL--------------- 105
+Y+GA+ V FLFII +LDI+ + L I ++ +
Sbjct: 62 IYIGAIAVLFLFIITLLDINSTELSVKSNIRDLPLVLISLIVLTISGLMIYSNDSILINK 121
Query: 106 IVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
++ A + + + + IG VL T A+ L + +LLL +IG I + +
Sbjct: 122 LLEAFGNDYNTIITQDWFNIENTTLLTTIGNVLLTNNAFILLVLAIVLLLGIIGPISITM 181
Query: 166 RHRR 169
+H+
Sbjct: 182 KHKE 185
>gi|146304648|ref|YP_001191964.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Metallosphaera sedula DSM 5348]
gi|145702898|gb|ABP96040.1| NADH dehydrogenase subunit J [Metallosphaera sedula DSM 5348]
Length = 166
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 12/167 (7%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAE---FVAMITL 59
Q F+LFS A+ ++ +V +N YS SL F ++ A L L E + L
Sbjct: 8 FQIGIFFLFSIFALATALFIVNSKNVFYSAVSLAFLGISVAVLIADLDPEAYSLYSAFHL 67
Query: 60 VVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
++YVGA +VF ++M A L A ++ +
Sbjct: 68 LLYVGATVVFLSISLVMFRGLEVKEIRTPW---------APAMALLSAVAFFAVLVLSTS 118
Query: 120 ELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
++ + + N+ +G+ + +QY +P + LL +MI A+ L R
Sbjct: 119 SITPVQIQPLNLAVVGEKIVSQYWFPAVVLVIALLTTMIEALSLARR 165
>gi|28972930|gb|AAM95265.1| NADH dehydrogenase subunit 6 [Pacifigorgia elegans]
Length = 120
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIGSR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD----------IKRQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPFLYNSHGESLRSRQDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QVSRE 118
>gi|284990230|ref|YP_003408784.1| putative NADH dehydrogenase chain J [Geodermatophilus obscurus DSM
43160]
gi|284063475|gb|ADB74413.1| putative NADH dehydrogenase chain J [Geodermatophilus obscurus DSM
43160]
Length = 193
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 63/159 (39%), Gaps = 4/159 (2%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
+++++ V V + + F+L+ +F+ G+ + ++A +T ++ + V
Sbjct: 16 LGGLSVVAGIAVFVVDSMARATFALLASFLAVTGVLVAFDLPYLAFVTALMMTIEMAVMA 75
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNN 130
+F+IM + + GS +G ++ V++ + R ++
Sbjct: 76 VFMIMFMMNPAGLMPMTMVHNARGSAVLGAGVFAVLTVG----VWTIDWPTRRGELPADS 131
Query: 131 VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+G+ + + + + G L +++ VL R
Sbjct: 132 TMQLGEAIMGSHMLVMLVIGVGLFATIVSGTVLATARGR 170
>gi|126640818|ref|YP_001083802.1| NADH dehydrogenase I chain J [Acinetobacter baumannii ATCC 17978]
Length = 130
Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 47 LLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF-FIGILAAEL 105
+++GA F + ++VY GA++V F+F++MML++ E +K ++ + +++ L
Sbjct: 1 MIVGAPFAGALEIIVYAGAIMVLFVFVVMMLNLGQHTVEQERKWLSSDAWAYPALMSFLL 60
Query: 106 IVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + + L + + +G+ L+T Y +E++ +LL +++ A L
Sbjct: 61 GLLLVWMLGGEYTTISAPLGAQVIGPKVVGQALFTHYLLLVEVAAMLLLAALVAAYHLGK 120
Query: 166 RH 167
R
Sbjct: 121 RE 122
>gi|319790461|ref|YP_004152094.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermovibrio
ammonificans HB-1]
gi|317114963|gb|ADU97453.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Thermovibrio
ammonificans HB-1]
Length = 160
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+++F++ + + S+ + + + +++ S + A ++ L + + L VY G
Sbjct: 4 NVYFWIVYAVIVFSAIIALEASSLLWAAVSFVVLLSEIALVYFGLNMPVLGGVQLAVYAG 63
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
V + LF IMM+ + + + ++ +VFS +
Sbjct: 64 GVTILVLFAIMMIGESYKKPPGKAVKA----------IVLSLILLIIGIVFSFWSAIDTF 113
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
FK + E +G V +Y++ + GFI+ + A ++ + R
Sbjct: 114 PFKVYSTEALGTVFVEKYSFFTIVLGFIVAAILYMANAIITKKRE 158
>gi|167951306|ref|ZP_02538380.1| NADH dehydrogenase I chain J [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 44
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 155 LSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKSGK 197
+++I AI L +R R + K D S+Q+ + + MV++ + K
Sbjct: 1 MAIIAAIRLTMRKRPENKSIDPSQQVVVKRADRVRMVQMDAEK 43
>gi|28972946|gb|AAM95273.1| NADH dehydrogenase subunit 6 [Phyllogorgia dilatata]
Length = 120
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVDSQDYSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIGFR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD----------IKRQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPFLYNSHGESLRSRQDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|12895|emb|CAA31402.1| NADH dehydrogenase subunit 6 [Chlamydomonas reinhardtii]
Length = 137
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 5/140 (3%)
Query: 31 SVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKR 90
S+ + F+N++ + ++LG EF+A++ L+VYVGA+ V FLF+IM+L+I +
Sbjct: 2 SLMYSVMLFINSSFVLMMLGFEFLALVNLLVYVGALAVLFLFVIMLLEIPATELRAYSRG 61
Query: 91 GFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISG 150
F+ I+ + + ++ N+G LY +A L ++
Sbjct: 62 WSTLGIFVFIING-----VFQITPSMGPRGIITGLPGAESITNLGHALYLYFADLLILNS 116
Query: 151 FILLLSMIGAIVLMLRHRRD 170
+L +++ G +
Sbjct: 117 LVLTVALFGCAAIAPVRTTG 136
>gi|268627920|gb|ACZ13386.1| NADH dehydrogenase subunit 6 [Lepidisis sp. C1a]
Length = 71
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 50/68 (73%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFII 74
+ FLF+I
Sbjct: 64 AILFLFVI 71
>gi|312233378|ref|YP_004021588.1| Nad6p [Candida jiufengensis]
gi|268373365|gb|ACZ03937.1| Nad6p [Candida jiufengensis]
Length = 163
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 8/161 (4%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
++ I S +++ +P+ S+ +L+ FV+ A G + M +++YVGA+ + FLF
Sbjct: 3 LISGICSTTALSLLSPVQSIVALMALFVSVAISLYSSGYITMGMTYILMYVGAIAILFLF 62
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG--------ELSRL 124
I +L+I+ K+ + L + + S L
Sbjct: 63 ITSLLNIEYSYKGTFNKKMVYVLLMCLMPLDLLYETFDTVENMNFDIVENMNGMYSTSSL 122
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +G V YT+YA P I IL+LS++GAI +
Sbjct: 123 QNWDLELSTVGTVFYTEYAMPTMIMSLILVLSVMGAIAMTK 163
>gi|28972948|gb|AAM95274.1| NADH dehydrogenase subunit 6 [Leptogorgia virgulata]
Length = 120
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIGYR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD----------IKRQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + RQD+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPSSPFLYNSHGESLRSRQDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|268627914|gb|ACZ13380.1| NADH dehydrogenase subunit 6 [Lepidisis sp. B1b]
gi|268627915|gb|ACZ13381.1| NADH dehydrogenase subunit 6 [Lepidisis sp. B1a]
gi|268627917|gb|ACZ13383.1| NADH dehydrogenase subunit 6 [Keratoisis sp. D1a]
Length = 71
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 50/68 (73%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFVIVYVGAI 63
Query: 67 IVFFLFII 74
+ FLF+I
Sbjct: 64 AILFLFVI 71
>gi|268627910|gb|ACZ13377.1| NADH dehydrogenase subunit 6 [Lepidisis sp. B1b]
gi|268627913|gb|ACZ13379.1| NADH dehydrogenase subunit 6 [Keratoisis sp. B1c]
Length = 70
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/67 (44%), Positives = 49/67 (73%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFVIVYVGAI 63
Query: 67 IVFFLFI 73
+ FLF+
Sbjct: 64 AILFLFV 70
>gi|289809208|ref|ZP_06539837.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 69
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 24 TVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEV 83
NP++++ L+ + + +G+F LGA F + ++VY GA++V F+F++MML++
Sbjct: 6 LSTNPVHALLYLVISLLAISGVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSE 65
Query: 84 AEPR 87
E
Sbjct: 66 IEQE 69
>gi|38640868|ref|NP_943643.1| NADH dehydrogenase subunit 6 [Candida parapsilosis]
gi|1352588|sp|P48923|NU6M_CANPA RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|38564100|emb|CAE54605.1| NADH dehydrogenase subunit 6 [Candida parapsilosis]
gi|183229570|gb|ACC60284.1| Nad6p [Candida parapsilosis]
Length = 155
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 74/153 (48%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
++ ISS L + + +P+ S+ LI FV+AA G + ++ +++YVGA+ + FLF
Sbjct: 3 LISGISSILAIGLLSPVQSIVCLIVLFVSAAISLYSNGFVLMGILYVLIYVGAIAILFLF 62
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
I+ +L+I+ F I + + L+ +
Sbjct: 63 ILSLLNIEYNYKGTIHPLIFTILIICLIPLDLSYETYGIVENVNIAYPFNSLLDWDLELT 122
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+G +LYT+YA P+ + G IL+LS+IGAI +
Sbjct: 123 TVGSLLYTEYAIPMILIGLILILSVIGAIAITK 155
>gi|319947846|ref|ZP_08022034.1| hypothetical protein ES5_00922 [Dietzia cinnamea P4]
gi|319438491|gb|EFV93423.1| hypothetical protein ES5_00922 [Dietzia cinnamea P4]
Length = 187
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 74/185 (40%), Gaps = 7/185 (3%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F++ + +A+ + V V + + ++L +F+ + LLLG ++ +IT+++
Sbjct: 1 MLVGIVFWVLAVVAVTAGTAVFVVDSMARATYALAASFIAVGVMILLLGQSYLGIITILM 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
V + V ++++M + ++ + G I + +
Sbjct: 61 MVMEMAVMAVYMVMFMGMNPALMPMDMTHGKK----TAIGTSVGVFVLLAAGALLIPWPE 116
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLE 181
R + +G + + + + G +++ +++ IVL R + + L
Sbjct: 117 RRGAPPEDLANALGLEIMGEKMLVMAVVGAVMVATIVAGIVLAAGRTRYDR---LGDDLR 173
Query: 182 SNPDN 186
P +
Sbjct: 174 RRPAD 178
>gi|62736216|ref|YP_227575.1| NADH dehydrogenase subunit 6 [Candida orthopsilosis]
gi|62177728|gb|AAX73020.1| NADH dehydrogenase subunit 6 [Candida orthopsilosis]
gi|170785415|gb|ACB37772.1| NADH dehydrogenase subunit 6 [Candida orthopsilosis]
Length = 155
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 74/153 (48%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
++ ISS L + + +P+ S+ LI FV+AA G + ++ +++YVGA+ + FLF
Sbjct: 3 LISGISSILAIGLLSPVQSIVCLIVLFVSAAISLYSNGFVLMGILYVLIYVGAIAILFLF 62
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
I+ +L+I+ F I + + L+ +
Sbjct: 63 ILSLLNIEYNYKGTIHPLIFTILLICLIPLDLSYDTYGIVENVNIAYPFNGLLDWDLELS 122
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+G +LYT+YA P+ + G IL+LS+IGAI +
Sbjct: 123 TVGTLLYTEYAIPMILIGLILILSVIGAIAITK 155
>gi|13449337|ref|NP_085519.1| hypothetical protein ArthMp052 [Arabidopsis thaliana]
gi|15226112|ref|NP_178798.1| cytochrome b, putative [Arabidopsis thaliana]
gi|44888127|sp|P93314|M590_ARATH RecName: Full=Uncharacterized mitochondrial cytochrome b-like
protein AtMg00590; AltName: Full=ORF313
gi|1785720|emb|CAA69743.1| unnamed protein product [Arabidopsis thaliana]
gi|20198287|gb|AAM15503.1| hypothetical protein [Arabidopsis thaliana]
gi|110740159|dbj|BAF01978.1| hypothetical protein [Arabidopsis thaliana]
gi|330251007|gb|AEC06101.1| Cytochrome b/b6 protein [Arabidopsis thaliana]
Length = 313
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +V +N ++SV I F + LF + + ++ ++
Sbjct: 49 VLSSPALVSGLMVARAKNLVHSVLFPIPIFFSINQLF-----HYFCRLPIIKHLATKCQL 103
Query: 70 FLFII 74
LF+I
Sbjct: 104 LLFLI 108
>gi|268627909|gb|ACZ13376.1| NADH dehydrogenase subunit 6 [Isidella sp. I3b]
Length = 70
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 50/67 (74%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +SF+V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASFMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFFLFI 73
+ FLF+
Sbjct: 64 AILFLFV 70
>gi|86748480|ref|YP_484976.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Rhodopseudomonas palustris HaA2]
gi|86571508|gb|ABD06065.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Rhodopseudomonas palustris HaA2]
Length = 168
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M A++S+ + VT N ++++ L+ + A F LGA F A++ +++Y
Sbjct: 1 MSLWLAIYAGGFALVSAAIAVTRPNAVHALLYLVVMLLALAVAFFALGAAFAAVLLILIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA++V F+F++M L I E + G L L V +F G
Sbjct: 61 AGAIVVLFVFVVMTLPISPESITRER----AGLRGAWPLPLLLSVLILAPFLFGEFGIAG 116
Query: 123 RLVFKGNNVENIGKVLYTQY 142
+ + +G++L+ +
Sbjct: 117 NTAAAPVSAQQVGRLLFGPW 136
>gi|170289769|ref|YP_001736585.1| NADH dehydrogenase subunit J [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170173849|gb|ACB06902.1| NADH dehydrogenase subunit J [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 160
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F L S +A++SS L+V R+ +YS F L + + LF LLG +A+ LVVYVGA
Sbjct: 10 IIFLLSSALALVSSALIVFHRSIVYSAFFLSMLGIANSILFTLLGFPIIALFHLVVYVGA 69
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+ F LF ++M+ V + + ++ + + + F E
Sbjct: 70 AVTFILFSLVMMREAPTVEPGIRALAVASIVLMILVLSSIFMAPVGRPSFYLE------- 122
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
++ +L +Y L I+ L+ ++I AI L +
Sbjct: 123 -----FRSLTSLLIERYWLALLIATLALVTTLIEAITLARKE 159
>gi|242090093|ref|XP_002440879.1| hypothetical protein SORBIDRAFT_09g012611 [Sorghum bicolor]
gi|241946164|gb|EES19309.1| hypothetical protein SORBIDRAFT_09g012611 [Sorghum bicolor]
Length = 67
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S A++S +VV +NP++SV I F + +GL +LLG +F MI VV++GA+ V
Sbjct: 4 VLSSPALVSGLMVVRAKNPVHSVLFPILVFYDTSGLLILLGLDFSTMIFPVVHIGAIAVS 63
Query: 70 FLFI 73
FL +
Sbjct: 64 FLSL 67
>gi|322369191|ref|ZP_08043756.1| NADH dehydrogenase subunit J [Haladaptatus paucihalophilus DX253]
gi|320550923|gb|EFW92572.1| NADH dehydrogenase subunit J [Haladaptatus paucihalophilus DX253]
Length = 88
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F LF+ + + SS V VR+ +S L + ++ A +++L AEFVA + ++
Sbjct: 1 MAYEMIAFALFAILTVASSVGAVLVRDVWHSALLLGASLLSFAAHYVMLQAEFVAAMQIL 60
Query: 61 VYVGAVIVFFLFIIMMLDID 80
VYVG V++ F +M+
Sbjct: 61 VYVGGVLILITFAVMLTRRS 80
>gi|268627908|gb|ACZ13375.1| NADH dehydrogenase subunit 6 [Isidella sp. I1a]
Length = 70
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 50/67 (74%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +SF+V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASFMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAL 63
Query: 67 IVFFLFI 73
+ FLF+
Sbjct: 64 AILFLFV 70
>gi|15922549|ref|NP_378218.1| NADH-plastoquinone oxidoreductase subunit 6 [Sulfolobus tokodaii
str. 7]
gi|15623339|dbj|BAB67327.1| 165aa long hypothetical NADH-plastoquinone oxidoreductase subunit 6
[Sulfolobus tokodaii str. 7]
Length = 165
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 10/166 (6%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLG--AEFVAMITLV 60
Q FF F ++I S+ + +N Y+ LIF ++ A + L+ F + ++
Sbjct: 7 FQVSFFVFFGIISIASALFITRQKNVFYAAIGLIFLGISVAAMIALINFAYSFYSAFHIL 66
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+YVG+ +VF ++M + + I+A + V + +
Sbjct: 67 LYVGSTVVFLAISLVMF--------RGLNVKEVKISWAPIIALLVGVFVFIDIFATFSSI 118
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ +++ + + Y +P I LL +MI AI L R
Sbjct: 119 TPVSTLEVFSLQTLANEILQNYWFPALILIIALLTTMIEAISLARR 164
>gi|62736232|ref|YP_227560.1| NADH dehydrogenase subunit 6 [Candida metapsilosis]
gi|62177744|gb|AAX73035.1| NADH dehydrogenase subunit 6 [Candida metapsilosis]
gi|170779377|gb|ACB37041.1| NADH dehydrogenase subunit 6 [Candida metapsilosis]
Length = 155
Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 73/153 (47%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
++ ISS L + + +P+ S+ LI FV+AA G + ++ +++YVGA+ + FLF
Sbjct: 3 LISGISSILAIGLLSPVQSIVCLIVLFVSAAISLYSNGFVLMGILYVLIYVGAIAILFLF 62
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
I+ +L+I+ I + + L+ +
Sbjct: 63 ILSLLNIEYNYKGTIHPLILTILLICLIPLDLSYETYGIVENVNIAYPFNGLLDWDLELT 122
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+G +LYT+YA P+ + G IL+LS+IGAI +
Sbjct: 123 TVGSLLYTEYAIPMILIGLILILSVIGAIAITK 155
>gi|330834248|ref|YP_004408976.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Metallosphaera cuprina Ar-4]
gi|329566387|gb|AEB94492.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6
[Metallosphaera cuprina Ar-4]
Length = 154
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLG---AEFVAMITLVVYVGAV 66
LFS +A+ ++ +V +N YS SL F ++ A L + + L++YVGA
Sbjct: 2 LFSILALATALFIVNSKNVFYSAVSLAFLGISVAVLIADINPAAYSLYSAFHLILYVGAT 61
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+VF ++M + + + + LA + +V S
Sbjct: 62 VVFLSISLVMF--------RGLEVKEVKTPWAPSLAIVAAIAFFAVLVLSTSSITPSGTP 113
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLR 166
+ N+ +G+ L +QY +P I LL +MI A+ L R
Sbjct: 114 EQLNLAVVGEKLISQYWFPTFILIVALLTTMIEALSLARR 153
>gi|182434582|ref|YP_001822301.1| putative NADH dehydrogenase chain J [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326775107|ref|ZP_08234372.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
cf. griseus XylebKG-1]
gi|178463098|dbj|BAG17618.1| putative NADH dehydrogenase chain J [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326655440|gb|EGE40286.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Streptomyces
cf. griseus XylebKG-1]
Length = 186
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 54/140 (38%), Gaps = 4/140 (2%)
Query: 30 YSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKK 89
+ F L+ +F+ A + L+ G ++ + +++ + +++ +F+IM +
Sbjct: 28 RATFCLLASFIAVAVMILMTGLAYLGTVIILMMIIEMVIMAVFMIMYM----MNPAGLMP 83
Query: 90 RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEIS 149
+ L + L+ +F A+ R + +G+ L + +
Sbjct: 84 MSMFHNTRGAALISGLLFAGLTAGIFLADWPEKRGERPKDPTTALGETLMEGHMLTMMTL 143
Query: 150 GFILLLSMIGAIVLMLRHRR 169
G L +++ +VL R
Sbjct: 144 GVTLFSTIVATVVLATGRGR 163
>gi|48478478|ref|YP_024184.1| NADH dehydrogenase subunit J [Picrophilus torridus DSM 9790]
gi|48431126|gb|AAT43991.1| NADH-quinone oxidoreductase chain J [Picrophilus torridus DSM
9790]
Length = 84
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 47/81 (58%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F++F+ + +I SF+V++ + I+S L+ + +GLF+ LG FV + L+
Sbjct: 1 MSYYYIVFFIFAILLVILSFMVISSKKLIHSSIYLLIFLIIISGLFISLGLSFVGSVELL 60
Query: 61 VYVGAVIVFFLFIIMMLDIDI 81
VY GA++ +F +M+ +
Sbjct: 61 VYAGAIVTLLVFTLMLTGGED 81
>gi|28972914|gb|AAM95257.1| NADH dehydrogenase subunit 6 [Muricea pinnata]
Length = 120
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLILQPNKVDSQDHSHFLPVGLSVIFLFYSLLTNSPKYIS-------NPVIGSK 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK----------RQDISK 178
N+ IG LYT Y + I+ +LL++MIGAI+L + R D+
Sbjct: 54 TNIGAIGSHLYTTYYELVLIASLVLLVAMIGAILLAKQPNSPSLYNSHGKLLRSRXDLFL 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|118431450|ref|NP_147931.2| NuoJ-like protein [Aeropyrum pernix K1]
gi|116062774|dbj|BAA80415.2| NuoJ homolog [Aeropyrum pernix K1]
Length = 160
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 64/166 (38%), Gaps = 9/166 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+++ + +A + S VV R+ +YS +L ++ A + LLG VA+ ++V
Sbjct: 4 SLEAAVLIGVAGLATLFSMFVVRHRDMVYSSAALALVGLSTAAVVGLLGFPLVAVFLVIV 63
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
YVGA ++F + + ML + G+ AA + F
Sbjct: 64 YVGAAVMFIIVSVSMLGGGGREEWDEWR---------GLAAAAAAFSTVTLLGFIGGLWQ 114
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ N+E I VL + + L +++ I + R
Sbjct: 115 LYTPPQPVNLETIALVLTRDLYPVVIVLAAGLAATILEGIAIARRR 160
>gi|224373438|ref|YP_002607810.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Nautilia profundicola AmH]
gi|223589204|gb|ACM92940.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 superfamily
[Nautilia profundicola AmH]
Length = 155
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 37/80 (46%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L +A+I + + +T +N + +V + + ++L+ + + + + VY G ++V
Sbjct: 4 LILALAVILAVMSLTQKNTVPAVLAFVMMMFLLGIYYILMDEKLLGLFQIFVYTGGIVVL 63
Query: 70 FLFIIMMLDIDIEVAEPRKK 89
LF + ++ E R
Sbjct: 64 TLFGVTVIGAKFPKFEIRPW 83
>gi|256593092|gb|ACV03501.1| NADH dehydrogenase subunit 6 [Keratoisis sp. D3]
Length = 67
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 46/64 (71%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVGAI 63
Query: 67 IVFF 70
+ F
Sbjct: 64 AILF 67
>gi|255019947|ref|ZP_05292021.1| NADH-ubiquinone oxidoreductase chain J [Acidithiobacillus caldus
ATCC 51756]
gi|254970606|gb|EET28094.1| NADH-ubiquinone oxidoreductase chain J [Acidithiobacillus caldus
ATCC 51756]
Length = 166
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 28 PIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPR 87
P+ + A LFLLLGA FVA + +++Y+GA++V FLF IM+L D E
Sbjct: 25 PMRGAVLFGAVLLLLAVLFLLLGAPFVAALEVILYLGAILVLFLFAIMLLRPDPEEETGA 84
Query: 88 KKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ G L A + L + IG L+ + + +E
Sbjct: 85 RRFR----RGAGPALLLLCALALVLGLLFLPQTGPHLSAHPLGIAEIGAALFGPWLWLVE 140
Query: 148 ISGFILLLSMIGAIVLMLRHRRD 170
LL ++IGA++ + + D
Sbjct: 141 ALAV-LLFAVIGAVLAIHQGGDD 162
>gi|70608046|ref|YP_256916.1| hypothetical protein Saci_2341 [Sulfolobus acidocaldarius DSM 639]
gi|68568694|gb|AAY81623.1| conserved protein [Sulfolobus acidocaldarius DSM 639]
Length = 168
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 4/166 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
Q F LFS AI SS L+V +N YS +L V+ A + LL +
Sbjct: 7 FQLAFLLLFSVFAIASSLLIVRQKNVFYSAVALGLLGVSVAVIIALLN----PIAYSFYS 62
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+I++ I+ L + + V + + ++ + +V F++ E +
Sbjct: 63 ALHLILYVGSAIVFLSVSLVVFRGLEVKERRVAWASILGFITALVVFFAFILTFVENTPT 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
L + + L + Y +P+ I L ++I A+ L +
Sbjct: 123 PLQAQVFTLSTFANTLLSDYWFPILILVIALATTLIEALSLARGGK 168
>gi|116515046|ref|YP_802675.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|116256900|gb|ABJ90582.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 161
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++ F+LFSF+A+ S L++ N IYS+ LI + A +F +LG F+ ++ +++Y G
Sbjct: 2 AISFWLFSFLAVFFSILIMISINLIYSLIYLILLIFSIASIFCVLGLSFIGVLEVIIYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A+ V F+ I +++ +F + LI F + +
Sbjct: 62 AITVLFILIAILMRPKRFSRNFFFNNLKNFFYFSSLFFTILIFFI--FFIQINSNKDKFF 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLE 147
+K +++I L+ +Y + +E
Sbjct: 120 FYKKFLIQDICLCLFNKYLFLIE 142
>gi|310915125|emb|CBM41834.1| NADH dehydrogenase subunit 6 [Millerozyma farinosa]
Length = 153
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
++ +SS L + + P+ S+ LI F + A G + M+ +++YVGA+ + FLF
Sbjct: 3 LISGLSSLLAMGMLTPVQSILCLIILFTSTAMCLYSQGFVLMGMLYMLMYVGAMAMLFLF 62
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
++ +L +D + L + + L + S + V
Sbjct: 63 MLSLLKMDAPSPKGYHHVSPLLLTLMIVTLMPLDLLYSGMETSYGMMVEVENTYNELVV- 121
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+G LYT+YA L ++G +L+LS++GAI +
Sbjct: 122 -VGNQLYTEYAMLLVMTGLMLMLSVMGAISMTK 153
>gi|73670843|ref|YP_306858.1| F420H2 dehydrogenase subunit [Methanosarcina barkeri str. Fusaro]
gi|72398005|gb|AAZ72278.1| F420H2 dehydrogenase subunit [Methanosarcina barkeri str. Fusaro]
Length = 83
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 88 KKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
+ +F + +L ++V + ++ EL + +N+E IG +++TQY P E
Sbjct: 1 MRINRPLAFLVVLLFTAIVVIGAFGTSWNTVSELPQSPADQSNIEGIGMLIFTQYVAPFE 60
Query: 148 ISGFILLLSMIGAIVLML 165
+ +LL S+IGAI L
Sbjct: 61 VLSIVLLASLIGAIYLAK 78
>gi|327309906|ref|YP_004336804.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Pseudonocardia dioxanivorans CB1190]
gi|326955241|gb|AEA28937.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Pseudonocardia dioxanivorans CB1190]
Length = 185
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 66/165 (40%), Gaps = 4/165 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F++ + A++ F V + + FSL+ +F+ AGL +LLG ++ ++ +++ V
Sbjct: 2 DVVFWVLALAAVMFGFGVFRLNSMAQVTFSLLASFLAVAGLVVLLGLGYLGVVIVLMMVI 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+++ +F+IM + + G+ I + L+ + +
Sbjct: 62 EMVIMAVFMIMYMMNPAGLMPMAMYHNKPGAMTISVGTFVLLAAGILLVDWPQRTGTPAP 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+G+ L + G L +++ +VL R
Sbjct: 122 DPTF----ALGRSLMGEQMLTTMTLGITLFATIVATVVLSTGRGR 162
>gi|256593090|gb|ACV03500.1| NADH dehydrogenase subunit 6 [Keratoisis cf. flabellum SCF-2009]
Length = 65
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 45/62 (72%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +FS + +S +V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVGA+
Sbjct: 4 LFMIFSLGIVGASLMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFVIVYVGAI 63
Query: 67 IV 68
+
Sbjct: 64 AI 65
>gi|262211481|gb|ACY35570.1| NADH dehydrogenase subunit 6 [Polytomella sp. SAG 63-10]
Length = 145
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 13/157 (8%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
L Y+ ++ + VV +P ++ I ++N + LG +F+A+I +VYVGA
Sbjct: 2 LLIYIMLSNIVVLALSVVLTSSPFMALMYSILLYLNVQTILWSLGYDFMALIYALVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+ V FLF++MM+ I + + + L I + FS +
Sbjct: 62 LAVLFLFVVMMVRIQVSTLSTKTVQAVLSWLAI-------------MLFFSYDNANYSFP 108
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIV 162
++ N G LY+ + ++ L +++ G++V
Sbjct: 109 CAAESLLNFGTCLYSSCSDLTLLNSLALTIALFGSLV 145
>gi|20090361|ref|NP_616436.1| F(420)H(2) dehydrogenase, subunit FpoJ [Methanosarcina acetivorans
C2A]
gi|19915366|gb|AAM04916.1| F(420)H(2) dehydrogenase, subunit FpoJ [Methanosarcina acetivorans
C2A]
Length = 86
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 89 KRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEI 148
+ + + +L +IV + EL +N++ IG +++TQY P E+
Sbjct: 5 RINRPLALLVSLLFVAVIVTGVFGTSWHTVSELPENPADPSNIQGIGMLIFTQYVVPFEV 64
Query: 149 SGFILLLSMIGAIVLML 165
+LL S+IGAI +
Sbjct: 65 LSIVLLASLIGAIYMAK 81
>gi|21672445|ref|NP_660512.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25008867|sp|Q8K9X9|NUOJ_BUCAP RecName: Full=NADH-quinone oxidoreductase subunit J; AltName:
Full=NADH dehydrogenase I subunit J; AltName: Full=NDH-1
subunit J
gi|21623058|gb|AAM67723.1| NADH dehydrogenase I chain J [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 163
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 74/138 (53%), Gaps = 2/138 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
FY S +A+IS+ LV+ +N +YS+ LI + ++ +G+F + GA F + +V+Y G
Sbjct: 2 EFVFYACSLIAVISTLLVIIQKNAVYSLLYLIISLLSISGIFFIFGAFFAGALEVVIYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
A+IV F+F+IMML++ + KK + + ++ + +F + + ++
Sbjct: 62 AIIVLFVFVIMMLNLGKKNDLQEKKYLNPIFWIGPSFLSLILFLLMTYAIFFVKDK--QI 119
Query: 125 VFKGNNVENIGKVLYTQY 142
F +V+ +G L+ Y
Sbjct: 120 YFSLIDVKEVGINLFGPY 137
>gi|118581619|ref|YP_902869.1| putative monovalent cation/H+ antiporter subunit A [Pelobacter
propionicus DSM 2379]
gi|118504329|gb|ABL00812.1| multisubunit sodium/proton antiporter, MrpA subunit [Pelobacter
propionicus DSM 2379]
Length = 767
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 50/113 (44%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+L + + + + + T R+ + +V +L A ++++ GA +AM + ++I+
Sbjct: 602 WLTAAVILGGALMAATTRSRLAAVAALGTVGYGVALIYIIFGAPDLAMTQFCIETLSIIM 661
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
F L + + + + R L S IG L++ A + +F G+
Sbjct: 662 FVLVLYRLPRFTPLSSPLSRLRDLLVSLSIGCAMGLLVLMAVSRPMFPHIGDW 714
>gi|229822296|ref|YP_002883822.1| NADH dehydrogenase (quinone) [Beutenbergia cavernae DSM 12333]
gi|229568209|gb|ACQ82060.1| NADH dehydrogenase (quinone) [Beutenbergia cavernae DSM 12333]
Length = 999
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 11/170 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + I+ + L R + +V L A LF L GA +A+ ++V I
Sbjct: 596 VVGVIVILGAILAARSRRRMKAVLLLGACGYGVAVLFELQGAPDLALTQVLV---ETITL 652
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
+F++++ + + +G+L ++ +A E V+
Sbjct: 653 VVFVLVLRRLPPYFSNRPLAASRWWRAALGVLVGA-FFAFLALIIPTARIEAPISVYFPA 711
Query: 130 NVENIGKVLYTQYAYPLEISG-------FILLLSMIGAIVLMLRHRRDIK 172
G ++I +LL++ G L+ R R +
Sbjct: 712 EAYEYGYGKNIVNVTLVDIRAWDTMGEISVLLVAATGVASLVFRRLRGGR 761
>gi|294507715|ref|YP_003571773.1| Na(+)/H(+) antiporter subunit A [Salinibacter ruber M8]
gi|294344043|emb|CBH24821.1| Na(+)/H(+) antiporter subunit A [Salinibacter ruber M8]
Length = 794
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 51/113 (45%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ + ++++ +F + R+ I + SL + + A LFL GA +A ++ VI+
Sbjct: 604 WVLAILSVVGAFGTLFFRSRIGLITSLGVSGFSIALLFLAFGAPDLAKTQFLIETLTVIL 663
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
L + + D+ + +K + +G++ + LI+ + G+
Sbjct: 664 VVLILTAVSDVKETLTMGQKVTNGAVAAGMGVVVSGLILAVLKLPFENPMGDY 716
>gi|83816417|ref|YP_445814.1| putative monovalent cation/H+ antiporter subunit A [Salinibacter
ruber DSM 13855]
gi|83757811|gb|ABC45924.1| NADH dehydrogenase, putative [Salinibacter ruber DSM 13855]
Length = 794
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 51/113 (45%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ + ++++ +F + R+ I + SL + + A LFL GA +A ++ VI+
Sbjct: 604 WVLAILSVVGAFGTLFFRSRIGLITSLGVSGFSIALLFLAFGAPDLAKTQFLIETLTVIL 663
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
L + + D+ + +K + +G++ + LI+ + G+
Sbjct: 664 VVLILTAVSDVKETLTMGQKVTNGAVAAGMGVVVSGLILAVLKLPFENPMGDY 716
>gi|325295369|ref|YP_004281883.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065817|gb|ADY73824.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Desulfurobacterium thermolithotrophum DSM 11699]
Length = 158
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 68/165 (41%), Gaps = 10/165 (6%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S++F++ + IIS+ + + + +++ + + A ++ + + + L +Y G
Sbjct: 2 SIYFWIIYAVIIISAIVALEATSLLWAAIAFVVLLSEIALVYFGIEMPVLGGVQLAIYAG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
V + LF IMM+ + + + + S I IL + +
Sbjct: 62 GVTILVLFAIMMIGESYKKPQSKAVGAKVLSLIILILGTAVSFF----------SAIDTF 111
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
++ + +G V +Y++ I GFI+ + A ++ + R
Sbjct: 112 SYRIYPTQVLGTVFVEKYSFFTIILGFIVSAILYMANAIISKKRE 156
>gi|238550362|gb|ACR44284.1| NADH dehydrogenase subunit 6 [Melampsora aecidioides]
Length = 159
Score = 42.7 bits (99), Expect = 0.032, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
V+T +P+ SV LI F+ A +L +++++ ++VYVGA+IV LF+I+++++
Sbjct: 2 VITSTSPVTSVVYLITVFLLVAAYLVLQNIVYLSLVLVIVYVGAIIVLILFVIIIINLQD 61
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
G + + + + +F
Sbjct: 62 IRTTQNIPWSLQGIASLMFIVIFINIDVVHF 92
>gi|134153039|gb|ABO64354.1| unknown [Brassica juncea var. tumida]
Length = 256
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 11/101 (10%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLF-----------LLLGAEFVAMIT 58
+ S A++S +V +NP++SV I F + +F + F+
Sbjct: 5 VLSSPALVSGLMVARAKNPVHSVLFPIPVFRDIETVFTYFSSFPIIRKFSMKWRFLWFSI 64
Query: 59 LVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG 99
++V F+F + L D + + F G
Sbjct: 65 FKFIFAIIMVKFVFSVGYLCFDDLTRAISQFYPPISGFLGG 105
>gi|49146207|ref|YP_025987.1| NADH dehydrogenase subunit 6 [Anseranas semipalmata]
gi|37960693|gb|AAP47792.1| NADH dehydrogenase subunit 6 [Anseranas semipalmata]
Length = 173
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + S ++ + V + +P Y V L+ A V G L LGA FV++ +VY+G
Sbjct: 2 TYFVFFLSVCFVLGALGVASNPSPYYGVVGLVLASVAGCGWLLSLGASFVSLALFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A G+ + ++ A ++ + +
Sbjct: 62 GMLVVFVYSVSLAAEPFPEAWGDWGVMGYGAGLVSVVFAGVVFGGFVESWKAGVFTVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ Y ++G+ LLL++ + L+ R R
Sbjct: 122 GESLVRLDFSGVAVFYSYGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|309322022|ref|YP_003935010.1| NADH dehydrogenase subunit 6 [Candida alai]
gi|308746499|gb|ADO51034.1| NADH dehydrogenase subunit 6 [Candida alai]
Length = 148
Score = 42.3 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
S ++ I+S L + + +PI S+ LI F + A + G + ++ +++YVGA+ + FL
Sbjct: 2 SIISGIASLLAIGILSPIQSILCLIIIFTSTAIYLYINGFILMGILYILIYVGAIAILFL 61
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
FI+ +L+I + G+ + + +I+ + E N +
Sbjct: 62 FIVSLLNI-------EYTKLIEGNVPLILSILIIILIPLDLTSNINIIENIDYNNIYNEL 114
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+G +LYT YA+ L I IL+LS+IGAI++
Sbjct: 115 NTVGSLLYTDYAFILIILSIILVLSVIGAIIITR 148
>gi|259019202|ref|YP_003204919.1| NADH dehydrogenase subunit 6 [Millerozyma farinosa]
gi|257143763|emb|CAY39289.1| NADH dehydrogenase, subunit 6 [Millerozyma farinosa]
Length = 146
Score = 41.9 bits (97), Expect = 0.044, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 9/153 (5%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
++ +SS L + + P+ S+ LI FV+ A G + ++ +++YVGA+ + FLF
Sbjct: 3 LISGMSSLLALGMLTPVQSITCLIVTFVSTAMSTYSEGFILMGILYVLIYVGAIAILFLF 62
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
I+ +L+I+ GS I+ L+ + + G + +
Sbjct: 63 ILSLLNIE---------YKPQGSMKPIIVTILLVSLIPLDLSYETYGITTEFNTINEELW 113
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+G YT+YA L ++G IL++S++GAI +
Sbjct: 114 VVGVQFYTEYAILLLMTGLILMMSVMGAISITK 146
>gi|256593063|gb|ACV03486.1| NADH dehydrogenase subunit 6 [Isidella sp. I2a]
gi|256593066|gb|ACV03488.1| NADH dehydrogenase subunit 6 [Isidella tentaculum]
Length = 61
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 43/58 (74%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
F +FS + +SF+V++ NP+YSVF L+ AFVNAA +F+ LG +++ +I ++VYVG
Sbjct: 4 LFMIFSLGIVGASFMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGLIFIIVYVG 61
>gi|238550360|gb|ACR44283.1| NADH dehydrogenase subunit 6 [Melampsora populnea f. sp. laricis]
Length = 166
Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
V+T +P+ SV LI F+ A +L +++++ ++VYVGA+IV LF+I+++++
Sbjct: 2 VITSTSPVTSVVYLITVFLLVAAYLVLQNIVYLSLVLVIVYVGAIIVLILFVIIIINLQD 61
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
G + + + + +F
Sbjct: 62 MRTTQNIPWSLQGIASLMFIVIFINIDVVHF 92
>gi|256427272|ref|YP_003127037.1| Nad6p [Brettanomyces custersianus]
gi|255761583|gb|ACU32820.1| Nad6p [Brettanomyces custersianus]
Length = 168
Score = 41.5 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Query: 35 LIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG 94
LI + ++ A++ ++YVGAV++ F+FI+ +L+ E +
Sbjct: 30 LIGTIIPVITELWFNSSQLFAILYTLIYVGAVVILFVFILSVLNKKEEYEYQYSSLLLIL 89
Query: 95 SFFIGILAAELIVCASNFMVFSAEGELSRL-VFKGNNVENIGKVLYTQYAYPLEISGFIL 153
N + + L + +++ IG +L+T+Y++ L I L
Sbjct: 90 IILFLDDLDYNDSGDYNLNNVNIFDNFNLLNITNNSDLATIGNLLFTEYSFLLVIIAVTL 149
Query: 154 LLSMIGAIVLMLRHRRDIK 172
LLS+IG IV++ R++ K
Sbjct: 150 LLSIIGIIVIVKRNKSLAK 168
>gi|213965057|ref|ZP_03393255.1| NADH ubiquinone oxidoreductase subunit 5 [Corynebacterium
amycolatum SK46]
gi|213952171|gb|EEB63555.1| NADH ubiquinone oxidoreductase subunit 5 [Corynebacterium
amycolatum SK46]
Length = 1061
Score = 41.5 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 63/178 (35%), Gaps = 6/178 (3%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
+ + II++ +N + V + A +F + GA +A+ L+V ++IVF
Sbjct: 642 VALIMIIAALAATQQKNRLSGVILVGVTGYGLAIIFAMYGAPDLALTQLLVETVSMIVFV 701
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGI-LAAELIVCASNFMVFSAEGELSRLVFKGN 129
L + + + + +G+ + + G++ L
Sbjct: 702 LVLRTLSPRAPASNPRWIRHRAWLAIAVGVTVPVLAAYAMGSRRTEPISGDIPPLAHDIG 761
Query: 130 NVENIGKVLYTQ---YAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNP 184
+ +N VL + EI+ +L++ +G L+ R R I Q
Sbjct: 762 HGQNAVNVLLVDIRAWDTFGEIT--VLVMVALGITSLVFRTHTMHMRSKIKPQRNRAR 817
>gi|156937934|ref|YP_001435730.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Ignicoccus
hospitalis KIN4/I]
gi|156566918|gb|ABU82323.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Ignicoccus
hospitalis KIN4/I]
Length = 160
Score = 41.5 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 10/159 (6%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F L +A + V+ + + + SL+ F+ L LGA FV + +++ GAV
Sbjct: 3 AFVLLMGLATAFAAAVLWDPDIVRAASSLVMVFLLTGFALLSLGAWFVGAMQVLLGAGAV 62
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ L+ + EV R G +AA + M F F
Sbjct: 63 AILALYAAITSKKRKEVLRSRS---------AGTIAALALSVLGISMGFLTLNTPGTFTF 113
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
++ I +VL+ + + +L++++I + ++
Sbjct: 114 YSSDASKIAEVLFEDVGLTVAL-SVLLIVALIASAYIVR 151
>gi|238550366|gb|ACR44286.1| NADH dehydrogenase subunit 6 [Melampsora abietis-canadensis]
gi|238550368|gb|ACR44287.1| NADH dehydrogenase subunit 6 [Melampsora abietis-canadensis]
gi|238550370|gb|ACR44288.1| NADH dehydrogenase subunit 6 [Melampsora medusae f. sp.
tremuloidis]
gi|238550372|gb|ACR44289.1| NADH dehydrogenase subunit 6 [Melampsora medusae f. sp.
tremuloidis]
gi|238550374|gb|ACR44290.1| NADH dehydrogenase subunit 6 [Melampsora medusae f. sp.
tremuloidis]
gi|238550376|gb|ACR44291.1| NADH dehydrogenase subunit 6 [Melampsora medusae f. sp.
tremuloidis]
gi|238550384|gb|ACR44295.1| NADH dehydrogenase subunit 6 [Melampsora populnea f. sp.
pinitorqua]
gi|238550386|gb|ACR44296.1| NADH dehydrogenase subunit 6 [Melampsora populnea f. sp.
pinitorqua]
gi|238550388|gb|ACR44297.1| NADH dehydrogenase subunit 6 [Melampsora populnea f. sp.
pinitorqua]
Length = 166
Score = 41.5 bits (96), Expect = 0.070, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
V+T +P+ SV LI F+ A +L +++++ ++VYVGA+IV LF+I+++++
Sbjct: 2 VITSTSPVTSVVYLITVFLLVAAYLVLQNIVYLSLVLVIVYVGAIIVLILFVIIIINLQD 61
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
G + + + + +F
Sbjct: 62 IRTTQNIPWSLQGIASLMFIVIFINIDVVHF 92
>gi|238550364|gb|ACR44285.1| NADH dehydrogenase subunit 6 [Melampsora aecidioides]
gi|238550378|gb|ACR44292.1| NADH dehydrogenase subunit 6 [Melampsora aecidioides]
gi|238550380|gb|ACR44293.1| NADH dehydrogenase subunit 6 [Melampsora aecidioides]
gi|238550382|gb|ACR44294.1| NADH dehydrogenase subunit 6 [Melampsora aecidioides]
Length = 166
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 46/91 (50%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
V+T +P+ SV LI F+ A +L +++++ ++VYVGA+IV LF+I+++++
Sbjct: 2 VITSTSPVTSVVYLITVFLLVAAYLVLQNIVYLSLVLVIVYVGAIIVLILFVIIIINLQD 61
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
G + + + + +F
Sbjct: 62 IRTTQNIPWSLQGIASLMFIVIFINIDVVHF 92
>gi|21689547|gb|AAL65277.1| NADH dehydrogenase subunit 6 [Polytomella parva]
Length = 145
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 35/157 (22%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
L Y+ ++ + VV +P ++ I ++N + LG +F+A+I +VYVGA
Sbjct: 2 LLIYIMLSNIVVLALSVVLTSSPFMALMYSILLYLNVQTILWSLGYDFMALIYALVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+ V FLF++MM+ I + + + L I ++ + V S
Sbjct: 62 LAVLFLFVVMMVRIQVSTLSTKTIQSVLSWLAIILIFSYGDVSFS-------------FP 108
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIV 162
++ N G LY+ + ++ L +++ G++V
Sbjct: 109 CGAESLLNFGTQLYSSCSDLTLLNSLALTIALFGSLV 145
>gi|296164199|ref|ZP_06846796.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295900447|gb|EFG79856.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 187
Score = 41.2 bits (95), Expect = 0.087, Method: Composition-based stats.
Identities = 20/168 (11%), Positives = 70/168 (41%), Gaps = 4/168 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + +++ + +A+++ V V + + ++L +FV + L+L ++ ++T+++
Sbjct: 1 MIVDVVYWICAVIAVLAGAAVFRVTSMARATYALAVSFVAVGVVVLVLAQNYIGVVTILM 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
V + V ++++M + ++ + + + + +
Sbjct: 61 MVMEMAVMAVYMVMFMGMNPALMPMSMVHDKRRALAAAVGT----FVLLASGILVVDWPS 116
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
R + ++G+ L + + I++ +++ IVL + R
Sbjct: 117 RRGAPPPDVTASLGQELMGPKMLAMAVISPIMVATIVAGIVLAAKRSR 164
>gi|195996941|ref|XP_002108339.1| hypothetical protein TRIADDRAFT_52711 [Trichoplax adhaerens]
gi|190589115|gb|EDV29137.1| hypothetical protein TRIADDRAFT_52711 [Trichoplax adhaerens]
Length = 1296
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 17/178 (9%), Positives = 48/178 (26%), Gaps = 8/178 (4%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + + S ++ S+ + + AG++ LL + + + +
Sbjct: 121 FIASILLMSSFLMLALATRDSPSLLFPALSLCSTAGMYFLLSLFQIGNLFKTKRSTVISI 180
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
D + + +G + + + ++
Sbjct: 181 INGS----FDASAAIFLFFQLIYDVGISRSTLFLIWTALSFITVINTIVFIPAKPILPPD 236
Query: 129 NNVENIGKVLYTQYAYPL---EISGFILLLSMIGAI-VLMLRHRRDIKRQDISKQLES 182
+I + Y Y E+ LL I + + +R + +
Sbjct: 237 AEYNSITSGILGNYYYIFHALEVVNVSLLGIHSKTINHMNKPSQNVSRRSRLFDSVSV 294
>gi|149195036|ref|ZP_01872128.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Caminibacter
mediatlanticus TB-2]
gi|149134749|gb|EDM23233.1| NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 [Caminibacter
mediatlanticus TB-2]
Length = 155
Score = 41.2 bits (95), Expect = 0.089, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 48/129 (37%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L +AII + + +T +N + +V + + ++ LG + + + + VY G ++V
Sbjct: 4 LILVIAIILAVMSLTQKNTVGAVIAFVMMMFLLGIYYIFLGEKLLGLFQIFVYTGGIVVL 63
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
LF + ++ + R + + + L + V ++ +
Sbjct: 64 TLFGVTVIGAKFPEFKIRPWAISIVTVILIGLMIIPFLLPEIPYVGKMIPLKEQVKIFTD 123
Query: 130 NVENIGKVL 138
I +
Sbjct: 124 FYGEIAIFM 132
>gi|159036368|ref|YP_001535621.1| hypothetical protein Sare_0711 [Salinispora arenicola CNS-205]
gi|157915203|gb|ABV96630.1| conserved hypothetical protein [Salinispora arenicola CNS-205]
Length = 187
Score = 40.8 bits (94), Expect = 0.099, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 68/168 (40%), Gaps = 4/168 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F+ + +A+++ V V + + +SL +F+ +LL +V ++ +++
Sbjct: 1 MVTHVVFWALAVVAVLAGAAVFVVDSMARASYSLAVSFIVVGLQVMLLQQRYVGVLIILM 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
V + + +++ M + ++ + G + + + L+ + F
Sbjct: 61 MVMEMAIMAVYMNMFMGMNPALMSMNMVHGTRHALPVSVGVFVLLAAGALFA----PWPS 116
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
R + +G L + G ++ ++++G +VL R
Sbjct: 117 RRGSPPDDVTAALGTELMGPKMLTMAAVGVVMAVTIVGGVVLAAHRTR 164
>gi|294496242|ref|YP_003542735.1| hypothetical protein Mmah_1594 [Methanohalophilus mahii DSM 5219]
gi|292667241|gb|ADE37090.1| hypothetical protein Mmah_1594 [Methanohalophilus mahii DSM 5219]
Length = 117
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 36/68 (52%)
Query: 98 IGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSM 157
I L +++ + ++ +L + + +N++ IG +++T + P E+ +LL S+
Sbjct: 45 IVGLFLAVVLVSLYGTSWTTVDQLPQNMEDQSNIKAIGTLIFTDFVVPFEVLSIVLLSSL 104
Query: 158 IGAIVLML 165
+GAI +
Sbjct: 105 MGAIYMAK 112
>gi|21228586|ref|NP_634508.1| F420H2 dehydrogenase subunit [Methanosarcina mazei Go1]
gi|20907080|gb|AAM32180.1| F420H2 dehydrogenase subunit [Methanosarcina mazei Go1]
Length = 83
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 88 KKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
+ +F + +L ++V + ++ EL +N+E IG +++T + P E
Sbjct: 1 MQINRPLAFLVCLLFVAVVVTGAFGTSWNTVSELPENPADPSNIEGIGMLIFTHFVAPFE 60
Query: 148 ISGFILLLSMIGAIVLML 165
+ +LL S+IGAI +
Sbjct: 61 VLSIVLLASLIGAIYMAK 78
>gi|152992443|ref|YP_001358164.1| NADH-quinone oxidoreductase, chain J [Sulfurovum sp. NBC37-1]
gi|151424304|dbj|BAF71807.1| NADH-quinone oxidoreductase, chain J [Sulfurovum sp. NBC37-1]
Length = 157
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 54/152 (35%), Gaps = 9/152 (5%)
Query: 19 SFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLD 78
+ + ++ + ++ S ++ L A+ + + + VY G ++V LF + ++
Sbjct: 13 AAASLMIKKSVPAMISFALMMFLLGIYYVTLDAKLLGLFQIFVYAGGIVVLMLFGVTIIG 72
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVL 138
++ A R ++A L+ + F A L ++ + ++
Sbjct: 73 VEFPKAASRPW---------AAVSAFLVFVLLTVLFFRAVDTLKKVAGQPTEKVDLFAHS 123
Query: 139 YTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
++ + G LL I + R
Sbjct: 124 FSDMVILFALIGASLLYGTIKMTGQLKSKRSK 155
>gi|224476050|ref|YP_002633656.1| monovalent cation/H+ antiporter subunit A [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420657|emb|CAL27471.1| putative Na+/H+ antiporter subunit [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 805
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 48/128 (37%), Gaps = 4/128 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ M + S+F++V R+ ++S+ L + A F+ A +A+ VV + +
Sbjct: 626 IIIVIMILASAFMIVFARSRLFSIIMLSAVGYSMAIFFIFFNAPDLALTQFVVETISTAL 685
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F L + +++ F + ++V + + + S +
Sbjct: 686 FLLCFYHLPNLNRYNESKS----FKVGNALIAAGVGIVVTVLGLIAYGNKHFESIASYYK 741
Query: 129 NNVENIGK 136
NV ++
Sbjct: 742 ENVHSLAH 749
>gi|117165272|emb|CAJ88834.1| putative NADH dehydrogenase I complex, subunit [Streptomyces
ambofaciens ATCC 23877]
Length = 971
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 59/161 (36%), Gaps = 2/161 (1%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
+ + ++ L + VR + +V A LF+ GA +A+ V ++IVF
Sbjct: 598 VAVLTCAAALLCMGVRRRMKAVVLAGLTGYGTALLFVTQGAPDLALTQFCVETVSMIVFV 657
Query: 71 LFI-IMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG-ELSRLVFKG 128
L + M + + + R+ + G A ++ + + G +
Sbjct: 658 LVLRRMPVHFEENYSRWRRLLRMPVALAGGACVALVVWIMAGHRRADSAGAAMVEETAHH 717
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + +L A+ +L + IG L+ HRR
Sbjct: 718 GLKDVVATILVDLRAWDTMGESAVLAAAAIGVTSLIYLHRR 758
>gi|13541941|ref|NP_111629.1| NADH dehydrogenase subunit J [Thermoplasma volcanium GSS1]
gi|14325372|dbj|BAB60276.1| NADH dehydrogenase I chain G [Thermoplasma volcanium GSS1]
Length = 82
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ +L F + + I S L V +N +S L A FL LGA FVA + ++V
Sbjct: 1 MIYTLIFSIIAVFLIAFSVLSVKEKNITHSAIYLFLFLFILAAEFLFLGASFVAAVEILV 60
Query: 62 YVGAVIVFFLFIIMMLDIDI 81
Y+GAV+ +F +M+
Sbjct: 61 YIGAVVTLIVFTVMLTGGKE 80
>gi|11466053|ref|NP_038212.1| NADH dehydrogenase subunit 6 [Pichia canadensis]
gi|22654266|sp|P48927|NU6M_PICCA RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|11036341|dbj|BAA06567.2| NADH dehydrogenase subunit 6 [Pichia canadensis]
Length = 207
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 37/62 (59%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
NP+YS+ LI F+N A L+G ++++ ++VY+GA+ V FLFI+ + + E
Sbjct: 36 NPMYSILYLIILFINIAIYLYLIGISIMSLLYILVYIGAIAVLFLFILSLFTALPYLLES 95
Query: 87 RK 88
+
Sbjct: 96 KN 97
>gi|195975757|ref|YP_002122384.1| NADH dehydrogenase subunit 6 [Candida neerlandica]
gi|162423297|gb|ABX89436.1| NADH dehydrogenase subunit 6 [Candida neerlandica]
Length = 146
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 9/154 (5%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
S ++ I+S L + + +P+ S+ +LI F++ A G + ++ ++VYVGA+ + FL
Sbjct: 2 SIISGIASILAIGLLSPVQSILALICLFISIAISLYSSGYVLMGILYILVYVGAIAILFL 61
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
FI+ +L+I+ +G I+ +I+ + + + + L N +
Sbjct: 62 FILSLLNIE---------YKPVGGMNPLIIFFIIILLLPFDISYDSYAPIESLSTTYNEL 112
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
IG + Y++YAY L I IL+LS+IGAI +
Sbjct: 113 NIIGSIFYSEYAYILIILSIILVLSVIGAIAITR 146
>gi|325149529|ref|YP_004285982.1| NADH dehydrogenase subunit 6 [Zenaida auriculata]
gi|304365543|gb|ADM26350.1| NADH dehydrogenase subunit 6 [Zenaida auriculata]
Length = 172
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F + V + +P Y V L+ A V G + LG FVA++ ++V
Sbjct: 1 MMEFVLF--LGLCFVFGGLAVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVALVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D +G+ V A F + G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWADWGVVGYGLGMGLAVLVGFVVAGGFEFLGSGGTV 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ I G+ LLL++ + L+ R R
Sbjct: 118 DSEGVSSVRLDFSGVAMFYSCGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|66276112|ref|YP_238240.1| NADH dehydrogenase subunit 6 [Teratoscincus keyserlingii]
gi|52426672|gb|AAU47381.1| NADH dehydrogenase subunit 6 [Teratoscincus keyserlingii]
Length = 173
Score = 40.0 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 67/172 (38%), Gaps = 2/172 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F L + I+ V + +P Y L+ A + A + ++LG F+A++ ++Y
Sbjct: 1 MVYILF-LSTMCLILGIAGVASNPSPFYGAVGLVVAAASGASILVMLGGSFLAVVLFLIY 59
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+G ++V F + + + + + ++ + E++
Sbjct: 60 LGGMLVVFAYSVALSAEPYPETWGDPFVLYRVWGCVVLVFVFFWGFGGLTGLEGWGLEVA 119
Query: 123 RLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ ++ G LY L G++L+L++ + L R R
Sbjct: 120 GGKWESPPMDFSGVVRLYLDGGCLLFFCGWVLILALFVVLELTRGLSRGSLR 171
>gi|11643245|gb|AAG39483.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
Length = 172
Score = 39.6 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 59/141 (41%), Gaps = 3/141 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFVLGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIGKVLYTQY 142
+ + + G + +
Sbjct: 118 NNVGVSFVRSDFGGVAVLYSW 138
>gi|269986912|gb|EEZ93188.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Candidatus
Parvarchaeum acidiphilum ARMAN-4]
Length = 158
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 48/106 (45%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + S+ F + S + I ++ L+V+ +N I+S+ + ++ + L L A F+ + L+
Sbjct: 1 MDLGSIGFLVISALLISTAILMVSTKNLIHSLLYMFMFVISVTAMILYLNAVFLGIAELI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI 106
+Y G +++ I + K L + + + L+
Sbjct: 61 IYNGGIVLLLAIGISSMPEGTVTRLNSKLSFALPVIVLAVTSFLLL 106
>gi|225257|prf||1211235CR ORF 99B
Length = 99
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 3/83 (3%)
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK---GNNVENIGKVLYTQY 142
G I + + + + S + + +N + IG L T +
Sbjct: 16 WTVGDGITSMVCISLFISLITTISDTSWYGIIWTTRSNQIIEQDFISNSQQIGIHLSTDF 75
Query: 143 AYPLEISGFILLLSMIGAIVLML 165
P E+ ILL+++IGAI +
Sbjct: 76 FLPFELISIILLVALIGAIAVAR 98
>gi|226453420|ref|YP_002791079.1| NADH dehydrogenase subunit 6 [Tarentola mauritanica]
gi|167030956|gb|ABZ05717.1| NADH dehydrogenase subunit 6 [Tarentola mauritanica]
Length = 178
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 52/144 (36%), Gaps = 2/144 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ +FF + + V + +P Y V L+F + + LG F+ ++ +
Sbjct: 1 MLYFVIFFSFLCLL--LGGVGVASNPSPFYGVVGLVFGALAGCVALVSLGGSFIGLVLFI 58
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+G ++V F + + + ++ + + +L ++
Sbjct: 59 VYLGGMMVVFAYSVALAAEPYPEDSGGTILWWVLCYVVLVLFLWGVLMEVVGFGGVGVSG 118
Query: 121 LSRLVFKGNNVENIGKVLYTQYAY 144
+++ G VL + +
Sbjct: 119 ADCYGGYQLRLDSCGAVLMYFWGW 142
>gi|57854653|ref|YP_187599.1| NADH dehydrogenase subunit 6 [Astropecten polyacanthus]
gi|57506719|dbj|BAD86707.1| NADH dehydrogenase subunit 6 [Astropecten polyacanthus]
Length = 163
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 60/159 (37%), Gaps = 7/159 (4%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY + LV +P Y L+ ++ L+G F+A+I +++Y+G +
Sbjct: 2 IFYSLFVIMFFGGTLVFYSLSPYYGALGLVVVALSGCIFVSLVGVPFMALILILIYMGGM 61
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F++ + K + S I N + S + +
Sbjct: 62 LVVFVYSTAISAERYPTVSIDFKEIVILSLLIISWVLINFDLFVNGEISSWLSVANPGLL 121
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
LY + + L G+ILL+++I A+++
Sbjct: 122 GSGE-------LYNEMGWYLIGGGYILLVALIVALIITY 153
>gi|297624893|ref|YP_003706327.1| multisubunit sodium/proton antiporter subunit MrpA [Truepera
radiovictrix DSM 17093]
gi|297166073|gb|ADI15784.1| multisubunit sodium/proton antiporter, MrpA subunit (2.A.63.1)
[Truepera radiovictrix DSM 17093]
Length = 775
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ + + ++ S VV R+ + +V +L A + A LF+L A +A+ L V +VI+
Sbjct: 601 WVLAILCLLGSVFVVLARSRLAAVAALGIAGYSLALLFVLFSAPDLALTQLFVETLSVII 660
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
L II + + + KR + + +LA LI +
Sbjct: 661 LTLIIIHLPQLLRDDEMHDSKRPVVRDVSVSVLAGLLITALVWSVT 706
>gi|240266656|ref|YP_002971033.1| NADH dehydrogenase subunit 6 [Cygnus atratus]
gi|209887461|gb|ACI95078.1| NADH dehydrogenase subunit 6 [Cygnus atratus]
Length = 173
Score = 39.2 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G L LG FVA++ +VY+G
Sbjct: 2 AYFMFFLGICFVVGVLGVASNPSPYYGVVGLVLASVAGCGWLLGLGVSFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + + F+ ++ A L+ ++ +
Sbjct: 62 GMLVVFVYSVALAAEPFPEAWGDWRVVGYAAVFVTVVFAGLVFGGFMGSWKLGVATVNNV 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ Y ++G+ LLL++ + L+ R R
Sbjct: 122 GMSVVRLDFSGVSMFYSYGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|149183030|ref|ZP_01861484.1| MrpA [Bacillus sp. SG-1]
gi|148849260|gb|EDL63456.1| MrpA [Bacillus sp. SG-1]
Length = 796
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
L + + ++S+ ++ ++ + S+ +L + A F+L A +A+ LV+ +V +
Sbjct: 628 ILIALVMVVSAVAILFAKSRLTSIIALGAVGYSVALFFVLFRAPDLALTQLVIETVSVAL 687
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
F L + + K G + LI AS
Sbjct: 688 FLLCFYHLPPLSRHEERMSFKLGNALIAIGVGVVVTLITIAS 729
>gi|280978137|ref|YP_003345084.1| NADH dehydrogenase subunit 6 [Kaupichthys hyoproroides]
gi|13928306|dbj|BAB47009.1| NADH dehydrogenase subunit 6 [Kaupichthys hyoproroides]
gi|271280164|dbj|BAI53209.1| NADH dehydrogenase subunit 6 [Kaupichthys hyoproroides]
Length = 172
Score = 39.2 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 61/167 (36%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
+ F M ++ V + +P Y L+ A G+ + G F++++ ++Y+G +
Sbjct: 4 LIFFFLVMVVVGFLCVASNPSPYYGALGLVLAAAGGCGVLMGFGGSFISLVLFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F + + + ++ ++G+ + +C + + +
Sbjct: 64 LVVFAYSAALATEPYPDSWGSSSVFWVMVLYVGLGSVGAGLCYNGLFEGCSVVDEYHNFS 123
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
LY+ L G++LLL++ + L R
Sbjct: 124 VLRGDLVGVSYLYSFGGGMLITCGWVLLLTLFAILELTRGRSSGSLR 170
>gi|288900904|ref|YP_003433752.1| Nad6p [Candida viswanathii]
gi|162401891|gb|ABP03912.1| Nad6p [Candida viswanathii]
Length = 146
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
S ++ I+S L + + +P+ S+ +LI F++ A + G + ++ ++VYVGA+ + FL
Sbjct: 2 SLISGIASVLAIGLLSPVQSILALICLFLSIAISLYINGYVLMGILYILVYVGAIAILFL 61
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
FI+ +L+I+ +G I+ LI+ + F + + + N +
Sbjct: 62 FILSLLNIE---------YTPVGGMNPLIIFLILIMFLPFDISFESYSPIESINTVTNEL 112
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ +G + Y++YA L + G IL+LS+IGAI +
Sbjct: 113 DIVGTLFYSEYALILLLLGIILVLSVIGAIAITR 146
>gi|254471972|ref|ZP_05085373.1| pH adaption potassium efflux system protein PhaA [Pseudovibrio sp.
JE062]
gi|211959174|gb|EEA94373.1| pH adaption potassium efflux system protein PhaA [Pseudovibrio sp.
JE062]
Length = 782
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ + +A+I + V+T R + ++ L A ++LL GA ++ +V +V++
Sbjct: 608 WFIAAIAVIGVYAVLTARYRVTAIVLLGIQGFAVALIYLLFGAPDLSFTQFMVETLSVVI 667
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
L ++ L++ A + + F S + A ++ S +
Sbjct: 668 LAL-VMTRLNLKPTDARSSRGKAFDISIAVLCGAGISMLLMSIVQLPFDP 716
>gi|109689691|ref|YP_659575.1| NADH dehydrogenase subunit 6 [Ventrifossa garmani]
gi|109452375|dbj|BAE96408.1| NADH dehydrogenase subunit 6 [Ventrifossa garmani]
Length = 173
Score = 39.2 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 48/138 (34%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S + I+ + + + +P+Y+ L+ A+ L + G F++++ +VY+G V+V
Sbjct: 7 MLSGVFILGAVALASSPSPVYAALGLVLMAGGASMLLIDSGGPFLSLLFYLVYLGGVLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + + A + A + ++ + F
Sbjct: 67 FAHCVALAADNYPKAWGDVILLMVLVGITVSWTAAAVFNWLDWSSLALLNTYDYGDFTLL 126
Query: 130 NVENIGKVLYTQYAYPLE 147
E G L
Sbjct: 127 YPEGEGLSLMYDDGGWFL 144
>gi|268324508|emb|CBH38096.1| F420H2-quinone oxidoreductase, subunit J [uncultured archaeon]
Length = 160
Score = 39.2 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 44/114 (38%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M M+ + +A++SS V+ R+ YS + + A ++ + + V ++ +
Sbjct: 1 MSMEVWVLIALAGIAVLSSLGVLLSRDNFYSSLYMSATLIFVASIYAIFNLQPVFVLIVF 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
V+VGA+ + + + D E + + + A N V
Sbjct: 61 VFVGAIGIVTVAVAATYRSDPESQFSKLWAVPVLITAAVVGFAIYSYNLLNPNV 114
>gi|325126731|ref|YP_004285878.1| NADH dehydrogenase subunit 6 [Sturnus tristis]
gi|324022947|gb|ADY15514.1| NADH dehydrogenase subunit 6 [Sturnus tristis]
Length = 172
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F I+ V + +P Y V L+ A V G + LG FV ++ ++V
Sbjct: 1 MMEFVLF--LGLCFILGGLAVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVGLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D +G++ V F + EG
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWADWGVVGYGVGLGLVVMVGAVMVGGFELLGTEGVA 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + G ++ + I G+ LLL++ + L+ R R
Sbjct: 118 NNEGLSLVRSDFSGVAMFYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGSIR 170
>gi|256078793|ref|XP_002575679.1| muscarinic acetylcholine (GAR) receptor [Schistosoma mansoni]
gi|238660921|emb|CAZ31912.1| muscarinic acetylcholine (GAR) receptor, putative [Schistosoma
mansoni]
Length = 645
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 36/206 (17%), Positives = 69/206 (33%), Gaps = 30/206 (14%)
Query: 2 VMQSLFFYLFSFMAIISSFLVV----------TVRNPIYSVFS----LIFAF-VNAAGLF 46
V+ +L + SF+ I+ + LV+ T N + + LI F +N L+
Sbjct: 151 VILALLTAIVSFITIVGNILVLISFFVERALRTASNYFIASLAVTDVLIGFFSMNFYTLY 210
Query: 47 LLLGAEFVA-------------MITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
LLLG + Y +I F + + +K L
Sbjct: 211 LLLGRWPLGRLSCDLWLSLDYTACLTSQYTVLIITIDRFCSVRIPAKYRNWRTERKILIL 270
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLV--FKGNNVENIGKVLYTQYAYPLEISGF 151
+ I ++ + F +G + + I ++T + + +
Sbjct: 271 VAVTWIIPSSVFFTTIMGWPYFHTDGNPRPDDECYAEFATDPIFNTVFTVCYFWVTLCVM 330
Query: 152 ILLLSMIGAIVLMLRHRRDIKRQDIS 177
++L I + L+ R D KR +S
Sbjct: 331 LVLYVGIYRVAADLQKRSDEKRNRVS 356
>gi|5835078|ref|NP_008159.1|ND6_10512 NADH dehydrogenase subunit 6 [Petromyzon marinus]
gi|3122565|sp|Q35544|NU6M_PETMA RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|515497|gb|AAB08749.1| NADH dehydrogenase subunit 6 [Petromyzon marinus]
Length = 172
Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 68/163 (41%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
F M ++ +VV +P +S L+F V+ + L G F++++ +++Y+G ++V F
Sbjct: 8 FFVMFLLGVAVVVLSPSPYFSALGLVFVAVSGCFIVLYHGGTFLSLVLVLLYLGGMMVVF 67
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNN 130
++ + + F + I A + F+ S E +
Sbjct: 68 VYSAALAADPYPEVLGGRVIWFFVICVLCICFAGYMSFNDFFLDVSVACEGADYTGGIFG 127
Query: 131 VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
E +G + + L ++G+ LL+ + +V++ R R
Sbjct: 128 AEWLGVTTFYEVGLILVLAGWALLVCLFSVLVVVRGVNRGALR 170
>gi|290559124|gb|EFD92489.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Candidatus
Parvarchaeum acidophilus ARMAN-5]
Length = 158
Score = 38.8 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 68/169 (40%), Gaps = 12/169 (7%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + S+ F + S M I ++ L+V+ +N I+S+ + ++ + L L A F+ + L+
Sbjct: 1 MDIGSIGFIIISLMLIATALLMVSTKNMIHSLLYMFMFVISVTAMILYLNAVFLGIAELI 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y G +++ I + RK L F+G+ + L+ S
Sbjct: 61 IYNGGIVLLLAIGISSMPEGKVNLLNRKIAYVLPVIFLGVTSFLLLKMPSGSY------- 113
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
N N+G + Y L + F + S I ++ + +
Sbjct: 114 -----NSALNYSNLGVYFFQNYGGLLIVLAFTAIASAFSTIYIISKGDK 157
>gi|224588006|ref|YP_002640537.1| NADH dehydrogenase subunit 6 [Gallirallus okinawae]
gi|224471565|dbj|BAH24060.1| NADH dehydrogenase subunit 6 [Gallirallus okinawae]
Length = 173
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 1/166 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y ++ V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 6 YFLGVCFVLGGLGVASNPSPYYGVVGLVLASVAGCGWLLSLGLSFVSLVLFMVYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FL+ + + + + +L + V G + +
Sbjct: 66 VFLYSVSLAADPYPEGWGDWRVVGYVMGLVLVLVVGVSVGDFVGGWKFGVGTIDSVGTLS 125
Query: 129 NNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G +LY+Q I+G+ LLL++ + L+ R R
Sbjct: 126 VRLDFSGVAMLYSQGVGMFLIAGWGLLLTLFTVLELVRGLARGTIR 171
>gi|298674252|ref|YP_003726002.1| NADH-ubiquinone/plastoquinone oxidoreductase subunit 6
[Methanohalobium evestigatum Z-7303]
gi|298287240|gb|ADI73206.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Methanohalobium evestigatum Z-7303]
Length = 86
Score = 38.8 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 30/62 (48%)
Query: 104 ELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVL 163
+I + + EL + +N+E IG ++T+Y P EI +LL ++IGA +
Sbjct: 20 GMIGVSVIGTGWDTVEELPQTPEDQSNIERIGVSVFTKYVVPFEIMAIVLLSALIGAFYM 79
Query: 164 ML 165
Sbjct: 80 GR 81
>gi|307299645|ref|ZP_07579441.1| conserved hypothetical protein [Thermotogales bacterium
mesG1.Ag.4.2]
gi|306914697|gb|EFN45087.1| conserved hypothetical protein [Thermotogales bacterium
mesG1.Ag.4.2]
Length = 229
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S S + I+S+ +V++ + SV +A + +++GA VAM V V
Sbjct: 2 SFVIVAISSLYIVSAIIVLSSKTNFQSVIWFGIVGSLSAIIMMIIGAPDVAMTQFSVGVA 61
Query: 65 AVIVFFLFII 74
V++ ++ +
Sbjct: 62 LVLIVYIMAL 71
>gi|308178332|ref|YP_003917738.1| Na(+)/H(+) antiporter subunit A/B [Arthrobacter arilaitensis Re117]
gi|307745795|emb|CBT76767.1| Na(+)/H(+) antiporter subunit A/B [Arthrobacter arilaitensis Re117]
Length = 989
Score = 38.8 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 3/129 (2%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L + I + + +T +V + +F L GA +A+ L+V IV
Sbjct: 611 LIGAVIIAGAVVAITAPKRFMAVLMVSVTGYGMVAIFALQGAPDLALTQLLV---ETIVL 667
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + + + + + LA ++ A M E +S +
Sbjct: 668 VSFVLALRALPKRLWVGLTRIKWGRAILAIALAVMVVYIAIAMMAARTEARISLAWPEMA 727
Query: 130 NVENIGKVL 138
E GK +
Sbjct: 728 YTEGYGKNI 736
>gi|256593070|gb|ACV03490.1| NADH dehydrogenase subunit 6 [Keratoisidinae sp. SCF-2009]
Length = 53
Score = 38.8 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAM 56
F +FS + +SF+V++ NP+YSVF L+ AFVNAA +F+ LG +++ +
Sbjct: 4 LFMIFSLGIVGASFMVISTPNPVYSVFWLVIAFVNAAVMFISLGLDYIGL 53
>gi|237869153|ref|YP_002907489.1| NADH dehydrogenase subunit 6 [Papyrocranus congoensis]
gi|237648877|dbj|BAH58972.1| NADH dehydrogenase subunit 6 [Papyrocranus congoensis]
Length = 173
Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 52/143 (36%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F L ++ V + P Y+ L+ + G+ + G F++++ ++Y+G +
Sbjct: 4 LFILCLVGMVLGLVAVASNPAPYYAALGLVLSAAAGCGVLIGCGGSFLSLVLFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F + + + ++ L ++ + + + S G VF
Sbjct: 64 MVVFAYSAALAAELFPETWGERSVFGYFMVYVIGLVFIGVLICNGWYLDSWLGLDGGEVF 123
Query: 127 KGNNVENIGKVLYTQYAYPLEIS 149
+ E G L + + +
Sbjct: 124 SFSRGEMWGVGLLYSFGGWMLMI 146
>gi|114705421|ref|ZP_01438329.1| putative cation efflux system protein [Fulvimarina pelagi HTCC2506]
gi|114540206|gb|EAU43326.1| putative cation efflux system protein [Fulvimarina pelagi HTCC2506]
Length = 788
Score = 38.8 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 39/101 (38%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ + + VV RN + ++ SL A +F+L GA +A +V +V++
Sbjct: 611 WIILGLIVFGILAVVVSRNRLQAIVSLGIQGYAVAFIFMLQGAPDLAFTQFMVETLSVVI 670
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
L + + + +K + + L + A
Sbjct: 671 LALVMTRLKLSPSDHRPLAQKLPDATIGVLAGIGFGLFLLA 711
>gi|16797931|gb|AAL29218.1| NADH dehydrogenase subunit 6 [Pluvialis squatarola]
Length = 173
Score = 38.8 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ + V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLFLGVCFVLGALAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ +LA L++ S S +
Sbjct: 62 GMLVVFVYSVALAADPFPEAWGDWRVVGYGVSFVLVLAVGLVIGGSVGCWKSGVVTVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ Y ++G+ LLL++ + L+ R R
Sbjct: 122 GLSFVRLDFGGVAMFYSYGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|187251542|ref|YP_001876024.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Elusimicrobium minutum Pei191]
gi|186971702|gb|ACC98687.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6
[Elusimicrobium minutum Pei191]
Length = 161
Score = 38.8 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Query: 15 AIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFII 74
+ ++ RN IY+ L G+ +GA + + L V G + V F
Sbjct: 11 LVGTALFAAISRNFIYAAMWLALLSATLTGVMFSMGAPWAGVFELSVCSGLITVLFASTA 70
Query: 75 MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENI 134
+L D + A +K F+ +G+ +++ +F A + + V +I
Sbjct: 71 SLLGADSKYARNERK--FMRFLPLGLFLFGVVLWFISFPYSDAIKPNTVADMEPMLVGDI 128
>gi|288903516|ref|YP_003434271.1| NADH dehydrogenase subunit 6 [Candida sojae]
gi|162401878|gb|ABO27137.1| NADH dehydrogenase subunit 6 [Candida sojae]
Length = 146
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
S ++ I+S L + + +P+ S+ +LI F++ A G + ++ ++VYVGA+ + FL
Sbjct: 2 SLISGIASVLAIGLLSPVQSILALICLFLSVAVSLYSSGYVLMGILYILVYVGAIAILFL 61
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
FI+ +L+I+ +G I+ LI+ + F + + + N +
Sbjct: 62 FILSLLNIE---------YTPVGGMSPLIIFLLLILLLPLDISFDSYAPIESVYTAYNEL 112
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ IG + Y++YA L + G IL+LS+IGAI +
Sbjct: 113 DIIGTLFYSEYALILLLLGIILVLSVIGAIAITR 146
>gi|197311140|ref|YP_002154502.1| NADH dehydrogenase subunit 6 [Xenopoecilus sarasinorum]
gi|197304244|dbj|BAG69205.1| NADH dehydrogenase subunit 6 [Xenopoecilus sarasinorum]
Length = 173
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 63/166 (37%), Gaps = 1/166 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
YLF ++ V + +P ++ L+ G+ + G F+++I ++Y+G ++V
Sbjct: 6 YLFLIGLVLGLAAVASNPSPYFAALGLVLVAGMGCGVLVGHGGSFLSLILFLIYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + + L F++ I+ + S F
Sbjct: 66 VFAYSAALASEPYPEGWGSWPVSLLMLFYLFIVGLVGSYLCEGWFEGSWVVVDEFHEFSL 125
Query: 129 NNVENIGKVL-YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G L Y+ + L ++G++LLLS+ + L R R
Sbjct: 126 FRGDGGGIALIYSSGGFVLILAGWVLLLSLFVILELTRGLNRGSLR 171
>gi|11643363|gb|AAG39542.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643367|gb|AAG39544.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643375|gb|AAG39548.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643381|gb|AAG39551.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
Length = 172
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFVLGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + + G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFVRSDFGGVAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|86990387|ref|YP_492677.1| NADH dehydrogenase subunit 6 [Acanthaster brevispinus]
gi|86476026|dbj|BAE79190.1| NADH dehydrogenase subunit 6 [Acanthaster brevispinus]
Length = 162
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 64/159 (40%), Gaps = 8/159 (5%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+ + ++ S LV +P + L+ V+ L LG+ FVA++ +++Y+G +
Sbjct: 2 VFYIVLVVMLLGSTLVFYSLSPYFGALGLVLVAVSGCVLCGFLGSSFVALVLVLIYMGGM 61
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F++ + V + L + + + + S LV
Sbjct: 62 LVVFVYSTAISAERYPVVSNLNEVFLLSGVGVVWVFVSFDPFLGFSLGGWSVVVESDLVG 121
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
G +G L + GF+ L +++ A+V+
Sbjct: 122 GGTLYNVLGGYL--------LVGGFVFLFALVVALVITY 152
>gi|49257002|dbj|BAD24801.1| NADH dehydrogenase subunit 6 [Varanus komodoensis]
Length = 176
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 3/160 (1%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y I+S +V + +P+Y V SL+F A G+ ++ G F++++ +VY+G +IV
Sbjct: 6 YAMLGGLIVSGLMVSSNPSPLYGVVSLVFLAFLACGVLVVCGYSFLSLVLFLVYLGGMIV 65
Query: 69 FFLFIIMMLD--IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
F + + M + FLG + +I+ +++ +
Sbjct: 66 VFAYSVAMASELRPEAWLDWSVLPRFLGGLIGIFVVMGMILGGDVGVLYLGLYSSDCGGW 125
Query: 127 KGNNVENIGKVLYTQYAYP-LEISGFILLLSMIGAIVLML 165
+ +G L Y L + G++L+L++ + L+
Sbjct: 126 SVARSDVLGVSLLYWYGLAGLLMVGYVLMLTLFVVLELVR 165
>gi|11643241|gb|AAG39481.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643243|gb|AAG39482.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643247|gb|AAG39484.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643249|gb|AAG39485.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643251|gb|AAG39486.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643253|gb|AAG39487.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643255|gb|AAG39488.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643257|gb|AAG39489.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643259|gb|AAG39490.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643261|gb|AAG39491.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643263|gb|AAG39492.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643265|gb|AAG39493.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643267|gb|AAG39494.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643269|gb|AAG39495.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643271|gb|AAG39496.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643273|gb|AAG39497.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643275|gb|AAG39498.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643277|gb|AAG39499.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643279|gb|AAG39500.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643281|gb|AAG39501.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643285|gb|AAG39503.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643287|gb|AAG39504.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643289|gb|AAG39505.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643291|gb|AAG39506.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643293|gb|AAG39507.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643295|gb|AAG39508.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643297|gb|AAG39509.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643299|gb|AAG39510.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643301|gb|AAG39511.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643303|gb|AAG39512.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643305|gb|AAG39513.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643307|gb|AAG39514.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643309|gb|AAG39515.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643313|gb|AAG39517.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643315|gb|AAG39518.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643319|gb|AAG39520.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643323|gb|AAG39522.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643331|gb|AAG39526.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643339|gb|AAG39530.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643341|gb|AAG39531.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643343|gb|AAG39532.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643345|gb|AAG39533.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643347|gb|AAG39534.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643349|gb|AAG39535.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643351|gb|AAG39536.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643353|gb|AAG39537.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643355|gb|AAG39538.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643357|gb|AAG39539.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643359|gb|AAG39540.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643365|gb|AAG39543.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643369|gb|AAG39545.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643373|gb|AAG39547.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643377|gb|AAG39549.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
Length = 172
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFVLGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + + G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFVRSDFGGVAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|11643311|gb|AAG39516.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643317|gb|AAG39519.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643321|gb|AAG39521.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643325|gb|AAG39523.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643327|gb|AAG39524.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643329|gb|AAG39525.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
gi|11643333|gb|AAG39527.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
Length = 172
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFVLGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIMVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + + G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFVRSDFGGVAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|300776594|ref|ZP_07086452.1| sulfatase [Chryseobacterium gleum ATCC 35910]
gi|300502104|gb|EFK33244.1| sulfatase [Chryseobacterium gleum ATCC 35910]
Length = 652
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 25/163 (15%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRN------PIYSVFSLIFAFVNAAGLFLLLGAEFVA 55
++ S FYL S + + FL V+ + PI +F L F F GLF LL F
Sbjct: 14 LVYSFLFYLVSSLLLRFGFLAVSFQKADLSLLPIMKIFLLGFLFDFGVGLFFLLPYSFYL 73
Query: 56 MITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
+I Y+ ++ + F+ I + + F
Sbjct: 74 LIFPQKYIRSL------------------FNKIITYSTFIIFLLIHLFSFFAEVTFWQEF 115
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMI 158
+ + + E I + Y P+ IS +LL+++I
Sbjct: 116 ESRFNFIAVDYLVYTYEVI-NNINESYPLPVLISSILLLMTLI 157
>gi|327259675|ref|XP_003214661.1| PREDICTED: muscarinic acetylcholine receptor M4-like [Anolis
carolinensis]
Length = 699
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 36/240 (15%), Positives = 85/240 (35%), Gaps = 43/240 (17%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRN------PI--YSVFSL------IFAF-VNAAGL 45
MV + S + ++ + LV+ + Y +FSL I F +N +
Sbjct: 252 MVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGVFSMNLYTV 311
Query: 46 FLLLGAEFVAMI---------TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF 96
+++ G + + +V + + + + + P ++ +
Sbjct: 312 YIIKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAGL 371
Query: 97 FIGILAAELIVCASNFMVFSAEGELSRLVFKGNN-VENIGKVLYTQ------YAYPLEIS 149
I + + + ++F R V +G ++ + T + P+ I
Sbjct: 372 MIAVAWILSFILWAPAILFWQFIVGKRTVPEGQCYIQFLSNPAVTFGTAIAAFYLPVVIM 431
Query: 150 GFILLLSMIGAIVLMLRHRRDIKRQDIS-----------KQLESN-PDNSIVMVKVKSGK 197
+ + + + + RHR + K++ S KQ +N P ++ + +VK+GK
Sbjct: 432 TVLYIHISLASRSRVRRHRPESKKEKRSKPLSFLKTPLVKQNNNNSPKKAVEVKEVKNGK 491
>gi|229918331|ref|YP_002886977.1| monovalent cation/H+ antiporter subunit A [Exiguobacterium sp.
AT1b]
gi|229469760|gb|ACQ71532.1| monovalent cation/H+ antiporter, subunit 1 [Exiguobacterium sp.
AT1b]
Length = 813
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y+ + ++++ ++ +++ + S+ L A F+ GA +A+ LV+ +V +
Sbjct: 633 YVLGAVVMLAALAILFMKSRLPSIILLGVVGYGVALFFVFFGAPDLALTQLVIETVSVAL 692
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F L M DI ++ + F I + V +FM + + S +
Sbjct: 693 FLLVFYHMPDI----SKKEVRMRFKVGNAIVAVLVGTTVTLLSFMALTNKSLTSISEYYK 748
Query: 129 NNVENIG 135
NV +
Sbjct: 749 ENVYELA 755
>gi|333028806|ref|ZP_08456870.1| putative monovalent cation/H+ antiporter subunit A [Streptomyces
sp. Tu6071]
gi|332748658|gb|EGJ79099.1| putative monovalent cation/H+ antiporter subunit A [Streptomyces
sp. Tu6071]
Length = 987
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 16/168 (9%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
+ + + + L + VR + +V + + LF++ GA +A+ V +++V
Sbjct: 598 VAVLTCVVALLCLGVRRRMKAVVLVGLSGYGTGLLFVVQGAPDLALTQFCVETVSMVV-- 655
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNN 130
F++++ + + E + + + +L A A +V+ G S
Sbjct: 656 -FVLVLRRMPVHFEENYTRWRRVIRAPVALLGA----AAIGCVVWIMAGVRSASPAGSAM 710
Query: 131 VENIGKVLYTQYAYPLEI---------SGFILLLSMIGAIVLMLRHRR 169
VE + + +L + IG L+ HRR
Sbjct: 711 VEETAHHGLKDVVATILVDLRAWDTMGESAVLAAAAIGVTSLIYLHRR 758
>gi|327493043|ref|YP_004347990.1| NADH dehydrogenase subunit 6 [Canthigaster jactator]
gi|327392264|dbj|BAK09715.1| NADH dehydrogenase subunit 6 [Canthigaster jactator]
Length = 173
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 60/165 (36%), Gaps = 1/165 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
LF ++ V + +P + SL+ G+ + G F++++ ++Y+G ++V
Sbjct: 7 LFLMGLVLGLVAVASNPSPYFGALSLVAVGFFGCGVLVWHGGSFLSLVLFLIYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + S ++G+++ + + +S + +
Sbjct: 67 FAYSAALAAEPYPETLGSWPVLVSMSMYVGVVSLAFVSFLGGWGEYSWVVVEEVSEYSVS 126
Query: 130 NVENIGKVLYTQYAYPLEISGF-ILLLSMIGAIVLMLRHRRDIKR 173
+ G Y + + G LLL++ + L R R
Sbjct: 127 RGDTAGAAFMYSYGGGMLMVGAWALLLTLFVVLGLTRGLGRGALR 171
>gi|126792870|gb|ABO27287.1| NADH dehydrogenase subunit 6 [Orthopsittaca manilata]
Length = 170
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 71/170 (41%), Gaps = 4/170 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F +++S LV + +P Y V L+F V G + LGA FV+++ +VY+G
Sbjct: 2 TYFLVFLGVGFVLASLLVASNPSPHYGVVGLVFGSVVGCGWLVSLGASFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + + +G++ + + + +
Sbjct: 62 GMLVVFVYSVSLAADPFPQAWGG---WQVAGYVLGLVPVGVGFVVWGWDGGFKVDTVDSV 118
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G L+ ++G+ LLL++ + L+ R + R
Sbjct: 119 GVFFARLDFSGVALFYSCGVGLFLVAGWGLLLTLFVVLELVRGLSRGVIR 168
>gi|37596551|gb|AAQ95036.1| NADH dehydrogenase subunit 6 [Lonchura fringilloides]
Length = 159
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
Y+G ++V F++ + + + G ++ L++ MV
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWMDWGVASYGFGMGLVIVIGLVIGGITGMV 111
>gi|6691434|ref|NP_033649.1|ND6_15157 NADH dehydrogenase subunit 6 [Lampetra fluviatilis]
gi|6523341|emb|CAB62225.1| NADH dehydrogenase subunit 6 [Lampetra fluviatilis]
Length = 172
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 67/163 (41%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
F M ++ +VV +P +S L+F V+ + L G F++++ +++Y+G ++V F
Sbjct: 8 FFMMFLLGVAVVVLSPSPYFSALGLVFVAVSGCIVILYHGGTFLSLVLVLLYLGGMMVVF 67
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNN 130
++ + + F + + A + + + V
Sbjct: 68 VYSAALAADPYPEILGGRLFWFFMVCVLCVCFAGYFYFNNFLLSTLLACDGVNYVGGIFG 127
Query: 131 VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
E +G + + + L ++G+ LL+ + +V++ R R
Sbjct: 128 AEWLGVTTFYEVGFILILAGWALLVCLFSVLVVVRGVDRGALR 170
>gi|86990345|ref|YP_492664.1| NADH dehydrogenase subunit 6 [Acanthaster planci]
gi|86476012|dbj|BAE79177.1| NADH dehydrogenase subunit 6 [Acanthaster planci]
Length = 162
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 53/150 (35%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY + S LV +P + L+ V+ L LLG+ FVA++ +++Y+G +
Sbjct: 2 VFYAVIVVMPFGSTLVFYSLSPYFGALGLVLVAVSGCFLCGLLGSSFVALVLVLIYMGGM 61
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F++ + + L + S + + S LV
Sbjct: 62 LVVFVYSTAISAERYPAVSNLNEVLLLSGVGVVWAFVSFDPFLSFSLGGWSMTVESDLVG 121
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLS 156
G +G L L+++
Sbjct: 122 GGALYNALGGYLLVGGFVLFIALVVALVIT 151
>gi|16082007|ref|NP_394424.1| NADH dehydrogenase subunit J [Thermoplasma acidophilum DSM 1728]
gi|10640279|emb|CAC12093.1| NADH dehydrogenase, chain J related protein [Thermoplasma
acidophilum]
Length = 82
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 41/80 (51%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ +L F L + I S + V +N +SV L + A FL +GA F+A + ++V
Sbjct: 1 MIYTLIFSLIAIFLIAFSVMSVREKNLTHSVIYLFLFLIILASEFLFIGASFIAAVEVLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDI 81
Y+GAV+ F +M+
Sbjct: 61 YIGAVVTILAFTVMLTGGKE 80
>gi|57854707|ref|YP_187573.1| NADH dehydrogenase subunit 6 [Luidia quinalia]
gi|57506691|dbj|BAD86681.1| NADH dehydrogenase subunit 6 [Luidia quinalia]
Length = 163
Score = 38.1 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 7/159 (4%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FY+ + I LV +P Y L+ ++ + LLG F+A+I +++Y+G +
Sbjct: 2 IFYVAFIVMFIGGTLVFYSLSPYYGALGLVLVALSGCIISGLLGISFMALILVLIYMGGM 61
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F++ + + K + V E + +
Sbjct: 62 LVVFVYSTAISAERYPIVSGTLKEVLSLLAVGVLWVFIGFDSFLTLNVEGWESFCNIGLV 121
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ L+ + L +G+ILL+++I A+V+
Sbjct: 122 GSGS-------LFGAESLYLFGAGYILLVALIVALVITY 153
>gi|326535950|ref|YP_004300393.1| NADH dehydrogenase subunit 6 [Sturnus cineraceus]
gi|325305686|gb|ADZ10848.1| NADH dehydrogenase subunit 6 [Sturnus cineraceus]
Length = 172
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 69/173 (39%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F F F I+ V + +P Y V L+ A V G + L FV ++ ++V
Sbjct: 1 MMEFVLFLGFCF--ILGGLAVASNPSPYYGVVGLVLASVAGCGWLVSLEVSFVGLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D +G++ V F + G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWADWGVVGYGVGLGLVVMVGAVMVGGFELLGTGGVV 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + G ++ + I G+ LLL++ + L+ R R
Sbjct: 118 NNEGLSLVRSDFSGVAMFYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGSIR 170
>gi|280978053|ref|YP_003345006.1| NADH dehydrogenase subunit 6 [Pythonichthys microphthalmus]
gi|271280220|dbj|BAI53170.1| NADH dehydrogenase subunit 6 [Pythonichthys microphthalmus]
Length = 173
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 61/162 (37%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
F +LF M ++ V + P ++ L+ A V G+ G F++++ L++Y+G
Sbjct: 2 DYFLFLFMVMLVLGVLGVASNPAPYFAALGLVLAAVGGCGILAGYGGSFISLVLLLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F + + A ++ + + ++ +
Sbjct: 62 GMLVVFAYSAALAAEPYPEAWGDWSVLGHAVGYLFFCLLGVGLFYGGWLNYHCFVNDGHH 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
F + G +Y L I G+ LLL++ + L+
Sbjct: 122 YFSLLRGDFSGVSYIYYLGGGMLIICGWALLLTLFVVLELVR 163
>gi|221145503|ref|YP_002519714.1| NADH dehydrogenase subunit 6 [Brachaluteres ulvarum]
gi|219806639|dbj|BAH10341.1| NADH dehydrogenase subunit 6 [Brachaluteres ulvarum]
Length = 173
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 50/142 (35%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
LF ++ V + +P ++ L+ G+ G F++++ ++Y+G ++V
Sbjct: 7 LFLLGLVMGLLAVASNPSPYFAALGLVTVSGLGCGVLFGHGGSFLSLVLFLIYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + + + +++G++ + + FS +F
Sbjct: 67 FAYCSALAAEPHPESWGSEPVMLTVVWYVGMVFLVSSLFWGGWYEFSWTAVDEVSIFGVV 126
Query: 130 NVENIGKVLYTQYAYPLEISGF 151
+ G L I G
Sbjct: 127 RGDASGVALMFSVGGWFLIVGA 148
>gi|55583313|dbj|BAD69578.1| NADH dehydrogenase subunit 6 [Lingula anatina]
Length = 201
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 6/158 (3%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F + + ++S FL++ P+ SLI FV ++ L L+ +V I ++Y
Sbjct: 9 MVAFFMLVLATCMVVSMFLMLVSPTPMQLSCSLIGFFVTSSCLVALIVHPWVGAILFLIY 68
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
G ++V F++++ M D ++ L V GE +
Sbjct: 69 GGVILVAFVYVLAMDPSDEMKISKMDWHLLK------VVPLILAVSVIPLFFGGWMGETT 122
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGA 160
V ++ + L+ + + L M+
Sbjct: 123 EEVVFLSSPDGYFLPLFNKSNRVFMVITLASLAGMMAG 160
>gi|126437060|ref|YP_001072751.1| hypothetical protein Mjls_4491 [Mycobacterium sp. JLS]
gi|126236860|gb|ABO00261.1| NADH dehydrogenase subunit J [Mycobacterium sp. JLS]
Length = 187
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 19/168 (11%), Positives = 67/168 (39%), Gaps = 4/168 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F+L + +A+ + V V + + ++L +F+ +LL ++ ++T+++
Sbjct: 1 MIVQIVFWLLAVIAVAAGAAVFWVDSMARATYALASSFIAVGVAVVLLQQNYIGVVTILM 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
V + V ++++M + ++ + + + + + A
Sbjct: 61 MVMEMAVMAVYMVMFMGMNPALMPMSMVHDNRRALAAAGATFAFLASGIVLIDWPARQGQ 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ +G+ L + + + +++ +++ +VL R
Sbjct: 121 PPP----DVTMALGEALMGPHMLTMAVISPVMVATIVAGVVLAAARTR 164
>gi|16797934|gb|AAL29219.1| NADH dehydrogenase subunit 6 [Arenaria interpres]
Length = 173
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLLLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G+ F+ ++ + ++V +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGAGFMLVVISGMVVGGIGECWKVGVVTVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ Y ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSYGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|1171833|sp|P43193|NU6M_ALCTO RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394660|emb|CAA52121.1| NADH dehydrogenase subunit 6 [Alca torda]
gi|21104302|emb|CAC80344.1| NADH dehydrogenase subunit 6 [Alca torda]
Length = 173
Score = 38.1 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFMFFLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGISFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G+ F+G+L +++ + +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVIGYGAGFVGVLMVGMVIGGFVECWDFGVVTVDSV 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFGGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVRGLTRGAIR 171
>gi|325282538|ref|YP_004255079.1| NADH dehydrogenase (quinone) [Deinococcus proteolyticus MRP]
gi|324314347|gb|ADY25462.1| NADH dehydrogenase (quinone) [Deinococcus proteolyticus MRP]
Length = 827
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 50/157 (31%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
L + + + V RN + +V + ++ FL A +A+ +++ VI+
Sbjct: 589 ILIVTLLVAGAIGVSLSRNRLTAVVLMGLTGFGSSAAFLAFRAPDLALTQMIIETVTVIL 648
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F L M I + LG + + + + +
Sbjct: 649 FLLAFRYMPGIRALARTRTQYLVDLGIALSAGVGIMAYLLSVRPGLAESISPYYLQHSYT 708
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
N + + G I ++ M+G VL L
Sbjct: 709 GGGGNNVVNVTLVDFRGFDTMGEITVVGMVGLAVLAL 745
>gi|262200681|ref|YP_003271889.1| NADH/Ubiquinone/plastoquinone (complex I) [Gordonia bronchialis DSM
43247]
gi|262084028|gb|ACY19996.1| NADH/Ubiquinone/plastoquinone (complex I) [Gordonia bronchialis DSM
43247]
Length = 950
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 3/124 (2%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y+ + I S+ + +RN + + LF L GA +A+ +V +
Sbjct: 582 YVIGGIMIASALVATVLRNRLAGALIVGVTGYGCGMLFALYGAPDLALTQFLV---ETLT 638
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
+F++++ + E IG+ ++V F + +
Sbjct: 639 LVIFVLVLRKLPAEPEPRHSTGFKPLRALIGVAFGIMLVTIGLFAAAARSETPLHIDIPA 698
Query: 129 NNVE 132
E
Sbjct: 699 AAYE 702
>gi|239618143|ref|YP_002941465.1| hypothetical protein Kole_1776 [Kosmotoga olearia TBF 19.5.1]
gi|239506974|gb|ACR80461.1| hypothetical protein Kole_1776 [Kosmotoga olearia TBF 19.5.1]
Length = 231
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 32/65 (49%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+FS + ++++ +V + +V ++ + LLLGA VA+ V V VI+
Sbjct: 7 IFSSLYLLAALAIVGAKTNFKAVIWYGILGFFSSVMMLLLGAPDVALTQFTVGVTLVILV 66
Query: 70 FLFII 74
++ I
Sbjct: 67 YIMAI 71
>gi|318057952|ref|ZP_07976675.1| putative monovalent cation/H+ antiporter subunit A [Streptomyces
sp. SA3_actG]
Length = 987
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 16/168 (9%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
+ + + + L + VR + +V + + LF++ GA +A+ V +++V
Sbjct: 598 VAVLTCVVALLCLGVRRRMKAVVLVGLSGYGTGLLFVVQGAPDLALTQFCVETVSMVV-- 655
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNN 130
F++++ + + E + + + +L A A +V+ G S
Sbjct: 656 -FVLVLRRMPVHFEENYTRWRRVIRAPVALLGA----AAIGCVVWIMAGVRSASPAGSAM 710
Query: 131 VENIGKVLYTQYAYPLEI---------SGFILLLSMIGAIVLMLRHRR 169
VE + + +L + IG L+ HRR
Sbjct: 711 VEETAHHGLKDVVATILVDLRAWDTMGESAVLAAAAIGVTSLIYLHRR 758
>gi|1171839|sp|P43196|NU6M_CALMA RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394670|emb|CAA52138.1| NADH dehydrogenase subunit 6 [Calidris maritima]
Length = 173
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 68/165 (41%), Gaps = 1/165 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L ++ V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 7 LLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + A + G+ FI ++ A +IV +
Sbjct: 67 FVYSVSLAADPFPEAWGDWRVVGYGASFILVVIAGMIVGGLIECWKVGVVTVDSGGMFSV 126
Query: 130 NVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ Y ++G+ LLL++ + L+ R R
Sbjct: 127 RLDFSGVAMFYSYGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|238063437|ref|ZP_04608146.1| monovalent cation/H+ antiporter subunit A [Micromonospora sp. ATCC
39149]
gi|237885248|gb|EEP74076.1| monovalent cation/H+ antiporter subunit A [Micromonospora sp. ATCC
39149]
Length = 986
Score = 38.1 bits (87), Expect = 0.72, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + ++++ L V R + ++ + +A +F+L GA VA+ +V + VF
Sbjct: 629 VVGLVTVVAALLAVGARRRLTAMLLVGVTGYGSAMMFVLHGAPDVALTQFLVETATIAVF 688
Query: 70 FLFIIMMLDI-DIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
L + + + + +G++ A L + A
Sbjct: 689 VLVLRRLPERFSTRPLRRSRWVRRSVGAAVGVVLAGLCLVAVGA 732
>gi|11643335|gb|AAG39528.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
Length = 172
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFVLGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYWVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + + G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFVRSDFGGVAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|256393975|ref|YP_003115539.1| hypothetical protein Caci_4837 [Catenulispora acidiphila DSM
44928]
gi|256360201|gb|ACU73698.1| conserved hypothetical protein [Catenulispora acidiphila DSM
44928]
Length = 93
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 36/74 (48%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + L YL + + + LVV +RN +V +L + LF++LGA A +V
Sbjct: 1 MTVFWLMDYLLLALTLGCAVLVVRLRNLSGAVMALSAVGAFLSLLFVVLGAPDDAHSEIV 60
Query: 61 VYVGAVIVFFLFII 74
V A+ V +L I
Sbjct: 61 VGSIALPVLYLVAI 74
>gi|282862460|ref|ZP_06271522.1| NADH/Ubiquinone/plastoquinone (complex I) [Streptomyces sp. ACTE]
gi|282562799|gb|EFB68339.1| NADH/Ubiquinone/plastoquinone (complex I) [Streptomyces sp. ACTE]
Length = 966
Score = 38.1 bits (87), Expect = 0.78, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 57/165 (34%), Gaps = 8/165 (4%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
+ + ++ L +TV + +V A LF++ GA +A+ V ++IV
Sbjct: 598 VAVLTCAAALLCLTVSRRMKAVVLAGLTGYGTALLFVVQGAPDLALTQFCVETVSMIV-- 655
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNN 130
F++++ + + E + + A + A + +
Sbjct: 656 -FVLVLRRMPVHFQESVSPWRRAVRVPVALGGAATLGVALWVTAAARVAPPAGAAMVEET 714
Query: 131 VEN-----IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +L A+ +L + IG L+ HRR
Sbjct: 715 AHHGLKDVVATILVDLRAWDTMGESAVLAAAAIGVTSLIYVHRRS 759
>gi|169826257|ref|YP_001696415.1| monovalent cation/H+ antiporter subunit A [Lysinibacillus
sphaericus C3-41]
gi|168990745|gb|ACA38285.1| Na(+)/H(+) antiporter subunit A (Multiple resistance and pH
homeostasis protein A) (Mrp complex subunit A)
[Lysinibacillus sphaericus C3-41]
Length = 794
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 61/163 (37%), Gaps = 2/163 (1%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ F+ + ++ ++ + + ++ + A F++ A +A+ LVV +F
Sbjct: 625 ILVFVMVFAAVWMIFAKGRVTAMLLNGVLGYSIAFFFVIFRAPDLALTQLVVESVTTALF 684
Query: 70 FLFIIMMLDIDIEVAEPRKKRGF-LGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
L + D+ E R + + S F+G + + ++ F ++
Sbjct: 685 LLCFKYLPDLMPEAPRKRVQWSKAMISIFVGATVTMVGLAVVHYEQFEPVSSYFNDAYEL 744
Query: 129 NNVENIGKVLYTQY-AYPLEISGFILLLSMIGAIVLMLRHRRD 170
NI + + A+ + +LL++ +G L R
Sbjct: 745 AGGSNIVNTILGDFRAFDTMLEVVVLLIAGLGVYTLTKLKPRK 787
>gi|126792895|gb|ABO27303.1| NADH dehydrogenase subunit 6 [Cyanopsitta spixii]
gi|126792898|gb|ABO27305.1| NADH dehydrogenase subunit 6 [Cyanopsitta spixii]
Length = 170
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 70/170 (41%), Gaps = 4/170 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F +++S LV + +P Y V L+F V G + LGA FV+++ +VY+G
Sbjct: 2 TYFLVFLGISLVLASLLVASNPSPHYGVVGLVFGSVVGCGWLVSLGASFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + + +G + A + + + + +
Sbjct: 62 GMLVVFVYSVSLAADPFPQVWGG---WHAVGYVLGFVPAGVGFVVWGWGGWFKVDTVDGV 118
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G L+ ++G+ LLL++ + L+ R + R
Sbjct: 119 GVLLARLDLSGVALFYSCGAGMFLVAGWGLLLTLFVVLELVRGLSRGVIR 168
>gi|119719991|ref|YP_920486.1| NADH-plastoquinone oxidoreductase subunit 6 [Thermofilum pendens
Hrk 5]
gi|119525111|gb|ABL78483.1| conserved hypothetical NADH-plastoquinone oxidoreductase subunit 6
[Thermofilum pendens Hrk 5]
Length = 161
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +A+ SS L V V+ Y+ L F ++ A L LLG +VA+ +VYVGA ++F
Sbjct: 11 ISCAVAVASSLLAVKVKEDFYAAVLLGFVGLSVASLIALLGFTYVAVFHALVYVGATVLF 70
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILA 102
+ ++ + + G L S F G L
Sbjct: 71 VIMGVIFIGRGLGYERRMLAAGVLTSVFAGSLF 103
>gi|66276085|ref|YP_238228.1| NADH dehydrogenase subunit 6 [Gavia stellata]
gi|34223664|gb|AAQ63019.1| NADH dehydrogenase subunit 6 [Gavia stellata]
Length = 173
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L S I+ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLLLSVCFILGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G+ F +L A ++V +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVMGYGAGFALVLTAGVVVGDFVEWWKFGAVTVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLML 165
++ G ++ Y ++G+ LLL++ + L+
Sbjct: 122 GMFSVRLDFSGVAMFYSYGVGMFLVAGWGLLLTLFVVLELVR 163
>gi|28972926|gb|AAM95263.1| NADH dehydrogenase subunit 6 [Plexaurella nutans]
Length = 120
Score = 37.7 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVETQDHSHFLPVGLSVIFLFYSLLTNSPTYVS-------NPVIGSR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI----------KRQDISK 178
N+ IG LYT Y + ++ +LL++MIGAI+L + +QD+ +
Sbjct: 54 TNIGAIGSHLYTTYYELVLVASLVLLVAMIGAILLAKQPNSPSLYNSYGDSLRXKQDLFQ 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|270155274|gb|ACZ62672.1| NADH dehydrogenase subunit 6 [Pleuragramma antarcticum]
Length = 174
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 58/166 (34%), Gaps = 1/166 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
YLF ++ V + P Y+ L+ GL L LG F ++ ++Y+G ++V
Sbjct: 6 YLFMLGMVVGMAAVASNPPPFYAALGLVVVAAMGCGLILSLGGTFSCLVLFLIYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + + + + + ++G+ + S+
Sbjct: 66 VFAYSVALCAGAPSTGLGEESVLKCMAGYLGVTGVVGFLQGSSEGPAFWWFAGGEWEMAV 125
Query: 129 NNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
E G Y + + G+ LL+++ A+ + R R
Sbjct: 126 MQGEAAGVSEAYGGGGFLVVTCGWALLIALYVALEVSRGPSRGPVR 171
>gi|254939410|dbj|BAH86718.1| NADH dehydrogenase subunit 6 [Oryzias marmoratus]
Length = 173
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 1/166 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
YLF ++ V + +P ++ L+ G+ + G F+++I ++Y+G ++V
Sbjct: 6 YLFLIGLVLGLAAVASNPSPYFAALGLVLVAGMGCGVLVGHGGAFLSLILFLIYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + + L F++ I+ + + F
Sbjct: 66 VFAYSAALASEPYPEGWGSWPVTLLMVFYLFIVGLMGSYLCEGWFEGTWIVVDEFYEFSL 125
Query: 129 NNVENIGKVL-YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G L Y+ + L ++G++LLLS+ + L R R
Sbjct: 126 FRGDGGGIALIYSSGGFILILAGWVLLLSLFVILELTRGLSRGSLR 171
>gi|28972922|gb|AAM95261.1| NADH dehydrogenase subunit 6 [Plexaurella grisea]
Length = 120
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
FLF+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LFLFVIMLIQQPNKVETQDHSHFLPVGLSVIFLFYSLLTNSPTYVS-------NPVIGSR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK----------RQDISK 178
N+ IG LYT Y + ++ +LL++MIGAI+L + +QD+ +
Sbjct: 54 TNIGAIGSHLYTTYYELVLVASLVLLVAMIGAILLAKQPNSPSLYNSYGDSLRSKQDLFQ 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|328869222|gb|EGG17600.1| hypothetical protein DFA_08596 [Dictyostelium fasciculatum]
Length = 3386
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 31/212 (14%), Positives = 72/212 (33%), Gaps = 32/212 (15%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTV-------------RNPIYSVFSLIFAFVNAAGLFLLL 49
+L F L + ++ V+ + ++++ + I F+ ++ L
Sbjct: 1406 ATALLFTLAAIFLFHCAWGVLQLAVTGYQYFIHSEEPRLVHALIASITVFMLIRTIYFFL 1465
Query: 50 GAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFF-----------I 98
A+ AMI + YV V+ FL+ I + K G F +
Sbjct: 1466 LAKGTAMIPVADYVLVVLPTFLYFTCFTIIIVIWYMLVKTIANRGIFQRIRTMIGTINGV 1525
Query: 99 GILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE-ISGFIL--LL 155
+ +IV +F + + E + + + ++ I I+
Sbjct: 1526 LYILFVIIVLVFHFTRSTENNGDCGGRIPMESNETTPQRIVSIVYAVVQAIISLIIGGAF 1585
Query: 156 SMIGAIVLMLRHRRDI-----KRQDISKQLES 182
+ +G + + R+ + KR + K++ +
Sbjct: 1586 AYLGGTIYFMMKRKKVALDYKKRTNQQKKVST 1617
>gi|169142682|ref|YP_001687109.1| NADH dehydrogenase subunit 6 [Polytomella capuana]
gi|157429027|gb|ABV56561.1| NADH dehydrogenase subunit 6 [Polytomella capuana]
Length = 144
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 74/157 (47%), Gaps = 14/157 (8%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
LF+ S +V +P ++ I +++ + +LG EF+A++ +VYVGA
Sbjct: 2 LFYTALISALTALSLGIVLTTSPFMALMYSIVLYLDVQLILTMLGFEFMALVYALVYVGA 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
+ V FLF++M++ + + L+ + + + + FSA+ +
Sbjct: 62 LAVLFLFVVMLIRVQ--------------AAAFLSLSTNVSMWVAGIIGFSADTTPRSWM 107
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIV 162
G ++ N G +LYT YA ++ L +++ G++V
Sbjct: 108 IAGESLLNFGALLYTSYADLTILNSVALTVALFGSLV 144
>gi|240266450|ref|YP_002970802.1| NADH dehydrogenase subunit 6 [Cynoglossus semilaevis]
gi|164519776|gb|ABY59945.1| NADH dehydrogenase subunit 6 [Cynoglossus semilaevis]
gi|254763710|gb|ACT80241.1| NADH dehydrogenase subunit 6 [Cynoglossus semilaevis]
Length = 173
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ Y+ + ++ VV +P + +L+ A + ++ G F+A++ +VY+G
Sbjct: 2 TFIMYIALLVMVVGLGAVVAHPSPYFGSLTLVVVSGAACVVLIVYGGTFLALVMFLVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F + + + ++G+ + C +V + +
Sbjct: 62 GMLVVFAYTTALAADSFPYTLTYGDVMLYWTLYMGLSLICYVKCTVVGVVEGWDLFENWE 121
Query: 125 VFKGNNVENIGKVL-YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
F + G L Y+ L I G++LLL++I + L + R R
Sbjct: 122 EFGIFESDVRGMALMYSDVGSLLLIGGWMLLLTLIAVLELCRGNSRGALR 171
>gi|2789675|gb|AAB96918.1| NADH-ubiquinone oxidoreductase subunit 6 [Geomys personatus]
Length = 174
Score = 37.7 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 42/109 (38%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
YL ++ +V +PIY+ LI + GL L G ++ ++ ++Y+G ++V
Sbjct: 7 YLLLVAMVVGFLVVAVKPSPIYAGLGLIISGGAGCGLLLYHGCSYMGLMVYLIYLGGMLV 66
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA 117
F + + + + IL LIV ++
Sbjct: 67 VFGYTTALATEEYPEDWGSNVWVWFLLLSGIILEVILIVLFMDYGGLEW 115
>gi|317097355|ref|YP_004123555.1| NADH dehydrogenase subunit 6 [Cynoglossus abbreviatus]
gi|254763724|gb|ACT80254.1| NADH dehydrogenase subunit 6 [Cynoglossus abbreviatus]
Length = 173
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ Y + ++ VV +P + +L+ A + ++ G F+A++ +VY+G
Sbjct: 2 TFILYTALLVMVVGLGAVVAHPSPYFGSLTLVVVSGAACVVLIMYGGTFLALVMFLVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F + + + ++GI + + + +R
Sbjct: 62 GMLVVFAYTTALAADSFPYTLTYGDVMLYWALYMGISLVCYMKYMIMGDMGGWDLFENRE 121
Query: 125 VFKGNNVENIGKVL-YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
F + G L Y L I G++LLL+++ + L R R
Sbjct: 122 EFGIFESDVRGMALMYFDMGSLLLIGGWMLLLTLVAVLELCRGKSRGALR 171
>gi|254500159|ref|ZP_05112310.1| NADH-Ubiquinone/plastoquinone (complex I), domain protein
[Labrenzia alexandrii DFL-11]
gi|222436230|gb|EEE42909.1| NADH-Ubiquinone/plastoquinone (complex I), domain protein
[Labrenzia alexandrii DFL-11]
Length = 794
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + + + +A++ V+ + + ++ SL A +FLL GA +A L+
Sbjct: 602 MPIYTFYEWSIFLIAVLGLISVLVAKTRLTAIVSLGIQGFAVALIFLLFGAPDLAFTQLM 661
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
V +V++ L ++ L++ G+ + + +
Sbjct: 662 VETLSVVILAL-VMTRLNLSPRDHRNGVSTLITGAISVSVGLGLGLTLM 709
>gi|299541701|ref|ZP_07052031.1| monovalent cation/H+ antiporter subunit A [Lysinibacillus
fusiformis ZC1]
gi|298725796|gb|EFI66430.1| monovalent cation/H+ antiporter subunit A [Lysinibacillus
fusiformis ZC1]
Length = 803
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 61/163 (37%), Gaps = 2/163 (1%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ F+ I ++ ++ + + ++ + A F++ A +A+ LVV +F
Sbjct: 634 ILVFVMIFAAVWMIFAKGRVTAMLLNGVLGYSIAFFFVIFRAPDLALTQLVVESVTTALF 693
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFL-GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
L + D+ E+ R + S F+G + + ++ F ++
Sbjct: 694 LLCFKYLPDLMPELPRKRVQWSKALISIFVGATVTIVGLAVVHYDRFEPVATYFNDAYEL 753
Query: 129 NNVENIGKVLYTQY-AYPLEISGFILLLSMIGAIVLMLRHRRD 170
NI + + A+ + +LL++ +G L R
Sbjct: 754 AGGSNIVNTILGDFRAFDTMLEVVVLLIAGLGVYALTKLKPRK 796
>gi|302331482|gb|ADL21676.1| NADH ubiquinone oxidoreductase subunit 5 subunit A [Corynebacterium
pseudotuberculosis 1002]
Length = 964
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 11/167 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + + I+ + N + ++ + A +F L GA +A+ ++V V+VF
Sbjct: 615 IVAGIMIVMAIGATVQSNRLSALIMVGMTGYGATIIFALHGAPDLALTQMLVETITVVVF 674
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
L +L + + A +A E +
Sbjct: 675 ML----VLRRLPARTQWQPSHRANRLRAWLAAAVGFTAVVLTVFAINARTEAPVSSVIPD 730
Query: 130 NVENIGKVLYTQYAYPLEIS-------GFILLLSMIGAIVLMLRHRR 169
++IG ++I +L+++ IG L+ R +
Sbjct: 731 LAQDIGHGANAVNVLLVDIRAWDTFGESTVLIIAAIGVSSLIYRTKS 777
>gi|28916747|ref|NP_803168.1| NADH dehydrogenase subunit 6 [Pisaster ochraceus]
gi|28881692|emb|CAD70486.1| NADH dehydrogenase subunit 6 [Pisaster ochraceus]
Length = 162
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 8/159 (5%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FYL ++ S LV +P Y L+ ++ L L+G F+A++ L++YVG +
Sbjct: 2 IFYLTFIFMLLGSTLVFYSLSPYYGALGLVIVSMSGCILCSLVGLSFMALVLLLIYVGGM 61
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F++ + V + L + ++ + + V LV
Sbjct: 62 LVVFVYSSALSAERYPVVSNVNEVLVLFLILVLWVSLNFDLLLNFSEVGWVTYNNVDLVG 121
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
G VLY+Q + L + G+IL + +I A+V+
Sbjct: 122 --------GGVLYSQVWWYLVVGGYILFVGLIVALVVTY 152
>gi|325126787|ref|YP_004285930.1| NADH dehydrogenase subunit 6 [Bucorvus leadbeateri]
gi|304365515|gb|ADM26324.1| NADH dehydrogenase subunit 6 [Bucorvus leadbeateri]
Length = 173
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 65/162 (40%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G L LG F+A++ +VY+G
Sbjct: 2 AYFVLFLGLVFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGISFIALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ +L +++ +
Sbjct: 62 GMLVVFVYSVALAADPFPEAWGDWRVLGYGVGFVLVLVLGIVLGGFMGGWKWGVTTIDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLML 165
+ G ++ + ++G+ LLL++ + L+
Sbjct: 122 GMFSARADFSGVAMFYSWGVGMFLVAGWGLLLTLFVVLELVR 163
>gi|312233519|ref|YP_004021915.1| NADH dehydrogenase subunit 6 [Crocodylus palustris]
gi|268370950|gb|ACZ02717.1| NADH dehydrogenase subunit 6 [Crocodylus palustris]
gi|312227677|gb|ADQ52669.1| NADH dehydrogenase subunit 6 [Crocodylus palustris]
Length = 175
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 68/171 (39%), Gaps = 3/171 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F+L + +IS LV + Y V SL+FA + +GL + G F+ ++ L++Y+G
Sbjct: 3 ITFFLLCCLMMISVVLVASGVTIHYGVVSLLFAAMFGSGLLVAGGGSFMPLVVLLIYLGG 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAE--LIVCASNFMVFSAEGELSR 123
++V F F + D L + ++ +
Sbjct: 63 LLVVFAFCVGFTDDKYCELWGAGGSKVSAYVCGAGLGIGGYCMYNSTWAEALGCFVDSVE 122
Query: 124 LVFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
N E +G L+ + L +SG+ LL+ + ++L+ R R
Sbjct: 123 TWGGDMNNEFLGAGLFYLSGWGLLILSGWALLVVLFTIMILVRGRHRGALR 173
>gi|288930978|ref|YP_003435038.1| hypothetical protein Ferp_0591 [Ferroglobus placidus DSM 10642]
gi|288893226|gb|ADC64763.1| hypothetical protein Ferp_0591 [Ferroglobus placidus DSM 10642]
Length = 842
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 1/108 (0%)
Query: 45 LFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAE 104
LF+L VA+ +++Y+ A + +++ + F G I +
Sbjct: 202 LFILSALAIVAVRLVLIYLVAAAMPIFCFFLVIGVGPLRKLGEFVEYFWGLGIILPTLSV 261
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFI 152
L FMV A ++ +G L+ +A+P +S +
Sbjct: 262 LGALIVGFMVKFANTDMINQAGLMGVFIILG-PLFLVFAFPTIVSSMM 308
>gi|108793432|ref|YP_636891.1| NADH dehydrogenase subunit 6 [Sirembo imberbis]
gi|25005535|dbj|BAC23201.1| NADH dehydrogenase subunit 6 [Sirembo imberbis]
Length = 173
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 60/166 (36%), Gaps = 1/166 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++F + +I V + +P ++ F L+ ++GL + G F +++ ++Y+G ++V
Sbjct: 6 WVFLYGLVIGMAGVASNPSPYFAAFGLVVVAGMSSGLLVSYGGSFFSLVLFLIYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + + + + ++G + + V +
Sbjct: 66 VFAYCAALAAEPYPESWGSRSVLGYVMAYLGGVLLAVKVWGGAWYPGDWYLVEEADQLSL 125
Query: 129 NNVENIGKVLYTQYAYPLEISGF-ILLLSMIGAIVLMLRHRRDIKR 173
V+ G + + + LL+++ + L R R
Sbjct: 126 TRVDTGGVAAMYSFGGSVLLCSAWALLVALFVVLELTRGMSRGALR 171
>gi|261864031|gb|ACY01517.1| NADH dehydrogenase subunit 6 [Apteryx australis mantelli]
Length = 173
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ V G L LG FV+++ +VY+G
Sbjct: 2 TYFVFFLGLCFVLGVLAVASNPSPYYGVLGLVMGSVAGCGCLLSLGVSFVSLVLFLVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ +++ + +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGSWRVWGYGVGFLLVIFMGVVMGGLMELEVDGVRTVDCG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ + ++G+ LLL++ + L+ R R
Sbjct: 122 GPVSVRMDFSGVAMFYSWGVGMFLVAGWGLLLTLFVVLELVRGLSRGTIR 171
>gi|302206918|gb|ADL11260.1| NADH ubiquinone oxidoreductase subunit 5 subunit A [Corynebacterium
pseudotuberculosis C231]
gi|308277172|gb|ADO27071.1| NADH ubiquinone oxidoreductase subunit 5 subunit A [Corynebacterium
pseudotuberculosis I19]
Length = 952
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 11/167 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + + I+ + N + ++ + A +F L GA +A+ ++V V+VF
Sbjct: 603 IVAGIMIVMAIGATVQSNRLSALIMVGMTGYGATIIFALHGAPDLALTQMLVETITVVVF 662
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
L +L + + A +A E +
Sbjct: 663 ML----VLRRLPARTQWQPSHRANRLRAWLAAAVGFTAVVLTVFAINARTEAPVSSVIPD 718
Query: 130 NVENIGKVLYTQYAYPLEIS-------GFILLLSMIGAIVLMLRHRR 169
++IG ++I +L+++ IG L+ R +
Sbjct: 719 LAQDIGHGANAVNVLLVDIRAWDTFGESTVLIIAAIGVSSLIYRTKS 765
>gi|325126815|ref|YP_004285956.1| NADH dehydrogenase subunit 6 [Bycanistes brevis]
gi|304365529|gb|ADM26337.1| NADH dehydrogenase subunit 6 [Bycanistes brevis]
Length = 173
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 65/158 (41%), Gaps = 1/158 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ I+ V + +P Y V L+ V G L LGA F+A++ +VY+G ++V
Sbjct: 6 FFLGLAFILGGLAVASNPSPYYGVVGLVLGSVAGCGWLLSLGASFIALVLFMVYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F++ + + A + G+ F+ +L ++V +
Sbjct: 66 VFVYSVALAADPFPEAWGSWRVLGYGAGFVLVLVLGVVVGGLAECWKLGVVTVDAGGPFS 125
Query: 129 NNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLML 165
V+ G ++ + ++G+ LLL++ + L+
Sbjct: 126 VRVDFSGVAMFYSWGVGMFLVAGWGLLLTLFVVLELVR 163
>gi|300859227|ref|YP_003784210.1| multicomponent Na+:H+ antiporter subunit A [Corynebacterium
pseudotuberculosis FRC41]
gi|300686681|gb|ADK29603.1| multicomponent Na+:H+ antiporter subunit A [Corynebacterium
pseudotuberculosis FRC41]
Length = 952
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 55/167 (32%), Gaps = 11/167 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + + I+ + N + ++ + A +F L GA +A+ ++V V+VF
Sbjct: 603 IVAGIMIVMAIGATVQSNRLSALIMVGMTGYGATIIFALHGAPDLALTQMLVETITVVVF 662
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
L +L + + A +A E +
Sbjct: 663 ML----VLRRLPARTQWQPSHRANRLRAWLAAAVGFTAVVLTVFAINARTEAPVSSVIPD 718
Query: 130 NVENIGKVLYTQYAYPLEIS-------GFILLLSMIGAIVLMLRHRR 169
++IG ++I +L+++ IG L+ R +
Sbjct: 719 LAQDIGHGANAVNVLLVDIRAWDTFGESTVLIIAAIGVSSLIYRTKS 765
>gi|213136093|gb|ACJ43646.1| NADH dehydrogenase subunit 6 [Euproctus montanus]
Length = 172
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 60/151 (39%), Gaps = 1/151 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+LF F +I V + +P ++ F LI A ++ L + G F++++ +++Y+G ++V
Sbjct: 6 FLFMFGILIGLVAVASNPSPYFAAFGLILASISGCCLLVDFGISFLSIVLVLIYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFF-IGILAAELIVCASNFMVFSAEGELSRLVFK 127
F + + A + + ++ ++ F+ F
Sbjct: 66 VFAYSASLAAEPYPEAWGSWSVVIYVCIYLVLLMLGWMLFGCKIFVEFLFSESCVNFGVS 125
Query: 128 GNNVENIGKVLYTQYAYPLEISGFILLLSMI 158
G + +G + + + + +LL +
Sbjct: 126 GFDWGGVGGMYVLGGWFLIIVGWALLLTLFV 156
>gi|37596523|gb|AAQ95022.1| NADH dehydrogenase subunit 6 [Amadina fasciata]
Length = 159
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F F F ++ V + +P Y V L+ A V G + LG F++++ ++V
Sbjct: 1 MMEFVLFLGFCF--VLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFMSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D SF IG++ V F V EG +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPESWVDWGVVGYSFGIGLVVMIGFVVGGVFEVLVDEGVV 117
Query: 122 S 122
S
Sbjct: 118 S 118
>gi|11643403|gb|AAG39562.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
Length = 172
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S + V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFALGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVEYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + ++ G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFIRLDFGGAAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|55583356|ref|YP_138264.1| NADH dehydrogenase subunit 6 [Bombina bombina]
gi|46981591|gb|AAT07845.1| NADH dehydrogenase subunit 6 [Bombina bombina]
Length = 169
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 62/164 (37%), Gaps = 3/164 (1%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
F ++ V + +P Y+ L+ A + + GA F++++ ++Y+G ++V
Sbjct: 7 FFMVGLVLGLVAVASNPSPYYAALGLVVAAGAGCCVIVSFGASFLSLVLFLIYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + A ++ ++ + G+ +V
Sbjct: 67 FAYSAALTAEPYPEAWGSWSVVGYVLVYLLLVTGGCYMVGGLTFSELLFGDEMAVVRGDL 126
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ +Y+ L + G+ILLL++ + L H R R
Sbjct: 127 VGVSL---MYSSGGLMLVVGGWILLLTLFVVLELTRGHYRGGLR 167
>gi|310007459|gb|ADP00771.1| NADH dehydrogenase subunit 6 [Morone chrysops]
Length = 172
Score = 37.3 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ + F+L F ++S V +P Y F L+ + + LG F+A+I ++
Sbjct: 1 MMTYAACFFLVGF--VLSMVAVACNPSPFYGSFGLVAVAGFGCAVVVGLGGTFLALILVM 58
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKR-GFLGSFFIGILAAELIVCASNFMVFSAE- 118
+YVGA++V F++ + + G G + +G+LAA + V
Sbjct: 59 IYVGAMLVVFVYSAALAADRYPESWGSGGVAGQAGGYLLGLLAAFSFFWKEEYGVLWGPV 118
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMI 158
G + + ++ + + + A + +G +LL +
Sbjct: 119 GSVEGWASQRGDISGVSWMYSSGGALLVISAGALLLTLFV 158
>gi|213024364|ref|ZP_03338811.1| NADH dehydrogenase subunit J [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 100
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 12/81 (14%), Positives = 28/81 (34%), Gaps = 1/81 (1%)
Query: 90 RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEIS 149
+ +IG I+ A + + + + +G L+ Y +E++
Sbjct: 2 QWLKPQVWIGPAVLSAIMLAV-IVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELA 60
Query: 150 GFILLLSMIGAIVLMLRHRRD 170
+LL ++ A + R
Sbjct: 61 SMLLLAGLVVAFHVGREERAG 81
>gi|37596553|gb|AAQ95037.1| NADH dehydrogenase subunit 6 [Lonchura bicolor bicolor]
Length = 159
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + G ++ L++ MV
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWVDWGVASYGFGMGLVIVVGLVIGGITGMVTGDGMVN 118
Query: 122 SR 123
S
Sbjct: 119 SE 120
>gi|209966910|ref|YP_002299825.1| Na(+)/H(+) antiporter subunit A [Rhodospirillum centenum SW]
gi|209960376|gb|ACJ01013.1| Na(+)/H(+) antiporter subunit A [Rhodospirillum centenum SW]
Length = 802
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 40/107 (37%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + ++ + + R+ + ++ SL ++ A FL+ GA V + L+V VI+
Sbjct: 604 FMAGLMVVGTVGTILARSRLGAIVSLSVVGLSIAMFFLVYGAPDVGITQLMVETLTVIII 663
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS 116
L + + +R + + A + + V
Sbjct: 664 VLVLAKLPSFRRAEDGTVGERARNAVVAVAVGAVTTAIVLAVVSVPY 710
>gi|156364774|ref|XP_001626520.1| predicted protein [Nematostella vectensis]
gi|156213399|gb|EDO34420.1| predicted protein [Nematostella vectensis]
Length = 738
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 68/201 (33%), Gaps = 11/201 (5%)
Query: 10 LFSFMAIISSFLVV-TVRN-PIYSVFSLIFAFVNAAGLFLLLG-AEFVAMITLVVYVGAV 66
+ S + +I S+ V+ +RN P V SL + L+ L+ ++ A+ V
Sbjct: 423 MISLVVLIFSYAVLPELRNLPGRVVLSLAITMLLYHLLYFLVNQSDTRALCVAVAVSLHF 482
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ F M + K + I A ++ + A +S V
Sbjct: 483 ALLSAFCWMNVLAFDVHHTFTKPGQRRTASRGHCPGTYAIYAAYSWGIPLAIVTISFSVD 542
Query: 127 KGNNVE-NIGKVLY------TQYAYPLEI-SGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ G+ Y + Y + ILL + I M R K+ +
Sbjct: 543 LSGSWRIGYGRGEYCFIENPSAMLYLFLLPVAIILLYNFIALFHTMWHIRAVRKKTSKAS 602
Query: 179 QLESNPDNSIVMVKVKSGKGI 199
+ P+ I+ K+ S GI
Sbjct: 603 NQQRKPNLPIICFKMTSAMGI 623
>gi|108802854|ref|YP_637151.1| NADH dehydrogenase subunit 6 [Crocodylus porosus]
gi|81295123|emb|CAH18615.1| NADH dehydrogenase subunit 6 [Crocodylus porosus]
Length = 175
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 3/171 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F+L F+ ++S LV + Y V SL+FA + +GL + G F+ ++ L++Y+G
Sbjct: 3 ITFFLLCFLMMVSVVLVASGVTIHYGVVSLLFAAMFGSGLLVAGGGSFMPLVVLLIYLGG 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEGELSR 123
++V F F + D L L + V +
Sbjct: 63 LLVVFAFCVGFTDDKYCEFWGAGGSKVLAYVCGAGLGIGGYCVYGSAWAEVLGCFVDGVE 122
Query: 124 LVFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ E +G L+ + L +SG+ LL+ + ++++ R R
Sbjct: 123 AWGDDVSNEFLGVGLFYLSGWGLLILSGWALLVVLFTIMIMIRGRHRGALR 173
>gi|316976565|gb|EFV59842.1| tripartite motif protein-containing protein 67 [Trichinella spiralis]
Length = 2249
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 13/154 (8%), Positives = 49/154 (31%), Gaps = 8/154 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLL------LGAEFVAMITLVVY 62
++F +++++ + + + Y+V L+ F + + + + + ++V
Sbjct: 1108 WVFLGISLVAVIIWIYSGSFFYAVTVLLSMFFSVTVAYFVYGLVFRMEFFPFMNLLVIVL 1167
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+ + F++ + + + + A +++ + S
Sbjct: 1168 LIGIGADDTFVLKYVFDTSKKQGAKTIAPEDIVDALSYAALSMLITSVTTAAAFFSSLTS 1227
Query: 123 RLVFKGNNVENIGKVLYTQYAYP--LEISGFILL 154
++ G + Y + I+L
Sbjct: 1228 NVIVIKCFAVFAGTTMLMNYLLVVSFMPASLIIL 1261
>gi|327202092|gb|AEA36684.1| NADH dehydrogenase subunit 6 [Chrysomyxa rhododendri]
Length = 157
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 28 PIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPR 87
P+ SV LI F+ A +L +++++ +VVYVGA+IV LF+I+M+++
Sbjct: 1 PVTSVVYLITVFLLVAAYLVLQNMVYLSLVLIVVYVGAIIVLILFVIIMINLQDIRTTLN 60
Query: 88 KKRGFLGSFFIGILAAELIVCASNF 112
G + + + + S+
Sbjct: 61 IPWSLQGIASLMFIVIFINIDVSHI 85
>gi|11643337|gb|AAG39529.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
Length = 172
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 76/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFVLGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ +V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGVVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + + G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFVRSDFGGVAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|148922668|ref|YP_001293747.1| NADH dehydrogenase subunit 6 [Etrumeus teres]
gi|148762616|dbj|BAF64060.1| NADH dehydrogenase subunit 6 [Etrumeus teres]
Length = 175
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 72/174 (41%), Gaps = 2/174 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MVM+ + + ++S V + P Y +L+ A + L + GA F++++ +
Sbjct: 1 MVMELMIITWL-VVLVLSIIGVSSNPAPFYGALALVIAAGSGGVLLAVFGAPFLSLVFFL 59
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y+G ++V F + + FF+G+ A ++ ++ F
Sbjct: 60 IYLGGMLVVFGYATALAADSDPETLADDTAFEFVVFFVGLAAVGVMWFWGSWYEFGVGVL 119
Query: 121 LSRLVFKGNNVENIGK-VLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
S F + + G +LY + L +S L+L+++ + L +R R
Sbjct: 120 TSFKEFFVSRGDADGTGMLYFVGGFALGVSVVGLILALVVVLELSRGSKRGCLR 173
>gi|195661154|ref|YP_002117891.1| NADH dehydrogenase subunit 6 [Epinephelus akaara]
gi|153973795|gb|ABS54460.1| NADH dehydrogenase subunit 6 [Epinephelus akaara]
Length = 173
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 50/151 (33%), Gaps = 3/151 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F + I+ + V + +P + L+ G F+ G+ F+A+I +
Sbjct: 1 MCFTVICFLIC---WIVGAIAVASNPSPFFGALGLVMVAGVGCGFFVEFGSPFLALILFL 57
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y+G ++V F + + + ++ ++ ++ +
Sbjct: 58 IYLGGMLVVFAYSAALAAEPYPESWVNPTVVAYMCCYMAVVVGVASKFWHEWVGGFSGSA 117
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGF 151
F +N G + + +
Sbjct: 118 DEWGPFYIFRADNGGVAVMYSEGGWMLVVSA 148
>gi|5835471|ref|NP_008405.1|ND6_13475 NADH dehydrogenase subunit 6 [Balanoglossus carnosus]
gi|3065681|gb|AAD11944.1| NADH dehydrogenase subunit 6 [Balanoglossus carnosus]
Length = 160
Score = 37.3 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 40/95 (42%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ SF+ + LV R+P +S ++ A V +G ++ G F+ +I ++Y+G ++V
Sbjct: 4 IVLSFLTVGGGILVFISRSPYFSALGVVGAVVGFSGFLIMSGGVFLGLILFLMYLGGMLV 63
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAA 103
F + + K + F +
Sbjct: 64 VFAYSAALASDRYPDVGWSKALPLVVIFGGLVPYF 98
>gi|5835735|ref|NP_008548.1|ND6_15050 NADH dehydrogenase subunit 6 [Corvus frugilegus]
gi|4454087|emb|CAA77207.1| NADH dehydrogenase subunit 6 [Corvus frugilegus]
Length = 173
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 72/173 (41%), Gaps = 3/173 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F F ++ V + +P Y V L+ A + G L +G FV+++ ++V
Sbjct: 1 MMNFVLFMTLCF--VLGGLAVASNPSPYYGVVGLVVASIAGCGWLLSMGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + + G ++ +V + V +
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWGDWRVVGYGVGMGLVVVIVGVVMGAFSEVVMGGDTV 118
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + G + Y+ + L I+G+ LLL++ + L+ R R
Sbjct: 119 NNGGLSWTRTDFSGVAMFYSSGSGLLLIAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|1171837|sp|P43195|NU6M_BRAMA RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394664|emb|CAA52128.1| NADH dehydrogenase subunit 6 [Brachyramphus marmoratus]
Length = 173
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G L LGA FV+++ +VY+G
Sbjct: 2 TYFVLFLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGASFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G FI +L +++ + +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVIGYGMGFIVVLVVGVVISGFVEYWNFGVVTVDSV 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ + +G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSWGVGMFLAAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|301353491|ref|YP_003795711.1| NADH dehydrogenase subunit 6 [Morone saxatilis]
gi|300069619|gb|ADJ66721.1| NADH dehydrogenase subunit 6 [Morone saxatilis]
Length = 172
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 68/160 (42%), Gaps = 4/160 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ + F+L F ++S V +P Y F L+ + + LG F+A+I ++
Sbjct: 1 MMTYAACFFLVGF--VLSMVAVACNPSPFYGSFGLVAVAGFGCAVVVGLGGTFLALILVM 58
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKR-GFLGSFFIGILAAELIVCASNFMVFSAE- 118
+YVGA++V F++ + + G G + +G++AA + V
Sbjct: 59 IYVGAMLVVFVYSAALAADRYPESWGSGGVAGQAGGYLLGLMAAFSFFWKEEYGVLWGPV 118
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMI 158
G + + ++ + + + A + +G +LL +
Sbjct: 119 GSVEEWASQRGDISGVSWMYSSGGALLVISAGALLLTLFV 158
>gi|257077084|ref|ZP_05571445.1| hypothetical protein Faci_08471 [Ferroplasma acidarmanus fer1]
Length = 83
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 47/80 (58%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ ++ F++ + +A+I + ++ +N I+S L+ + + +F+ LG FV I L+V
Sbjct: 1 MIDTIIFFILAAIAVIMALSAISTKNLIHSSIFLLILLLMFSIIFIFLGLSFVGSIELLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDI 81
Y GAV++ +F++M+
Sbjct: 61 YAGAVVMLIVFVLMLTGGKD 80
>gi|11643361|gb|AAG39541.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643371|gb|AAG39546.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643379|gb|AAG39550.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643383|gb|AAG39552.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643385|gb|AAG39553.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643387|gb|AAG39554.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643389|gb|AAG39555.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643391|gb|AAG39556.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643393|gb|AAG39557.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643395|gb|AAG39558.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643397|gb|AAG39559.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643399|gb|AAG39560.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643401|gb|AAG39561.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643405|gb|AAG39563.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643407|gb|AAG39564.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643409|gb|AAG39565.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643411|gb|AAG39566.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
gi|11643415|gb|AAG39568.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643417|gb|AAG39569.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643421|gb|AAG39571.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643423|gb|AAG39572.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643429|gb|AAG39575.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643431|gb|AAG39576.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643433|gb|AAG39577.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643435|gb|AAG39578.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643437|gb|AAG39579.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643439|gb|AAG39580.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643441|gb|AAG39581.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643443|gb|AAG39582.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643445|gb|AAG39583.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643447|gb|AAG39584.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643449|gb|AAG39585.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
gi|11643451|gb|AAG39586.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides obscuratus]
gi|11643453|gb|AAG39587.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides obscuratus]
gi|11643455|gb|AAG39588.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides obscuratus]
gi|11643457|gb|AAG39589.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides obscuratus]
gi|11643459|gb|AAG39590.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides obscuratus]
Length = 172
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S + V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFALGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + ++ G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFIRLDFGGAAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|89056186|ref|YP_511637.1| putative monovalent cation/H+ antiporter subunit A [Jannaschia sp.
CCS1]
gi|88865735|gb|ABD56612.1| multisubunit sodium/proton antiporter, MrpA subunit [Jannaschia sp.
CCS1]
Length = 782
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 17/110 (15%), Positives = 45/110 (40%), Gaps = 2/110 (1%)
Query: 3 MQSLFF--YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
+ L F + + L ++ + ++ +L + A +F++ A VA+ L+
Sbjct: 586 LDDLLFKHWAVLLFITAGALLTALTQSRMTAIAALGVVGIGVALIFIMFSAPDVAITQLL 645
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
V V++ + ++ + + EP + + +G+L ++V
Sbjct: 646 VETLIVVLVAVAMLKLPHLSTRTDEPHRPVHAALAVSVGVLTTLVLVAVL 695
>gi|73672056|gb|AAZ80390.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672059|gb|AAZ80392.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672062|gb|AAZ80394.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672065|gb|AAZ80396.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672068|gb|AAZ80398.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672071|gb|AAZ80400.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672074|gb|AAZ80402.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672077|gb|AAZ80404.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672080|gb|AAZ80406.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672083|gb|AAZ80408.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672086|gb|AAZ80410.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319665|gb|ABA02995.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319669|gb|ABA02998.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319672|gb|ABA03000.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319675|gb|ABA03002.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319678|gb|ABA03004.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319681|gb|ABA03006.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319684|gb|ABA03008.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319687|gb|ABA03010.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319690|gb|ABA03012.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319693|gb|ABA03014.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319696|gb|ABA03016.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319698|gb|ABA03017.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
Length = 172
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 70/172 (40%), Gaps = 2/172 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ + V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGALGVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + G ++A +++ V ++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWGDLGVVGYGLGMGLVVAVGVVIGGGVECVVNSGTVN 118
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ V Y+ A I G+ LLL++ + L+ R R
Sbjct: 119 GEGLSVARTDFGGVAVFYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|27228469|ref|NP_758791.1| NADH dehydrogenase subunit 6 [Alligator sinensis]
gi|26284461|gb|AAN84928.1| NADH dehydrogenase subunit 6 [Alligator sinensis]
Length = 171
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 68/165 (41%), Gaps = 2/165 (1%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
F ++ + +V ++V SL+F V +GL ++ G F+ ++ L++Y+G ++V
Sbjct: 6 FFCCFMLVCAMMVAASSMIHFAVVSLLFVAVFGSGLVVVEGGSFMPLVVLLIYLGGLLVV 65
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F F + D D + F + I CA ++ + +
Sbjct: 66 FAFCVGFTD-DPFMGFWGVGVSKGAVFLYWVGLLIGICCAWGYLWGGMWISVGEPWSEVV 124
Query: 130 NVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
E++G +Y + + G+ LL+ + L+ HRR R
Sbjct: 125 VGESLGVSEMYCNGWVFVVVCGWALLIVLFVITGLIRGHRRGAFR 169
>gi|319948605|ref|ZP_08022730.1| putative monovalent cation/H+ antiporter subunit A [Dietzia
cinnamea P4]
gi|319437735|gb|EFV92730.1| putative monovalent cation/H+ antiporter subunit A [Dietzia
cinnamea P4]
Length = 1014
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+++ +RN + +V + A +F GA +A+ +V ++V
Sbjct: 606 FVMIPMTVAAVAATVLRNRLAAVICMSVTGYGVAVIFAFHGAPDLALTQALV-ETLMMVA 664
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF----MVFSAEGELSRLV 125
F+ ++ + ++ +++ ++ +G+L + A N V + +++ +
Sbjct: 665 FVLVLRTMPAEVPLSDGFRRLRAWLGIGVGLLVVIVGAYAINARQHPAVSAVFPDIAYQI 724
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
G N N+ V + EI+ +LL++ G L+ R+RR
Sbjct: 725 GNGANAVNVTLVDIRAWDTLGEIT--VLLVAATGVASLVFRNRR 766
>gi|322422405|ref|YP_004221834.1| NADH dehydrogenase subunit 6 [Ixobrychus cinnamomeus]
gi|316891687|gb|ADU57296.1| NADH dehydrogenase subunit 6 [Ixobrychus cinnamomeus]
Length = 173
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G L LGA F++++ +VY+G
Sbjct: 2 TYFVIFLGVCFVLGGLAVASNPSPYYGVVGLVLASVMGCGWLLSLGASFISLVLFLVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V FL+ + + A + G F+ + ++ S+ +
Sbjct: 62 GMLVVFLYSVSLAADPFPEAWGDWRVVGYGVGFVLVCVMGAVIGGLVGCWKSSVVTVDAG 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G + Y++ + G+ LLL++ + L+ R R
Sbjct: 122 DMFSTRLDFSGVAMFYSEGVGMFLVGGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|11643461|gb|AAG39591.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643463|gb|AAG39592.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643465|gb|AAG39593.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643467|gb|AAG39594.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643469|gb|AAG39595.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643471|gb|AAG39596.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643475|gb|AAG39598.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643477|gb|AAG39599.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643479|gb|AAG39600.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643481|gb|AAG39601.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643483|gb|AAG39602.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643485|gb|AAG39603.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643487|gb|AAG39604.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643489|gb|AAG39605.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643491|gb|AAG39606.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643493|gb|AAG39607.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643495|gb|AAG39608.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643497|gb|AAG39609.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643499|gb|AAG39610.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643501|gb|AAG39611.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643503|gb|AAG39612.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643505|gb|AAG39613.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643507|gb|AAG39614.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643509|gb|AAG39615.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643511|gb|AAG39616.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643513|gb|AAG39617.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643515|gb|AAG39618.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643517|gb|AAG39619.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643519|gb|AAG39620.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643521|gb|AAG39621.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643523|gb|AAG39622.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643525|gb|AAG39623.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643527|gb|AAG39624.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643529|gb|AAG39625.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643531|gb|AAG39626.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
gi|11643533|gb|AAG39627.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
Length = 172
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S + V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFALGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + ++ G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFVRLDFGGVAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|73672089|gb|AAZ80412.1| NADH dehydrogenase subunit 6 [Sitta pusilla]
Length = 172
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 69/173 (39%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ + V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGALGVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D +G++ +V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPESWGSLGVVGYGLGMGLVIIVGVVVGGGVEFVVNSGTV 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + G ++ + I G+ LLL++ + L+ R R
Sbjct: 118 NGEGLSVARTDFSGVAVFYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|11643427|gb|AAG39574.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
Length = 172
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S + V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFALGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPKAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + ++ G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFIRLDFGGAAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|19481576|gb|AAL88860.1|AF407127_1 NADH dehydrogenase subunit 6 [Petronia dentata]
Length = 159
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
Y+G ++V F++ + + A G ++ L++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPEAWDSWGVAGYGLGMSLVVMVGLVMGGMG 108
>gi|84488830|ref|YP_448776.1| NADH dehydrogenase subunit 6 [Phanogenia gracilis]
gi|66731081|gb|AAY51834.1| NADH dehydrogenase subunit 6 [Phanogenia gracilis]
Length = 163
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 66/163 (40%), Gaps = 7/163 (4%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y+ + ++ + LV +P +S L+ +++ + L G F+A+I L+VY+G +++
Sbjct: 4 YISIILTLLGTSLVFYSLSPYFSALGLVIVSISSCLILLQTGMNFLALIILLVYMGGMLI 63
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F++ + + R + I + L F + + +
Sbjct: 64 VFIYSSAL-------SAERFPTISNINEIITLCLFILFWNIILFENNNWNSVNNTNISNS 116
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
++E + + +G+ILL+S+I + + +
Sbjct: 117 ISIEGASYLFSPTMIWFFLFAGYILLISLIAVLNISQENESGS 159
>gi|2660574|emb|CAA71361.1| NADH dehydrogenase subunit 6 [Ficedula hypoleuca]
gi|2660576|emb|CAA71267.1| NADH dehydrogenase subunit 6 [Ficedula hypoleuca]
gi|13508726|emb|CAC35111.1| NADH dehydrogenase subunit 6 [Ficedula hypoleuca]
gi|13508729|emb|CAC35113.1| NADH dehydrogenase subunit 6 [Ficedula hypoleuca]
gi|14268378|emb|CAC39329.1| NADH dehydrogenase subunit 6 [Ficedula hypoleuca]
Length = 172
Score = 36.9 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+MQ + F ++ V + +P Y V L+ A + G + LGA FV+++ ++V
Sbjct: 1 MMQFVLF--LGVCFVLGGLAVASNPSPYYGVVGLVLASIAGCGWLVSLGASFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|315658720|ref|ZP_07911590.1| CPA3 family monovalent cation (K+ or Na+):proton (H+) antiporter-3
MnhA subunit [Staphylococcus lugdunensis M23590]
gi|315496351|gb|EFU84676.1| CPA3 family monovalent cation (K+ or Na+):proton (H+) antiporter-3
MnhA subunit [Staphylococcus lugdunensis M23590]
Length = 818
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+F + ++++F+VV ++ ++S+ L + LF+ A +A+ VV +
Sbjct: 636 IFEAAIIVLLVVAAFMVVLAKSRLFSIIMLSVIGYAVSVLFVFFKAPDLALTQFVVESIS 695
Query: 66 VIVFFLFIIMMLDIDIEVA-EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
+F L + +++ K L S +G++ L + A F++ E
Sbjct: 696 TALFLLCFYYLPNLNRYNETRSFKVTNALISAGVGLVVIILGLIAYGNRHFTSIAEY 752
>gi|37596517|gb|AAQ95019.1| NADH dehydrogenase subunit 6 [Nigrita bicolor]
Length = 159
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 49/113 (43%), Gaps = 2/113 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
Y+G ++V F++ + + + G +L I+ + ++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWVDWGVVGYGFGMGLVLVVGFIIGGVSGVL 111
>gi|20340062|gb|AAM19666.1| NADH dehydrogenase subunit 6 [Calidris acuminata]
Length = 173
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLLLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ +IV +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGMSFVLVVIVGMIVGGLVECWKVGVVTVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ Y ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSYGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|238801615|ref|YP_002922020.1| polyprotein [Wesselsbron virus]
gi|197631351|gb|ACH70606.1| polyprotein [Wesselsbron virus]
Length = 3405
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLI---FAFVNAAGLFLLLGAEFVAMI 57
M+ ++ +L +AII + V+ +F L + ++ A + +L+ A +++
Sbjct: 2148 MMPEATTIFLLVMLAIICTSGVI--------MFFLAPKGLSRMSMAMMTMLVSAYLMSLG 2199
Query: 58 TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+ + ++ FI M++ I + + +G+L+ L+V A
Sbjct: 2200 GMNPVQISCVMLVFFIFMVVLIPEPGTQRSTYDNQIIYLLVGVLSLILLVAA 2251
>gi|37596525|gb|AAQ95023.1| NADH dehydrogenase subunit 6 [Amadina erythrocephala]
Length = 159
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 3/121 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F F F ++ V + +P Y V L+ A V G + LG F++++ ++V
Sbjct: 1 MMEFVLFLGFCF--VLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFMSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D SF +G++ V F V EG +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPESWVDWGVVGYSFGMGLVVMVGFVIGGVFEVLVDEGTV 117
Query: 122 S 122
S
Sbjct: 118 S 118
>gi|16357316|ref|NP_443565.1| NADH dehydrogenase subunit 6 [Danacetichthys galathenus]
gi|16267117|dbj|BAB70259.1| NADH dehydrogenase subunit 6 [Danacetichthys galathenus]
Length = 173
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 3/167 (1%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
F LF F ++ V + +P Y+ L+ L + G F++++ ++Y+G ++
Sbjct: 7 FLLFGF--VVGLIAVASNPSPFYAALGLVVVAGLGCALLVGHGGPFLSLVLFLIYLGGML 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F + + + + +A + S F
Sbjct: 65 VVFAYSAALAAEPFPESWGNWSVLGQALVYFLGVALAFFHFYGGWSEASWVPVDELKTFS 124
Query: 128 GNNVENIGKVL-YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G L Y+ L IS ++LLL++ + L R R
Sbjct: 125 MFRGDMGGVPLIYSSGGGLLLISAWVLLLALFTVLELTRGMSRGALR 171
>gi|1171845|sp|P43202|NU6M_FRACI RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394680|emb|CAA52136.1| NADH dehydrogenase subunit 6 [Fratercula cirrhata]
Length = 173
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F S ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLFLSLCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+G+L L++ + + +
Sbjct: 62 GMLVVFVYSVALAADPFPEAWGDWRVVGYGVSFVGVLVMGLVIGGFIGCLNFGVVTVDSV 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|90418819|ref|ZP_01226730.1| putative NADH, ubiquinone oxidoreductase [Aurantimonas
manganoxydans SI85-9A1]
gi|90336899|gb|EAS50604.1| putative NADH, ubiquinone oxidoreductase [Aurantimonas
manganoxydans SI85-9A1]
Length = 785
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 37/81 (45%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ + + F VV +N + ++ SL A +F+L+GA ++ +V +V++
Sbjct: 608 WIVLALLLCGLFAVVVAKNRLTAIVSLGIQGFAVALIFMLMGAPDLSFTQFMVETLSVVI 667
Query: 69 FFLFIIMMLDIDIEVAEPRKK 89
L I + + R+K
Sbjct: 668 LALAITRLKLSPTDHRPTREK 688
>gi|11643413|gb|AAG39567.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides ludlowi]
Length = 172
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S + V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFALGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + ++ G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFIRLDFGGVAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|332284475|ref|YP_004416386.1| putative monovalent cation/H+ antiporter subunit A [Pusillimonas
sp. T7-7]
gi|330428428|gb|AEC19762.1| putative monovalent cation/H+ antiporter subunit A [Pusillimonas
sp. T7-7]
Length = 789
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ + I S+ +V+ R + + S+ A +FLL GA +A V +V++
Sbjct: 609 FVLPLLLIASTIMVLRSRGFVQGIISVGAVGFGVAVVFLLGGAPDLAFTQFSVEALSVVI 668
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
I M I+ R++ IG++ + + +V E
Sbjct: 669 LLAVIGHMPFRAIDPRPTRQRGRD---ALIGLMFGLMFIAVMFTVVALPFNE 717
>gi|37596543|gb|AAQ95032.1| NADH dehydrogenase subunit 6 [Taeniopygia guttata]
Length = 159
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
Y+G ++V F++ + + + G ++ A LIV + ++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWADWGVVGYGFGMGLVVVAGLIVGGVSGVL 111
>gi|289551218|ref|YP_003472122.1| Na(+) H(+) antiporter subunit A [Staphylococcus lugdunensis
HKU09-01]
gi|289180750|gb|ADC87995.1| Na(+) H(+) antiporter subunit A [Staphylococcus lugdunensis
HKU09-01]
Length = 805
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+F + ++++F+VV ++ ++S+ L + LF+ A +A+ VV +
Sbjct: 623 IFEAAIIVLLVVAAFMVVLAKSRLFSIIMLSVIGYAVSVLFVFFKAPDLALTQFVVESIS 682
Query: 66 VIVFFLFIIMMLDIDIEVA-EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
+F L + +++ K L S +G++ L + A F++ E
Sbjct: 683 TALFLLCFYYLPNLNRYNETRSFKVTNALISAGVGLVVIILGLIAYGNRHFTSIAEY 739
>gi|146411779|gb|ABI54474.1| polyprotein [Wesselsbron virus]
Length = 3405
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLI---FAFVNAAGLFLLLGAEFVAMI 57
M+ ++ +L +AII + V+ +F L + ++ A + +L+ A +++
Sbjct: 2148 MMPEATTIFLLVMLAIICTSGVI--------MFFLAPKGLSRMSMAMMTMLVSAYLMSLG 2199
Query: 58 TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+ + ++ FI M++ I + + +G+L+ L+V A
Sbjct: 2200 GMNPVQISCVMLVFFIFMVVLIPEPGTQRSTYDNQIIYLLVGVLSLILLVAA 2251
>gi|213136317|gb|ACJ43854.1| NADH dehydrogenase subunit 6 [Salamandrina terdigitata]
Length = 172
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 54/141 (38%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
LF II V + +P ++ F LI A V+ L + G F++++ +++Y+G ++V
Sbjct: 7 LFMVGVIIGLIAVASNPSPYFAAFGLILASVSGCCLLVDFGVSFLSLVLMLIYLGGMMVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + A + L + +F ++ E +
Sbjct: 67 FAYSASLAAEPYPEAWGSLSVVVYVCIYFVGLMFCGYLFGFSFSIWLVFSEDFSNLHTIG 126
Query: 130 NVENIGKVLYTQYAYPLEISG 150
+YT + L I+G
Sbjct: 127 GDWGGVGEIYTFGGWLLIITG 147
>gi|11643283|gb|AAG39502.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides viridanus]
Length = 172
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFVLGGLAVASNPSPYYGVLGLVVASIAGWGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + + G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFVRSDFGGVAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|226304992|ref|YP_002764950.1| Na(+)/H(+) antiporter subunit A/B [Rhodococcus erythropolis PR4]
gi|226184107|dbj|BAH32211.1| putative Na(+)/H(+) antiporter subunit A/B [Rhodococcus
erythropolis PR4]
Length = 945
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 11/168 (6%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ + M I ++ +RN + SV + LF L GA +A+ +V +
Sbjct: 599 FTIALMMISAAIAATLMRNRLASVILVGLTGYGCGVLFALHGAPDLALTQFLV---ETLT 655
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
+F++++ EV E + + + + + F + +
Sbjct: 656 LVIFVLVLRKFPAEVDESKAIGFKWPRAALAVAVGITVTTIAAFATNARNTRPIYELLPD 715
Query: 129 NNVENIGKVLYTQYAYPLEISG-------FILLLSMIGAIVLMLRHRR 169
+ +G ++I +LL++ G L+ R+RR
Sbjct: 716 AAYD-LGNGKNVVNVLLVDIRAWDTLGEISVLLVAATGVASLVFRNRR 762
>gi|313617443|gb|EFR89825.1| Na(+)/H(+) antiporter subunit A [Listeria innocua FSL S4-378]
Length = 327
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 147 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 206
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 207 IETISV-VLYLLVFYHLPQFSNIEEKPKWFSMKTILSIGVGVIITLVSLSAYNTTFYDS 264
>gi|291613649|ref|YP_003523806.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Sideroxydans lithotrophicus ES-1]
gi|291583761|gb|ADE11419.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Sideroxydans lithotrophicus ES-1]
Length = 837
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 56/161 (34%), Gaps = 12/161 (7%)
Query: 23 VTVRN-PIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
V +R+ P++ + + + A +LLL + + + A + + + L +
Sbjct: 39 VFLRSLPVHGAIEMAGSVIAAMVAYLLLRLHAIGEGSSFNHQIAAALLAMSGLDGLHAMM 98
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR-----------LVFKGNN 130
E L + F G+L A + + F L+ ++ G
Sbjct: 99 PDGESFVWLHSLATAFGGLLFAMIWLPGHWFKPVMRHWPLNAFLMAAAMGIYSILQPGQI 158
Query: 131 VENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ + +TQ A + I G + LL + L RH
Sbjct: 159 PQMLASGQFTQAAVIMNIGGGLFLLLAAVKLFLTYRHSAKS 199
>gi|296099624|gb|ADG95229.1| NADH dehydrogenase subunit 6 [Polypterus endlicherii]
Length = 167
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 53/120 (44%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+F +FS + +IS V + +P ++ F L+ A G+ + G F++MI ++Y+G
Sbjct: 2 VFMVIFSMIFLISLIAVASNPSPYFAAFGLMVAAGAGCGMLMQCGMTFLSMILFLIYLGG 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
++V F + + A + ++ ++ +V NF VF + V
Sbjct: 62 MLVVFAYSAALAAEPYPRAWGSWEVFSYVLGYVLLIVGMWVVFVGNFEVFDSIEVCFNAV 121
>gi|11643473|gb|AAG39597.1| NADH dehydrogenase subunit 6 [Phylloscopus plumbeitarsus]
Length = 172
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S + V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFALGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVMVDGGTV 117
Query: 122 SRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + ++ G VLY+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFVRLDFGGVAVLYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|18077894|ref|NP_542241.1| NADH dehydrogenase subunit 6 [Tachyglossus aculeatus]
gi|75054233|sp|Q8W9G2|NU6M_TACAC RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|17932776|emb|CAC88021.1| NADH dehydrogenase subunit 6 [Tachyglossus aculeatus]
Length = 166
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 43/103 (41%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F YL S M ++S + +PIY SL+ + G+ + LG F+ +I +VY+G +
Sbjct: 4 FIYLLSVMLVLSFMAFASNPSPIYGGLSLVLSGGVGCGIIVSLGGSFLGLIVFLVYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+V F + M + + +G+L
Sbjct: 64 LVVFGYTAAMATEEYPETWVDYTVVLNLAIMVGMLGVVWYEFF 106
>gi|37596533|gb|AAQ95027.1| NADH dehydrogenase subunit 6 [Neochmia temporalis]
Length = 159
Score = 36.5 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
Y+G ++V F++ + + + G ++ L+V
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWGDWGVVGYGFGMGLVIVIGLVV 104
>gi|112253910|ref|YP_717164.1| hypothetical protein BrnapMp067 [Brassica napus]
gi|37591112|dbj|BAC98914.1| hypothetical protein [Brassica napus]
Length = 261
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 33/101 (32%), Gaps = 11/101 (10%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLF-----------LLLGAEFVAMIT 58
+ S A++ LV N ++SV I F + F L + +F+
Sbjct: 5 VLSSPALVFGLLVTRAINFVHSVLFPIPVFCSIETFFTYFSSFPIIRKLSMKWQFLWFSI 64
Query: 59 LVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIG 99
+++ LF + L D + + F G
Sbjct: 65 FKFIFSIIMIKLLFSVGYLCFDDLTRAISQFYPPISGFMGG 105
>gi|116734736|ref|YP_842372.1| NADH dehydrogenase subunit 6 [Dryocopus pileatus]
gi|109676628|gb|ABG37719.1| NADH dehydrogenase subunit 6 [Dryocopus pileatus]
Length = 173
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 62/162 (38%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F I+ V + +P Y V L+ A V G L +G FVA++ +VY+G
Sbjct: 2 TYFMLFLGVCFILGGLAVASNPSPYYGVVGLVLASVVGCGWLLSVGVSFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + + G +G L +V + +
Sbjct: 62 GMLVVFVYSVALAADPFPETWGDWRVLGYGVGLVGTLLMGAVVGGVGENLKLGVWTVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLML 165
+ G ++ + ++G+ LLL++ + L+
Sbjct: 122 GAVFVRSDFSGVAMFYSWGVGMFLVAGWGLLLTLFVVLELVR 163
>gi|37596529|gb|AAQ95025.1| NADH dehydrogenase subunit 6 [Amandava formosa]
Length = 159
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
Y+G ++V F++ + + D F +G++ ++ S F V +G
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPESWADWGVVGYGFGMGLVVMVGLIVGSVFGVLVEDGT 116
>gi|225622229|ref|YP_002726517.1| NADH dehydrogenase subunit 6 [Eretmochelys imbricata]
gi|99079658|gb|ABF66064.1| NADH dehydrogenase subunit 6 [Eretmochelys imbricata]
Length = 173
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 5/168 (2%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+LF F + V +P Y V SL+ GL + +G FV+++ ++Y+G ++V
Sbjct: 6 FLFGFCFVFWMVGVSCNPSPYYGVLSLVLGAAFGCGLLVSMGGSFVSVVLFLIYLGGMLV 65
Query: 69 FFLFIIMMLDIDI---EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
F + +++ + F + +++ V+ +V
Sbjct: 66 IFAYSSALVEEPYPVAWGNRGGVVYVYDLCFSYCKVWGNVLLTVEYGKVWWCYNWCWWVV 125
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
VL+ + I+G+ LLL++ + L+ R + R
Sbjct: 126 CCSVKFWWGSVVLFGSWL--FLIAGWGLLLTLFVVMELVRGLSRGVLR 171
>gi|71658006|ref|YP_272097.1| NADH dehydrogenase subunit 6 [Gallus varius]
gi|71040248|dbj|BAE16103.1| NADH dehydrogenase subunit 6 [Gallus varius]
Length = 173
Score = 36.5 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 66/170 (38%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ + V + +P Y V L+ A V G + LG FV++ +VY+G
Sbjct: 2 TYFVIFLGICFMLGALAVASNPSPYYGVVGLVVASVMGCGWLVSLGVSFVSLALFLVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ +++ +
Sbjct: 62 GMLVVFVYSVSLAADPYPEAWGSWRVVGYGLGFVLVVWMGVVLGGFVDFWKVGVVTVDGA 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMSFGRLDFSGVAVFYSCGVGLFLVAGWGLLLALFVVLELVRGLSRGAIR 171
>gi|239982990|ref|ZP_04705514.1| putative monovalent cation/H+ antiporter subunit A [Streptomyces
albus J1074]
gi|291454823|ref|ZP_06594213.1| NADH dehydrogenase [Streptomyces albus J1074]
gi|291357772|gb|EFE84674.1| NADH dehydrogenase [Streptomyces albus J1074]
Length = 980
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 36/94 (38%), Gaps = 3/94 (3%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
+ + ++ + +TV + V AA LF+L GA +A+ + +
Sbjct: 598 IAVLTCAAALMCLTVSRRMKGVVLAGLTGYGAALLFVLQGAPDLALTQ---FGVETVSMI 654
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAE 104
+FI+++ + + E + + ++
Sbjct: 655 VFILVLRRMPVHFEESFSPWRRWARIPVALASSL 688
>gi|11643425|gb|AAG39573.1| NADH dehydrogenase subunit 6 [Phylloscopus trochiloides
trochiloides]
Length = 172
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S + V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLCFALGGLAVASNPSPYYGVLGLVVASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ V + F V G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWGDWGVVGYGFGMGMVIVVGAVVSGVFEVLVDGGTV 117
Query: 122 SRLVFKGNNVENIGKVL-YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + ++ G + Y+ A I G+ LLL++ + L+ R R
Sbjct: 118 NNVGVSFIRLDFGGAAVPYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|73672506|gb|AAZ80438.1| NADH dehydrogenase subunit 6 [Sitta pusilla]
gi|73672509|gb|AAZ80440.1| NADH dehydrogenase subunit 6 [Sitta pusilla]
Length = 168
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 68/164 (41%), Gaps = 2/164 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ + V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 4 MMEFVLF--LGLCFVLGALGVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVSLVLVMV 61
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + G ++ ++V V ++
Sbjct: 62 YLGGMLVVFVYSVSLAADPYPESWGNLGVVGYGLGMGLVIIVGVVVGGGVEFVVNSGTVN 121
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ + V Y+ A I G+ LLL++ + L+
Sbjct: 122 GEGLSVARTDFSGVAVFYSWGAGLFLIGGWGLLLTLFVVLELVR 165
>gi|57641158|ref|YP_183636.1| hypothetical protein TK1223 [Thermococcus kodakarensis KOD1]
gi|57159482|dbj|BAD85412.1| membrane bound hydrogenase, MbxD subunit [Thermococcus
kodakarensis KOD1]
Length = 94
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 33/91 (36%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + Y+ + IIS+ L V R+ + + + + A+ LF +L A VAM
Sbjct: 1 MNCITCIEYIVVALMIISAILAVEWRDLLAAAVGMAAVSLFASILFFMLQAPDVAMTEAA 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRG 91
+ +F + E +
Sbjct: 61 IGAALSGAIVIFAVKRTQRFETEEEEKPGWW 91
>gi|319442877|ref|ZP_07992033.1| integral membrane protein [Corynebacterium variabile DSM 44702]
Length = 619
Score = 36.5 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 53/173 (30%), Gaps = 9/173 (5%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F + +A++ + + P+ L+ + + +A + +G + +
Sbjct: 139 MFSGRVTFATGAAIAML-AVWAFQRKRPVTGALLLVVSGLASALVPAFVGMVLLPFFLVR 197
Query: 61 VY--------VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
Y +G + ++ + P + IG + A A+N
Sbjct: 198 RYRNARMWWAIGGAALGVALPYLLFGAPGQQPYPVTSFLWYLVIGIGAVLAMDSPVATNH 257
Query: 113 MVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
L +V + G + + +L S+ VL L
Sbjct: 258 APARWIAPLGIVVATVLFIIPTGVGSNLGRFFLFILPCVVLFFSLKSPKVLAL 310
>gi|229493700|ref|ZP_04387484.1| NADH-Ubiquinone/plastoquinone [Rhodococcus erythropolis SK121]
gi|229319369|gb|EEN85206.1| NADH-Ubiquinone/plastoquinone [Rhodococcus erythropolis SK121]
Length = 945
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 59/168 (35%), Gaps = 11/168 (6%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ + M I ++ +RN + SV + LF L GA +A+ +V +
Sbjct: 599 FTIALMMISAAIAATLMRNRLASVILVGLTGYGCGVLFALHGAPDLALTQFLV---ETLT 655
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
+F++++ EV E + + + + + F + +
Sbjct: 656 LVIFVLVLRKFPAEVDESKAIGFKWPRAALAVAVGITVTTIAAFATNARNTRPIYELLPD 715
Query: 129 NNVENIGKVLYTQYAYPLEISG-------FILLLSMIGAIVLMLRHRR 169
+ +G ++I +LL++ G L+ R+RR
Sbjct: 716 AAYD-LGNGKNVVNVLLVDIRAWDTLGEISVLLVAATGVASLVFRNRR 762
>gi|16356937|ref|NP_443656.1| NADH dehydrogenase subunit 6 [Monopterus albus]
gi|16267252|dbj|BAB70376.1| NADH dehydrogenase subunit 6 [Monopterus albus]
Length = 173
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 15/107 (14%), Positives = 40/107 (37%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ F ++ S V + +P ++ L+ G+ + G F+ ++ ++Y+G ++V
Sbjct: 7 VLLFGLMVGSVGVASNPSPYFAAMGLVMVSGVGCGVLICFGGSFLPLVFFLIYLGGMMVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS 116
F F + + + ++ + V + F
Sbjct: 67 FAFSAALSAEPYPYGWGNRSVKMYVAAYVLGVGCAWKVLLGKWSGFW 113
>gi|297461024|ref|XP_001254526.3| PREDICTED: glycerophosphodiester phosphodiesterase domain
containing 2-like [Bos taurus]
Length = 685
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 25/163 (15%)
Query: 34 SLIFAFVNAAGLFL----------------LLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
LI +F + L LGA + +V + + + + M++
Sbjct: 69 WLIMSFFLSTILLFTWVETSNEYNGFDWVVFLGAR-IWFFWSLVLLSVIGILAAYTTMLV 127
Query: 78 DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKV 137
+ + + + I +L L+ +++ + E + +
Sbjct: 128 VLGFLLCWEKNELYLHWYHKIMVLIVILLCSFLMWILLTFWRERWLTI-------GLSLQ 180
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR-QDISKQ 179
++ Y + IS +LL + ++ L ++R Q+ S++
Sbjct: 181 VFAPYIHLSSISAMVLLSWPVAFYLIHLEGEARMRRYQNTSER 223
>gi|223042880|ref|ZP_03612928.1| Na(+)/H(+) antiporter subunit A (Multiple resistance and
pHhomeostasis protein A) (Mrp complex subunit A)
[Staphylococcus capitis SK14]
gi|222443734|gb|EEE49831.1| Na(+)/H(+) antiporter subunit A (Multiple resistance and
pHhomeostasis protein A) (Mrp complex subunit A)
[Staphylococcus capitis SK14]
Length = 683
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 37/98 (37%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
+++S L++ ++ ++S+ L + LF+ A +A+ VV + +F L
Sbjct: 512 LFLLVASLLIIFAKSRLFSIIMLSAVGYAISVLFIFFKAPDLALTQFVVESISTALFLLC 571
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
+ +++ P K L ++
Sbjct: 572 FYHLPNLNRYNESPAFKINNAMISAGVGLVVIILGLIG 609
>gi|254172206|ref|ZP_04878882.1| membrane bound hydrogenase, MbxD subunit [Thermococcus sp. AM4]
gi|214034102|gb|EEB74928.1| membrane bound hydrogenase, MbxD subunit [Thermococcus sp. AM4]
Length = 94
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 34/91 (37%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + Y+ + I+S+ L V R+ + + + + A+ LF +L A VAM
Sbjct: 1 MNCITCVEYIIVALMILSAVLAVEWRDLLAAAVGMAAVSLFASILFFMLQAPDVAMTEAA 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRG 91
+ F+F I E +
Sbjct: 61 IGAALSGAVFIFAIKRTQRFETEDEEKPGWW 91
>gi|190349341|ref|YP_001974591.1| NADH dehydrogenase subunit 6 [Cairina moschata]
gi|189343012|gb|ACD92041.1| NADH dehydrogenase subunit 6 [Cairina moschata]
Length = 173
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G L LG FVA++ +VY+G
Sbjct: 2 TYFVFFLGVCFVLGILGVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + + ++ L++ + +
Sbjct: 62 GMLVVFVYSVALAAEPFPEAWGDWRVLGYVVALVVVVLGGLVLGGFVGSWGFGVNTVDSV 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G +LY++ I+G+ LLL++ + L+ R R
Sbjct: 122 GMFVVRLDFSGVAMLYSRGVGMFLIAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|11545720|ref|NP_071464.1| NADH dehydrogenase subunit 6 [Sardinops melanostictus]
gi|11526570|dbj|BAB18613.1| NADH dehydrogenase subunit 6 [Sardinops melanostictus]
Length = 172
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 60/166 (36%), Gaps = 1/166 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y++ +I ++T +P ++ L+ + + G+ F+A++ ++Y+G ++V
Sbjct: 5 YIWLAGFVIGVIGIMTNPSPYFAALGLVMCSAATCCILVFGGSTFLAVVLFLIYLGGMLV 64
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F F + + ++ + F+ G + F
Sbjct: 65 VFAFTAALAADPFPEGTLEAAPYEFLILVVLGISLLVAQSWRTCYNFAVGGFNNLKEFLM 124
Query: 129 NNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G +LY+ + + LL+++ + L R R
Sbjct: 125 APTDTSGVSMLYSFGGVMVVVCALALLVTLFVVLELTRGSARGALR 170
>gi|5835231|ref|NP_008275.1|ND6_10703 NADH dehydrogenase subunit 6 [Protopterus dolloi]
gi|1161215|gb|AAC38032.1| NADH dehydrogenase subunit 6 [Protopterus dolloi]
Length = 170
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 40/111 (36%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S F+ ++S V + P ++ L+F G+ + LG F+++I ++Y+G
Sbjct: 2 SFIFFTLLVGFLVSLIGVASNPAPYFAALGLVFGAGIGCGILIWLGNSFLSLILFLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
++V F + + +G + VF
Sbjct: 62 GMLVVFGYSAALAAEPYPGGWEDWSVLLYSLLLLGAGVGIGWAVVGGWDVF 112
>gi|13116563|ref|NP_076842.1| NADH dehydrogenase subunit 6 [Dinornis giganteus]
gi|12957439|gb|AAK07714.1| NADH dehydrogenase subunit 6 [Dinornis giganteus]
Length = 173
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F I+ + V + +P Y V L+ V G L LGA F++++ +VY+G
Sbjct: 2 TYFVLFLGVCFILGALAVASNPSPYYGVLGLVVGSVMGCGWLLSLGASFISLVLFLVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + + G+ + ++ L+V S ++ G +
Sbjct: 62 GMLVVFVYSVSLAADPFPETWGDWRVLGFGAGLVLVVFGGLMVAGSVGVMVGGVGTVDCG 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G VLY+ L ++G+ LLL++ + L+ R R
Sbjct: 122 GMVSVRTDFSGVAVLYSWGGGMLLVAGWGLLLTLFVVLELVRGVSRGAIR 171
>gi|37596437|gb|AAQ94979.1| NADH dehydrogenase subunit 6 [Clytospiza monteiri]
Length = 159
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
Y+G ++V F++ + + + G ++ L++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWADWGVVGYGFGMGLVVVIGLVIGGM 107
>gi|19481550|gb|AAL88847.1|AF407114_1 NADH dehydrogenase subunit 6 [Amandava subflava]
Length = 159
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
Y+G ++V F++ + + + G ++ LIV
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWADWGVVGYGFGMGLVVVIGLIV 104
>gi|195661140|ref|YP_002117865.1| NADH dehydrogenase subunit 6 [Epinephelus coioides]
gi|153973778|gb|ABS54447.1| NADH dehydrogenase subunit 6 [Epinephelus coioides]
Length = 173
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 51/151 (33%), Gaps = 3/151 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F + I+ + V + +P + L+ G+ + G+ F+A+I +
Sbjct: 1 MCFTVVCFLIC---WIVGAIAVASNPSPFFGALGLVMVAGVGCGILVEYGSPFLALILFL 57
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y+G ++V F + + + + ++ A + + +
Sbjct: 58 IYLGGMLVVFAYSAALAAEPYPESWVNPAVVVYMCCYTVVVLAGANMFWYEWTGVLSGSA 117
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGF 151
F +N G + + + G
Sbjct: 118 DEWGPFGIFRADNGGVAVMYSEGGWMLVVGA 148
>gi|37496459|emb|CAD21997.1| NADH dehydrogenase subunit 6 [Elephas maximus]
Length = 175
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 66/169 (39%), Gaps = 10/169 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + ++ + +P+Y SL+ + G+ + G F+ ++ +VY+G ++V
Sbjct: 6 FIMSVLYVVGFIGFSSKPSPVYGGMSLVVSGGLGCGIIMSSGGSFLGLVVFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSAEGELSRL 124
F + M + ++ +IV + + F G S +
Sbjct: 66 VFGYTTAMATEEYPETWGSNVVVLSAFLVGLLMEVFMIVWLFSGEHELVGFYFGGLESFV 125
Query: 125 VFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
E + G LY+ + L ++G++L +S+ A + +
Sbjct: 126 TLGEGGFEYVREDYSGGASLYSYGFWFLAMAGWMLFVSIFIATEITRKR 174
>gi|108793363|ref|YP_637087.1| NADH dehydrogenase subunit 6 [Eudyptes chrysocome]
gi|108755468|dbj|BAE95704.1| NADH dehydrogenase subunit 6 [Eudyptes chrysocome]
Length = 172
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 63/164 (38%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G + LG FVA++ +VY+G ++V
Sbjct: 7 FLGVCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLVSLGVSFVALVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + V G + +LA L V F S V
Sbjct: 67 FVYSVALAADPFPVGWGEWPVVVYGVGLVLVLAIGLGVGGFEGWKFGVNTVDSGGVVPIR 126
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + Y+ ++G+ LLL++ + L+ R R
Sbjct: 127 LDFSGVALFYSCGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|19481554|gb|AAL88849.1|AF407116_1 NADH dehydrogenase subunit 6 [Erythrura gouldiae]
Length = 159
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + G + ++ L+V + ++ E
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWGDWGVVGYGFGMVLVVVVGLVVGGVSGVLVGGETVD 118
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSM 157
+ + VLY++ + G+ LLL++
Sbjct: 119 GGGLLSVRLDFSGVAVLYSEGVGLFLVGGWGLLLTL 154
>gi|208969329|ref|YP_002267968.1| NADH dehydrogenase subunit 6 [Scarus rubroviolaceus]
gi|207081498|gb|ACI23043.1| NADH dehydrogenase subunit 6 [Scarus rubroviolaceus]
Length = 173
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 41/108 (37%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S LF+ ++ V + +P Y+ +L+ GL G F+A++ ++Y+G
Sbjct: 2 SFLVILFTVGMVLGLIGVASNPSPYYAALALVVVAWAGCGLLTSYGGSFLALVLFLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
++V F + + A R G + + + +
Sbjct: 62 GMLVVFAYSSALAAEIYPEAWLRAGPGVAMYLYTFAVVGATLTYLYYW 109
>gi|124027085|ref|YP_001012405.1| hypothetical protein Hbut_0188 [Hyperthermus butylicus DSM 5456]
gi|123977779|gb|ABM80060.1| hypothetical protein Hbut_0188 [Hyperthermus butylicus DSM 5456]
Length = 180
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S+ + +A+ S V R IYS+ L+ + + +F L G ++A+ L +YVG
Sbjct: 14 SVLLGSLATVAV-GSIAAVRARKTIYSILGLVTLALGVSAVFALHGYTYLAVFILAIYVG 72
Query: 65 AVIVFFLFIIMMLD 78
A + ++M+
Sbjct: 73 AGVTLIALVVMVTG 86
>gi|47026793|gb|AAT08604.1| NADH dehydrogenase subunit 6 [Bipes biporus]
Length = 172
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 58/165 (35%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y +++ V P ++ +L A + + + + G F+ ++ L++Y+G ++V
Sbjct: 6 YFLGIGLLLAVIGVAVNPAPYFATGALAVAALFGSAILVWCGGLFLPVVLLLIYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + I ++ + + S + + + + + V
Sbjct: 66 VFAYAIALVPGERAGVYGGWQVWVWVSGLVFVGFCLVELMIGVLDWGRHCISGAFGVTSL 125
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
LYT A+ L + G L + + + L R R
Sbjct: 126 QVDLGGAGGLYTFGAWWLCMCGVCLFVCLFVVLGLSFGGGRGAVR 170
>gi|313676724|ref|YP_004054720.1| NADH/ubiquinone/plastoquinone (complex i) [Marivirga tractuosa DSM
4126]
gi|312943422|gb|ADR22612.1| NADH/Ubiquinone/plastoquinone (complex I) [Marivirga tractuosa DSM
4126]
Length = 762
Score = 36.1 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 44/105 (41%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
F + + +I+ + R+ I ++ SL + + +FL GA +A+ +++
Sbjct: 593 FFELILGLIVLIALGFTLFTRSNISALLSLSVVGIAISIIFLEAGAPDLAITFILIDALT 652
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
+ VF L + + + + R + + G+L ++ +
Sbjct: 653 ITVFVLILHKLPKKMLRKRNSARVRDAIIALGTGLLITLILFSIT 697
>gi|5836070|ref|NP_008054.1|ND6_15105 NADH dehydrogenase subunit 6 [Ornithorhynchus anatinus]
gi|2499295|sp|Q36460|NU6M_ORNAN RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|1469261|emb|CAA58453.1| NADH dehydrogenase subunit 6 [Ornithorhynchus anatinus]
Length = 166
Score = 36.1 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 41/102 (40%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
YL S + ++ + +PIY SL+ + G+ + LG F+ +I +VY+G ++V
Sbjct: 6 YLLSILLVLGFMAFASKPSPIYGGLSLVLSGGVGCGIVVSLGGSFLGLIVFLVYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
F + M + +G+L +
Sbjct: 66 VFGYTAAMATEEYPETWVDSTVFTNLLIMVGMLGVIWYYFSG 107
>gi|73672479|gb|AAZ80420.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672482|gb|AAZ80422.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672485|gb|AAZ80424.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672488|gb|AAZ80426.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672491|gb|AAZ80428.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672494|gb|AAZ80430.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672497|gb|AAZ80432.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672500|gb|AAZ80434.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672503|gb|AAZ80436.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672512|gb|AAZ80442.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672515|gb|AAZ80444.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672518|gb|AAZ80446.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672521|gb|AAZ80448.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672524|gb|AAZ80450.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672527|gb|AAZ80452.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|73672530|gb|AAZ80454.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319558|gb|ABA02924.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319561|gb|ABA02926.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319564|gb|ABA02928.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319567|gb|ABA02930.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319570|gb|ABA02932.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319573|gb|ABA02934.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319576|gb|ABA02936.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319579|gb|ABA02938.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319582|gb|ABA02940.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319585|gb|ABA02942.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319588|gb|ABA02944.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319591|gb|ABA02946.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319594|gb|ABA02948.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319597|gb|ABA02950.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319600|gb|ABA02952.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319603|gb|ABA02954.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319606|gb|ABA02956.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319609|gb|ABA02958.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319612|gb|ABA02960.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319615|gb|ABA02962.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319618|gb|ABA02964.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319621|gb|ABA02966.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319624|gb|ABA02968.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319627|gb|ABA02970.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319630|gb|ABA02972.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319633|gb|ABA02974.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319636|gb|ABA02976.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319639|gb|ABA02978.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319642|gb|ABA02980.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319645|gb|ABA02982.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319648|gb|ABA02984.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319651|gb|ABA02986.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319654|gb|ABA02988.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319657|gb|ABA02990.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319660|gb|ABA02992.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
gi|74319663|gb|ABA02994.1| NADH dehydrogenase subunit 6 [Sitta pygmaea]
Length = 168
Score = 36.1 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 68/164 (41%), Gaps = 2/164 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ + V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 4 MMEFVLF--LGLCFVLGALGVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVSLVLVMV 61
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + G ++A +++ V ++
Sbjct: 62 YLGGMLVVFVYSVSLAADPYPESWGDLGVVGYGLGMGLVVAVGVVIGGGVECVVNSGTVN 121
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ V Y+ A I G+ LLL++ + L+
Sbjct: 122 GEGLSVARTDFGGVAVFYSWGAGLFLIGGWGLLLTLFVVLELVR 165
>gi|1171836|sp|P43194|NU6M_BRABR RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394662|emb|CAA52127.1| NADH dehydrogenase subunit 6 [Brachyramphus brevirostris]
Length = 173
Score = 36.1 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G FL LGA FV+++ +VY+G
Sbjct: 2 TYFVLFLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWFLSLGASFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F +L +++ + +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWQVIGYGMGFAMVLVVGVVIGGFVESWNFGVVTVDSV 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ + ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSWGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|255017319|ref|ZP_05289445.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL F2-515]
Length = 318
Score = 36.1 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 138 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 197
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 198 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 255
>gi|37596445|gb|AAQ94983.1| NADH dehydrogenase subunit 6 [Pytilia hypogrammica]
gi|37596447|gb|AAQ94984.1| NADH dehydrogenase subunit 6 [Pytilia phoenicoptera]
Length = 159
Score = 36.1 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F I+ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFILGGLGVASNPSPYYGVMGLVVAAIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
Y+G ++V F++ + + D F +G++ + A F V + G
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPESWVDWGVVGYGFGMGLVVVVGLAIAGVFGVLTDGGT 116
>gi|37596449|gb|AAQ94985.1| NADH dehydrogenase subunit 6 [Pytilia lineata]
Length = 159
Score = 36.1 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F I+ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFILGGLGVASNPSPYYGVMGLVVAAIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
Y+G ++V F++ + + D F +G++ + A F V + G
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPESWVDWGVVGYGFGMGLVVVVGLAIAGVFGVLTDGGT 116
>gi|237880844|ref|YP_002907502.1| NADH dehydrogenase subunit 6 [Xenomystus nigri]
gi|237648891|dbj|BAH58985.1| NADH dehydrogenase subunit 6 [Xenomystus nigri]
Length = 173
Score = 36.1 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 47/143 (32%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F ++S ++ V + P Y+ F L+ A GL + G F++++ ++Y+G +
Sbjct: 4 LFIVYSVGLMLGLVGVASNPAPYYAAFGLVLAAAAGCGLLVGSGGSFLSLVLFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F + + + ++ L + + S
Sbjct: 64 MVVFAYSAALAAELFPETWGERPVFSYFVIYVVGLVFVGALVYGGWGAESWLSVDEVEGL 123
Query: 127 KGNNVENIGKVLYTQYAYPLEIS 149
E G L + +
Sbjct: 124 SFLRGETWGVGLLYSSGGWMLMI 146
>gi|37596547|gb|AAQ95034.1| NADH dehydrogenase subunit 6 [Taeniopygia bichenovii]
Length = 159
Score = 36.1 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG F++++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFISLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
Y+G ++V F++ + + + G ++ LI+ + ++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWVDWGVVGYGFGMGLVVMVGLIIGGVSGVL 111
>gi|25057240|ref|NP_740177.1| NADH dehydrogenase subunit 6 [Rhyacichthys aspro]
gi|25006206|dbj|BAC23811.1| NADH dehydrogenase subunit 6 [Rhyacichthys aspro]
Length = 173
Score = 36.1 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 47/142 (33%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+F F I+ V + +P ++ L+ G+ + GA F++++ ++Y+G ++V
Sbjct: 7 VFMFGLIMGLVAVASNPSPYFAALGLVVVSGMGCGVLVGHGAPFLSLVLFLIYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + + ++ + + S + F
Sbjct: 67 FAYSAALAAEPYPETLGSRAVALNVGMYLAGVLVAASFFWGGWFNGSWVTVDELVDFSVF 126
Query: 130 NVENIGKVLYTQYAYPLEISGF 151
+ G L + +
Sbjct: 127 RGDMAGVALMYSMGGWMLVVSA 148
>gi|114800094|ref|YP_760221.1| sensor histidine kinase/response regulator [Hyphomonas neptunium
ATCC 15444]
gi|114740268|gb|ABI78393.1| sensor histidine kinase/response regulator [Hyphomonas neptunium
ATCC 15444]
Length = 944
Score = 36.1 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 42/143 (29%), Gaps = 5/143 (3%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
F L A + + V+ +S A + AG + L + Y+ AV
Sbjct: 15 FLLLILWAHVPAL-VLIALQTGHSPLWTALAGMVLAGCYHLSWLRH-GAAPVTRYLSAVA 72
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
+ IM+ + + F + I + + + S + +
Sbjct: 73 LMGEPAIMLFLLTGHTWQMDMHMYFFAMLALTIAWCDWRAIVTGAVAVSLHHLVLLYLLP 132
Query: 128 GNNVE---NIGKVLYTQYAYPLE 147
NIG+V+ +
Sbjct: 133 SAVFSQDGNIGRVILHAGIVIFQ 155
>gi|37596541|gb|AAQ95031.1| NADH dehydrogenase subunit 6 [Poephila cincta]
Length = 159
Score = 36.1 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
Y+G ++V F++ + + + G ++ LIV + ++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWADWGVVGYGFGMGLVVMVGLIVGGVSGVL 111
>gi|288909133|dbj|BAI77363.1| NADH dehydrogenase subunit 6 [Halieutaea stellata]
Length = 173
Score = 36.1 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 65/165 (39%), Gaps = 2/165 (1%)
Query: 11 FSFMAIISSFLVVTVR-NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
F ++ +VV+ +P ++ L+ GL GA F++++ ++Y+G ++V
Sbjct: 7 FLLFGLMGGLMVVSSNPSPYFAALGLVVVAGFGCGLLTGTGAVFLSLVLFLIYLGGMMVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + + L ++ ++ ++ + S F N
Sbjct: 67 FAYSAALAAEPYPEGVGSRPVALLIVMYLFVITIAGVLFGEGWFRDSCLCLEELEEFSLN 126
Query: 130 NVENIGKVLYTQYAYPLE-ISGFILLLSMIGAIVLMLRHRRDIKR 173
+ +G L + + ++ F+L ++++G + + R R
Sbjct: 127 RGDVVGVSLMYEGGGGVLCLAAFVLFVTLLGVLEVSRGLSRGSLR 171
>gi|158508423|ref|YP_001527863.1| NADH dehydrogenase subunit 6 [Strongylocentrotus droebachiensis]
gi|158327677|emb|CAP12682.1| NADH dehydrogenase subunit 6 [Strongylocentrotus droebachiensis]
Length = 165
Score = 36.1 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 8/157 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
YL + + S LV +P YS L+ V+ + LG+ FVA++ L+VY+G ++V
Sbjct: 4 YLTLIVMLFGSTLVFYSLSPYYSALGLVVVSVSGCLVLSFLGSSFVAIVLLLVYMGGMLV 63
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + + + L F + F LV
Sbjct: 64 VFAYSSAISAERFPSVNNLGEVVGLSFLFSSWVFMSFDNFQDLSNTFHCFISGESLVGS- 122
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
Y + + F+LL++++GA+++
Sbjct: 123 -------STFYNSGGVLVILGVFVLLIALVGALIISR 152
>gi|158508409|ref|YP_001527876.1| NADH dehydrogenase subunit 6 [Strongylocentrotus pallidus]
gi|157056837|gb|ABV02426.1| NADH dehydrogenase subunit 6 [Strongylocentrotus droebachiensis]
gi|158327691|emb|CAP12695.1| NADH dehydrogenase subunit 6 [Strongylocentrotus pallidus]
Length = 165
Score = 36.1 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 8/157 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
YL + + S LV +P YS L+ V+ + LG+ FVA++ L+VY+G ++V
Sbjct: 4 YLTLIVMLFGSTLVFYSLSPYYSALGLVVVSVSGCLILSFLGSSFVAIVLLLVYMGGMLV 63
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + + + L F + F LV
Sbjct: 64 VFAYSSAISAERFPSVNNLGEVVGLSFLFSSWVFMSFDNFQDLSNTFYCFVSGESLVGS- 122
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
Y + + F+LL++++GA+++
Sbjct: 123 -------STFYNSGGVLVILGVFVLLIALVGALIISR 152
>gi|145593327|ref|YP_001157624.1| hypothetical protein Strop_0769 [Salinispora tropica CNB-440]
gi|145302664|gb|ABP53246.1| hypothetical protein Strop_0769 [Salinispora tropica CNB-440]
Length = 187
Score = 36.1 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 22/168 (13%), Positives = 66/168 (39%), Gaps = 4/168 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F+ + +A+++ V V + + +SL +F+ LLL +V ++ +++
Sbjct: 1 MVTHVVFWGLAVVAVLAGVAVFVVDSMARASYSLALSFIAVGLQVLLLQQLYVGVLVILM 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
V + + +++ M + ++ + G + + + + A
Sbjct: 61 MVMEMAIMAVYMNMFMGMNPAMMPMNMVHGARHALPVSV----GVFLLLAAGALFAPWPS 116
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
R + +G L + + G ++ ++++ +VL R
Sbjct: 117 RRGSPPDDVTAALGTELMGPKMLAMAVVGAVMAVTIVSGVVLAAHRTR 164
>gi|54112097|ref|YP_122154.1| NADH dehydrogenase subunit 6 [Zaglossus bruijni]
gi|54019669|emb|CAG26340.1| NADH dehydrogenase subunit 6 [Zaglossus bruijni]
Length = 166
Score = 36.1 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 43/103 (41%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F YL S + ++S + +PIY SL+ + G+ + LG F+ +I +VY+G +
Sbjct: 4 FIYLLSIVLVLSFMAFASKPSPIYGGLSLVLSGGVGCGIIVSLGGSFLGLIVFLVYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+V F + M + + +G+L
Sbjct: 64 LVVFGYTAAMATEEYPETWVDNTVVLNLAIMMGMLGVVWYGFF 106
>gi|329896272|ref|ZP_08271428.1| Na+/H+ antiporter MnhB subunit-related protein [gamma
proteobacterium IMCC3088]
gi|328921877|gb|EGG29245.1| Na+/H+ antiporter MnhB subunit-related protein [gamma
proteobacterium IMCC3088]
Length = 324
Score = 36.1 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 38/101 (37%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M ++F + +I++ V+ N +V + + A F LL A VA+ V
Sbjct: 1 MTAVFSIFLLSLLVITAGAVIRATNLFVAVMLMSIFSLLIAVSFFLLDAADVALTEAAVG 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAA 103
G V FL + L + + + GIL A
Sbjct: 61 AGISTVLFLSALAALTEEERKQTSGRIAALISVSITGILIA 101
>gi|37596555|gb|AAQ95038.1| NADH dehydrogenase subunit 6 [Lonchura griseicapilla]
Length = 159
Score = 36.1 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGVCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVCLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
Y+G ++V F++ + + + G ++ L++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWVDWGVVGYGFGMGLVIVIGLLI 104
>gi|2660580|emb|CAA71364.1| NADH dehydrogenase subunit 6 [Luscinia svecica]
Length = 172
Score = 36.1 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+MQ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMQFVLF--LGVCFVLGGLAVASNPSPYYGVLGLVLASVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|89274126|ref|YP_514831.1| NADH dehydrogenase subunit 6 [Taeniopygia guttata]
gi|89146661|gb|ABD62293.1| NADH dehydrogenase subunit 6 [Taeniopygia guttata]
gi|90576922|gb|ABD95516.1| NADH dehydrogenase subunit 6 [Taeniopygia guttata]
gi|90576936|gb|ABD95529.1| NADH dehydrogenase subunit 6 [Taeniopygia guttata]
gi|90576950|gb|ABD95542.1| NADH dehydrogenase subunit 6 [Taeniopygia guttata]
Length = 172
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|77020034|ref|YP_337792.1| NADH dehydrogenase subunit 6 [Saccoglossus kowalevskii]
gi|50511957|gb|AAQ92988.1| NADH dehydrogenase subunit 6 [Saccoglossus kowalevskii]
Length = 159
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 35/68 (51%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ + +V R+P +S L+ A +G+ +L GA FV +I ++Y+G ++V
Sbjct: 3 FVLCSLVFGGGVIVFMSRSPYFSALGLVLATCGLSGVLMLGGAVFVGLILFLMYLGGMLV 62
Query: 69 FFLFIIMM 76
F + +
Sbjct: 63 VFAYSAAL 70
>gi|321463288|gb|EFX74305.1| hypothetical protein DAPPUDRAFT_252060 [Daphnia pulex]
Length = 568
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 6/138 (4%)
Query: 26 RNPIYSVFSLIFAFVNAA--GLFLLL-GAEFVAMITLVVYVGAVIVFFLF--IIMMLDID 80
NPIYS+F I +F A ++ L+ + + ++ YV + +L + ++
Sbjct: 244 TNPIYSIFLFISSFFLVATFAVYALIPEIRNIHGVVIMCYVVSRAAAYLIFGTLQLVGTT 303
Query: 81 IEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYT 140
R + +I +VC + + S + + +GK +
Sbjct: 304 RSTVACRIMAILIHFSYISTYTWLNVVCFDIWWTLKSMQPCSSVNTAIRQNQ-LGKPFFA 362
Query: 141 QYAYPLEISGFILLLSMI 158
Y ++ I+ + +
Sbjct: 363 YSLYSWGLAAVIVTVGQV 380
>gi|25057706|ref|NP_739943.1| NADH dehydrogenase subunit 6 [Parazen pacificus]
gi|25005913|dbj|BAC23539.1| NADH dehydrogenase subunit 6 [Parazen pacificus]
Length = 173
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 61/159 (38%), Gaps = 1/159 (0%)
Query: 16 IISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIM 75
++ V + +P Y+ L+ G+ ++ G F++++ ++Y+G ++V F +
Sbjct: 13 VVGLMGVASNPSPYYAALGLVVVAGAGCGMLMMYGGGFLSLVLFLIYLGGMLVVFAYSAA 72
Query: 76 MLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIG 135
+ A + ++ ++ L + + V S + + G
Sbjct: 73 LAAEPYPEAWGGRAVLGYVIAYVVLVLGALWCVSGEWYVGSWVPVYELKALGVVSGDQGG 132
Query: 136 KVLYTQYAYPLEISGF-ILLLSMIGAIVLMLRHRRDIKR 173
L + P+ + G LLL++ + L+ R R
Sbjct: 133 VALMFSFGGPVLVLGAWALLLTLFVVLELIRGLSRGTLR 171
>gi|116747602|ref|YP_844289.1| hypothetical protein Sfum_0152 [Syntrophobacter fumaroxidans MPOB]
gi|116696666|gb|ABK15854.1| hypothetical protein Sfum_0152 [Syntrophobacter fumaroxidans MPOB]
Length = 592
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 3/125 (2%)
Query: 47 LLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI 106
L L + ++ + ++V + +V+ + + ++ + ++ +G+ I I I
Sbjct: 168 LFLYSSGLSPLMVIVALFSVLGAPVLVSLVRPGRLAPERRKRSLAAMGTICIAIGLYLPI 227
Query: 107 VCASNFMVFSAEGELSRLVFKGNNVENIGKVLY---TQYAYPLEISGFILLLSMIGAIVL 163
LS+ + + Y LE G +LL ++ AIVL
Sbjct: 228 FFILVQTSRRYAPHLSKADPAIYLTHLLNFSFFPLWRAYVTQLEPIGLLLLPFVLAAIVL 287
Query: 164 MLRHR 168
++ R
Sbjct: 288 AIKRR 292
>gi|224483640|gb|ACN51361.1| NADH dehydrogenase subunit 6 [Saxicola rubicola]
Length = 172
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+MQ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMQFVLF--LGVCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
Y+G ++V F++ + + A G ++ ++V
Sbjct: 59 YLGGMLVVFVYSVSLAAEPYPEAWGDWGVVGHGLGMCLVVMVGIMV 104
>gi|60685404|gb|AAX34590.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685409|gb|AAX34594.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685414|gb|AAX34598.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685419|gb|AAX34602.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685424|gb|AAX34606.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685429|gb|AAX34610.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685434|gb|AAX34614.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685439|gb|AAX34618.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685444|gb|AAX34622.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685449|gb|AAX34626.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685454|gb|AAX34630.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685459|gb|AAX34634.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685464|gb|AAX34638.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685469|gb|AAX34642.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685474|gb|AAX34646.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685479|gb|AAX34650.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685484|gb|AAX34654.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685489|gb|AAX34658.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685494|gb|AAX34662.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685499|gb|AAX34666.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685504|gb|AAX34670.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685509|gb|AAX34674.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685514|gb|AAX34678.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685519|gb|AAX34682.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685524|gb|AAX34686.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685529|gb|AAX34690.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685534|gb|AAX34694.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685539|gb|AAX34698.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685544|gb|AAX34702.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685549|gb|AAX34706.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685554|gb|AAX34710.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685559|gb|AAX34714.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685564|gb|AAX34718.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685569|gb|AAX34722.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685574|gb|AAX34726.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685579|gb|AAX34730.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685584|gb|AAX34734.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685589|gb|AAX34738.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685594|gb|AAX34742.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685599|gb|AAX34746.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685604|gb|AAX34750.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685609|gb|AAX34754.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685614|gb|AAX34758.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685619|gb|AAX34762.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685624|gb|AAX34766.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685629|gb|AAX34770.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685634|gb|AAX34774.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685639|gb|AAX34778.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685644|gb|AAX34782.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685649|gb|AAX34786.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685654|gb|AAX34790.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685659|gb|AAX34794.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685664|gb|AAX34798.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685669|gb|AAX34802.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685674|gb|AAX34806.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685679|gb|AAX34810.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685684|gb|AAX34814.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685689|gb|AAX34818.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685694|gb|AAX34822.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685699|gb|AAX34826.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685704|gb|AAX34830.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685709|gb|AAX34834.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685714|gb|AAX34838.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685719|gb|AAX34842.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685724|gb|AAX34846.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685729|gb|AAX34850.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685734|gb|AAX34854.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685739|gb|AAX34858.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685744|gb|AAX34862.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685749|gb|AAX34866.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685754|gb|AAX34870.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685759|gb|AAX34874.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685764|gb|AAX34878.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685769|gb|AAX34882.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685774|gb|AAX34886.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685779|gb|AAX34890.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685784|gb|AAX34894.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685789|gb|AAX34898.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685794|gb|AAX34902.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685799|gb|AAX34906.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685804|gb|AAX34910.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685809|gb|AAX34914.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685814|gb|AAX34918.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685819|gb|AAX34922.1| NADH dehydrogenase subunit 6 [Elephas maximus]
Length = 183
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 69/176 (39%), Gaps = 11/176 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
VM + F + S + ++ + +P+Y SL+ + G+ + G F+ ++ +V
Sbjct: 8 VMMYIVF-IMSVLYVVGFIGFSSKPSPVYGGMSLVVSGGLGCGIIMSSGGSFLGLVVFLV 66
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSA 117
Y+G ++V F + M + ++ +IV + + F
Sbjct: 67 YLGGMMVVFGYTTAMATEEYPETWGSNVVVLSAFLVGLLMEVFMIVWLFSGEHELVGFYF 126
Query: 118 EGELSRLVFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
G S + E + G LY+ + L ++G++L +S+ A + +
Sbjct: 127 GGLESFVTLGEGGFEYVREDYSGGASLYSYGFWFLAMAGWMLFVSIFIATEITRKR 182
>gi|110346915|ref|YP_665734.1| NADH dehydrogenase subunit 6 [Gavialis gangeticus]
gi|82697223|emb|CAH18628.1| NADH dehydrogenase subunit 6 [Gavialis gangeticus]
gi|110083410|dbj|BAE97415.1| NADH dehydrogenase subunit 6 [Gavialis gangeticus]
Length = 175
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 3/172 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ LV Y V SL+FA V ++GL ++ G F+ ++ L++Y+G
Sbjct: 2 EIAFLFLCCLMLVGVVLVAAGATTHYGVVSLLFAAVLSSGLLVVGGGSFMPIVVLLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDI-EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
++V F F + D + E +G G +G++ + ++ +
Sbjct: 62 GLLVVFAFCVGFTDDEYCEFWGTGASKGVAGVCGVGLMVMGYRMYKYTWVGTLGGFLDAV 121
Query: 124 LVFKGN-NVENIGKVL-YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
V+ + + E +G L Y + + +SG+ LL+ + + L+ HRR R
Sbjct: 122 EVWSEDISNELLGVGLFYLEGWVFVALSGWALLIVLFVIMGLVRGHRRGALR 173
>gi|16801539|ref|NP_471807.1| monovalent cation/H+ antiporter subunit A [Listeria innocua
Clip11262]
gi|16414999|emb|CAC97704.1| lin2477 [Listeria innocua Clip11262]
Length = 802
Score = 36.1 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWFSMKTILSIGVGVIITLVSLSAYNTTFYDS 739
>gi|122891712|ref|YP_001004163.1| NADH dehydrogenase subunit 6 [Crocodylus siamensis]
gi|82395897|gb|ABB72524.1| NADH dehydrogenase subunit 6 [Crocodylus porosus]
gi|84682153|gb|ABC60415.1| NADH dehydrogenase subunit 6 [Crocodylus siamensis]
Length = 175
Score = 36.1 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 2/165 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F+L F+ ++S LV + Y V SL+FA + +GL + G F+ ++ L++Y+G
Sbjct: 3 ITFFLLCFLMMVSVVLVASGVTIHYGVVSLLFAAMFGSGLLVAGGGSFMPLVVLLIYLGG 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM--VFSAEGELSR 123
++V F F + D L L + V +
Sbjct: 63 LLVVFAFCVGFTDDKYCEFWGVGGSKVLAYVCGAGLGIGGYCVYDSAWAEVLGCFVDGVE 122
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ E +G L+ + L + LL ++ I++M+R R
Sbjct: 123 AWGDDVSNEFLGVGLFYLSGWGLLVLSGWALLVVLFTIMIMIRGR 167
>gi|108793502|ref|YP_636982.1| NADH dehydrogenase subunit 6 [Aspasma minima]
gi|25006192|dbj|BAC23798.1| NADH dehydrogenase subunit 6 [Aspasma minima]
Length = 173
Score = 36.1 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 47/129 (36%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + +I V +V +P + L+ A + G+ L G F+++I ++Y+G +
Sbjct: 4 IFLVPIGALVIGLVGVASVPSPYFGALGLVLAAGGSCGVLLSQGGTFLSLILFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F + + A LG ++ + +V +
Sbjct: 64 LVVFAYTAAIAADPYPEAWGSLSVCCLGGGYMMGIWVGFMVFKEQWGHAWWTILGESGNL 123
Query: 127 KGNNVENIG 135
+ + +G
Sbjct: 124 FMSCGDTVG 132
>gi|325965048|ref|YP_004242954.1| NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit
Na+/H+ antiporter, Mnhsubunit alpha [Arthrobacter
phenanthrenivorans Sphe3]
gi|323471135|gb|ADX74820.1| NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit
Na+/H+ antiporter, MnhA subunit [Arthrobacter
phenanthrenivorans Sphe3]
Length = 1022
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +I + V +V + A +F L GA +A+ ++V I+
Sbjct: 618 VVGAGIVIGALAAVKANKRFLAVLMVSVTGYGIALMFALQGAPDLALTQMLV---ETIIL 674
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
F++ M + E+ + + + IG+ +V A+ +
Sbjct: 675 VAFVLAMRSLPAELRDRTGGKYRVVRVIIGLCFGITMVVAAIY 717
>gi|255029097|ref|ZP_05301048.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
LO28]
Length = 425
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 245 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 304
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 305 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 362
>gi|70727000|ref|YP_253914.1| monovalent cation/H+ antiporter subunit A [Staphylococcus
haemolyticus JCSC1435]
gi|123734968|sp|Q4L4W7|MNHA1_STAHJ RecName: Full=Na(+)/H(+) antiporter subunit A1; AltName: Full=Mnh
complex subunit A1
gi|68447724|dbj|BAE05308.1| Na+/H+ antiporter, MnhA subunit [Staphylococcus haemolyticus
JCSC1435]
Length = 803
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 20 FLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDI 79
F+VV ++ ++SV L + + LF+ A +A+ VV + +F L + ++
Sbjct: 637 FMVVIAKSRLFSVIMLGVVGYSVSVLFVFFKAPDLALTQFVVESISTALFLLCFYHLPNL 696
Query: 80 DIEVA-EPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
+ K L S +G++ L + A F++ GE
Sbjct: 697 NRYNETRSFKLTNALISIGVGLVVIILGLIAYGNRHFTSIGEY 739
>gi|156142512|gb|ABU52021.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142514|gb|ABU52022.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142516|gb|ABU52023.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142528|gb|ABU52029.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142544|gb|ABU52037.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142550|gb|ABU52040.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142552|gb|ABU52041.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142558|gb|ABU52044.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142560|gb|ABU52045.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142562|gb|ABU52046.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142586|gb|ABU52058.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
Length = 166
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 44/102 (43%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G + LG F++++ ++VY+G ++V
Sbjct: 1 FLGLCFVLGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFISLVLVMVYLGGMLVV 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
F++ + + A G ++A L++ +
Sbjct: 61 FVYSVSLAAEPYPEAWGNFGVVGYGFGMGLVVAVGLVMSGTT 102
>gi|189499068|ref|YP_001958538.1| putative monovalent cation/H+ antiporter subunit A [Chlorobium
phaeobacteroides BS1]
gi|189494509|gb|ACE03057.1| NADH dehydrogenase (quinone) [Chlorobium phaeobacteroides BS1]
Length = 765
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 5 SLFFY--LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
S+ FY +F+ ++S+FL++T R+ + S+ +L + +F++ GA +A+ T +
Sbjct: 594 SITFYEGALAFIILVSTFLLITSRSRLKSIVALGALGFSIGIIFVIYGAPDLALTTFAIE 653
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
VI+F L + + + R L + +G+ ++ A++F
Sbjct: 654 TLNVILFVLVLYRLPRFLKLSRSSNRVRDSLIATCVGVFMTLTVLFATSF 703
>gi|218440022|ref|YP_002378351.1| hypothetical protein PCC7424_3081 [Cyanothece sp. PCC 7424]
gi|218172750|gb|ACK71483.1| hypothetical protein PCC7424_3081 [Cyanothece sp. PCC 7424]
Length = 588
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 11/135 (8%)
Query: 26 RNPIYSV--------FSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
+ P++S+ IF + A LF LG F A++ + + V F
Sbjct: 457 KRPVHSLADLQDSLGILSIFMMLGAGTLFTALGIIFAAILNFGIQLDTVETAFKAAFFFQ 516
Query: 78 DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKV 137
ID + I + L++ + F + L V G +G
Sbjct: 517 MIDSIFS---FFWIPGLLIMIPSYSLILLLTSFAVKDFKMQWNLGFRVIAGGTAIIVGTR 573
Query: 138 LYTQYAYPLEISGFI 152
+ Y IS I
Sbjct: 574 IILSYVLLSLISAII 588
>gi|315504988|ref|YP_004083875.1| hypothetical protein ML5_4222 [Micromonospora sp. L5]
gi|315411607|gb|ADU09724.1| hypothetical protein ML5_4222 [Micromonospora sp. L5]
Length = 187
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 68/168 (40%), Gaps = 4/168 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++ + F+ + +A+++ V V + + ++L +F+ LL+ +V ++T+++
Sbjct: 1 MVTHVVFWALAVVAVLAGAAVFVVDSMARASYALAVSFIAVGLQVLLMQQNYVGVVTILM 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
V + V ++++M + ++ + + + I + V
Sbjct: 61 MVMEMAVMAVYMVMFMGMNPALMPMSMVHDNRHALAVSI----GVFVLLAAGVLLVPWPT 116
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
R + E +G+ L + G ++ ++++ +VL R
Sbjct: 117 RRGAPPVDVTEALGEELMGPKMLVMTGVGAVMAVTIVAGVVLAAHRTR 164
>gi|37596451|gb|AAQ94986.1| NADH dehydrogenase subunit 6 [Pytilia afra]
Length = 159
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F I+ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFILGGLGVASNPSPYYGVMGLVVAAIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
Y+G ++V F++ + + + G ++ L +
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWVDWGVVGYGFGMGLVVVVGLAIAG 106
>gi|326535963|ref|YP_004300405.1| NADH dehydrogenase subunit 6 [Crocodylus johnsoni]
gi|312227691|gb|ADQ52682.1| NADH dehydrogenase subunit 6 [Crocodylus johnsoni]
Length = 175
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 3/171 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F+L + + S LV + Y V SL+FA + +GL + G F+ ++ L++Y+G
Sbjct: 3 ITFFLLCCLMMASVVLVASGVAIHYGVVSLLFAAMFGSGLLAMGGGSFMPLVVLLIYLGG 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
++V F F + D L + + +
Sbjct: 63 LLVVFAFCVGFTDDKYCEFWGAWGSKVSAYVCGVGLGIGGYCVYDSAWAAVLGCFVDAVG 122
Query: 126 FKGNNV--ENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+V E +G L+ + L +SG+ LL+ + + L+ R R
Sbjct: 123 TWSGDVSDEFLGVGLFYSSGWGLLILSGWALLVVLFTIMALVRGRHRGALR 173
>gi|19481586|gb|AAL88865.1|AF407132_1 NADH dehydrogenase subunit 6 [Scaphidura oryzivora]
Length = 159
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGVCFVLGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|288932062|ref|YP_003436122.1| quinone oxidoreductase [Ferroglobus placidus DSM 10642]
gi|288894310|gb|ADC65847.1| quinone oxidoreductase [Ferroglobus placidus DSM 10642]
Length = 150
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 36/108 (33%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M L L S +++ + V R+ YS + + G + LG V + ++
Sbjct: 1 MSDLVVILLSALSVAMALGVAKSRDNFYSALYMSATLLAVGGTYAYLGVHSVLALIAFIF 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
+GAV + + + V F + + + S
Sbjct: 61 IGAVGIITIALAATYRFINPVRHSGYWALFSAFVAVFLGTTLAVFSVS 108
>gi|183601193|ref|ZP_02962686.1| hypothetical protein PROSTU_04825 [Providencia stuartii ATCC 25827]
gi|188019540|gb|EDU57580.1| hypothetical protein PROSTU_04825 [Providencia stuartii ATCC 25827]
Length = 569
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 49/152 (32%), Gaps = 16/152 (10%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPI-------YSVFSLIFAFVN------AAGLF--LLL 49
++F+ FS + I +V N + YS LI A AG+ +L
Sbjct: 19 LIYFWYFSSLLQIY-VVVTGQSNTVGLRDSLLYSTLWLIPALFFPRRIKLVAGIIGIILW 77
Query: 50 GAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+ +A+ VVY + +F++ + + R+ F I I I
Sbjct: 78 LSSVIALAYFVVYGHQISQSVMFVMFETNTNEAGEFLRQYISFKVIAVILIYTLVAIFLW 137
Query: 110 SNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ 141
S + V + G Y +
Sbjct: 138 SRLKPVTMPVSARCGVSLLVLIILFGVPYYNK 169
>gi|37596509|gb|AAQ95015.1| NADH dehydrogenase subunit 6 [Estrilda caerulescens]
Length = 159
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 2/156 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + G ++ L+V ++ E
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWGDLGVVGYGFGMGLVVVVGLVVGGVFGVLVDGETVN 118
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSM 157
S + + VLY++ + G+ LLL++
Sbjct: 119 SVGLSSVRLDFSGVAVLYSEGVGLFLVGGWGLLLTL 154
>gi|1171852|sp|P43208|NU6M_URILO RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394692|emb|CAA52119.1| NADH dehydrogenase subunit 6 [Uria lomvia]
gi|21104314|emb|CAC80356.1| NADH dehydrogenase subunit 6 [Uria lomvia]
Length = 172
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 65/169 (38%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V L LG FV+++ +VY+G
Sbjct: 2 TYFVLFLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCAWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ +L ++V S
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGMGFVAVLVMGMVVGGFECWDLGVVTVDSVG 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+F + Y+ ++G+ LLL++ + L+ R R
Sbjct: 122 MFSVRLDFGGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVRGLTRGAIR 170
>gi|221143482|ref|YP_002519496.1| NADH dehydrogenase subunit 6 [Scarus forsteni]
gi|220961584|gb|ACL93255.1| NADH dehydrogenase subunit 6 [Scarus forsteni]
Length = 173
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 41/108 (37%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S LF+ ++ V + +P Y+ +L+ GL G F+A++ ++Y+G
Sbjct: 2 SFLVILFTVGMVLGLIGVASNPSPYYAALALVVVAWAGCGLLTSYGGSFLALVLFLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
++V F + + A R G + + + +
Sbjct: 62 GMLVVFAYSSALAAEIYPEAWLRAGPGVAMYLYTFAVVGATLTYLYYW 109
>gi|37596545|gb|AAQ95033.1| NADH dehydrogenase subunit 6 [Emblema pictum]
Length = 159
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|25057841|ref|NP_740073.1| NADH dehydrogenase subunit 6 [Caranx melampygus]
gi|25006080|dbj|BAC23694.1| NADH dehydrogenase subunit 6 [Caranx melampygus]
Length = 173
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 48/147 (32%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ YLF F + V + +P ++ L+ G+ + G F++++ ++Y+G
Sbjct: 2 TFIMYLFLFCFVFGLIAVASNPSPYFAALGLVVVAGMGCGVLVGHGGPFLSLVLFLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F + + + ++ I+ + + S
Sbjct: 62 GMLVVFAYSAALAAEPYPETWGSRPVTMYMIAYVLIVVVVSGLFWGGWYESSWGSADELA 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGF 151
F + G L + I
Sbjct: 122 EFSVFRGDMAGVALMYSLGGWMLIISA 148
>gi|313636518|gb|EFS02249.1| Na(+)/H(+) antiporter subunit A [Listeria seeligeri FSL S4-171]
Length = 601
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 421 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 480
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 481 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 538
>gi|269128819|ref|YP_003302189.1| NADH/Ubiquinone/plastoquinone (complex I) [Thermomonospora curvata
DSM 43183]
gi|268313777|gb|ACZ00152.1| NADH/Ubiquinone/plastoquinone (complex I) [Thermomonospora curvata
DSM 43183]
Length = 1040
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 36/100 (36%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + + ++ VR + + L GLF+L GA +A+ LVV +I+
Sbjct: 705 VLGVLVVTAALAATRVRRRLSAALLLSATGYGVVGLFVLHGAPDLALTALVVETLTLIIL 764
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+ + + P R + GI A +
Sbjct: 765 VFVLRRLPEWFPPSRRPLGLRAASTAVSAGIGAFAALFLL 804
>gi|299758257|dbj|BAJ09919.1| NADH dehydrogenase subunit 6 [Stolephorus waitei]
Length = 173
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 41/107 (38%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + F+ I+ V + P Y+ L+ + GA F+A++ ++Y+G +
Sbjct: 4 LFSSWLFLLILGLVAVASNPAPYYAALGLVLVAGAGCAILAGCGASFLAIVLFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM 113
+V F + + A +F++ +A S +
Sbjct: 64 LVVFAYSAALAAEPHPEAWWDVSVLEYVAFYLTCVAVAGGYVYSGWF 110
>gi|194442196|ref|YP_002038856.1| NADH dehydrogenase subunit 6 [Tomistoma schlegelii]
gi|81295137|emb|CAH18641.1| NADH dehydrogenase subunit 6 [Tomistoma schlegelii]
Length = 175
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 3/169 (1%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI 67
F+ S + ++ LV Y V SL+FA +++ GL + G F+ M+ L++Y+G ++
Sbjct: 5 FFALSSLMLVGVVLVSAGATTHYGVISLLFAALSSGGLLAVGGGSFMPMVVLLIYLGGLL 64
Query: 68 VFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFK 127
V F F + D L L + + G +
Sbjct: 65 VVFTFCVGFTDDKYCEFWGVGASKGLVGVCGAGLMVVGYRAYKHMWMGVLGGFSDAVENW 124
Query: 128 GNNV--ENIGKVLYTQYAYPLE-ISGFILLLSMIGAIVLMLRHRRDIKR 173
++ E +G L+ + +SG+ LL+ + + ++ HRR R
Sbjct: 125 SGDISDELLGASLFYLEGWGFVVLSGWALLIVLFTIMSIIRGHRRGALR 173
>gi|215260094|ref|YP_002327452.1| NADH dehydrogenase subunit 6 [Scarus ghobban]
gi|213138614|gb|ACJ45007.1| NADH dehydrogenase subunit 6 [Scarus ghobban]
Length = 173
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 41/108 (37%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S LF+ ++ V + +P Y+ +L+ GL G F+A++ ++Y+G
Sbjct: 2 SFLVILFTVGMVLGLIGVASNPSPYYAALALVVVAWAGCGLLTSYGGSFLALVLFLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
++V F + + A R G + + + +
Sbjct: 62 GMLVVFAYSSALAAEIYPEAWLRAGPGVAMYLYTFAVVGATLTYLYYW 109
>gi|188484473|gb|ACD50862.1| orf37 [Phytophthora ramorum]
Length = 37
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLI 36
M +++FFY FS +A+ S+ V+ N IYS F LI
Sbjct: 1 MNFETIFFYTFSTIALTSAIFVIYSTNTIYSAFFLI 36
>gi|37596469|gb|AAQ94995.1| NADH dehydrogenase subunit 6 [Estrilda erythronotos]
Length = 159
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|37596561|gb|AAQ95041.1| NADH dehydrogenase subunit 6 [Lonchura cantans]
Length = 159
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 63/156 (40%), Gaps = 2/156 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + G ++ L+V ++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWADWGVVGYGFGMGLVVMVGLVVGGVFGVLAGEGMLD 118
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSM 157
+ + VLY+ I G+ LLL++
Sbjct: 119 GAGLLSVRLDSSGVAVLYSHGVGLFLIGGWGLLLTL 154
>gi|280978431|ref|YP_003345357.1| NADH dehydrogenase subunit 6 [Stemonidium hypomelas]
gi|13928182|dbj|BAB47116.1| NADH dehydrogenase subunit 6 [Stemonidium hypomelas]
gi|271280576|dbj|BAI53378.1| NADH dehydrogenase subunit 6 [Stemonidium hypomelas]
Length = 173
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 59/169 (34%), Gaps = 3/169 (1%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +LF + ++ V + P ++ L+ A G+ G FVA++ ++Y+G +
Sbjct: 4 FIFLFLVVLMLGFLGVASNPAPYFAALGLVLATAGGCGILAGFGGSFVALVLFLIYLGGM 63
Query: 67 IVFFLFIIMML--DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+V F + + + +G + L + + + E
Sbjct: 64 LVVFAYSAALAAEPYPESWGDWSVLGYVIGYLLLCGLGVGMFYGGWSDFYYGIVDEYRGF 123
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ I + Y L I + LLL++ + L R R
Sbjct: 124 STLRGDFGGISTIWYLGGG-ALIICAWALLLTLFVVLELTRGRSRGALR 171
>gi|121998814|ref|YP_001003601.1| putative monovalent cation/H+ antiporter subunit A [Halorhodospira
halophila SL1]
gi|121590219|gb|ABM62799.1| multisubunit sodium/proton antiporter, MrpA subunit [Halorhodospira
halophila SL1]
Length = 772
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 42/100 (42%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ + + I S ++ + +V SL A +F+L A + + ++V VI+
Sbjct: 598 WIIAGVLIASVLFACVTQSRLGAVASLGVMGFTVALIFILFSAPDLGITQILVETLTVIL 657
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
L + + ++ R + + +G+L L++
Sbjct: 658 LVLVLFRLPGFMDFSTPQQRVRDGVVAGVMGVLVTSLLLV 697
>gi|301625022|ref|XP_002941795.1| PREDICTED: vomeronasal type-2 receptor 26-like [Xenopus (Silurana)
tropicalis]
Length = 720
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 60/179 (33%), Gaps = 18/179 (10%)
Query: 2 VMQSLFFYLFSFMAIISSFLV-------VTVRNPIYSVFSLIFAFVNAAGLFLLLGAE-- 52
+ ++ F LF +++ V V N S LI + L +G
Sbjct: 464 SLTAIAFILFIAASVVLGIFVKYWETPIVRANNQNLSCLLLISLMLCFLCTLLFIGRPTQ 523
Query: 53 -------FVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAEL 105
+ I + V +V+ L +I+ + ++ +K G + + I+ +
Sbjct: 524 ICCLLRQVIFGIVFTISVSSVLAKTLTVIIAFNATKPGSKLKKYVGTQLAIVLVIICSLG 583
Query: 106 IVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEI--SGFILLLSMIGAIV 162
S + S L F + + + + + I G + LLS I A +
Sbjct: 584 STVISAVWMASHPPFLEADTFSEMDTVILTCNEGSVFFFFCIIGYIGTLALLSFIAAFL 642
>gi|227505925|ref|ZP_03935974.1| CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A
[Corynebacterium striatum ATCC 6940]
gi|227197447|gb|EEI77495.1| CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A
[Corynebacterium striatum ATCC 6940]
Length = 1001
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 60/171 (35%), Gaps = 11/171 (6%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ + + I+ + N + V + + LF L GA +A+ L+V ++V
Sbjct: 611 IVAALIIIVCAVAATVTDNRLSGVIIVGVTGYALSFLFALHGAPDLALTQLLV-ETIIMV 669
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F+ ++ + + E + K +G+ L V +A F
Sbjct: 670 LFMLVLRRMPANTEWKQDPKMGRLRAWLAVGV---GLTVTLVGMFAINARRSNPISEFMP 726
Query: 129 NNVENIGKVLYTQYAYPLEISG-------FILLLSMIGAIVLMLRHRRDIK 172
+ IG T +++ +L+++ G L+ R + +
Sbjct: 727 ELAKEIGHGANTVNVLLVDLRAWDTFGEITVLVIAATGIASLIYRTQSFTR 777
>gi|197263590|ref|ZP_03163664.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197241845|gb|EDY24465.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
Length = 577
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVIL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|49616800|ref|YP_044776.1| NADH dehydrogenase subunit 6 [Smaug warreni]
gi|49256956|dbj|BAD24761.1| NADH dehydrogenase subunit 6 [Smaug warreni]
Length = 172
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 58/166 (34%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
I+ V + P Y V L+++ + + +L G F++++ ++Y+G ++V
Sbjct: 6 IFLGLCFIVGVVSVASNPAPYYGVVGLVWSALVGCCVLVLSGVSFLSLVLFMIYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + + + +G++ F +
Sbjct: 66 VFAYSVALASEPYPETWGNFGVMVHFLGGMGLVFVLAWWYLEGFNFDGLGAVEVLGLSMV 125
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQ 174
+LY+ + L + G LLL++ + + RR R+
Sbjct: 126 RVDLGGSVMLYSWGGWCLWLCGVSLLLALFVVLEVASGGRRGGLRE 171
>gi|37596471|gb|AAQ94996.1| NADH dehydrogenase subunit 6 [Estrilda quartinia kilimensis]
gi|37596473|gb|AAQ94997.1| NADH dehydrogenase subunit 6 [Estrilda melanotis]
Length = 159
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|310007463|gb|ADP00773.1| NADH dehydrogenase subunit 6 [Dicentrarchus punctatus]
Length = 172
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 63/170 (37%), Gaps = 4/170 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M+ F+L F I+S V +P Y F L+ + + G F+A+I ++
Sbjct: 1 MMTYVACFFLGGF--ILSMVAVACNPSPFYGAFGLVAVAGFGCAVVVGSGGTFLALILVM 58
Query: 61 VYVGAVIVFFLFIIMML--DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
+YVGA++V F++ + G I+A + +
Sbjct: 59 IYVGAMLVVFVYSAALAADRYPESWGTGGVAGQAGGYLLGLIVAFSFFWKEEYGVSWDYG 118
Query: 119 GELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
G + + ++ + + + + +G +LL + V L HR
Sbjct: 119 GGVEEGASQRGDISGVSWMYSSGGPLLVISAGALLLTLFVVFEVTRLLHR 168
>gi|301353270|ref|YP_003795347.1| NADH dehydrogenase subunit 6 [Pseudopodoces humilis]
gi|301016353|gb|ADK47637.1| NADH dehydrogenase subunit 6 [Pseudopodoces humilis]
Length = 172
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+MQ + F I+ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMQFVLF--LGVCFILGGLAVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
Y+G ++V F++ + + A G ++ ++V
Sbjct: 59 YLGGMLVVFVYSVSLAAEPYPEAWGDWGVVGHGLGMCLVVMVGIMV 104
>gi|157736045|ref|YP_001491498.1| NADH dehydrogenase subunit 6 [Centropyge loricula]
gi|157679356|dbj|BAF80413.1| NADH dehydrogenase subunit 6 [Centropyge loricula]
Length = 172
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 40/112 (35%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
LFS + V + +P ++ L+ GL LG F++MI ++Y+G ++V
Sbjct: 6 ILFSVGLVSGLVAVASNPSPYFAALGLVVVSGFGCGLLAALGGSFLSMILFLIYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
F + + + + G+ I+ + E
Sbjct: 66 VFAYSAALAAEPFPETWGHETVVAYIYMYFGVSYCLSILFGLVWSSLEMSVE 117
>gi|154125715|ref|YP_001382258.1| NADH dehydrogenase subunit 6 [Anas platyrhynchos]
gi|151327685|gb|ABS00283.1| NADH dehydrogenase subunit 6 [Anas platyrhynchos]
gi|189342984|gb|ACD92015.1| NADH dehydrogenase subunit 6 [Anas platyrhynchos]
gi|189342998|gb|ACD92028.1| NADH dehydrogenase subunit 6 [Anas platyrhynchos]
gi|198387241|gb|ACH87083.1| NADH dehydrogenase subunit 6 [Anas platyrhynchos]
gi|291464811|gb|ADE05889.1| NADH dehydrogenase subunit 6 [Anas platyrhynchos]
Length = 173
Score = 35.8 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G L LG FVA++ +VY+G
Sbjct: 2 TYFVFFLGICFVVGVLGVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + + ++ L++ + +
Sbjct: 62 GMLVVFVYSVALAAEPFPEAWGDWRVVGHAAALAAVVLGGLVLGGFVGSWGLGVVTVDSV 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G +LY++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFTVRLDFSGVAMLYSRGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|156060229|ref|XP_001596037.1| hypothetical protein SS1G_02253 [Sclerotinia sclerotiorum 1980]
gi|154699661|gb|EDN99399.1| hypothetical protein SS1G_02253 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 593
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 20/170 (11%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSL--IFAF---VNAAGLFLLLGAEFVAMITLVVY 62
F +F I +F P+ S FS+ + AF + +AGL+ L VA + +
Sbjct: 43 FASTAFPLIAGTFG------PMASAFSICALVAFYYAIFSAGLYFL-----VASLMTITV 91
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
GA + + + + A + + + L+
Sbjct: 92 YGAHKGHYPKEFKLTMSQRTLMLQTISFIVYLLAGAAVFAHIESWQYLDAVYWCDFTLLT 151
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
+ + ++G+ L +P I G I+L +IG+I ++ R +K
Sbjct: 152 VGIGDYAPMTHLGRSL----LFPFAIGGIIILGLVIGSIRSLVLDRGKVK 197
>gi|198244995|ref|YP_002218047.1| hypothetical protein SeD_A4523 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|207859308|ref|YP_002245959.1| hypothetical protein SEN3913 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|197939511|gb|ACH76844.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|206711111|emb|CAR35485.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326625839|gb|EGE32184.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
Length = 577
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|330684216|gb|EGG95958.1| monovalent cation/H+ antiporter subunit A [Staphylococcus
epidermidis VCU121]
Length = 807
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 39/97 (40%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
+ +I+SFL++ ++ ++S+ L + + LF+ A +A+ VV + +F L
Sbjct: 630 VLLVIASFLIIFAKSRLFSIIMLSAVGYSVSVLFIFFKAPDLALTQFVVESISTALFLLC 689
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+ +++ K L ++
Sbjct: 690 FYFLPNLNRYNETRSFKVTNALISAGVGLVVTILGLI 726
>gi|224483634|gb|ACN51358.1| NADH dehydrogenase subunit 6 [Saxicola torquata axillaris]
gi|224483636|gb|ACN51359.1| NADH dehydrogenase subunit 6 [Saxicola torquata axillaris]
Length = 172
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 22/141 (15%), Positives = 52/141 (36%), Gaps = 3/141 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+MQ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMQFVLF--LGVCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + + ++ + G +
Sbjct: 59 YLGGMLVVFVYSVSLA-AEPYPEAWGDWGVVGRGLGMCLVVMVGFMVGGGMDSLVDGGTV 117
Query: 122 SRLVFKGNNVENIGKVLYTQY 142
++ G + +
Sbjct: 118 DNGGLSSVRLDFTGVAVLYSW 138
>gi|108793404|ref|YP_636943.1| NADH dehydrogenase subunit 6 [Diretmus argenteus]
gi|25005829|dbj|BAC23461.1| NADH dehydrogenase subunit 6 [Diretmus argenteus]
Length = 171
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 3/110 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M M +FF + +VV + Y+ LIF V +G G F+ + +
Sbjct: 1 MPMLEIFFV---SGVLFGMLMVVCTSSTYYASLGLIFVCVLGSGAVCCSGGVFLCLALAL 57
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
+Y+ ++V F+F + E L + +
Sbjct: 58 IYLAGMLVVFIFCTALSPEAYPEDEGSSWNMNLVAMVGIFWVVTCFFWSW 107
>gi|156142530|gb|ABU52030.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
Length = 166
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 43/102 (42%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G + LG F++++ ++VY+G ++V
Sbjct: 1 FLGLCFVLGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFISLVLVMVYLGGMLVV 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
F++ + + A G ++A L++
Sbjct: 61 FVYSVSLAAEPYPEAWGNFGVVGYGFGMGLVVAVGLVMSGMT 102
>gi|119952253|ref|YP_950478.1| polyprotein [Sepik virus]
gi|112818957|gb|ABI23562.1| polyprotein [Sepik virus]
Length = 3405
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLI---FAFVNAAGLFLLLGAEFVAMI 57
M+ +++ +L + II + +V +F L + ++ A + +L+ A +++
Sbjct: 2148 MMPEAVTIFLLIMLTIICTSGIV--------MFFLAPKGLSRMSMAMMTMLVSAYLMSLG 2199
Query: 58 TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+ + ++ FI M++ I + L +G+++ L+V A
Sbjct: 2200 GMNPVQVSCVMLVFFIFMVVLIPEPGTQRSTYDNQLIYLLVGVMSVILMVTA 2251
>gi|37596519|gb|AAQ95020.1| NADH dehydrogenase subunit 6 [Parmoptila jamesoni]
Length = 160
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|299758243|dbj|BAJ09909.1| NADH dehydrogenase subunit 6 [Stolephorus chinensis]
Length = 173
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 41/107 (38%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + F+ I+ V + P Y+ L+ + GA F+A++ ++Y+G +
Sbjct: 4 LFSSWLFLLILGLVAVASNPAPYYAALGLVLVAGAGCAILAGCGASFLAIVLFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM 113
+V F + + A +F++ +A S +
Sbjct: 64 LVVFAYSAALAAEPHPEAWWDVSVLEYVAFYLTCVAVAGGYVYSGWF 110
>gi|146411789|gb|ABI54479.1| polyprotein [Sepik virus]
Length = 3405
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLI---FAFVNAAGLFLLLGAEFVAMI 57
M+ +++ +L + II + +V +F L + ++ A + +L+ A +++
Sbjct: 2148 MMPEAVTIFLLIMLTIICTSGIV--------MFFLAPKGLSRMSMAMMTMLVSAYLMSLG 2199
Query: 58 TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+ + ++ FI M++ I + L +G+++ L+V A
Sbjct: 2200 GMNPVQVSCVMLVFFIFMVVLIPEPGTQRSTYDNQLIYLLVGVMSVILMVTA 2251
>gi|90576908|gb|ABD95503.1| NADH dehydrogenase subunit 6 [Taeniopygia guttata]
Length = 172
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|32567793|ref|NP_075031.2| NADH dehydrogenase subunit 6 [Candida albicans SC5314]
gi|74638326|sp|Q9B8D7|NU6M_CANAL RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|32567805|gb|AAG59588.2|AF285261_1 NADH dehydrogenase subunit 6 [Candida albicans SC5314]
Length = 146
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
S ++ I+S L + + +P+ S+ +LI FV A G + ++ ++VYVGA+ + FL
Sbjct: 2 SLISGIASILAIGLLSPVQSILALILLFVTVAINLYTSGYVLMGILYILVYVGAIAILFL 61
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
FI+ +L+I+ G ++ LI + F + + N +
Sbjct: 62 FILSLLNIE---------YKPTGGMHPLVIVLILIPLIPLDIAFEPIAIVESVSTTYNEL 112
Query: 132 ENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+G + Y++YA L I G IL++S+IGAI +
Sbjct: 113 SIVGTLFYSEYAPMLVIIGIILIVSVIGAIAMTR 146
>gi|15888247|ref|NP_353928.1| putative monovalent cation/H+ antiporter subunit A [Agrobacterium
tumefaciens str. C58]
gi|15155903|gb|AAK86713.1| Na+/H+ antiporter [Agrobacterium tumefaciens str. C58]
Length = 789
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + L F + +A+ V+T + + ++ +L A +FLL GA ++ +
Sbjct: 604 MPIHELTFIV---IAVAGLLAVLTASSRLTAIIALGIQGFAVAVIFLLFGAPDLSFTQFM 660
Query: 61 VYVGAVIVFFLFIIMM 76
V +V++ L + +
Sbjct: 661 VETLSVVILTLVMTRL 676
>gi|310766938|gb|ADP11888.1| hypothetical protein EJP617_22070 [Erwinia sp. Ejp617]
Length = 793
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 15/168 (8%)
Query: 32 VFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRG 91
+ L F +GL+LL+G ++A + +Y V L +L
Sbjct: 9 LILLTVIFAALSGLYLLIGGIWLAKLGGSLYYIIAGVVLLITAFLLHR-----RRGAALL 63
Query: 92 FLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGF 151
F +G L S+F + +++ + + I + L T+ +P
Sbjct: 64 LYALFLLGTTVWSLWEVGSDFWALTPRLDVTFFLGLWLALPFIWRELNTKGVFPRVALSA 123
Query: 152 ILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKSGKGI 199
+L+ ++ VL D Q+I+ L S+ + V + +G+
Sbjct: 124 VLVFAVA---VLAYSVFNDP--QEINGTLNSDRAAA-----VPAEEGV 161
>gi|54399544|gb|AAV34159.1| polyprotein [Sepik virus]
Length = 3405
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLI---FAFVNAAGLFLLLGAEFVAMI 57
M+ +++ +L + II + +V +F L + ++ A + +L+ A +++
Sbjct: 2148 MMPEAVTIFLLIMLTIICTSGIV--------MFFLAPKGLSRMSMAMMTMLVSAYLMSLG 2199
Query: 58 TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
+ + ++ FI M++ I + L +G+++ L+V A
Sbjct: 2200 GMNPVQVSCVMLVFFIFMVVLIPEPGTQRSTYDNQLIYLLVGVMSVILMVTA 2251
>gi|164519191|ref|YP_001648875.1| NADH dehydrogenase subunit 6 [Microhyla okinavensis]
gi|164454437|dbj|BAF96775.1| NADH dehydrogenase subunit 6 [Microhyla okinavensis]
Length = 166
Score = 35.8 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 52/150 (34%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
F + ++ V + +P Y+ L+ + + + G F++++ +VY+G ++V
Sbjct: 2 FFEVVLLVGFVAVASNPSPYYAALGLVIGAGSGCLMLINEGMTFLSLVLFLVYLGGMMVV 61
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + ++ A S ++ +L ++ F+ E+ L
Sbjct: 62 FAYSAALVAEPYPEAWGSVWVLSYISSYLVVLFVGWLLWGEYFVKEKIINEVMDLGGGLV 121
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIG 159
+ V +LL +
Sbjct: 122 EWWGVSGVFAEGGWVLFVGGWALLLTLFVA 151
>gi|116672415|ref|YP_833348.1| putative monovalent cation/H+ antiporter subunit A [Arthrobacter
sp. FB24]
gi|116612524|gb|ABK05248.1| multisubunit sodium/proton antiporter, MrpA subunit / multisubunit
sodium/proton antiporter, MrpB subunit [Arthrobacter sp.
FB24]
Length = 1014
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ +I + V +V + A +F L GA +A+ ++V I+
Sbjct: 629 VAGAGIVIGALAAVRANKRFLAVLMVSVTGYGIALMFALQGAPDLALTQMLV---ETIIL 685
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
F++ M + E+ + + + IG ++ + +
Sbjct: 686 VAFVLAMRSLPAELRDRTGGKYRVIRVIIGAAFGVTMIFVAIY 728
>gi|205374697|ref|ZP_03227491.1| monovalent cation/H+ antiporter subunit A [Bacillus coahuilensis
m4-4]
Length = 798
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + + ++ + ++ ++ + ++ +L + A F+L A +A+ L++ +V +F
Sbjct: 631 VLAVILVLGTVTILFAKSRLTAIIALGSVGYSVALFFVLFKAPDLALTQLLIETVSVALF 690
Query: 70 FLFIIMMLDIDIEVAEPRKKRG-FLGSFFIGILAAELIVCASNFMVFSAEGEL 121
L + + K G L S +G+L + + + + +F + E
Sbjct: 691 LLCFYHLPRLSRHEERTSFKFGNLLISAAVGVLVTLISIASHSQKMFPSISEY 743
>gi|238550633|gb|ACR44481.1| NADH dehydrogenase subunit 6 [Perdix dauurica]
Length = 173
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 64/170 (37%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++S V + +P Y V L+ A V G + LG F+++ +VY+G
Sbjct: 2 TYFVIFLGVSFVLSVLAVASNPSPYYGVVGLVLAAVAGCGWLVNLGVSFISLALFLVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ I+ +
Sbjct: 62 GMLVVFVYSVSLAADPYPEAWGDWRVIGYGLGFVLVVCVGAILGGLTDFWKVGVITVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ + G+ LLL++ + L+ R R
Sbjct: 122 GVSFVRLDFSGVAMFYSCGVGLFLVGGWGLLLALFVVLELVRGLSRGAIR 171
>gi|238917387|ref|YP_002930904.1| Cu2+-exporting ATPase [Eubacterium eligens ATCC 27750]
gi|238872747|gb|ACR72457.1| Cu2+-exporting ATPase [Eubacterium eligens ATCC 27750]
Length = 847
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 44/149 (29%), Gaps = 7/149 (4%)
Query: 23 VTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIE 82
V + SV LI + +G V G + L +++ I +
Sbjct: 88 VLKKRLTASVIFLIVLM------YFSMGHMMWGWPLPSVLEGNHVAMGLIQMLLTIIIMV 141
Query: 83 VAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQY 142
+ + GF G L+ S + L + + G + Y
Sbjct: 142 INQHFFISGFKGLLHRSPNMDTLVALGSGAAFVWSTYALFAMTDCQVRGDMAGVMHYMD- 200
Query: 143 AYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ E + IL L +G ++ +
Sbjct: 201 EFYFESAAMILTLITVGKMLEARSKGKTT 229
>gi|37596521|gb|AAQ95021.1| NADH dehydrogenase subunit 6 [Nesocharis shelleyi]
Length = 159
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|19481552|gb|AAL88848.1|AF407115_1 NADH dehydrogenase subunit 6 [Lagonosticta sanguinodorsalis]
gi|37596425|gb|AAQ94973.1| NADH dehydrogenase subunit 6 [Lagonosticta rhodopareia jamesoni]
Length = 159
Score = 35.8 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVIGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|40388207|gb|AAQ91105.1| NADH dehydrogenase subunit 6 [Acanthisitta chloris]
Length = 173
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F S I+ V + +P Y V L+ V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLFLSLCFILGGLAVASSPSPYYGVVGLVLGAVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + G+ + +L ++ +
Sbjct: 62 GMLVVFVYSVSLAADPFPEGWGDWGVVSRGAGLVVVLGVGVVGGGLAXCWKFGAEVVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLML 165
++ G L+ ++G+ LLL++ + L+
Sbjct: 122 GXVLVRLDFGGVALFYSCGVGMFLVAGWGLLLTLFVVLELVR 163
>gi|47095857|ref|ZP_00233461.1| Na+/H+ antiporter component A, putative [Listeria monocytogenes
str. 1/2a F6854]
gi|47015734|gb|EAL06663.1| Na+/H+ antiporter component A, putative [Listeria monocytogenes
str. 1/2a F6854]
Length = 789
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 609 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 668
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 669 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 726
>gi|156142546|gb|ABU52038.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142588|gb|ABU52059.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142590|gb|ABU52060.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
Length = 166
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 44/101 (43%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G + LG F++++ ++VY+G ++V
Sbjct: 1 FLGLCFVLGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFISLVLVMVYLGGMLVV 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
F++ + + A G ++A L++ +
Sbjct: 61 FVYSVSLAAEPYPEAWGNFGVVGYGFGMGLVVAVGLVMSGT 101
>gi|145296727|ref|YP_001139548.1| putative monovalent cation/H+ antiporter subunit A [Corynebacterium
glutamicum R]
gi|140846647|dbj|BAF55646.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 1019
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 12/150 (8%)
Query: 31 SVFSLI-FAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKK 89
S L+ A +F L GA +A+ ++V IV +F++++ + EVA +
Sbjct: 635 SALILVGVTGYGIAVIFALHGAPDLALTQVLV---ETIVMVVFMLVLRKMPTEVAWKAEP 691
Query: 90 RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEIS 149
+ ++ +V + F + + E V+ + IG T +++
Sbjct: 692 KQSRVRAWLAGATGLSVVIVTIFAMNARTTE-PISVYMQDLAYEIGHGANTVNVLLVDLR 750
Query: 150 GF-------ILLLSMIGAIVLMLRHRRDIK 172
GF +L+++ G L+ R+R K
Sbjct: 751 GFDTFGEISVLVIAATGIASLVYRNRSFRK 780
>gi|3600008|gb|AAC35512.1| NADH dehydrogenase subunit VI [Rhea americana]
Length = 175
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 68/173 (39%), Gaps = 1/173 (0%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M S F + I+ + V + +P Y + L+ + G L LG F++++ +V
Sbjct: 1 MMTSYFVFFMGVSFILGALAVASNPSPYYGLLGLVVGSLVGCGWLLSLGVSFISLVLFLV 60
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + A + + ++ ++V +
Sbjct: 61 YLGGMLVVFVYSVSLAADPFPEAWGDWRVLGYSGGLLLVVLVGVVVGGGMGSELWGVNTV 120
Query: 122 SRLVFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ + I+G+ LLL++ + L+ R R
Sbjct: 121 DSEGAVLVRMDFSGVAVFYSWGAGLFLIAGWGLLLTLFVVLELVRGLSRGAIR 173
>gi|27819327|ref|NP_777301.1| NADH dehydrogenase subunit 6 [Eudyptula minor]
gi|27764475|gb|AAO23039.1|AF362763_13 NADH dehydrogenase subunit 6 [Eudyptula minor]
Length = 172
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 61/164 (37%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 7 FLGVCFVLGGLAVASNPSPYYGVIGLVLASVMGCGWLLSLGVSFVSLVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + I +L L V F S V
Sbjct: 67 FVYSVALAADPFPEGWGEWPVVVYSVGLILVLGVGLGVGEFGGWKFGLSTVDSEGVMSVR 126
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + Y+ A ++G+ LLL++ + L+ R R
Sbjct: 127 LDFSGVALFYSYGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|204930295|ref|ZP_03221272.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204320699|gb|EDZ05901.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 577
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|122056419|gb|ABM66076.1| NADH dehydrogenase subunit 6 [Cygnus buccinator]
gi|122056421|gb|ABM66077.1| NADH dehydrogenase subunit 6 [Cygnus buccinator]
gi|122056423|gb|ABM66078.1| NADH dehydrogenase subunit 6 [Cygnus buccinator]
gi|122056425|gb|ABM66079.1| NADH dehydrogenase subunit 6 [Cygnus buccinator]
gi|122056427|gb|ABM66080.1| NADH dehydrogenase subunit 6 [Cygnus buccinator]
gi|122056429|gb|ABM66081.1| NADH dehydrogenase subunit 6 [Cygnus buccinator]
gi|122056431|gb|ABM66082.1| NADH dehydrogenase subunit 6 [Cygnus buccinator]
gi|122056433|gb|ABM66083.1| NADH dehydrogenase subunit 6 [Cygnus buccinator]
gi|122056435|gb|ABM66084.1| NADH dehydrogenase subunit 6 [Cygnus buccinator]
Length = 172
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G L LG FVA++ +VY+G
Sbjct: 1 AYFMFFLGICFMVGVLGVASNPSPYYGVVGLVLASVAGCGWLLGLGVSFVALVLFMVYLG 60
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + + F+ ++ L+ ++ +
Sbjct: 61 GMLVVFVYSVALAAEPFPEAWGDWRVIGYAAAFVAVVFVGLVFGGFMGPWKFGVVTVNNV 120
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G + Y+ A ++G+ LLL++ + L+ R R
Sbjct: 121 GLSVIRLDFSGVSMFYSHGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|47092963|ref|ZP_00230743.1| Na+/H+ antiporter component A, putative [Listeria monocytogenes
str. 4b H7858]
gi|47018617|gb|EAL09370.1| Na+/H+ antiporter component A, putative [Listeria monocytogenes
str. 4b H7858]
Length = 789
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 609 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 668
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 669 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 726
>gi|5835945|ref|NP_008711.1|ND6_15091 NADH dehydrogenase subunit 6 [Aythya americana]
gi|4887672|gb|AAD32264.1|AF090337_13 NADH dehydrogenase subunit 6 [Aythya americana]
Length = 173
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 71/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G L LG FVA++ +VY+G
Sbjct: 2 TYFVFFLGVCFVVGVLGVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + + + ++ A L++ + +
Sbjct: 62 GMLVVFVYSVALAAEPFPEAWGDWRVAGYAAALVAVVLAGLVLGGFVGSWGFGVVTVDSV 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G +LY++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFTVRLDFSGVAMLYSRGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|62182578|ref|YP_218995.1| hypothetical protein SC4008 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62130211|gb|AAX67914.1| putative Integral membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 577
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|16762324|ref|NP_457941.1| hypothetical protein STY3755 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16767383|ref|NP_462998.1| hypothetical protein STM4118 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29143812|ref|NP_807154.1| hypothetical protein t3506 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161617261|ref|YP_001591226.1| hypothetical protein SPAB_05102 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167991698|ref|ZP_02572797.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168233059|ref|ZP_02658117.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168237740|ref|ZP_02662798.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168244125|ref|ZP_02669057.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168262971|ref|ZP_02684944.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168467469|ref|ZP_02701306.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168821531|ref|ZP_02833531.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194449087|ref|YP_002048117.1| hypothetical protein SeHA_C4446 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470259|ref|ZP_03076243.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194734095|ref|YP_002117032.1| hypothetical protein SeSA_A4328 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197251476|ref|YP_002149041.1| hypothetical protein SeAg_B4359 [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|213052154|ref|ZP_03345032.1| hypothetical protein Salmoneentericaenterica_03997 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213427053|ref|ZP_03359803.1| hypothetical protein SentesTyphi_16460 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213646881|ref|ZP_03376934.1| hypothetical protein SentesTy_05984 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|224585932|ref|YP_002639731.1| hypothetical protein SPC_4227 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912259|ref|ZP_04656096.1| hypothetical protein SentesTe_14156 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|81571841|sp|Q7CPC0|CPTA_SALTY RecName: Full=Phosphoethanolamine transferase CptA
gi|25512557|pir||AE0936 probable membrane protein STY3755 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16422685|gb|AAL22957.1| putative integral membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16504628|emb|CAD09511.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139447|gb|AAO71014.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|161366625|gb|ABX70393.1| hypothetical protein SPAB_05102 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194407391|gb|ACF67610.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194456623|gb|EDX45462.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194709597|gb|ACF88818.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195630137|gb|EDX48777.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197215179|gb|ACH52576.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197289429|gb|EDY28794.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|205330012|gb|EDZ16776.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205332826|gb|EDZ19590.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205336846|gb|EDZ23610.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205341867|gb|EDZ28631.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205348097|gb|EDZ34728.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|224470460|gb|ACN48290.1| hypothetical protein SPC_4227 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261249234|emb|CBG27096.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267996423|gb|ACY91308.1| hypothetical protein STM14_4952 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160625|emb|CBW20156.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312915235|dbj|BAJ39209.1| hypothetical protein STMDT12_C42660 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320088523|emb|CBY98282.1| UPF0141 membrane protein yijP [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322613127|gb|EFY10071.1| hypothetical protein SEEM315_17520 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619245|gb|EFY16128.1| hypothetical protein SEEM971_21169 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322626111|gb|EFY22923.1| hypothetical protein SEEM973_22100 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626429|gb|EFY23235.1| hypothetical protein SEEM974_14368 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632457|gb|EFY29205.1| hypothetical protein SEEM201_19027 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635060|gb|EFY31781.1| hypothetical protein SEEM202_17121 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642737|gb|EFY39327.1| hypothetical protein SEEM954_08922 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322646438|gb|EFY42949.1| hypothetical protein SEEM054_07501 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322648547|gb|EFY44997.1| hypothetical protein SEEM675_07096 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322657275|gb|EFY53555.1| hypothetical protein SEEM19N_14797 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662238|gb|EFY58453.1| hypothetical protein SEEM801_05878 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666771|gb|EFY62947.1| hypothetical protein SEEM507_05643 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672044|gb|EFY68159.1| hypothetical protein SEEM877_04290 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675765|gb|EFY71837.1| hypothetical protein SEEM867_04333 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681819|gb|EFY77845.1| hypothetical protein SEEM180_14082 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322683986|gb|EFY79995.1| hypothetical protein SEEM600_14504 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323132464|gb|ADX19894.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|323193257|gb|EFZ78472.1| hypothetical protein SEEM581_19323 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197615|gb|EFZ82748.1| hypothetical protein SEEM501_14621 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323200811|gb|EFZ85882.1| hypothetical protein SEEM460_15270 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207184|gb|EFZ92136.1| hypothetical protein SEEM020_16315 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211386|gb|EFZ96227.1| hypothetical protein SEEM6152_00065 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218569|gb|EGA03277.1| hypothetical protein SEEM0077_09165 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323220949|gb|EGA05381.1| hypothetical protein SEEM0047_13694 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226054|gb|EGA10272.1| hypothetical protein SEEM0055_08519 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231605|gb|EGA15717.1| hypothetical protein SEEM0052_06055 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236913|gb|EGA20984.1| hypothetical protein SEEM3312_10079 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239433|gb|EGA23482.1| hypothetical protein SEEM5258_18522 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243974|gb|EGA27985.1| hypothetical protein SEEM1156_17972 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249337|gb|EGA33254.1| hypothetical protein SEEM9199_02527 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250420|gb|EGA34303.1| hypothetical protein SEEM8282_08137 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258874|gb|EGA42526.1| hypothetical protein SEEM8283_01222 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260898|gb|EGA44498.1| hypothetical protein SEEM8284_13834 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265238|gb|EGA48735.1| hypothetical protein SEEM8285_16957 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270460|gb|EGA53906.1| hypothetical protein SEEM8287_12493 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|332990947|gb|AEF09930.1| hypothetical protein STMUK_4103 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 577
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|321225411|gb|EFX50469.1| UPF0141 membrane protein YijP [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
Length = 577
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|313622592|gb|EFR92984.1| Na(+)/H(+) antiporter subunit A [Listeria innocua FSL J1-023]
Length = 802
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|238550689|gb|ACR44533.1| NADH dehydrogenase subunit 6 [Bonasa bonasia]
Length = 173
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G + LG F++++ ++Y+G
Sbjct: 2 TYFVIFLGVSFMLGVLAVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFISLVLFMIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ A ++ + +
Sbjct: 62 GMLVVFVYSVSLAADPYPEAWGDWRVVGYGLGFVFVVCAGAVMGGLIDLWKVGVVTVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ + ++G+ LLL++ + L+ R R
Sbjct: 122 GVSFIRLDFSGVAVFYSWGVGLFLVAGWGLLLALFVVLELVRGLSRGAIR 171
>gi|289183202|ref|YP_003457186.1| NADH dehydrogenase subunit 6 [Balanoglossus clavigerus]
gi|288995545|emb|CBH40147.1| NADH dehydrogenase subunit 6 [Balanoglossus clavigerus]
Length = 159
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 43/104 (41%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
SF+ + LV R+P +S ++ A V +G +L G+ F+ +I ++Y+G ++V F
Sbjct: 5 LSFLVVGGGILVFISRSPYFSALGVVGAVVGFSGFLVLSGSVFIGLILFLMYLGGMLVVF 64
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
+ + K + F + + + V
Sbjct: 65 AYSAALASDRYPDVGWSKAIPLVIIFGGLVPYFVVEGGGGGWEV 108
>gi|14141920|ref|NP_115375.1| NADH dehydrogenase subunit 6 [Anomalopteryx didiformis]
gi|14039598|gb|AAK53332.1|AF338714_1 NADH dehydrogenase subunit VI [Anomalopteryx didiformis]
Length = 173
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F I+ + V + +P Y V L+ V G L LGA F++++ +VY+G
Sbjct: 2 TYFVLFLGVCFILGALAVASNPSPYYGVLGLVVGSVMGCGWLLSLGASFISLVLFLVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G+ + ++ L+V + G +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVWGFGASLVLVVFGGLVVMGLVGVTVGGVGTVDCG 121
Query: 125 VFKGNNVENIGKVLYTQY-AYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G ++ + L ++G+ LLL++ + L+ R R
Sbjct: 122 GMVSVRTDFSGVAMFYSWGGGMLLVAGWGLLLTLFVVLELVRGVSRGAIR 171
>gi|194446029|ref|YP_002043382.1| hypothetical protein SNSL254_A4449 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194404692|gb|ACF64914.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
Length = 577
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|20330587|ref|NP_620326.1| NADH dehydrogenase subunit 6 [Arenaria interpres]
gi|20270011|gb|AAL74031.1| NADH dehydrogenase subunit 6 [Arenaria interpres]
Length = 173
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLLLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+I F+ + + A + G F+ ++ + ++V +
Sbjct: 62 GMISVFVSSVSLAADPFPEAWGDWRVVGYGVGFMLVVISGMVVGGIGECWKVGVVTVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ Y ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSYGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|56415956|ref|YP_153031.1| hypothetical protein SPA3956 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364883|ref|YP_002144520.1| hypothetical protein SSPA3682 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56130213|gb|AAV79719.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197096360|emb|CAR61965.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 577
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|194332941|ref|YP_002014801.1| putative monovalent cation/H+ antiporter subunit A
[Prosthecochloris aestuarii DSM 271]
gi|194310759|gb|ACF45154.1| NADH dehydrogenase (quinone) [Prosthecochloris aestuarii DSM 271]
Length = 765
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 5 SLFFY--LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
S+ FY +F+ ++S+ L+VT + + SV SL + +F++ GA VA+ T +
Sbjct: 594 SITFYEAALAFIIVVSTLLLVTSESRLKSVVSLGVLGFSIGIIFVIYGAPDVALTTFAIE 653
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
V++F L + + + + R + + +G +++ A++F
Sbjct: 654 TLNVVLFVLVLYRLPRFVKLSSTSNRVRDAMIALGVGGFMTMMVLVATSF 703
>gi|37596491|gb|AAQ95006.1| NADH dehydrogenase subunit 6 [Lagonosticta umbrinodorsalis]
Length = 159
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG F++++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVIGLVVAAVAGCGWLVSLGVSFMSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|16797925|gb|AAL29215.1| NADH dehydrogenase subunit 6 [Calidris tenuirostris]
Length = 173
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLLLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G FI +L A +IV +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGVSFILVLIAGVIVGGLVECWKVGVVTVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFLVRLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|15964745|ref|NP_385098.1| putative monovalent cation/H+ antiporter subunit A [Sinorhizobium
meliloti 1021]
gi|307304321|ref|ZP_07584073.1| NADH/Ubiquinone/plastoquinone (complex I) [Sinorhizobium meliloti
BL225C]
gi|307319426|ref|ZP_07598853.1| NADH/Ubiquinone/plastoquinone (complex I) [Sinorhizobium meliloti
AK83]
gi|15073923|emb|CAC45564.1| Probable Na(+)/H(+)-antiporter [Sinorhizobium meliloti 1021]
gi|306894798|gb|EFN25557.1| NADH/Ubiquinone/plastoquinone (complex I) [Sinorhizobium meliloti
AK83]
gi|306902789|gb|EFN33382.1| NADH/Ubiquinone/plastoquinone (complex I) [Sinorhizobium meliloti
BL225C]
Length = 791
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 1/107 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ +A++ F VV + + ++ SL A LFLL GA +A ++ +V+V
Sbjct: 607 FAIMAIAVLGLFAVVLAADRLTAIVSLGIQGFAVAMLFLLYGAPDLAFTQFMIETLSVVV 666
Query: 69 FFLFIIMM-LDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
L + + L +K F + GI ++ +
Sbjct: 667 LALVMTRLRLSPSDHRPLRQKLPDFTIALACGIGFGLFLLRVTGVPF 713
>gi|295065526|ref|YP_003587304.1| NADH dehydrogenase subunit 6 [Otis tarda]
gi|223951409|gb|ACN29662.1| ND6 [Otis tarda]
Length = 173
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ V G L LGA FV+++ +VY+G
Sbjct: 2 TYFMFFLGVCFVLGGLAVASNPSPYYGVIGLVLGSVVGCGWLLSLGASFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ +L +++ +
Sbjct: 62 GMLVVFVYSVSLAADPFPGAWGDWRVVGYGGGFVLVLVVGVVIGGPVGCWELGVITVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ Y ++G+ LLL++ + L+ R R
Sbjct: 122 GVFSMRLDFSGVAMFYSYGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|328471518|gb|EGF42405.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
220]
Length = 764
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 584 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 643
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 644 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 701
>gi|253960489|dbj|BAH84969.1| NADH dehydrogenase subunit 6 [Oryzias celebensis]
Length = 173
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 1/166 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
YLF ++ + + +P ++ L+ G+ G F+++I ++Y+G ++V
Sbjct: 6 YLFIMGLVLGLAAIASNPSPYFAALGLVLVAGMGCGMLAGHGGSFLSLILFLIYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + + L ++ I+ + S F
Sbjct: 66 VFAYSAALASEPYPEGWGSWPVSLLMMLYLFIVGLMGSYLCEGWFEGSWIVVDEFHEFSL 125
Query: 129 NNVENIGKVL-YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G L Y+ + L ++G++LLLS+ + L R R
Sbjct: 126 FRGDGGGVALIYSSGGFILILAGWVLLLSLFVILELTRGLNRGSLR 171
>gi|218157355|ref|YP_002364586.1| NADH dehydrogenase subunit 6 [Epinephelus lanceolatus]
gi|215789149|gb|ACJ69598.1| NADH dehydrogenase subunit 6 [Epinephelus lanceolatus]
gi|325126956|gb|ADY85989.1| NADH dehydrogenase subunit 6 [Epinephelus lanceolatus]
Length = 173
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 52/151 (34%), Gaps = 3/151 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F + I+ + V + +P + F L+ G+ + G+ F+A+I +
Sbjct: 1 MCFTIICFLIC---WIVGAIAVASNPSPFFGAFGLVVVAGVGCGILVEYGSSFLALILFL 57
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y+G ++V F + + + + + + V ++ +
Sbjct: 58 IYLGGMLVVFAYSAALAAEPYPESWLNSTVVVYMCCYAVAVMVGVSVFWHGWVGVFSGSA 117
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGF 151
F +N G + + I G
Sbjct: 118 DEWGPFGVFRADNGGVAVMYSEGGWMLIVGA 148
>gi|37596439|gb|AAQ94980.1| NADH dehydrogenase subunit 6 [Pytilia melba percivali]
Length = 159
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|37596501|gb|AAQ95011.1| NADH dehydrogenase subunit 6 [Spermophaga haematina haematina]
Length = 159
Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|297483385|ref|XP_002693554.1| PREDICTED: glycerophosphodiester phosphodiesterase domain
containing 2-like [Bos taurus]
gi|296479783|gb|DAA21898.1| glycerophosphodiester phosphodiesterase domain containing 2-like
[Bos taurus]
Length = 616
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 25/163 (15%)
Query: 34 SLIFAFVNAAGLFL----------------LLGAEFVAMITLVVYVGAVIVFFLFIIMML 77
LI +F + L LGA + +V + + + + M++
Sbjct: 69 WLIMSFFLSTILLFTWVETSNEYNGFDWVVFLGAR-IWFFWSLVLLSVIGILAAYTTMLV 127
Query: 78 DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKV 137
+ + + + I +L L+ +++ + E + +
Sbjct: 128 VLGFLLCWEKNELYLHWYHKIMVLIVILLCSFLMWILLTFWRERWLTI-------GLSLQ 180
Query: 138 LYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR-QDISKQ 179
++ Y + IS +LL + ++ L ++R Q+ S++
Sbjct: 181 VFAPYIHLSSISAMVLLSWPVAFYLIHLEGEARMRRYQNTSER 223
>gi|37596531|gb|AAQ95026.1| NADH dehydrogenase subunit 6 [Erythrura trichroa]
Length = 159
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|37596537|gb|AAQ95029.1| NADH dehydrogenase subunit 6 [Neochmia phaeton phaeton]
Length = 159
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|37596535|gb|AAQ95028.1| NADH dehydrogenase subunit 6 [Neochmia ruficauda]
Length = 159
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|1085235|pir||S42246 NADH2 dehydrogenase (ubiquinone) (EC 1.6.5.3) chain 6 - snow goose
mitochondrion
Length = 173
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + + V + +P Y V L+ A V G L LG FVA++ +VY+G
Sbjct: 2 TYFMFFLGICFAVGVLGVASNPSPYYGVVGLVLASVAGCGWLLGLGVSFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + F+ I+ L+ ++ +
Sbjct: 62 GMLVVFVYSVALAAEPFPGAWGDWRVIGCAVAFVAIVFGGLVFGGFMGAWKFGVSTVNNV 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G + Y+ A ++G+ LLL++ + L+ R R
Sbjct: 122 GVFVVRSDFSGVSMFYSHGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|238908466|ref|YP_002929450.1| NADH dehydrogenase subunit 6 [Platalea leucorodia]
gi|238626030|gb|ACR48312.1| NADH dehydrogenase subunit 6 [Platalea leucorodia]
Length = 173
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 1/165 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 7 FLGVCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + + G+ F+ +L +++ +
Sbjct: 67 FVYSVALAADLFPETWGDWRVMGYGAGFVLVLIVGVVMGGFVEGWKLGVDTVDSGGVFSV 126
Query: 130 NVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G + Y + ++G+ LLL++ A+ L+ R R
Sbjct: 127 RLDFSGVAMFYAEGVGMFLVAGWGLLLTLFVALELVRGLSRGAIR 171
>gi|156142548|gb|ABU52039.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
Length = 166
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 44/101 (43%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G + LG F++++ ++VY+G ++V
Sbjct: 1 FLGLCFVLGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFISLVLVMVYLGGMLVV 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
F++ + + A G ++A L++ +
Sbjct: 61 FVYSVSLAAEPYPEAWGNFGVVGYGFGMGLVVAVGLVMSGT 101
>gi|126792906|gb|ABO27309.1| NADH dehydrogenase subunit 6 [Aratinga leucophthalma]
Length = 170
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 57/146 (39%), Gaps = 3/146 (2%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++++ LV T +P Y V L+F + G + LGA F++++ +VY+G
Sbjct: 2 TYFLVFLGISFVLAALLVATNPSPHYGVVGLVFGSIVGCGWLVSLGASFMSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + +G + + + + +
Sbjct: 62 GMLVVFVYSVSLAADPFPQAWGG---WHAAGYVLGFVPVGMGFVIWGWGXGFKVDSVDSV 118
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISG 150
++ G L+ + ++
Sbjct: 119 GVLFARLDFSGAALFYSCGAGMFLAA 144
>gi|167551381|ref|ZP_02345136.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205323725|gb|EDZ11564.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
Length = 577
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|37596441|gb|AAQ94981.1| NADH dehydrogenase subunit 6 [Pytilia melba grotei]
Length = 159
Score = 35.4 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|321312705|ref|YP_004204992.1| monovalent cation/H+ antiporter subunit A [Bacillus subtilis BSn5]
gi|320018979|gb|ADV93965.1| monovalent cation/H+ antiporter subunit A [Bacillus subtilis BSn5]
Length = 800
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 71/170 (41%), Gaps = 5/170 (2%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ + + I ++ V R+ + ++ +L A F++ A +A+ LV+ +V +
Sbjct: 631 IILTLVMISATVATVFARSRLTAIIALGVVGYTLALFFVIFRAPDLALTQLVIETISVAL 690
Query: 69 FFLFIIMMLDIDIEVAEPRKKR-GFLGSFFIGILAAELIVCASN----FMVFSAEGELSR 123
F L + + ++ + F+ S +GI+ L + +S+ + S + S
Sbjct: 691 FLLCFYHLPKLRLKTKTRTFRMTNFIISLGVGIIVTLLGIASSSQRTKDSIASFFVKHSH 750
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G+NV N+ V + + EI+ + I +++ KR
Sbjct: 751 DLGGGDNVVNVILVDFRGFDTMFEITVLTIAALGIYSMIKTKVKEEGEKR 800
>gi|294054917|ref|YP_003548575.1| NADH/Ubiquinone/plastoquinone (complex I) [Coraliomargarita
akajimensis DSM 45221]
gi|293614250|gb|ADE54405.1| NADH/Ubiquinone/plastoquinone (complex I) [Coraliomargarita
akajimensis DSM 45221]
Length = 777
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 45/134 (33%), Gaps = 3/134 (2%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
M +IS+ +VV + S+ L A +F+ GA +A+ L+V + LF
Sbjct: 612 VMMLISTLVVVASNDFTTSLVGLGMIGFGVALIFVYYGAPDLAITQLLV---ETLTVVLF 668
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
+ ++ + + + + + + +S + + + E
Sbjct: 669 LFVVFRLPAMKQLSSSRVRVRDAILALSFGGLMTLLVLKAVSIQFHHPISEQLAQWSYPE 728
Query: 133 NIGKVLYTQYAYPL 146
GK +
Sbjct: 729 AKGKNVVNVILVDF 742
>gi|280978334|ref|YP_003345267.1| NADH dehydrogenase subunit 6 [Facciolella oxyrhyncha]
gi|271280758|dbj|BAI53482.1| NADH dehydrogenase subunit 6 [Facciolella oxyrhyncha]
Length = 172
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 61/167 (36%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +LF M ++ V + +P ++ L+ + G+ G FV+++ ++Y+G +
Sbjct: 4 FIFLFLIMLVLGVVGVASNPSPYFAALGLVVSAAGGCGILAGYGGSFVSLVLFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F + + + + ++ + + + + + +
Sbjct: 64 LVVFAYSVALAAEPYPEGWGDWSVLGRVGGCLLVILMGMYLGGGGLDYYCGVVDEGQDLS 123
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
N +Y L I G+ LLL++ + L R R
Sbjct: 124 AFRGDFNGVSFMYNLGGEMLFICGWALLLTLFVVLELTRGRSRGALR 170
>gi|37596455|gb|AAQ94988.1| NADH dehydrogenase subunit 6 [Euschistospiza dybowskii]
Length = 159
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|322717079|gb|EFZ08650.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
Length = 577
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPGRIRVIAAVIGVVL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|240266670|ref|YP_002971046.1| NADH dehydrogenase subunit 6 [Dendrocygna javanica]
gi|209887475|gb|ACI95091.1| NADH dehydrogenase subunit 6 [Dendrocygna javanica]
Length = 173
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 64/166 (38%), Gaps = 1/166 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ + V + +P Y V L+ A V G L LG F++++ +VY+G ++V
Sbjct: 6 FFLGVCFAVGVLGVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFISLVLFMVYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F++ + + A + + + ++ A ++ + +
Sbjct: 66 VFVYSVALAAEPFPKAWGDWRVVGHAAALVVVVFAGILYGGFAEFCKFEVNTVDSVGMSS 125
Query: 129 NNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 126 VRLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|200388578|ref|ZP_03215190.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|199605676|gb|EDZ04221.1| membrane protein YijP [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
Length = 577
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 51/158 (32%), Gaps = 22/158 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + +YS LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYLTGYSGTNGLRDSLLYSSLWLIPVFLFPARIRVIAAVIGVVL 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLVALAYTVAAILL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQY 142
+ S + G + I + ++
Sbjct: 139 WTRLRPVYIPSPWRYLVSFALLYGLILHPIAMNTFIKH 176
>gi|19553922|ref|NP_601924.1| putative monovalent cation/H+ antiporter subunit A [Corynebacterium
glutamicum ATCC 13032]
gi|62391565|ref|YP_226967.1| monovalent cation/H+ antiporter subunit A [Corynebacterium
glutamicum ATCC 13032]
gi|21325501|dbj|BAC00123.1| NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit
Na+/H+ antiporter, MnhA subunit [Corynebacterium
glutamicum ATCC 13032]
gi|41326907|emb|CAF20751.1| NADH ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit
Na+/H+ antiporter, A subunit [Corynebacterium glutamicum
ATCC 13032]
Length = 1019
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 12/150 (8%)
Query: 31 SVFSLI-FAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKK 89
S L+ A +F L GA +A+ ++V IV +F++++ + EVA +
Sbjct: 635 SALILVGVTGYGIAVIFALHGAPDLALTQVLV---ETIVMVVFMLVLRKMPTEVAWKAEP 691
Query: 90 RGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEIS 149
+ ++ +V + F + + E V+ + IG T +++
Sbjct: 692 KQSRVRAWLAGATGLSVVIVTIFAMNARTTE-PISVYMQDLAYEIGHGANTVNVLLVDLR 750
Query: 150 GF-------ILLLSMIGAIVLMLRHRRDIK 172
GF +L+++ G L+ R+R K
Sbjct: 751 GFDTFGEISVLVIAATGIASLVYRNRSFRK 780
>gi|280978221|ref|YP_003345162.1| NADH dehydrogenase subunit 6 [Anarchias sp. Ansp]
gi|271280202|dbj|BAI53183.1| NADH dehydrogenase subunit 6 [Anarchias sp. Ansp]
Length = 172
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 56/169 (33%), Gaps = 10/169 (5%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
LF + ++ V + P ++ L+ A G+ G FV+++ ++Y+G ++V
Sbjct: 7 LFMSLFVLGLVGVASNPAPYFAALGLVLAAGGGCGVLASYGGSFVSLVLFLIYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + + G + L + + V + G
Sbjct: 67 FAYSAALAAEPYPES-----WGDWSVLGYVVGYGLLCALGAVWYVNTEGGYCFTSGESEG 121
Query: 130 NVENIGKVLYTQYAYPL-----EISGFILLLSMIGAIVLMLRHRRDIKR 173
G Y Y I G+ LLL++ + L R R
Sbjct: 122 LSVLRGDFSGVSYIYYFGGEMLIICGWALLLTLFVVLELARGRERGALR 170
>gi|224500602|ref|ZP_03668951.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
Finland 1988]
Length = 802
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|37596433|gb|AAQ94977.1| NADH dehydrogenase subunit 6 [Lagonosticta rufopicta]
Length = 159
Score = 35.4 bits (80), Expect = 4.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|327492763|ref|YP_004347650.1| NADH dehydrogenase subunit 6 [Marilyna darwinii]
gi|327392628|dbj|BAK10053.1| NADH dehydrogenase subunit 6 [Marilyna darwinii]
Length = 172
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 42/107 (39%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ S ++ L+ +P + +L+ + + G+ +L G F++++ L++Y+G ++V
Sbjct: 7 MLSLGIMVGMILLALNPSPFFGSLNLVLLVLYSCGILILYGGSFLSLVLLMIYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS 116
F++ + ++ ++ +
Sbjct: 67 FVYSSALSADKDPEMPKSISFILGLGWYFLLVFGFWHKTTGGDGYWW 113
>gi|320007962|gb|ADW02812.1| NADH/Ubiquinone/plastoquinone (complex I) [Streptomyces
flavogriseus ATCC 33331]
Length = 967
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 8/165 (4%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
+F+ ++ +TV + +V AA LF++ GA +A+ V ++IV
Sbjct: 598 VAFLTCAAALSCLTVSRRMKAVVLAGLTGYGAALLFVVQGAPDLALTQFCVETVSMIV-- 655
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNN 130
F++++ + + E + + AA + A + E +
Sbjct: 656 -FVLVLRRLPVRFEESIGTWRRALRIPVALGAAATVGVAVWAAGAARVAEPAGAAMVEEV 714
Query: 131 VEN-----IGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRD 170
+ + +L A+ +L + IG L+ HRR
Sbjct: 715 AHHGLKDVVATILVDLRAWDTMGESAVLAAAAIGVTSLIYLHRRG 759
>gi|108793530|ref|YP_637073.1| NADH dehydrogenase subunit 6 [Phalanger interpositus]
gi|94481227|dbj|BAE94030.1| NADH dehydrogenase subunit 6 [Phalanger vestitus]
Length = 167
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 66/166 (39%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + +LFSF+ I+ + +PIY SL+ + + + + LG F+ ++ +VY
Sbjct: 1 MGMMVVFLFSFLLILGFVAFASKPSPIYGGLSLVVSGGFGSAIVVSLGNTFLGLVVFLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+G ++V F + M + + F F ++ + V +A
Sbjct: 61 LGGMLVVFGYTAAMATEEYPESWVGNMVAFSMLLFTLLVELVWYFMSGEIEVSTAVELFD 120
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ ++ G L + + +L I ++ ++RHR
Sbjct: 121 AVGNYCVEQDSGGVALLYGCGGWILVLLGWVLFITIYVVLEVVRHR 166
>gi|255025960|ref|ZP_05297946.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL J2-003]
Length = 802
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|217963517|ref|YP_002349195.1| Na(+)/H(+) antiporter subunit A (Multiple resistance and
pHhomeostasis protein A) (Mrp complex subunit A)
[Listeria monocytogenes HCC23]
gi|217332787|gb|ACK38581.1| Na(+)/H(+) antiporter subunit A (Multiple resistance and
pHhomeostasis protein A) (Mrp complex subunit A)
[Listeria monocytogenes HCC23]
gi|307571908|emb|CAR85087.1| Na+/H+ antiporter component A [Listeria monocytogenes L99]
Length = 802
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|254901160|ref|ZP_05261084.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
J0161]
gi|254914053|ref|ZP_05264065.1| hypothetical protein LMPG_03008 [Listeria monocytogenes J2818]
gi|254938368|ref|ZP_05270065.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
F6900]
gi|258610981|gb|EEW23589.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
F6900]
gi|293592072|gb|EFG00407.1| hypothetical protein LMPG_03008 [Listeria monocytogenes J2818]
Length = 802
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|37596417|gb|AAQ94969.1| NADH dehydrogenase subunit 6 [Lagonosticta rara]
Length = 159
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|16804416|ref|NP_465901.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
EGD-e]
gi|224503733|ref|ZP_03672040.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL R2-561]
gi|16411866|emb|CAD00456.1| lmo2378 [Listeria monocytogenes EGD-e]
Length = 802
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|284802820|ref|YP_003414685.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
08-5578]
gi|284995962|ref|YP_003417730.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
08-5923]
gi|284058382|gb|ADB69323.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
08-5578]
gi|284061429|gb|ADB72368.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
08-5923]
Length = 802
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|283787364|ref|YP_003367229.1| hypothetical protein ROD_37901 [Citrobacter rodentium ICC168]
gi|282950818|emb|CBG90494.1| putative membrane protein [Citrobacter rodentium ICC168]
Length = 577
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 46/161 (28%), Gaps = 21/161 (13%)
Query: 6 LFFYLFSFMAIISSFLVV--------TVRNPIYSVFSLIFAFVN------AAGL--FLLL 49
L+F+ FS ++ + + + + +YS LI F+ A + +L
Sbjct: 22 LYFWFFS--TLLQAIIFISGYSGTNGLRDSLLYSSLWLIPVFLFPNRIRIIAAVTGIILW 79
Query: 50 GAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
A A+ V+Y LF++ + + + A I
Sbjct: 80 AASLAALSYYVIYGQEFSQSVLFVMFESNANEASEYLAQYFSMKLVLIALAYTAVAIFLW 139
Query: 110 SNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAY---PLE 147
+ L+ I L T P E
Sbjct: 140 TRLRPVYIPSPWRYLISFALLYGLILHPLATGTLIKHKPFE 180
>gi|270267432|ref|YP_003331131.1| NADH dehydrogenase subunit 6 [Proedromys sp. BBH-2008]
gi|213516901|gb|ACJ49882.1| NADH dehydrogenase subunit 6 [Proedromys liangshanensis]
Length = 174
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/116 (16%), Positives = 39/116 (33%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
Y S + + +PIY LI + + L G F+ ++ ++Y+G +
Sbjct: 4 LIYFLSLVIALGCLGTSLKPSPIYGGLCLIVSGCSGCLAVLGFGGSFLGLMVFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+V F + M D A + ++ +S + E +
Sbjct: 64 LVVFGYTTAMSAEDYPEAWVSSWLTVGVLLMSIFMELGMLFVSSYYEGAEMMLEFN 119
>gi|254831198|ref|ZP_05235853.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
10403S]
Length = 802
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|254829557|ref|ZP_05234244.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL N3-165]
gi|290894197|ref|ZP_06557167.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL J2-071]
gi|258601972|gb|EEW15297.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL N3-165]
gi|290556260|gb|EFD89804.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL J2-071]
Length = 802
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|46908551|ref|YP_014940.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
serotype 4b str. F2365]
gi|226224930|ref|YP_002759037.1| Na(+)/H(+) antiporter subunit A (Multiple resistance and pH
homeostasis protein A) [Listeria monocytogenes
Clip81459]
gi|254933442|ref|ZP_05266801.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
HPB2262]
gi|46881823|gb|AAT05117.1| putative Na+/H+ antiporter component A [Listeria monocytogenes
serotype 4b str. F2365]
gi|225877392|emb|CAS06106.1| Putative Na(+)/H(+) antiporter subunit A (Multiple resistance and
pH homeostasis protein A) [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293585004|gb|EFF97036.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
HPB2262]
gi|332312811|gb|EGJ25906.1| Na(+)/H(+) antiporter subunit A [Listeria monocytogenes str. Scott
A]
Length = 802
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|154687269|ref|YP_001422430.1| monovalent cation/H+ antiporter subunit A [Bacillus
amyloliquefaciens FZB42]
gi|154353120|gb|ABS75199.1| MrpA [Bacillus amyloliquefaciens FZB42]
Length = 800
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ S + + ++ V ++ + ++ SL A F++ A +A+ LV+ +V +
Sbjct: 631 IVLSLVMVSATIATVFAKSRLTAIISLGVVGYTLALFFVIFRAPDLALTQLVIETISVAL 690
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F L + ++ +K R F + FI L +IV S + + S F
Sbjct: 691 FLLCFYHL----PKMRRKKKTRTFRMTNFIISLGVGVIVTMLGIASSSEKTKDSISSFFT 746
Query: 129 NNVENIG 135
+G
Sbjct: 747 AYSHKLG 753
>gi|19481548|gb|AAL88846.1|AF407113_1 NADH dehydrogenase subunit 6 [Ortygospiza atricollis]
Length = 159
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|315283468|ref|ZP_07871650.1| Na(+)/H(+) antiporter subunit A [Listeria marthii FSL S4-120]
gi|313612885|gb|EFR86845.1| Na(+)/H(+) antiporter subunit A [Listeria marthii FSL S4-120]
Length = 802
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|197935733|ref|YP_002213637.1| NADH dehydrogenase subunit 6 [Anser anser]
gi|197131218|gb|ACH47164.1| NADH dehydrogenase subunit 6 [Anser anser]
Length = 173
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + + V + +P Y V L+ A V G L LG FVA++ +VY+G
Sbjct: 2 TYFMFFLGICFAVGVLGVASNPSPYYGVVGLVLASVAGCGWLLGLGVSFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + F+ I+ L+ ++ +
Sbjct: 62 GMLVVFVYSVALAAEPFPGAWGDWRVIGCAVAFVAIVFGGLVFGGFMGAWKFGVSTVNNV 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G + Y+ A ++G+ LLL++ + L+ R R
Sbjct: 122 GVFVVRSDFSGVSMFYSHGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|37596421|gb|AAQ94971.1| NADH dehydrogenase subunit 6 [Lagonosticta rubricata congica]
Length = 159
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVIGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|37596563|gb|AAQ95042.1| NADH dehydrogenase subunit 6 [Lonchura malabarica]
Length = 159
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 63/156 (40%), Gaps = 2/156 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + G ++ L+V ++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWADWGVVGYGFGMGLVVMVGLVVGGVFGVLVGEGMLD 118
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSM 157
+ + VLY+ I G+ LLL++
Sbjct: 119 GAGLLSVRLDSSGVAVLYSHGVGLFLIGGWGLLLTL 154
>gi|254826361|ref|ZP_05231362.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL J1-194]
gi|254854471|ref|ZP_05243819.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL R2-503]
gi|255521806|ref|ZP_05389043.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL J1-175]
gi|300766240|ref|ZP_07076203.1| hypothetical protein LMHG_11323 [Listeria monocytogenes FSL N1-017]
gi|258607872|gb|EEW20480.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL R2-503]
gi|293595601|gb|EFG03362.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
FSL J1-194]
gi|300513056|gb|EFK40140.1| hypothetical protein LMHG_11323 [Listeria monocytogenes FSL N1-017]
gi|328465248|gb|EGF36505.1| monovalent cation/H+ antiporter subunit A [Listeria monocytogenes
1816]
Length = 802
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|37596515|gb|AAQ95018.1| NADH dehydrogenase subunit 6 [Cryptospiza shelleyi]
Length = 159
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|1171841|sp|P43198|NU6M_CEPGR RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394668|emb|CAA52122.1| NADH dehydrogenase subunit 6 [Cepphus grylle]
gi|21104318|emb|CAC80341.1| NADH dehydrogenase subunit 6 [Cepphus grylle]
Length = 173
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 63/165 (38%), Gaps = 1/165 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 7 FLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + A G FI +L ++V +
Sbjct: 67 FVYSVSLAADPFPEAWGDWGVVGYGMSFIVVLVVGVVVGGFVEGWDFGVVTVDSAGVFFA 126
Query: 130 NVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 127 RLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|289435644|ref|YP_003465516.1| Na+/H+ antiporter component A, putative [Listeria seeligeri serovar
1/2b str. SLCC3954]
gi|289171888|emb|CBH28434.1| Na+/H+ antiporter component A, putative [Listeria seeligeri serovar
1/2b str. SLCC3954]
Length = 802
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|239636523|ref|ZP_04677525.1| Na(+)/H(+) antiporter subunit A [Staphylococcus warneri L37603]
gi|239597878|gb|EEQ80373.1| Na(+)/H(+) antiporter subunit A [Staphylococcus warneri L37603]
Length = 807
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 36/77 (46%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
+ +I+SFL+V ++ ++S+ L + + LF+ A +A+ VV + +F L
Sbjct: 630 VLLVIASFLIVFAKSRLFSIIMLSAVGYSVSVLFIFFKAPDLALTQFVVESISTALFLLC 689
Query: 73 IIMMLDIDIEVAEPRKK 89
+ +++ K
Sbjct: 690 FYFLPNLNRYNETRSFK 706
>gi|190349481|ref|YP_001974552.1| NADH dehydrogenase subunit 6 [Platalea minor]
gi|134268955|gb|ABO68978.1| NADH dehydrogenase subunit 6 [Platalea minor]
gi|283131464|dbj|BAI63462.1| NADH dehydrogenase subunit 6 [Platalea minor]
gi|283131465|dbj|BAI63463.1| NADH dehydrogenase subunit 6 [Platalea minor]
gi|283131468|dbj|BAI63465.1| NADH dehydrogenase subunit 6 [Platalea minor]
gi|283131469|dbj|BAI63466.1| NADH dehydrogenase subunit 6 [Platalea minor]
Length = 173
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 67/165 (40%), Gaps = 1/165 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 7 FLGVCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + A + G+ F+ +L +++ +
Sbjct: 67 FVYSVALAADLFPEAWGDWRVMGYGAGFVLVLIVGVVMGGFVEGWKLGVDTVDSGGVFSV 126
Query: 130 NVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G + Y + ++G+ LLL++ A+ L+ R R
Sbjct: 127 RLDFSGVAMFYAEGVGMFLVAGWGLLLTLFVALELVRGLSRGAIR 171
>gi|83309070|ref|YP_423948.1| NADH dehydrogenase subunit 6 [Cathartes aura]
gi|38373484|gb|AAR19060.1| NADH dehydrogenase subunit 6 [Cathartes aura]
Length = 173
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 71/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVFFLGVCFVLGGLAVASNPSPYYGVVGLVLASVMGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A ++ G+ + +L + V + +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDRRVVGYGAGLVLVLVVGVGVVGVVGGWEWGVVTVDSV 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G + Y++ A ++G+ LLL++ + L+ R R
Sbjct: 122 GLFSIRLDFSGAAMFYSRGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|87311224|ref|ZP_01093347.1| protein export membrane protein, SecD/SecF family, putative
[Blastopirellula marina DSM 3645]
gi|87286132|gb|EAQ78043.1| protein export membrane protein, SecD/SecF family, putative
[Blastopirellula marina DSM 3645]
Length = 963
Score = 35.4 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 65/176 (36%), Gaps = 12/176 (6%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAE 85
R+ +S+ +L A LF + G + + + +IV L + + +D + V
Sbjct: 757 RSLRHSLLALTPVGFGGAMLFGIQG-----FMDIPLNPANMIVLPLILGIGIDDGVHVLH 811
Query: 86 PRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYP 145
+ + AA +++ + M+ G S ++ ++++G+VL
Sbjct: 812 DFRCQAGKRYRISASTAAAVLITSLTTMI----GFGSLMLADHQGLQSLGRVLTIGVTCC 867
Query: 146 LEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSI--VMVKVKSGKGI 199
L + I+L + + I L+ ++Q + + KGI
Sbjct: 868 L-FTSLIVLPAFLSTITWNLKTEESSRKQKPEATRKRIRPGLLSDFDKDAPPAKGI 922
>gi|320354811|ref|YP_004196150.1| cytochrome bd quinol oxidase subunit 1 apoprotein [Desulfobulbus
propionicus DSM 2032]
gi|320123313|gb|ADW18859.1| cytochrome bd quinol oxidase subunit 1 apoprotein [Desulfobulbus
propionicus DSM 2032]
Length = 851
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 23/187 (12%), Positives = 58/187 (31%), Gaps = 36/187 (19%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTV-------RNPI-------YSVFSLIFAFVNAA---- 43
++ ++F + A+ +V NP ++ F L+ V +
Sbjct: 18 ILIAVFHVYIAHFAVGGGLFLVLAERKAEREHNPAILEYVRRHARFFLVLTMVAGSITGV 77
Query: 44 GLFLLLGAEFVAMITLVVY-------------VGAVIVFFLFIIMMLDIDIEVAEPRKKR 90
G++ ++ A +++++ + ++ FL+ +
Sbjct: 78 GIWFIIALLNPAATSILIHTFVFAWASEWVFFLLEIVSLFLYAYTFGRLHPSRHRVLGWI 137
Query: 91 GFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISG 150
F ++ L +I + G F + + L+ + L I+G
Sbjct: 138 YFGSAWMSLFLINGIIGFMLTPGDWPQTGSFWSGFFNPSFWPS----LFFRTFLALIIAG 193
Query: 151 FI-LLLS 156
LL +
Sbjct: 194 LFGLLTA 200
>gi|313632133|gb|EFR99219.1| Na(+)/H(+) antiporter subunit A [Listeria seeligeri FSL N1-067]
Length = 802
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 739
>gi|331090822|ref|ZP_08339668.1| hypothetical protein HMPREF9477_00311 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330399681|gb|EGG79343.1| hypothetical protein HMPREF9477_00311 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 385
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 5/175 (2%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYV 63
++ F + + + +++ + S LIF FV L+L L ++ +
Sbjct: 133 TTILFAMIGVFLL--ALVLIGRGKGVTSALGLIFTFVCI--LYLYLPMMYLG-FSPFFSA 187
Query: 64 GAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSR 123
V + + M G +G I + A L + + +
Sbjct: 188 VVVTILTTLVTMYFIGGFSKKTLCAIVGTVGGVVIAGIFANLFGKLGHITGHNVSDIETL 247
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
L N+ IG +L++ + + +S+ I + H ++ RQ + K
Sbjct: 248 LYIGQNSKLQIGGLLFSGILIASLGAVMDVAMSISTTIEELHFHNPNLTRQQLFK 302
>gi|325001784|ref|ZP_08122896.1| NADH dehydrogenase (quinone) [Pseudonocardia sp. P1]
Length = 792
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 6/168 (3%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
M +I++ + R +V + GLF++ G +A+ +V +V F
Sbjct: 606 VGLMVVIAAVALTRARRRFTAVLLVGAVGYGIGGLFVIDGGPDLALAQFLV-ETLTLVAF 664
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNN 130
+F++ L + + ++ + + + A + + F N
Sbjct: 665 VFVLRRLPAHFDEPDTERRVRAPKAALAAVGGVFVAGTAVVLSGARLQPPSTTDAFVANA 724
Query: 131 VENIGKVLYTQYAYPLEIS-----GFILLLSMIGAIVLMLRHRRDIKR 173
E L + ILL+ G L+L R D K+
Sbjct: 725 PEAGATNLISAILVDFRALDTIGEITILLICAAGTASLVLATRYDKKK 772
>gi|311069660|ref|YP_003974583.1| monovalent cation/H+ antiporter subunit A [Bacillus atrophaeus
1942]
gi|310870177|gb|ADP33652.1| monovalent cation/H+ antiporter subunit A [Bacillus atrophaeus
1942]
Length = 806
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ S + I ++ V ++ + ++ SL A F++ A +A+ LV+ +V +
Sbjct: 631 IILSVVMISATAATVFAKSRLTAIISLGIVGYTLALFFVIFRAPDLALTQLVIETISVAL 690
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F L + + +K R F + FI L +IV S + S F
Sbjct: 691 FLLCFYHLPKLR----WKKKTRTFRLNNFIISLGVGIIVTLLGIASSSQRTKDSIASFFT 746
Query: 129 NNVENIG 135
+ ++G
Sbjct: 747 KHSHDLG 753
>gi|37596453|gb|AAQ94987.1| NADH dehydrogenase subunit 6 [Hypargos margaritatus]
Length = 159
Score = 35.4 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|19481558|gb|AAL88851.1|AF407118_1 NADH dehydrogenase subunit 6 [Quelea quelea]
Length = 159
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGVCFVLGGLAVASNPSPYYGVVGLVVAAIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
Y+G ++V F++ + + A G ++ LIV
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPEAWTDWGVVGYGFGLGLVVMIGLIV 104
>gi|330466405|ref|YP_004404148.1| putative monovalent cation/H+ antiporter subunit A [Verrucosispora
maris AB-18-032]
gi|328809376|gb|AEB43548.1| putative monovalent cation/H+ antiporter subunit A [Verrucosispora
maris AB-18-032]
Length = 946
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 34/92 (36%), Gaps = 3/92 (3%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
+ +++ L V R + ++ + A F+L GA +A+ +V + V F
Sbjct: 593 VVISVAALLAVGARRRMTAMLLVGMTGYGTAMFFVLYGAPDLALTQFLVETVTIAV---F 649
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAE 104
++++ + + IG +
Sbjct: 650 VLVLRRLPKRFSVRPLWSSRWLRRGIGAIVGL 681
>gi|324111422|gb|EGC05403.1| sulfatase [Escherichia fergusonii B253]
Length = 577
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYITGYSGTTGIRDSLLFSSLWLIPVFLFPNRTKIIAAVIGVML 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + A I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLIALAYTAVAILL 138
Query: 109 ASNFMVFSAEGELSRLV 125
+ L+
Sbjct: 139 WTRLRPVYIPSPWRYLI 155
>gi|280978501|ref|YP_003345422.1| NADH dehydrogenase subunit 6 [Robinsia catherinae]
gi|271280132|dbj|BAI53222.1| NADH dehydrogenase subunit 6 [Robinsia catherinae]
gi|293329593|dbj|BAJ04322.1| NADH dehydrogenase subunit 6 [Robinsia catherinae]
Length = 172
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 57/171 (33%), Gaps = 1/171 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F + ++ V + P Y L+ A G+ G F++++ ++Y
Sbjct: 1 MSYFVFSFLGMV-VVGFLCVASNPAPYYGALGLVLAAAGGCGILADFGGSFISLVLFLIY 59
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+G ++V F + + + L ++ + A + C +
Sbjct: 60 LGGMLVVFAYSAALAAEPYPESWGNWSVFGLVLLYLLLGAFGVGWCYGELFEGCGIVDEY 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + +Y L I G++LLL++ + L R
Sbjct: 120 NSLSVLRGDFSGVSYMYNLGGGMLIICGWVLLLTLFAILELTRGRSSGSLR 170
>gi|37596549|gb|AAQ95035.1| NADH dehydrogenase subunit 6 [Aidemosyne modesta]
Length = 159
Score = 35.4 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG F++++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFISLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + G ++ IV + ++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWADWGVVGYGLGMGLVVVVGFIVGGMSGVLVDEATVN 118
Query: 122 S 122
S
Sbjct: 119 S 119
>gi|37596427|gb|AAQ94974.1| NADH dehydrogenase subunit 6 [Lagonosticta virata]
Length = 159
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVIGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|19481544|gb|AAL88844.1|AF407111_1 NADH dehydrogenase subunit 6 [Estrilda astrild]
Length = 159
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
Y+G ++V F++ + + D F +G++ +V F V
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPESWVDWGVVGYGFGMGLVVMVGLVIGGVFGVL 111
>gi|280978488|ref|YP_003345410.1| NADH dehydrogenase subunit 6 [Ariosoma shiroanago]
gi|271280633|dbj|BAI53418.1| NADH dehydrogenase subunit 6 [Ariosoma shiroanago]
Length = 171
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 1/138 (0%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
+ ++ + V + +P Y+ L+ A G+ + G F++++ +VY+G ++V F +
Sbjct: 10 VILVLGAVGVASNPSPYYAALGLVMAAAGGCGILIGCGGFFISLVLFLVYLGGMLVVFGY 69
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
++ D + + I + + V GE SR + +
Sbjct: 70 TAALVSDDYPEEFMEWSVAYRLVGCLLITVLLDSLGGRSVYVCVQVGEHSRHSAVSSELG 129
Query: 133 NIGKVLYTQYAYPLEISG 150
+ LY L I G
Sbjct: 130 GM-SCLYGDGGLLLIICG 146
>gi|221145448|ref|YP_002519662.1| NADH dehydrogenase subunit 6 [Scarus schlegeli]
gi|219560077|gb|ACL27241.1| NADH dehydrogenase subunit 6 [Scarus schlegeli]
Length = 173
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 43/108 (39%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S LF+ ++ V + +P ++ +L+ GL G F+A++ ++Y+G
Sbjct: 2 SFLVVLFTIGLVLGLIGVASNPSPYFAALALVVVAWAGCGLLTSYGGSFLALVLFLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
++V F + + A R G + + +V N+
Sbjct: 62 GMLVVFAYSSALAAEIYPEAWLRAGPGVAMYLYTSAVLVATVVYLYNW 109
>gi|156530268|gb|ABU75236.1| NADH dehydrogenase subunit 6 [Bombina bombina]
Length = 169
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 3/164 (1%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
F ++ V + +P Y+ L+ A + + GA F++++ ++Y+G ++V
Sbjct: 7 FFLVGLVLGLVAVASNPSPYYAALGLVMAAGAGCCVIVNFGASFLSLVLFLIYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + A ++ ++ A G + +V
Sbjct: 67 FAYSAALTAEPYPEAWGSWSVAGYVLVYLLLVVAGYYAVGGLTFSEFLLGGGAVVVRGDL 126
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ +Y+ L + G+ILLL++ + L H R R
Sbjct: 127 VGVSL---MYSSGGLMLIVGGWILLLTLFVVLELTRGHYRGGLR 167
>gi|51101190|ref|YP_063358.1| NADH dehydrogenase subunit 6 [Acanthogobius hasta]
gi|45685264|gb|AAS75391.1| NADH dehydrogenase subunit 6 [Acanthogobius hasta]
Length = 173
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 14/104 (13%), Positives = 39/104 (37%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y+F I+ V + +P ++ L+ G+ + GA F++++ ++Y+G ++V
Sbjct: 6 YIFLLGLILGMVAVASNPSPFFAALGLVVVSGMGCGVLVGHGAPFLSLVLFLIYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
F + + ++ + + +
Sbjct: 66 VFAYSAALAADPCPEGLGSREVAINAGSCVVASLVGGGLFCGLW 109
>gi|37596423|gb|AAQ94972.1| NADH dehydrogenase subunit 6 [Lagonosticta rubricata rubricata]
Length = 159
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVIGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|27819341|ref|NP_777314.1| NADH dehydrogenase subunit 6 [Anser albifrons]
gi|27764489|gb|AAO23052.1|AF363031_13 NADH dehydrogenase subunit 6 [Anser albifrons]
Length = 173
Score = 35.4 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ + + V + +P Y V L+ A V G L LG FVA++ +VY+G
Sbjct: 2 TYLMFFLGICFAVGVLGVASNPSPYYGVVGLVLASVAGCGWLLGLGVSFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + F+ I+ L+ ++ +
Sbjct: 62 GMLVVFVYSVALAAEPFPGAWGDWRVIGCAVAFVAIVFGGLVFGGFMGAWKFGVSTVNNV 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G + Y+ A ++G+ LLL++ + L+ R R
Sbjct: 122 GVFVVRSDFSGVSMFYSHGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|188039038|ref|YP_001905920.1| NADH dehydrogenase subunit 6 [Antedon mediterranea]
gi|183014005|emb|CAL50597.1| NADH dehydrogenase subunit 6 [Antedon mediterranea]
Length = 163
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 65/165 (39%), Gaps = 6/165 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+L + + S LV +P +S L+ +++ L +G F+A+I L+VY+G +++
Sbjct: 4 FLINITLLFGSSLVFYSISPYFSALGLVIVSISSCFLLSKIGISFLALILLLVYMGGMLI 63
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F++ + + + I + ++ +
Sbjct: 64 VFIYSSAITNDRFPTISNINE------ITILSIIFLFWNVILINNNNWQNISINNNLSNS 117
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++E + + A +SG+ILL+S++ + + + R
Sbjct: 118 VSIEGSSYIFHYSMAPFFILSGYILLISLLAVLNISRGNDDSSLR 162
>gi|37596511|gb|AAQ95016.1| NADH dehydrogenase subunit 6 [Estrilda perreini perreini]
Length = 159
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V LI A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLIVAAVAGCGWLVSLGLSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|21104306|emb|CAC80350.1| NADH dehydrogenase subunit 6 [Pinguinus impennis]
Length = 173
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 66/170 (38%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLFLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G FI +L +IV + +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGVGFITVLMMGVIVSGFVGCWDFGVVTVDSV 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ +G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFGGVAMFYSCGVGMFLAAGWGLLLTLFVVLELVRGLTRGAIR 171
>gi|16357120|ref|NP_443487.1| NADH dehydrogenase subunit 6 [Ijimaia dofleini]
gi|16266815|dbj|BAB70012.1| NADH dehydrogenase subunit 6 [Ijimaia dofleini]
Length = 173
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 51/147 (34%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ +LF I+ V + P ++ L+ A G+ + G F++++ ++Y+G
Sbjct: 2 TYLMFLFLLGLIVGLVGVASNPAPYFAALGLVLAAGCGCGILVGFGGSFLSLVLFLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F + + + + ++ L + + S
Sbjct: 62 GMLVVFAYSAALAAEPFPETWGDRSVLGYVAIYLMGLLFFSVWFWGAWYGGSWFVVEEMK 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGF 151
F + G L Y P+ + G
Sbjct: 122 DFVVVRGDVGGVSLMYSYGGPMLVLGA 148
>gi|322422462|ref|YP_004221887.1| NADH dehydrogenase subunit 6 [Heterotis niloticus]
gi|317176381|dbj|BAJ54205.1| NADH dehydrogenase subunit 6 [Heterotis niloticus]
Length = 173
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 59/165 (35%), Gaps = 1/165 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L M II V + P Y+ F L+ A V + + G F++++ ++Y+G ++V
Sbjct: 7 LLMVMLIIGLVAVASNPAPYYAAFGLVLAAVMGCCVLMWHGGPFLSLVLFMIYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + ++ L + + F
Sbjct: 67 FAYSAALAAEPYPEVWWDLSVFSYVLVYLLGLGVVGGWLSDGWYKNFWVVVDEFKEFSVV 126
Query: 130 NVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G +LY+ + L + G+ LLL + + L R R
Sbjct: 127 RLDMGGVALLYSSGGWMLIVCGWALLLMLFVVLELTRGLGRGTLR 171
>gi|37596419|gb|AAQ94970.1| NADH dehydrogenase subunit 6 [Lagonosticta larvata nigricollis]
Length = 159
Score = 35.4 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVIGLVVAAIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|225690854|gb|ACO06111.1| NADH dehydrogenase subunit 6 [Cleisthenes herzensteini]
Length = 173
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 43/108 (39%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ Y F ++ V + +P Y+ + L+ + + GA F++MI ++Y+G
Sbjct: 2 AFVMYFILFFFVLGLVAVASNPSPYYAAYGLVVVAGMGCSVLIGHGAPFLSMILFLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
++V F F + M V G ++ AA V +
Sbjct: 62 GMLVVFAFAVAMASEPHPVGWNSWAVLGYGLVYMAATAAVAGVLRGGW 109
>gi|218551054|ref|YP_002384845.1| hypothetical protein EFER_3808 [Escherichia fergusonii ATCC 35469]
gi|218358595|emb|CAQ91243.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia fergusonii ATCC 35469]
gi|325499305|gb|EGC97164.1| hypothetical protein ECD227_3402 [Escherichia fergusonii ECD227]
Length = 577
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 46/137 (33%), Gaps = 18/137 (13%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + +T + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYITGYSGTTGIRDSLLFSSLWLIPVFLFPNRTKIIAAVIGVML 78
Query: 50 GAEFVAMI-TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A + V+Y LF++ + + + A I+
Sbjct: 79 WAASLAALSYYVIYGQEFSQSVLFVMFETNANEASEYLSQYFSLKIVLIALAYTAVAILL 138
Query: 109 ASNFMVFSAEGELSRLV 125
+ L+
Sbjct: 139 WTRLRPVYIPSPWRYLI 155
>gi|37596503|gb|AAQ95012.1| NADH dehydrogenase subunit 6 [Pyrenestes ostrinus]
Length = 159
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|219524269|ref|YP_002456409.1| NADH dehydrogenase subunit 6 [Mitsukurina owstoni]
gi|169640938|gb|ACA61228.1| NADH dehydrogenase subunit 6 [Mitsukurina owstoni]
Length = 173
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 48/144 (33%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F +L I+ V + +P Y+ L+ A GL + G F+++I ++Y+G +
Sbjct: 4 FMFLMMICLILGLIGVASNPSPYYAALGLVMAAGVGCGLLVGHGGSFMSLILFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F + + + F+ L + S G
Sbjct: 64 LVVFAYTAALAAEPYPESWGNWSVLLYVGFYFMGLIFISKYFMVKWFELSWGGVEEMSNL 123
Query: 127 KGNNVENIGKVLYTQYAYPLEISG 150
+ + +G L L +
Sbjct: 124 EMVRGDFVGVALLYADGGWLLVLS 147
>gi|169627739|ref|YP_001701388.1| putative monovalent cation/H+ antiporter subunit A [Mycobacterium
abscessus ATCC 19977]
gi|169239706|emb|CAM60734.1| Putative cation antiporter NADH dehydrogenase subunit
[Mycobacterium abscessus]
Length = 949
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 59/167 (35%), Gaps = 11/167 (6%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + + ++ +RN + +V + +F L GA +A+ +V +
Sbjct: 599 VVGLLILAAAIGATVMRNRLAAVLLVGITGYGTGTIFALHGAPDLALTQFLV---ETLTL 655
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
+F++++ + E + R L + I + + + + +
Sbjct: 656 VIFVLVLRALPAESDIQQANRFRLPRAVLAIAVGCTVTALGVYAMAARRDRPIADLLPQA 715
Query: 130 NVENIGKVLYTQYAYPLEISG-------FILLLSMIGAIVLMLRHRR 169
+ G T ++I +LL++ G LM RHRR
Sbjct: 716 AYQR-GHGANTVNVLLVDIRAWDTLGEISVLLVAATGVASLMFRHRR 761
>gi|164449776|ref|YP_001648818.1| NADH dehydrogenase subunit 6 [Acrocephalus scirpaceus]
gi|164414692|emb|CAP10120.1| NADH dehydrogenase subunit 6 [Acrocephalus scirpaceus]
Length = 172
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 32/173 (18%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LGTCFVLGGLAVASNPSPYYGVVGLVVASIAGCGWLVGLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ + F +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEAWTDWGVVGYGFGMGLVIVVGVAMGGVFGSLVDTDTV 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + G L+ + I G+ LLL++ + L+ R R
Sbjct: 118 NNGGLLLVRSDFSGVALFYSWGAGLFLIGGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|6137813|ref|NP_009290.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|62287136|sp|Q9TA18|NU6M_LOXAF RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|5852115|emb|CAA12149.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|83415416|gb|ABC17915.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747801|gb|ABG89412.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747805|gb|ABG89415.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747825|gb|ABG89430.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747829|gb|ABG89433.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747841|gb|ABG89442.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747853|gb|ABG89451.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747857|gb|ABG89454.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747865|gb|ABG89460.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747869|gb|ABG89463.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747893|gb|ABG89481.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747905|gb|ABG89490.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747921|gb|ABG89502.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747925|gb|ABG89505.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747929|gb|ABG89508.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747933|gb|ABG89511.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747937|gb|ABG89514.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747941|gb|ABG89517.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747949|gb|ABG89523.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747953|gb|ABG89526.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747977|gb|ABG89544.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747981|gb|ABG89547.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747997|gb|ABG89559.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748017|gb|ABG89574.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748033|gb|ABG89586.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748041|gb|ABG89592.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748057|gb|ABG89604.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748061|gb|ABG89607.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748069|gb|ABG89613.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748089|gb|ABG89628.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748113|gb|ABG89646.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748117|gb|ABG89649.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748121|gb|ABG89652.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748137|gb|ABG89664.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748141|gb|ABG89667.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748149|gb|ABG89673.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748161|gb|ABG89682.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748169|gb|ABG89688.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748177|gb|ABG89694.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748189|gb|ABG89703.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748197|gb|ABG89709.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748205|gb|ABG89715.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748209|gb|ABG89718.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
Length = 175
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 68/169 (40%), Gaps = 10/169 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + ++ + +P+Y SL+ + G+ + G F+ ++ +VY+G ++V
Sbjct: 6 FIMSVLYVVGFIGFSSKPSPVYGGMSLVVSGGLGCGIIMGSGGSFLGLVVFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSAEGELSRL 124
F + I M + ++ +I+ + + F G +
Sbjct: 66 VFGYTIAMATEEYPETWGSNVVVLGAFLVGLLMEVFMIMWLFSGEHELVGFYFGGLEDLM 125
Query: 125 VFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V E + G LY+ + L ++G++L +S+ AI + +
Sbjct: 126 VLGEGGFEYVREDYSGGASLYSYGFWFLAMAGWMLFVSIFIAIEVTRKR 174
>gi|71410116|ref|XP_807369.1| dispersed gene family protein 1 (DGF-1) [Trypanosoma cruzi strain CL
Brener]
gi|70871354|gb|EAN85518.1| dispersed gene family protein 1 (DGF-1), putative [Trypanosoma cruzi]
Length = 3426
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIF---AFVNAAGLFLLLGAEFVAMITLVVYVGA 65
Y +++ VV N + S F + +FV A L ++ A +A A
Sbjct: 3288 YFCMAAVLLAGAGVVAFTNMMRSAFLTVMHAASFVLLAVLCVVSAANHLAPSDGGARAYA 3347
Query: 66 VIVFFLFIIMM 76
IV L +M+
Sbjct: 3348 AIVLLLSTVML 3358
>gi|327492735|ref|YP_004347624.1| NADH dehydrogenase subunit 6 [Omegophora armilla]
gi|327392614|dbj|BAK10040.1| NADH dehydrogenase subunit 6 [Omegophora armilla]
Length = 173
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 48/142 (33%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
LF + V + +P + SL+ G+ + G F++++ ++Y+G ++V
Sbjct: 7 LFLVGLVFGLVAVASNPSPYFGALSLVVVAAFGCGILIWHGGSFLSLVLFLIYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + + + GI+ + +S E + +
Sbjct: 67 FAYSVALAAEPYPETLGSWPVLASMLMYFGIVVLFFTLVFGGLGEYSWEVVDGADWYSMS 126
Query: 130 NVENIGKVLYTQYAYPLEISGF 151
+ G Y + + G
Sbjct: 127 RGDMAGVAFMYSYGGGMLMIGA 148
>gi|224504008|gb|ACN53591.1| NADH dehydrogenase subunit 6 [Balearica pavonina]
Length = 173
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 5/167 (2%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 7 FMGLCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGISFVSLVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + E +G IL + + F+ G ++
Sbjct: 67 FVYSVSL--AADPYPEAWGDWRVMGYAVGFILVLGMGLVVGGFVEHWNFGVVAVDSGGMF 124
Query: 130 NVENIGKVLYTQYAY---PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+V + Y++ ++G+ LLL++ + L+ R R
Sbjct: 125 SVRLDFSGVAMFYSWGGGLFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|55583438|ref|YP_138277.1| NADH dehydrogenase subunit 6 [Hyla chinensis]
gi|46981619|gb|AAT07871.1| NADH dehydrogenase subunit 6 [Hyla chinensis]
Length = 165
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 18/126 (14%), Positives = 47/126 (37%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+LF + V + +P Y+ L+ + + + GA F++++ +VY+G ++V
Sbjct: 3 FLFEVGLVAGFLAVASNPSPYYAALGLVVSAGVGCLILMYGGASFLSLVLFLVYLGGMMV 62
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + ++ A ++ +L+ ++ + + V
Sbjct: 63 VFAYSAALVAEPYPEAWGSVGVVIYLVGYLVLLSLWWLIGGGSKAMCMDNQWFDAYVGDW 122
Query: 129 NNVENI 134
V +
Sbjct: 123 FGVSML 128
>gi|331746935|ref|YP_004425083.1| NADH dehydrogenase subunit 6 [Anas formosa]
gi|330369642|gb|AEC12187.1| NADH dehydrogenase subunit 6 [Anas formosa]
Length = 173
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 70/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G L LG FVA++ +VY+G
Sbjct: 2 TYFVFFLGICFVVGVLGVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + + + ++ L++ + +
Sbjct: 62 GMLVVFVYSVALAAEPFPEAWGDWRVVGYAAALVAVVLGGLVLGGFIGSWGLGVVTVDSV 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G +LY++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFTVRLDFSGVAMLYSRGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|242373119|ref|ZP_04818693.1| CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A
[Staphylococcus epidermidis M23864:W1]
gi|242349273|gb|EES40874.1| CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A
[Staphylococcus epidermidis M23864:W1]
Length = 816
Score = 35.0 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
+I+SFL++ ++ ++S+ L + LF+ A +A+ VV + +F L
Sbjct: 645 IFLLIASFLIIFAKSRLFSIIMLSAVGYAISVLFIFFKAPDLALTQFVVESISTALFLLC 704
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
+ +++ +P K IG+ +I+ +
Sbjct: 705 FYHLPNLNRYNEKPAFKV-TNALISIGVGLVVIILGLIGY 743
>gi|302201575|gb|ADL09134.1| NADH dehydrogenase subunit 6 [Aceros corrugatus]
Length = 173
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 61/157 (38%), Gaps = 1/157 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
F ++ V + +P Y V L+ V G L LG F+A++ +VY+G ++V
Sbjct: 7 FFGLAFVLGGLAVASNPSPYYGVVGLVLGSVAGCGWLLSLGVSFIALVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + A + G+ + +L ++V
Sbjct: 67 FVYSVALAADPFPEAWGSRHVLSYGAGLVLVLTLGVVVGGLMECWKLGAITTDAGGMFFA 126
Query: 130 NVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLML 165
+ G ++ + ++G+ LLL++ + L+
Sbjct: 127 RADFSGVAMFYSWGVGMFLVAGWGLLLTLFVVLELVR 163
>gi|322422853|ref|YP_004222722.1| NADH dehydrogenase subunit 6 [Leiothrix argentauris]
gi|316891659|gb|ADU57270.1| NADH dehydrogenase subunit 6 [Leiothrix argentauris]
Length = 172
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 69/165 (41%), Gaps = 2/165 (1%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L ++ V + +P Y V L+ A + G + LGA FV+++ L+VY+G ++V
Sbjct: 7 LMGLFFVLGGLAVSSNPSPYYGVVGLVVASIAGCGWLVSLGASFVSLVLLMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + D F + ++ + + + V G ++ +
Sbjct: 67 FVYSVSLA-ADPYPEAWGDWGVVGYGFGMSLVVGVGLALSGVYEVLVDVGTVNNVGLALA 125
Query: 130 NVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ + I G+ LLL++ + L+ R R
Sbjct: 126 RLDFGGVAVFYSWGAGLFLIGGWGLLLALFVVLELVRGLSRGAIR 170
>gi|15804551|ref|NP_290592.1| hypothetical protein Z5513 [Escherichia coli O157:H7 EDL933]
gi|12518877|gb|AAG59157.1|AE005627_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 577
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I ++ + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNMFIK-NKPFE 180
>gi|15834138|ref|NP_312911.1| hypothetical protein ECs4884 [Escherichia coli O157:H7 str. Sakai]
gi|168748738|ref|ZP_02773760.1| putative sulfatase [Escherichia coli O157:H7 str. EC4113]
gi|168755649|ref|ZP_02780656.1| putative sulfatase [Escherichia coli O157:H7 str. EC4401]
gi|168761653|ref|ZP_02786660.1| putative sulfatase [Escherichia coli O157:H7 str. EC4501]
gi|168768267|ref|ZP_02793274.1| putative sulfatase [Escherichia coli O157:H7 str. EC4486]
gi|168775200|ref|ZP_02800207.1| putative sulfatase [Escherichia coli O157:H7 str. EC4196]
gi|168780882|ref|ZP_02805889.1| putative sulfatase [Escherichia coli O157:H7 str. EC4076]
gi|168786821|ref|ZP_02811828.1| putative sulfatase [Escherichia coli O157:H7 str. EC869]
gi|168799454|ref|ZP_02824461.1| putative sulfatase [Escherichia coli O157:H7 str. EC508]
gi|195937605|ref|ZP_03082987.1| hypothetical protein EscherichcoliO157_14337 [Escherichia coli
O157:H7 str. EC4024]
gi|208807036|ref|ZP_03249373.1| sulfatase family protein [Escherichia coli O157:H7 str. EC4206]
gi|208812946|ref|ZP_03254275.1| sulfatase family protein [Escherichia coli O157:H7 str. EC4045]
gi|208819735|ref|ZP_03260055.1| sulfatase family protein [Escherichia coli O157:H7 str. EC4042]
gi|209397001|ref|YP_002273477.1| sulfatase family protein [Escherichia coli O157:H7 str. EC4115]
gi|217324625|ref|ZP_03440709.1| sulfatase family protein [Escherichia coli O157:H7 str. TW14588]
gi|254795960|ref|YP_003080797.1| hypothetical protein ECSP_5024 [Escherichia coli O157:H7 str.
TW14359]
gi|261226421|ref|ZP_05940702.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256821|ref|ZP_05949354.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK966]
gi|13364360|dbj|BAB38307.1| membrane protein [Escherichia coli O157:H7 str. Sakai]
gi|187769218|gb|EDU33062.1| putative sulfatase [Escherichia coli O157:H7 str. EC4196]
gi|188016757|gb|EDU54879.1| putative sulfatase [Escherichia coli O157:H7 str. EC4113]
gi|189001506|gb|EDU70492.1| putative sulfatase [Escherichia coli O157:H7 str. EC4076]
gi|189357199|gb|EDU75618.1| putative sulfatase [Escherichia coli O157:H7 str. EC4401]
gi|189362553|gb|EDU80972.1| putative sulfatase [Escherichia coli O157:H7 str. EC4486]
gi|189367902|gb|EDU86318.1| putative sulfatase [Escherichia coli O157:H7 str. EC4501]
gi|189373292|gb|EDU91708.1| putative sulfatase [Escherichia coli O157:H7 str. EC869]
gi|189378045|gb|EDU96461.1| putative sulfatase [Escherichia coli O157:H7 str. EC508]
gi|208726837|gb|EDZ76438.1| sulfatase family protein [Escherichia coli O157:H7 str. EC4206]
gi|208734223|gb|EDZ82910.1| sulfatase family protein [Escherichia coli O157:H7 str. EC4045]
gi|208739858|gb|EDZ87540.1| sulfatase family protein [Escherichia coli O157:H7 str. EC4042]
gi|209158401|gb|ACI35834.1| sulfatase family protein [Escherichia coli O157:H7 str. EC4115]
gi|209752038|gb|ACI74326.1| phosphoenolpyruvate carboxylase [Escherichia coli]
gi|209752040|gb|ACI74327.1| phosphoenolpyruvate carboxylase [Escherichia coli]
gi|209752042|gb|ACI74328.1| phosphoenolpyruvate carboxylase [Escherichia coli]
gi|209752046|gb|ACI74330.1| phosphoenolpyruvate carboxylase [Escherichia coli]
gi|217320846|gb|EEC29270.1| sulfatase family protein [Escherichia coli O157:H7 str. TW14588]
gi|254595360|gb|ACT74721.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|320190943|gb|EFW65593.1| UPF0141 membrane protein YijP [Escherichia coli O157:H7 str.
EC1212]
gi|320644521|gb|EFX13582.1| hypothetical protein ECO9389_17176 [Escherichia coli O157:H- str.
493-89]
gi|320649845|gb|EFX18360.1| hypothetical protein ECO2687_15720 [Escherichia coli O157:H- str. H
2687]
gi|320665937|gb|EFX32963.1| hypothetical protein ECOSU61_23475 [Escherichia coli O157:H7 str.
LSU-61]
gi|326338027|gb|EGD61857.1| UPF0141 membrane protein YijP [Escherichia coli O157:H7 str. 1044]
gi|326342678|gb|EGD66451.1| UPF0141 membrane protein YijP [Escherichia coli O157:H7 str. 1125]
Length = 577
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I ++ + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNMFIK-NKPFE 180
>gi|730211|sp|P41322|NU6M_LARCA RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394678|emb|CAA52137.1| NADH dehydrogenase subunit 6 [Larus canus]
Length = 173
Score = 35.0 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 66/170 (38%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLFLGLCFVLGGLAVASNPSPYYGVVGLVVASVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G+ F+ +L +V +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGAGFVLVLVVGGVVGGLVEFWHPGVITVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|269986885|gb|EEZ93162.1| hypothetical protein BJBARM4_0254 [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 744
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 57/163 (34%), Gaps = 18/163 (11%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++F+ + + +P+ + F A + L A + M+ LV ++ +
Sbjct: 79 FIFALITFF-----ILYTDPV------LLHFFLNAFIVLAFIALVLGMLVLVKSPRSIKL 127
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
L I++ L + + + + I +L V ++ A + +
Sbjct: 128 IGLLIVLFLLMVLFENDTSLTNSINSTLHISLLNILPFVFGMIAVLIFAVLLIKGIRNSR 187
Query: 129 NNVENIGKVLYTQYAYPLEISGF-------ILLLSMIGAIVLM 164
N + + L I GF I+L ++ AI+L
Sbjct: 188 NTAVRVALLFIVFLMITLLIPGFAGFLFNPIVLTAIFVAIILA 230
>gi|291285375|ref|YP_003502193.1| Membrane protein [Escherichia coli O55:H7 str. CB9615]
gi|209752044|gb|ACI74329.1| phosphoenolpyruvate carboxylase [Escherichia coli]
gi|290765248|gb|ADD59209.1| Membrane protein [Escherichia coli O55:H7 str. CB9615]
gi|320655195|gb|EFX23144.1| hypothetical protein ECO7815_00257 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660819|gb|EFX28269.1| hypothetical protein ECO5905_18915 [Escherichia coli O55:H7 str.
USDA 5905]
Length = 577
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I ++ + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNMFIK-NKPFE 180
>gi|256833647|ref|YP_003162374.1| NADH dehydrogenase (quinone) [Jonesia denitrificans DSM 20603]
gi|256687178|gb|ACV10071.1| NADH dehydrogenase (quinone) [Jonesia denitrificans DSM 20603]
Length = 1003
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 14 MAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFI 73
+ + + LV R + ++ + F + A +FLL GA +A+ ++V ++V L +
Sbjct: 625 VIVPAVILVARARRRVKAIVLMGFGGYSIAAIFLLHGAPDLALTQVLVETVTIVVMVLVL 684
Query: 74 IMMLDI-DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
+ + + +G+ A L V N +
Sbjct: 685 RRLPPYFSDRPLRASRFGRLALAIVVGVFAMALAVIIPNARI 726
>gi|218157328|ref|YP_002364480.1| NADH dehydrogenase subunit 6 [Todiramphus sanctus vagans]
gi|166093123|gb|ABY82554.1| NADH dehydrogenase subunit 6 [Todiramphus sanctus vagans]
Length = 173
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 68/168 (40%), Gaps = 1/168 (0%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + F I+ V + +P Y V L+ A V G L LG FVA++ +VY+G +
Sbjct: 4 FMFFLGFCFILGGLAVASNPSPYYGVVGLVLASVVGCGWLLNLGVSFVALVLFMVYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F++ + + A + G + +L ++V + +
Sbjct: 64 LVVFVYSVSLAADPFPEAWADWRVLGYGVGLVMVLVWGVVVSGLVECLKFEVVTVDSGGV 123
Query: 127 KGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ + ++G+ LLL++ + L+ R R
Sbjct: 124 GFGRLDFSGVAMFYSWGVGMFLVAGWGLLLTLFVVLELVRGLARGAIR 171
>gi|37596459|gb|AAQ94990.1| NADH dehydrogenase subunit 6 [Uraeginthus granatina]
Length = 159
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 56/140 (40%), Gaps = 2/140 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + G ++ L+V ++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWVDWGVVGYGFGMGLVVMIGLVVGGVFGVLVDGGVVD 118
Query: 122 SRLVFKGNNVENIGKVLYTQ 141
S + N VLY+
Sbjct: 119 SGGLLPIRLDFNGAAVLYSD 138
>gi|320639129|gb|EFX08765.1| hypothetical protein ECO5101_23954 [Escherichia coli O157:H7 str.
G5101]
Length = 577
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 54/163 (33%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I ++ + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNMFIK-NKPFE 180
>gi|317176451|dbj|BAJ54270.1| NADH dehydrogenase subunit 6 [Xenomystus nigri]
Length = 173
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 41/106 (38%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F ++S ++ V + P Y+ F L+ A GL + G F++++ ++Y+G +
Sbjct: 4 LFIVYSVGLMLGLVGVASNPAPYYAAFGLVLAAAAGCGLLVGSGGSFLSLVLFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
+V F + + + ++ L + +
Sbjct: 64 MVVFAYSAALAAELFPETWGERPVFSYFVIYVVGLVFVGALAYGGW 109
>gi|220908918|ref|YP_002484229.1| hypothetical protein Cyan7425_3547 [Cyanothece sp. PCC 7425]
gi|219865529|gb|ACL45868.1| putative multicomponent Na+:H+ antiporter subunit B [Cyanothece
sp. PCC 7425]
Length = 198
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 31/66 (46%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y+ + + +++ +V+ NP +++ AA + +LGA VA+ +V ++
Sbjct: 6 YMITALLPLAAVMVMFQTNPYHALVMRGILGAVAALTYSVLGAPDVALTEALVGTLLAVL 65
Query: 69 FFLFII 74
+ +
Sbjct: 66 LYAVAV 71
>gi|195147724|ref|XP_002014825.1| GL18741 [Drosophila persimilis]
gi|194106778|gb|EDW28821.1| GL18741 [Drosophila persimilis]
Length = 307
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 46/149 (30%), Gaps = 12/149 (8%)
Query: 27 NPIYSVFSLIFAFVNA------AGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDID 80
+P+ F+ AGL++ L +A L+ V +V +
Sbjct: 73 SPVALSMFSALVFIRVGYIVGNAGLYITLLQFLIAYGILLFTVASVCAISTNGAIEGGGV 132
Query: 81 IEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYT 140
+ F GS IG L V S + + G + + G L
Sbjct: 133 YFMISRTLGVEFGGS--IGTLFFFANVVGSAMAITGCTEAIMDNFGPGGHFVSDGATLPD 190
Query: 141 QYAYPLEISGFI----LLLSMIGAIVLML 165
+ S I LL+ ++GA +
Sbjct: 191 GDWWRFLTSSIINTCQLLVCLVGAALFAK 219
>gi|19481542|gb|AAL88843.1|AF407110_1 NADH dehydrogenase subunit 6 [Hypargos niveoguttatus]
Length = 159
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 3/119 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVIGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
Y+G ++V F++ + + D F +G++ +V F V G
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPESWVDWGVVGYGFGMGLVVVIGLVIGGVFGVLVDVGT 116
>gi|13508747|emb|CAC35123.1| NADH dehydrogenase subunit 6 [Muscicapa striata]
gi|14268494|emb|CAC39396.1| NADH dehydrogenase subunit 6 [Muscicapa striata]
Length = 172
Score = 35.0 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 3/149 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMHFVLF--LGVCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + + + ++ IV EG +
Sbjct: 59 YLGGMLVVFVYSVALA-AEPYPEAWADWGVVGHGLGMCLVIMIGIVAGGGLGCLVDEGTV 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISG 150
++ G ++ + L + G
Sbjct: 118 DSGGLSSLRMDFSGVAMFYSWGAGLLMIG 146
>gi|37596489|gb|AAQ95005.1| NADH dehydrogenase subunit 6 [Euplectes hordeaceus]
Length = 159
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 45/109 (41%), Gaps = 2/109 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y L+ A + G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGVCFVLGGLAVASNPSPYYGAAGLVVAAIAGGGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
Y+G ++V F++ + + G ++ L+V
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPETWTDWGVVGYGFGLGLVIMVGLVVVGL 107
>gi|224483638|gb|ACN51360.1| NADH dehydrogenase subunit 6 [Saxicola rubicola]
Length = 172
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
++Q + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MIQFVLF--LGVCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
Y+G ++V F++ + + A G ++ ++V
Sbjct: 59 YLGGMLVVFVYSVSLAAEPYPEAWGDWGVVGHGLGMCLVVMVGIMV 104
>gi|148239303|ref|YP_001224690.1| subunit of the multisubunit Na+/H+ antiporter [Synechococcus sp.
WH 7803]
gi|147847842|emb|CAK23393.1| Predicted subunit of the Multisubunit Na+/H+ antiporter
[Synechococcus sp. WH 7803]
Length = 177
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGL-FLLLGAEFVAMITLVVYVGAVIV 68
+ + + ++S +V NP Y L F + A L ++LLGA VA+ +V
Sbjct: 22 ITALLPLVSVLMVC-QDNP-YQALMLRGVFGSVATLLYVLLGAPDVALTEAMVGTLLSTT 79
Query: 69 FFLFII 74
++ +
Sbjct: 80 LYVIAL 85
>gi|16357260|ref|NP_443357.1| NADH dehydrogenase subunit 6 [Coelorinchus kishinouyei]
gi|16267015|dbj|BAB70168.1| NADH dehydrogenase subunit 6 [Coelorinchus kishinouyei]
Length = 173
Score = 35.0 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 49/133 (36%)
Query: 16 IISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIM 75
++ + + + +P+Y+V L+ A + + G F++++ +VY+G ++V F +
Sbjct: 13 VLGAAALASNPSPVYAVLGLVLMAGMACMILINSGGPFLSLLFFLVYLGGMLVVFAHCVA 72
Query: 76 MLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIG 135
+ A + + +IV N+ +E + E G
Sbjct: 73 LAAERYPKAWGDVIFLGALVGVVVGYSVAVIVGWVNWFGVGSESGYDFDDYSFICPEGEG 132
Query: 136 KVLYTQYAYPLEI 148
L L +
Sbjct: 133 LGLLYDKGGWLLL 145
>gi|37596457|gb|AAQ94989.1| NADH dehydrogenase subunit 6 [Uraeginthus ianthinogaster]
Length = 159
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVMF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAA 103
Y+G ++V F++ + + + G ++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWVDWGVVGYGFGMGLVVMI 100
>gi|48478479|ref|YP_024185.1| NADH dehydrogenase subunit J [Picrophilus torridus DSM 9790]
gi|48431127|gb|AAT43992.1| NADH-quinone oxidoreductase chain J [Picrophilus torridus DSM 9790]
Length = 73
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 124 LVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
+ + N+ IG L++ Y P E+ IL+ ++IG + + RR
Sbjct: 28 FIIRSQNISRIGTELFSTYIIPFELLSLILVAAIIGVMYIAWEERR 73
>gi|241203718|ref|YP_002974814.1| membrane-bound PQQ-dependent dehydrogenase,
glucose/quinate/shikimate family [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240857608|gb|ACS55275.1| membrane-bound PQQ-dependent dehydrogenase,
glucose/quinate/shikimate family [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 779
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 43/141 (30%), Gaps = 10/141 (7%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSL--IFAFVNAAGLFLLLGAEFVAMITL 59
++ S+FF + +VT+ SVF L F+ AGL L+ A +
Sbjct: 4 IVTSIFFIIVGLTLSGGGLWLVTLGG---SVFYLFAGLMFLITAGLLLMRKAVALW---- 56
Query: 60 VVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
VY V+ + I + D PR L ++ + + +
Sbjct: 57 -VYAVLVVAALAWAIWEVGFDWWQLGPRGGMIILLGLWLLTPWIRRPLGLRSPTGITYAA 115
Query: 120 ELSRLVFKGNNVENIGKVLYT 140
L + T
Sbjct: 116 NPWPLAAPVILAILVALYSMT 136
>gi|66276029|ref|YP_238280.1| NADH dehydrogenase subunit 6 [Branta canadensis]
gi|63004247|gb|AAY25515.1| NADH dehydrogenase subunit 6 [Branta canadensis]
Length = 173
Score = 35.0 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + + V + +P Y V L+ A V G L LG F+A++ +VY+G
Sbjct: 2 AYFMFFLGICFAVGVLGVASNPSPYYGVVGLVLASVAGCGWLLGLGVSFLALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ L+ ++ +
Sbjct: 62 GMLVVFVYSVALAAEPFPEAWGDWRVIGCGVAFVVVVFGGLVFGGFMGSWKFEVATVNNV 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G + Y+ A ++G+ LLL++ + L+ R R
Sbjct: 122 GMFVTRSDFCGVSMFYSHGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|126792908|gb|ABO27310.1| NADH dehydrogenase subunit 6 [Nannopsittaca dachilleae]
Length = 171
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 68/169 (40%), Gaps = 1/169 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++++ LV + +P Y V L+F V G F+ LGA F++++ +VY+G
Sbjct: 2 AYFVLFLGVGFVLAALLVASNPSPYYGVVGLVFGSVVGCGWFVSLGASFMSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + + + L+ +V + +
Sbjct: 62 GMLVVFVYSVSLAADPFPQVWXGWRVVGYILGLVLALSVGCVVWGWGGEFGVNTADSVGV 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
F + + Y+ ++G+ LLL++ + L+ R R
Sbjct: 122 FFVRLDFGGVAL-FYSLGGGLFLMAGWGLLLTLFVVLELVRGLSRGAIR 169
>gi|2660572|emb|CAA71362.1| NADH deyhdrogenase subunit 6 [Ficedula albicollis]
gi|2660578|emb|CAA71363.1| NADH dehydrogenase subunit 6 [Ficedula semitorquata]
gi|13508732|emb|CAC35109.1| NADH dehydrogenase subunit 6 [Ficedula albicollis]
gi|13508735|emb|CAC35117.1| NADH dehydrogenase subunit 6 [Ficedula semitorquata]
gi|13508738|emb|CAC35119.1| NADH dehydrogenase subunit 6 [Ficedula semitorquata]
gi|13508741|emb|CAC35121.1| NADH dehydrogenase subunit 6 [Ficedula speculigera]
gi|14268380|emb|CAC39331.1| NADH dehydrogenase subunit 6 [Ficedula semitorquata]
gi|14268382|emb|CAC39349.1| NADH dehydrogenase subunit 6 [Ficedula speculigera]
gi|14268384|emb|CAC39350.1| NADH dehydrogenase subunit 6 [Ficedula speculigera]
gi|14268386|emb|CAC39351.1| NADH dehydrogenase subunit 6 [Ficedula speculigera]
gi|14268388|emb|CAC39352.1| NADH dehydrogenase subunit 6 [Ficedula speculigera]
gi|14268390|emb|CAC39353.1| NADH dehydrogenase subunit 6 [Ficedula speculigera]
Length = 172
Score = 35.0 bits (79), Expect = 5.6, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+MQ + F ++ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMQFVLF--LGVCFVLGGLAVASNPSPYYGVVGLVLASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|296099652|gb|ADG95255.1| NADH dehydrogenase subunit 6 [Polypterus sp. Koliba]
Length = 167
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 49/110 (44%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ +FS + +IS V + +P ++ F L+ G+ + G F++MI ++Y+G
Sbjct: 2 VLMVIFSMIFLISLIAVASNPSPYFAAFGLMVGAGAGCGMLMQCGMTFLSMILFLIYLGG 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
++V F + + A + ++ ++ +V +F VF
Sbjct: 62 MLVVFAYSAALAAEPYPRAWGSWEVFSYVLGYVLLIVGAWVVFVGDFEVF 111
>gi|227489326|ref|ZP_03919642.1| monovalent cation/H+ antiporter subunit A [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227090699|gb|EEI26011.1| monovalent cation/H+ antiporter subunit A [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 988
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 69/167 (41%), Gaps = 5/167 (2%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + + I+++ + N + ++ + + +F L GA +A+ ++V ++++F
Sbjct: 614 IIALIMIVAAIAATRLNNRLSALIMVGMTGYGLSMIFALYGAPDLALTQVLVETISMVIF 673
Query: 70 F-----LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
L + ++ D ++ PR + +L+ S + EL++
Sbjct: 674 MLVLRKLPVATVVPPDKKLIRPRAWLSVGLGVVVVVLSTFASNARSATPISVYIPELAKE 733
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ G N N+ V + EIS +++ + + +IV R +
Sbjct: 734 IGHGANAVNVLLVDLRGWDTLGEISVLVIVATGVASIVFRNRDFTRV 780
>gi|119962588|ref|YP_949368.1| monovalent cation/H+ antiporter subunit A [Arthrobacter aurescens
TC1]
gi|119949447|gb|ABM08358.1| putative NADH ubiquinone oxidoreductase/Multisubunit Na+/H+
antiporter, MnhA/B subunit [Arthrobacter aurescens TC1]
Length = 1005
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ ++ + V +V + A +F L GA +A+ ++V IV
Sbjct: 613 VAGAGIVVGALAAVRANKRFLAVLMVSVTGYGIALMFALQGAPDLALTQMLV---ETIVL 669
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
F++ M + E+ + R + IG ++ + +
Sbjct: 670 VAFVLAMRSLPAELRDRTGGRLRVIRVIIGAAFGITMIFVAIY 712
>gi|154505763|ref|ZP_02042501.1| hypothetical protein RUMGNA_03303 [Ruminococcus gnavus ATCC 29149]
gi|153793781|gb|EDN76201.1| hypothetical protein RUMGNA_03303 [Ruminococcus gnavus ATCC 29149]
Length = 799
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 44/138 (31%), Gaps = 2/138 (1%)
Query: 35 LIFAF-VNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFL 93
LI +F + ++L +G + + + +++ + + + GF
Sbjct: 54 LILSFCFLVSLMYLSMGHMMWNWPLPGILAENHVAMGILQLLLTGCVMIINQKFFVSGFQ 113
Query: 94 GSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL 153
G + +V F + +++ V+ + + E + IL
Sbjct: 114 SLLH-GAPNMDTLVALGAGASFGYSTYALFAMTDAQMRQDMAGVMTYMHEFYFESAAMIL 172
Query: 154 LLSMIGAIVLMLRHRRDI 171
L +G ++ +
Sbjct: 173 TLITVGKMLEARSKGKTT 190
>gi|108793460|ref|YP_636930.1| NADH dehydrogenase subunit 6 [Diretmoides veriginae]
gi|25005815|dbj|BAC23448.1| NADH dehydrogenase subunit 6 [Diretmoides veriginae]
Length = 171
Score = 35.0 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 34/103 (33%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ F + +VV + Y+ LIF V +G G F+ + ++Y+
Sbjct: 3 ILETFFVSGILFGMLMVVCTSSTYYASLGLIFVCVLGSGAVCCSGGVFLCLTLSLIYLAG 62
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
++V F+F + E ++ +
Sbjct: 63 MLVVFIFCTALSAEAYPEDEGSSWNVYVVVTVGVFWVVTCLFW 105
>gi|293368328|ref|ZP_06614956.1| CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A
[Staphylococcus epidermidis M23864:W2(grey)]
gi|291317575|gb|EFE57993.1| CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A
[Staphylococcus epidermidis M23864:W2(grey)]
Length = 751
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 17/107 (15%), Positives = 43/107 (40%), Gaps = 1/107 (0%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
+I+S ++ ++ ++S+ L + LF+ A +A+ VV + +F L
Sbjct: 580 LFLLIASTFIIFAKSRLFSIIMLSAVGYAISVLFIFFKAPDLALTQFVVESISTALFLLC 639
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +++ +P K IG+ + +I+ + +
Sbjct: 640 FYHLPNLNRYNEKPTFK-LTNAVISIGVGLSVIILGLIGYGNRHFDS 685
>gi|37596435|gb|AAQ94978.1| NADH dehydrogenase subunit 6 [Lagonosticta nitidula]
Length = 159
Score = 35.0 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|312183563|gb|ADQ42351.1| NADH:ubiquinone oxidoreductase J [Methanosaeta harundinacea]
Length = 88
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 126 FKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + +IG ++T Y E+ G +LL +MIGAI + +
Sbjct: 44 APESGIGDIGVEIFTLYIVAFEVLGLVLLAAMIGAIYVARKE 85
>gi|116873743|ref|YP_850524.1| monovalent cation/H+ antiporter subunit A [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116742621|emb|CAK21745.1| Na+/H+ antiporter component A, putative [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 802
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 622 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLI 681
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 682 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGIIITLVSLSAYNTSFYDS 739
>gi|312076055|ref|XP_003140690.1| patched family protein [Loa loa]
gi|307764145|gb|EFO23379.1| patched family protein [Loa loa]
Length = 851
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 77/194 (39%), Gaps = 25/194 (12%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTV--RNPIYS--------VFSLIFAFVNAAGLFLLLGAE 52
+Q+L F SF+A++ F V+T R+P+ S VF I + V + GL
Sbjct: 220 LQALPFITVSFLAVLL-FTVITSLKRDPVTSKPWEAAFGVFCPILSLVASFGLLFWCNFP 278
Query: 53 FVAMITLVVYVG-AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN 111
F+ ++ +V ++ A+ V +FI + + P ++R G + I +N
Sbjct: 279 FLPIVCVVPFLVLAIGVDDVFIFLHCYHRTDPRLPVEERIGKMLAEAG--PSITITSLTN 336
Query: 112 FMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL----------LLSMIGAI 161
F+ F+ + + I + Y Y + + IL L + I I
Sbjct: 337 FLSFAISIFTPTPAIQIFSA-YISVAVVFDYTYQIFLYSAILTFGAHREKKHLHAFIPCI 395
Query: 162 VLMLRHRRDIKRQD 175
+ +R +K Q
Sbjct: 396 SISETEKRSLKTQS 409
>gi|107122084|ref|YP_626378.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|93140475|sp|Q2I3G3|NU6M_ELEMA RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|83415402|gb|ABC17902.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|148283475|gb|ABQ57322.1| NADH dehydrogenase subunit 6 [Elephas maximus]
Length = 175
Score = 35.0 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 67/169 (39%), Gaps = 10/169 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + ++ + +P+Y SL+ + G+ + G F+ ++ +VY+G ++V
Sbjct: 6 FIMSVLYVVGFIGFSSKPSPVYGGMSLVVSGGLGCGIIMSSGGSFLGLVVFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSAEGELSRL 124
F + I M + ++ ++V + + F G S +
Sbjct: 66 VFGYTIAMATEEYPETWGSNVVVLSAFLVGLLMEVFMVVWLFSGEHELVGFYFGGLESFV 125
Query: 125 VFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
E + G LY+ + L ++G++L +S+ A + +
Sbjct: 126 TLGEGGFEYVREDYSGGASLYSCGFWFLAMAGWMLFVSIFIATEITRKR 174
>gi|56548717|ref|YP_161245.1| NADH dehydrogenase subunit 6 [Perameles gunnii]
gi|56398558|emb|CAG26431.1| NADH dehydrogenase subunit 6 [Perameles gunnii]
Length = 166
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 42/105 (40%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + +LFS + I + +P+Y SL+ + + + LG F+ ++ +VY
Sbjct: 1 MKMMIIFLFSVLLIFGFVAFASKPSPVYGGLSLVVSGGVGCAIVVSLGNTFLGLVMFLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
+G ++V F + M + F ++ +
Sbjct: 61 LGGMLVVFGYTAAMATEEYPETWVGNMVAFSMFVVTLLIEVVWYI 105
>gi|16797936|gb|AAL29220.1| NADH dehydrogenase subunit 6 [Tringa totanus]
Length = 173
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 66/166 (39%), Gaps = 1/166 (0%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+L ++ V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 6 FLLGMCFVLGGLAVASNPSPYYGVVGLVLASVAECGWLLSLGVSFVSLVLFMVYLGGMLV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F++ + + A + G F+ ++ ++V
Sbjct: 66 VFVYSVSLAADPFPEAWGDWRVVGYGVSFVLVVVVGMVVGGLVECWKLGVITDDSGGMFS 125
Query: 129 NNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G + Y+ ++G+ LLL++ + L+ R R
Sbjct: 126 VRLDFSGVAMFYSDGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|154315579|ref|XP_001557112.1| hypothetical protein BC1G_04362 [Botryotinia fuckeliana B05.10]
gi|150847302|gb|EDN22495.1| hypothetical protein BC1G_04362 [Botryotinia fuckeliana B05.10]
Length = 550
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 60/190 (31%), Gaps = 32/190 (16%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ + + F + + II +L S +LI A+G L A
Sbjct: 1 MAERVRFSIAQPITIIGWYL---------SSLALIGLTACASGPLTLPSPPDHAYTQAFY 51
Query: 62 YVG-----AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS 116
Y +V L +I + K + + L+ + VFS
Sbjct: 52 YALFSAGLYFLVASLMVITVYGAHKGHYPKEFKLTMSQRTLMLQTISFLVYLLAGAAVFS 111
Query: 117 AEGELSRL--------------VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIV 162
L + + ++G+ L +P I G I+L +IG+I
Sbjct: 112 HVESWQYLDALYWCDFTLLTVGIGDYAPMTHLGRSL----LFPFAIGGIIILGLVIGSIR 167
Query: 163 LMLRHRRDIK 172
++ R +K
Sbjct: 168 SLVLERGKVK 177
>gi|5835313|ref|NP_007353.1|ND6_11617 NADH dehydrogenase subunit 6 [Arbacia lixula]
gi|1321885|emb|CAA56606.1| NADH dehydrogenase subunit 6 [Arbacia lixula]
Length = 162
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 8/159 (5%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
YL ++ S LV +P YS L+ ++ L+G F+A++ L+VY+G +
Sbjct: 2 IIYLSLVCLLVGSTLVFYSLSPYYSALGLVVVSISGCISLSLIGGSFIALVLLLVYMGGM 61
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F + + + R S IG+ A +F + S +
Sbjct: 62 LVVFAYSSAI-------SAERFPSVSNISEVIGLSAFFSSWVFLSFDNLNETSNCSSTII 114
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
V + Y + + + FIL + ++GA+++
Sbjct: 115 SNEGVLG-SSIFYNDGSVLVVLGVFILFIVLVGALIISR 152
>gi|81230413|ref|YP_398765.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|93140476|sp|Q38PR1|NU6M_MAMPR RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|75914862|gb|ABA29795.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|83415388|gb|ABC17889.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367508|gb|ABV45638.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367576|gb|ABV45680.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367590|gb|ABV45693.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367604|gb|ABV45706.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367632|gb|ABV45732.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367646|gb|ABV45745.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367660|gb|ABV45758.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367702|gb|ABV45797.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
Length = 175
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 10/169 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + ++ + +P+Y SLI + G+ + G F+ ++ +VY+G ++V
Sbjct: 6 FIMSVLYVVGFIGFSSKPSPVYGGMSLIVSGGLGCGIIMSSGGSFLGLVVFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSAEGELSRL 124
F + I M + ++ +IV + + F G +
Sbjct: 66 VFGYTIAMATEEYPETWGSNVVVLSAFLVGLLMEIFMIVWLFSGEHELVGFYFGGLEDLV 125
Query: 125 VFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V + + G LY+ + L ++G++L +S+ AI + +
Sbjct: 126 VLGEGSFGYVREDYSGGASLYSYGFWFLAMAGWMLFVSIFIAIEVTRKR 174
>gi|323490297|ref|ZP_08095512.1| monovalent cation/H+ antiporter subunit A [Planococcus donghaensis
MPA1U2]
gi|323395967|gb|EGA88798.1| monovalent cation/H+ antiporter subunit A [Planococcus donghaensis
MPA1U2]
Length = 800
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 64/158 (40%), Gaps = 2/158 (1%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L + + I++ ++ ++ + +V + A F+L A +A+ LV+ ++F
Sbjct: 630 LLTAVMAIAAISILFAKSHLAAVLLNGVLGFSIAIFFVLFRAPDLALTQLVIETVTTVLF 689
Query: 70 FLFIIMMLDIDIEVAEPRKKR-GFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
L + + + E + R K + G+ + + ++ +F + ++
Sbjct: 690 LLCFLFLPEWTAEDSSKRTKFRNAFIAIGAGVTITLIGLTVNSGKLFESISGYFENSYEL 749
Query: 129 NNVENIGKVLYTQY-AYPLEISGFILLLSMIGAIVLML 165
+NI + + A+ + +L ++ +G L+
Sbjct: 750 AGGDNIVNAILGDFRAFDTMLESLVLFIAGLGVYTLIR 787
>gi|280978306|ref|YP_003345241.1| NADH dehydrogenase subunit 6 [Tragopan caboti]
gi|269975405|gb|ACZ55627.1| NADH dehydrogenase subunit 6 [Tragopan caboti]
Length = 173
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 54/147 (36%), Gaps = 1/147 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ + V + +P Y V L+ A V G + LG F+++ +VY+G
Sbjct: 2 TYFVIFLGICFMLGALAVASNPSPYYGVVGLVLASVVGCGWLVNLGVSFISLALFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ + +
Sbjct: 62 GMLVVFVYSVSLAADPYPEAWGDWRVVGYGLGFVLVVCMGALWGGVVDFWKVGVATVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISG 150
++ G ++ + ++G
Sbjct: 122 GASFVRLDFSGVAVFYSWGVGLFLVAG 148
>gi|257053289|ref|YP_003131122.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Halorhabdus
utahensis DSM 12940]
gi|256692052|gb|ACV12389.1| NADH-ubiquinone/plastoquinone oxidoreductase chain 6 [Halorhabdus
utahensis DSM 12940]
Length = 182
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 10/155 (6%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
+ + V R+ + S+ SL A V A F L GA A+ VV G V V FL
Sbjct: 10 VATVGLALSAVAARDFLVSILSLSGASVALAVYFYLAGAPIAAVFEAVVAAGLVTVLFLL 69
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVE 132
+I + D + ++K +G +L L+V + S G
Sbjct: 70 MISLTDAETATLIEQRKLPIVGLALGALLGVGLVVWGLLGGLSSGGGSE----------M 119
Query: 133 NIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
+ + L+ + + L +L + ++G I L
Sbjct: 120 ELAEALWAERSVDLLAVTVLLFVGVLGIIRLTAER 154
>gi|213136135|gb|ACJ43685.1| NADH dehydrogenase subunit 6 [Mertensiella caucasica]
Length = 173
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 47/123 (38%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
+P Y+ F L+ A + L + LG F+++I ++VY+G ++V F + A
Sbjct: 24 SPYYAAFGLVLASFSGCCLLVELGVCFLSLILVLVYMGGMMVVFAYAASFSAEPFPEAWG 83
Query: 87 RKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPL 146
+ + I++ + ++ L + + G + + L
Sbjct: 84 SWSVLAYMTKYFVIISLVGVWLLNSNFSVELIFGNYSLTIEVVGCDWGGAGIMYVFGGLL 143
Query: 147 EIS 149
++
Sbjct: 144 LLA 146
>gi|37596493|gb|AAQ95007.1| NADH dehydrogenase subunit 6 [Euschistospiza cinereovinacea
cinereovinacea]
Length = 159
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|5835959|ref|NP_008724.1|ND6_15092 NADH dehydrogenase subunit 6 [Falco peregrinus]
gi|3600005|gb|AAC35510.1| NADH dehydrogenase subunit VI [Falco peregrinus]
Length = 175
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 70/174 (40%), Gaps = 2/174 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
MVM F + + V + +P Y V L+ V G + LG F++++ +
Sbjct: 1 MVMTYFVF-FLGVCFVFGALAVASNPSPYYGVVGLVLGSVVGCGWLMSLGVSFISLVLFM 59
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
VY+G ++V F++ + + A + G I +L ++ S + G
Sbjct: 60 VYLGGMLVVFVYSVALAADPFPEAWGNWRVVGCGVGLILLLFVGAVIGGSVGYLSPGVGT 119
Query: 121 LSRLVFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ +++ G ++ Y I+G+ LLL++ + L+ R R
Sbjct: 120 VDSGGVVSVRLDSSGVAMFYFYGVGMFFIAGWGLLLTLFVVLELVRGLSRGAIR 173
>gi|84488719|ref|YP_448778.1| NADH dehydrogenase subunit 6 [Cygnus columbianus]
gi|67005520|gb|AAY62378.1| NADH dehydrogenase subunit 6 [Cygnus columbianus]
Length = 173
Score = 35.0 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 69/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + + V + +P Y V L+ A V G L LG FVA++ +VY+G
Sbjct: 2 AYFMFFLGICFAVGVLGVASNPSPYYGVVGLVLASVAGCGWLLGLGVSFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + + F+ ++ L+ ++ +
Sbjct: 62 GMLVVFVYSVALAAEPFPEAWGDWRVIGYAAAFVAVVFVGLVFGGFMGSWKFGVVTVNNV 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G + Y+ A ++G+ LLL++ + L+ R R
Sbjct: 122 GLSVIRLDFSGVSMFYSHGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|37496445|emb|CAD21984.1| NADH dehydrogenase subunit 6 [Procavia capensis]
Length = 179
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 15/172 (8%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + ++ + +PI+ I + +GL + G F+ ++ ++Y+G ++V
Sbjct: 6 FILSVVFVLGFVGFSSKPSPIFGGLVFIVSGGVGSGLIVSSGGSFLGVVMFLIYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN---------FMVFSAEG 119
F + M + + F F + +++ N +V++ G
Sbjct: 66 VFGYTTAMATEEYPESWVSNWVVFGSLFLGVLFEVLVVIWVLNEGKCYLPDRGLVYNFWG 125
Query: 120 ELSRLVFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
LV V + G LY + + SGF+L +S+I + +
Sbjct: 126 LEDWLVLGEEGVGVVREDYSGGYALYGPGCWLVTASGFVLFISIIIIMEVTR 177
>gi|116733728|gb|ABK19921.1| NADH dehydrogenase subunit 6 [Ichthyomyzon unicuspis]
gi|116733730|gb|ABK19922.1| NADH dehydrogenase subunit 6 [Ichthyomyzon fossor]
gi|116733732|gb|ABK19923.1| NADH dehydrogenase subunit 6 [Ichthyomyzon fossor]
gi|116733734|gb|ABK19924.1| NADH dehydrogenase subunit 6 [Ichthyomyzon fossor]
gi|116733736|gb|ABK19925.1| NADH dehydrogenase subunit 6 [Ichthyomyzon fossor]
Length = 172
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 65/167 (38%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F M ++ +VV +P YS L+F V + L G F++++ +++Y+G +
Sbjct: 4 LILCFFMMFLLGVVVVVLSPSPYYSALGLVFVAVFGCFIILYHGGTFLSLVLVLLYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V F++ + + F + + + F E +
Sbjct: 64 MVVFVYSAALAADPYPEVLGGRVAWFFLICVLCVCFVGYMSFNGLFFDVLVECDGVDYTG 123
Query: 127 KGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
VE +G + + L ++G+ LL+ + +V++ R R
Sbjct: 124 GIFGVEWLGVTTFYEMGLILMLAGWSLLVCLFSVLVVVQGLSRGALR 170
>gi|16797923|gb|AAL29214.1| NADH dehydrogenase subunit 6 [Tringa glareola]
Length = 173
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 69/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F +L ++ V + +P Y V L+ A + G L LG FV+++ +VY+G
Sbjct: 2 TYFVFLLGLCFVLGGLAVASNPSPYYGVVGLVLASIAGCGWLLSLGISFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ ++V +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGVGFVLVVVVGMVVGGLVECWKLGVVTVDSG 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G + Y+ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSDGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|288903391|ref|YP_003434114.1| NADH dehydrogenase subunit 6 [Epinephelus septemfasciatus]
gi|219562633|gb|ACL27781.1| NADH dehydrogenase subunit 6 [Epinephelus septemfasciatus]
Length = 173
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 51/151 (33%), Gaps = 3/151 (1%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + F + I+ + V + +P + L+ G+ + G+ F+A+I +
Sbjct: 1 MCFVIICFLIC---WIVGAIAVASNPSPFFGALGLVMVAGVGCGVLVEYGSPFLALILFL 57
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
+Y+G ++V F + + + S + ++ S + +
Sbjct: 58 IYLGGMLVVFAYSAALAAEPYPESWLNPGVVSYVSCYAAVVVWVSSKFWSEWSDAFSGPA 117
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGF 151
F ++ G + + + G
Sbjct: 118 DEWGPFCVFRADSGGVAVMYSEGGWMLVVGA 148
>gi|108793306|ref|YP_637034.1| NADH dehydrogenase subunit 6 [Dactylopsila trivirgata]
gi|94481185|dbj|BAE93991.1| NADH dehydrogenase subunit 6 [Dactylopsila trivirgata]
Length = 167
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 43/106 (40%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + +LFS + I + +PIY SL+ + + + LG F+ ++ +VY
Sbjct: 1 MEMMVIFLFSVLLIFGFVAFASKPSPIYGGLSLVASGGLGCAMVVSLGDIFLGLVVFMVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
+G ++V F + M + + F F ++
Sbjct: 61 LGGMLVVFGYTAAMATEEYPESWVGNTVAFSMLLFALLVEVAWFFV 106
>gi|56548689|ref|YP_161219.1| NADH dehydrogenase subunit 6 [Pseudocheirus peregrinus]
gi|56398530|emb|CAG26405.1| NADH dehydrogenase subunit 6 [Pseudocheirus peregrinus]
Length = 167
Score = 35.0 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 58/156 (37%), Gaps = 1/156 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + +LFS + I + +P+Y SL+ + + + L F+ +I ++Y
Sbjct: 1 MKMMVIFLFSILLIFGFVAFASKPSPVYGGLSLVVSGGLGCAIVVSLEDTFLGLIVFLIY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+G ++V F + M + + F + V A + +
Sbjct: 61 LGGMLVVFGYTAAMATEEYPESWVGNSVALSMLLFALLAEVMWFVVAEDVEITMTVELFD 120
Query: 123 RLVFKGNNVENIGKVLYTQY-AYPLEISGFILLLSM 157
L + G L + L + G+IL +++
Sbjct: 121 SLGGYCVGQDCSGVSLLYGCGGWALVLLGWILFITI 156
>gi|161561793|ref|YP_001586270.1| NADH dehydrogenase subunit 6 [Tachybaptus novaehollandiae]
gi|143024869|gb|ABO93134.1| NADH dehydrogenase subunit 6 [Tachybaptus novaehollandiae]
Length = 173
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 66/170 (38%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G L LGA FV+++ +VY+G
Sbjct: 2 AYFVLFLGVCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGASFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + + G + ++ +V +
Sbjct: 62 GMLVVFVYSVSLAADPFPEVWWDWGVVWYGIGLVLVIVVGGVVGGVFDGWKFGVVTVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEIS-GFILLLSMIGAIVLMLRHRRDIKR 173
++ G L+ + + + G+ LLL++I + L+ R R
Sbjct: 122 GMFSVRLDFSGVALFYSWGVGMLMVEGWGLLLTLIVVLELVRGLSRGAIR 171
>gi|327492959|ref|YP_004347912.1| NADH dehydrogenase subunit 6 [Monotrete cochinchinensis]
gi|327392460|dbj|BAK09897.1| NADH dehydrogenase subunit 6 [Monotrete cochinchinensis]
Length = 173
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 45/124 (36%)
Query: 27 NPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEP 86
+P + SL+ G+ + G F++++ ++Y+G ++V F + +
Sbjct: 24 SPYFGALSLVVVAAFGCGILVWHGGSFLSLVLFLIYLGGMLVVFAYSAALAAEPYPETLG 83
Query: 87 RKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPL 146
++GI+ ++ + +S + + + +G Y +
Sbjct: 84 SWPVLVSMLMYVGIVVLVFVLFLGGWEGYSWAVVDEADWYSMSRGDVVGVAFMYSYGGGM 143
Query: 147 EISG 150
+ G
Sbjct: 144 LVVG 147
>gi|313672492|ref|YP_004050603.1| multicomponent na+-h+ antiporter subunit a [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939248|gb|ADR18440.1| putative multicomponent Na+-H+ antiporter subunit A
[Calditerrivibrio nitroreducens DSM 19672]
Length = 176
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 43/120 (35%), Gaps = 2/120 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + LF IIS+FL V ++ + S +L A L+ L A VA + V
Sbjct: 1 MTVIIDILFLTFLIISAFLSVYFKDLLNSTIALSAYSFFVAVLWTTLNAVDVAFTEVAVG 60
Query: 63 VGAVIVFFLFIIMMLDI--DIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
G V L ++ +D +V + RK F G L NF
Sbjct: 61 AGVSTVLLLAVLSKIDRVEKNQVTKDRKIIALTVVFMTGYLLLLATQDMPNFGDPGWVTN 120
>gi|280978362|ref|YP_003345293.1| NADH dehydrogenase subunit 6 [Hoplunnis punctata]
gi|271280776|dbj|BAI53469.1| NADH dehydrogenase subunit 6 [Hoplunnis punctata]
Length = 172
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 1/171 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M F F M ++ V + +P ++ L+ + G+ G FV+++ ++Y
Sbjct: 1 MSYFIFLFF-VMFVLGVIGVASNPSPYFAALGLVLSAGGGCGILAGYGGSFVSLVLFLIY 59
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+G ++V F + + + I+ + + + +
Sbjct: 60 LGGMLVVFAYSAALAAEPYPEGWGDWSVFGRILGCVLIVFLGVCLGGGRSNYYCGVVDEY 119
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + +Y L + G+ LLL++ + L R R
Sbjct: 120 HGLSALRGDFSGVSFMYNLGGEMLIVCGWALLLTLFVVLELTRGLSRGALR 170
>gi|156766032|ref|YP_001434587.1| NADH dehydrogenase subunit 6 [Asymmetron sp. A TK-2007]
gi|156713119|dbj|BAF76618.1| NADH dehydrogenase subunit 6 [Asymmetron sp. A TK-2007]
Length = 167
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 67/163 (41%), Gaps = 6/163 (3%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
L SFM +++S +V+ ++P + ++ F + + + + F AMI +++Y+G ++V
Sbjct: 5 LLSFMILLTSMMVIRAKSPYFGALAMAFLSLLISIMMFQMNLIFSAMILVLIYLGGMLVV 64
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ A+ L + L ++ S + E +
Sbjct: 65 FVYST------AYSADLIPLPMNLTLTVLVALIGTTLITLSPLSTMESFCETNSWTPFMV 118
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK 172
N ++ LY + ++ +L + + + ++ + IK
Sbjct: 119 NYNSLLFDLYERGYLAFTLAILVLTILLFSILEIVSHRQMTIK 161
>gi|37596431|gb|AAQ94976.1| NADH dehydrogenase subunit 6 [Lagonosticta senegala rhodopsis]
Length = 159
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|37596443|gb|AAQ94982.1| NADH dehydrogenase subunit 6 [Pytilia melba citerior]
Length = 159
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|73663132|ref|YP_301913.1| monovalent cation/H+ antiporter subunit A [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|123775329|sp|Q49W91|MNHA1_STAS1 RecName: Full=Na(+)/H(+) antiporter subunit A1; AltName: Full=Mnh
complex subunit A1
gi|72495647|dbj|BAE18968.1| Na+ H+ antiporter subunit [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 805
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 38/100 (38%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ + I ++ +++ ++ ++S+ + A F+ GA +A+ VV + +F
Sbjct: 627 IIVVLIITAASMIIFAKSRLFSIIMASAVGYSVAIFFIFFGAPDLALTQFVVESISTALF 686
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCA 109
L + +++ K + + ++
Sbjct: 687 LLCFYHLPNLNRHKETRSFKLVNIVISVGAGIVVTVLGLI 726
>gi|323492993|ref|ZP_08098130.1| hypothetical protein VIBR0546_16221 [Vibrio brasiliensis LMG 20546]
gi|323312772|gb|EGA65899.1| hypothetical protein VIBR0546_16221 [Vibrio brasiliensis LMG 20546]
Length = 224
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 7/150 (4%)
Query: 36 IFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS 95
+ + LFL+L A ++ + A+ F +++
Sbjct: 21 LLGLFSIGCLFLMLYAP--GWQQALLTIIAITCLIGFGYLLVLKSTVRFTLTASHFQQHL 78
Query: 96 FFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLL 155
F G + + + +G L + G V+N L + I+ ILL
Sbjct: 79 FKGGWVLKWNNISKIGICHYDQDGWQQPLPWIGVRVKNYSPYLESICPR---IATEILLS 135
Query: 156 SMIGAIVLMLRHRRDIKRQDI--SKQLESN 183
+ +H++ + +DI Q+ N
Sbjct: 136 QRALLYLGARQHQQGERFEDIVLDSQIYRN 165
>gi|126792914|gb|ABO27313.1| NADH dehydrogenase subunit 6 [Bolborhynchus lineola]
Length = 171
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 68/169 (40%), Gaps = 1/169 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++++ LV + +P Y V L+F V G + LGA FV+++ +VY+G
Sbjct: 2 AYFVLLLGVGFVLAALLVASNPSPYYGVVGLVFGSVVGCGWLVSLGASFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + + + +L V + + +
Sbjct: 62 GMLVVFVYSVSLAADPFPQVWGGWRVVGYALGLVCVLGVGWAVWGWGSGLGVCTVDSIGV 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
F + + + Y+ +G+ LLL++ + L+ R R
Sbjct: 122 FFVRLDFGGVA-MFYSYGGGMFLTAGWGLLLTLFVVLELVRGLSRGAIR 169
>gi|225424512|ref|XP_002285238.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297737561|emb|CBI26762.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 42/137 (30%), Gaps = 2/137 (1%)
Query: 31 SVFSLIFAFVN-AAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKK 89
+ L F F+N A ++ A I ++V + ++ L ++ + AE +
Sbjct: 370 APLFLTFCFLNTVAIIYSATAALPFGTIVVIVLIWTLVTSPLLVLGGIAGKNSKAEFQAP 429
Query: 90 RGFLGS-FFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEI 148
I L M + G +YT Y+ +
Sbjct: 430 CRTTKYPREIPALPWYRSTIPQMAMAGFLPFSAIYIELYYIFASVWGHRIYTIYSILFIV 489
Query: 149 SGFILLLSMIGAIVLML 165
+L+++ + L
Sbjct: 490 FIILLIVTAFITVALTY 506
>gi|148274179|ref|YP_001220615.1| hypothetical protein pAb5S9_16 [Aeromonas bestiarum]
gi|146453410|gb|ABQ41452.1| TraG [Aeromonas bestiarum]
Length = 837
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 42/138 (30%), Gaps = 3/138 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGA---EFVAMIT 58
+M + FFYL + +NP+ +L +F+ + + +LL +
Sbjct: 237 IMTAWFFYLILICFFGAYIAYKRRQNPVLVALALGLSFLPTSVVMMLLYIFIPQIPGFAM 296
Query: 59 LVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
L + VG + +L + + + G++ V A + +
Sbjct: 297 LAITVGGTVATYLNAGKVFNWLANSIGSQTSTARRLRTIGGVIDNLRGVSAPVTKMGATA 356
Query: 119 GELSRLVFKGNNVENIGK 136
+ +
Sbjct: 357 VQPDNTALDEAGSHGSAR 374
>gi|1171850|sp|P43206|NU6M_SYNWU RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394688|emb|CAA52124.1| NADH dehydrogenase subunit 6 [Synthliboramphus wumizusume]
Length = 173
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 66/162 (40%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFMLFLGLCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G FI +LAA +V + +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGVSFIVVLAAGAVVGGLAGCWDLGVITVDSV 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLML 165
++ G ++ ++G+ LLL++ + L+
Sbjct: 122 GMFSVRLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVR 163
>gi|314933164|ref|ZP_07840529.1| Na+/H+ antiporter, MnhA component [Staphylococcus caprae C87]
gi|313653314|gb|EFS17071.1| Na+/H+ antiporter, MnhA component [Staphylococcus caprae C87]
Length = 801
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 37/98 (37%)
Query: 13 FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLF 72
+++SFL++ ++ ++S+ L + LF+ A +A+ VV + +F L
Sbjct: 630 LFLLVASFLIIFAKSRLFSIIMLSAVGYAISVLFIFFKAPDLALTQFVVESISTALFLLC 689
Query: 73 IIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
+ +++ K L ++
Sbjct: 690 FYHLPNLNRYNESSAFKINNAIISAGVGLVVIILGLIG 727
>gi|238550577|gb|ACR44429.1| NADH dehydrogenase subunit 6 [Tragopan temminckii]
Length = 173
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 54/147 (36%), Gaps = 1/147 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ + V + +P Y V L+ A V G + LG F+++ +VY+G
Sbjct: 2 TYFVIFLGICFMLGALAVASNPSPYYGVVGLVLASVVGCGWLVNLGISFISLALFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ + +
Sbjct: 62 GMLVVFVYSVSLAADPYPEAWGDWRVVGYGLGFVLVVCMGALWGGVVDFWKVGVVTVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISG 150
++ G ++ + ++G
Sbjct: 122 GASFVRLDFSGVAVFYSWGVGLFLVAG 148
>gi|166093151|gb|ABY82580.1| NADH dehydrogenase subunit 6 [Tyto alba]
Length = 172
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 70/169 (41%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + + ++ +V + +P + L+ A V+ L LGA F+A++ +VY+G
Sbjct: 2 TYFMFFWGASLVLGGLVVASNPSPYFGAVGLVVASVSGCIWLLSLGASFIALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A ++ I +L A ++ F S
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDRRVLGYSVGLISVLVAGVVWGVGGFGGPGVITVDSWG 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + + Y+Q + ++G+ L +++ + L+ R R
Sbjct: 122 LDSVRLDFSGVAIFYSQGVWVFLVAGWGLFMTLFVVLELVRGLSRGAIR 170
>gi|322823913|gb|EFZ29513.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 885
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 47/143 (32%), Gaps = 4/143 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFL-LLGAEFVAMITLVV 61
+ S+ F+ + + + ++ R P SV N G+ L L G + ++
Sbjct: 654 LSSVVFFFAITVFLRKTLGTISCRAPWRSVSY--TTMFNLDGIMLTLFGYFMLVLLATFA 711
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI-VCASNFMVFSAEGE 120
+ + + + A P + + + + +++
Sbjct: 712 FALVYSRWHTREEIEAHVQEFQALPEFWTFRNTTKVVAVYVIGIGQALCLGYLMKLWIYR 771
Query: 121 LSRLVFKGNNVENIGKVLYTQYA 143
S +V+ +IG VLY +
Sbjct: 772 TSNVVWNWEASPSIGAVLYMTFL 794
>gi|164421068|ref|YP_001648434.1| NADH dehydrogenase subunit 6 [Odontobutis platycephala]
gi|62902043|gb|AAY18982.1| NADH dehydrogenase subunit 6 [Odontobutis platycephala]
Length = 173
Score = 35.0 bits (79), Expect = 6.5, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M + F S + I VV+ +P ++ L+ A GL + GA F++++ ++Y
Sbjct: 1 MSYIMFIFMSGL-IGGLVGVVSNPSPYFAAVGLVVASGAGCGLLVGHGAPFLSLVLFLIY 59
Query: 63 VGAVIVFFLFIIMM 76
+G ++V F + +
Sbjct: 60 LGGMLVVFAYSAAL 73
>gi|110747785|gb|ABG89400.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747789|gb|ABG89403.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747793|gb|ABG89406.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747797|gb|ABG89409.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747809|gb|ABG89418.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747813|gb|ABG89421.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747817|gb|ABG89424.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747821|gb|ABG89427.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747833|gb|ABG89436.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747837|gb|ABG89439.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747845|gb|ABG89445.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747849|gb|ABG89448.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747861|gb|ABG89457.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747877|gb|ABG89469.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747901|gb|ABG89487.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747913|gb|ABG89496.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747917|gb|ABG89499.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747945|gb|ABG89520.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747957|gb|ABG89529.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747961|gb|ABG89532.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747969|gb|ABG89538.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748001|gb|ABG89562.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748005|gb|ABG89565.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748009|gb|ABG89568.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748013|gb|ABG89571.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748025|gb|ABG89580.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748029|gb|ABG89583.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748037|gb|ABG89589.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748049|gb|ABG89598.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748073|gb|ABG89616.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748077|gb|ABG89619.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748081|gb|ABG89622.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748085|gb|ABG89625.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748105|gb|ABG89640.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748109|gb|ABG89643.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748125|gb|ABG89655.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748129|gb|ABG89658.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748133|gb|ABG89661.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748145|gb|ABG89670.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748157|gb|ABG89679.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748165|gb|ABG89685.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748181|gb|ABG89697.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748185|gb|ABG89700.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748193|gb|ABG89706.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748213|gb|ABG89721.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|218783291|dbj|BAH03669.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
Length = 175
Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 10/169 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + ++ + +P+Y SL+ + G+ + G F+ ++ +VY+G ++V
Sbjct: 6 FIMSVLYVVGFIGFSSKPSPVYGGMSLVVSGGLGCGIIMGSGGSFLGLVVFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSAEGELSRL 124
F + I M + ++ +I+ + M F G +
Sbjct: 66 VFGYTIAMATEEYPETWGSNVVVLGAFLVGLLMEVFMIMWLFSGEHELMGFYFGGLEDLM 125
Query: 125 VFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V E + G LY+ + L ++G++L +S+ AI + +
Sbjct: 126 VLGEEGFEYVREDYSGGASLYSYGFWFLAMAGWMLFVSIFIAIEVTRKR 174
>gi|94490653|ref|YP_588184.1| NADH dehydrogenase subunit 6 [Synthliboramphus antiquus]
gi|90990881|dbj|BAE92874.1| NADH dehydrogenase subunit 6 [Synthliboramphus antiquus]
Length = 173
Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G + LG FV+++ +VY+G
Sbjct: 2 TYFMFFLGLCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLMSLGMSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G FI +LAA +V S + +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGVSFIVVLAAGAVVGGLVGCWDSGVITVDSV 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLML 165
++ G ++ ++G+ LLL++ + L+
Sbjct: 122 GMLSVRLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVR 163
>gi|5835469|ref|NP_008392.1|ND6_13342 NADH dehydrogenase subunit 6 [Florometra serratissima]
gi|2970433|gb|AAD05083.1| NADH dehydrogenase subunit 6 [Florometra serratissima]
Length = 164
Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 60/157 (38%), Gaps = 6/157 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y+ + S LV +P +S L+ +++ + LG F+A I L++Y+G +++
Sbjct: 4 YILVISLLFGSSLVFYSISPYFSALGLVTVSISSCLILSHLGISFLAFILLLIYMGGMLI 63
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F++ + + + + F + +
Sbjct: 64 VFIYSNALTNDRFPIISNINE------IFTLSFFLIFWTIFLLNNQNWNNINNNTNLSSS 117
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
N+E + + A ++G+ILL+++I + +
Sbjct: 118 INIEGASYLFHISMAPFFLLAGYILLITLIAVLDISR 154
>gi|5835510|ref|NP_007535.1|ND6_13719 NADH dehydrogenase subunit 6 [Rhea americana]
gi|3282077|emb|CAA76512.1| nicotinamide adenine dinucleotide dehydrogenase subunit 6 [Rhea
americana]
Length = 174
Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 67/172 (38%), Gaps = 1/172 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M S F + I+ + V + +P Y + L+ + G L LG F++++ +VY
Sbjct: 1 MTSYFVFFMGVSFILGALAVASNPSPYYGLLGLVVGSLVGCGWLLSLGVSFISLVLFLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+G ++V F++ + + A + + ++ ++V +
Sbjct: 61 LGGMLVVFVYSVSLAADPFPEAWGDWRVLGYSGGLLLVVLVGVVVGGGMGSELWGVNTVD 120
Query: 123 RLVFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ + I+G+ LLL++ + L+ R R
Sbjct: 121 SEGAVLVRMDFSGVAVFYSWGAGLFLIAGWGLLLTLFVVLELVRGLSRGAIR 172
>gi|71411790|ref|XP_808129.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70872268|gb|EAN86278.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 887
Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 47/143 (32%), Gaps = 4/143 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFL-LLGAEFVAMITLVV 61
+ S+ F+ + + + ++ R P SV N G+ L + G + ++
Sbjct: 657 LSSVVFFFAITVFLRKTLGTISCRAPWRSVSY--TTMFNLDGIMLTMFGYFMLVLLATFA 714
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI-VCASNFMVFSAEGE 120
+ + + + A P + + + + +++
Sbjct: 715 FALVYSRWHTREEIEAHVQEFQALPEFWTFRNTTKVVAVYVIGIGQALCLGYLMKLWIYR 774
Query: 121 LSRLVFKGNNVENIGKVLYTQYA 143
S +V+ +IG VLY +
Sbjct: 775 TSNVVWNWEASPSIGAVLYMTFL 797
>gi|288903402|ref|YP_003434125.1| NADH dehydrogenase subunit 6 [Candida maltosa]
gi|162401915|gb|ABX10007.1| NADH dehydrogenase subunit 6 [Candida maltosa]
Length = 147
Score = 35.0 bits (79), Expect = 6.7, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
S ++ +S+ L V + +P+ S+ ++I FV+ A G + ++ ++VYVGA+ + FL
Sbjct: 2 SIISGLSAILAVGLLSPVQSIVAMIILFVSVAITLYNTGFTLLGILYVLVYVGAIALLFL 61
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
FI+ +L+I ++ L+VC F +FS + +V
Sbjct: 62 FILSLLNIQ----------YTAAGGMNPLIIFLLLVCLVPFEIFSEPLGVVEIVQNNATE 111
Query: 132 ENI--GKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
E + G + YT+Y L + G IL+LS+IGAI +
Sbjct: 112 ELLTVGSLFYTEYGIILLLIGVILILSVIGAICITR 147
>gi|321472120|gb|EFX83091.1| hypothetical protein DAPPUDRAFT_240561 [Daphnia pulex]
Length = 595
Score = 34.6 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 14/125 (11%), Positives = 38/125 (30%), Gaps = 5/125 (4%)
Query: 31 SVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKR 90
S L+ + +L + + ++ Y+ ++ V +F +++ + P
Sbjct: 279 SAIFLVGTLL---VYSILPKMRNLHGVIVMCYLASMTVTNVFHAILMLVRGSDMPPGLCS 335
Query: 91 GFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYP--LEI 148
S +A+ + + V+ + + + P +
Sbjct: 336 TLAISLHFAYIASFSWLNVLCYGVWRMFSSIRPPKHTSVLGKQFFYSSLYGWGIPFVFVV 395
Query: 149 SGFIL 153
G IL
Sbjct: 396 VGQIL 400
>gi|37596513|gb|AAQ95017.1| NADH dehydrogenase subunit 6 [Mandingoa nitidula nitidula]
Length = 159
Score = 34.6 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|315304527|ref|ZP_07874785.1| Na(+)/H(+) antiporter subunit A [Listeria ivanovii FSL F6-596]
gi|313627098|gb|EFR95973.1| Na(+)/H(+) antiporter subunit A [Listeria ivanovii FSL F6-596]
Length = 205
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ ++ + + +++ +V ++ I S+ L + F++ A +A+ L+
Sbjct: 25 MTKVTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTVSIFFVISRAPDLALTQLI 84
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEG 119
+ +V V +L + L + E K IG+ +V S + +
Sbjct: 85 IETISV-VLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDS 142
>gi|307107121|gb|EFN55365.1| hypothetical protein CHLNCDRAFT_134407 [Chlorella variabilis]
Length = 1801
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 49/157 (31%), Gaps = 3/157 (1%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLL--GAEFVAMITLVVYVGAV 66
S + + + + +V A L++ L A + + +L +++ +V
Sbjct: 1408 IFISSGPAVGALRAIRALRILRAVKHATGLRRIATTLYITLPTLANAILVFSLFIFMFSV 1467
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+ LF + ++ F + + + +
Sbjct: 1468 LGTQLFYGVHPSSELMREGQGMTVFFNFQNVGNAMMMLTNAATGDNWEQYQLDTMVQPPD 1527
Query: 127 KGNNVENIGKVLYTQYAYPL-EISGFILLLSMIGAIV 162
++ G L + Y P + F+LL ++ +V
Sbjct: 1528 CDPAADDCGSPLASLYWVPFMIVCSFLLLSIVLAVVV 1564
>gi|19481564|gb|AAL88854.1|AF407121_1 NADH dehydrogenase subunit 6 [Bubalornis albirostris]
Length = 159
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGVCFVLGGLAVSSNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|312382834|gb|EFR28142.1| hypothetical protein AND_04265 [Anopheles darlingi]
Length = 1159
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 57/178 (32%), Gaps = 18/178 (10%)
Query: 8 FYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLL---GAEFVAMITLVVYVG 64
F+L + ++++ +VV R+P V V A +++ E M+ +++Y
Sbjct: 830 FFLLGALTLLNTAIVVATRDPSTGVADFGRQLVWGAVGWIIFFNDDYEQPYMLFVILYTT 889
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRG--------------FLGSFFIGILAAELIVCAS 110
A ++ + M L E + R F + I +
Sbjct: 890 AAVILLSPLKMDLSPAEEWWQFRTMPQKFLSVPAVSKYFQRCWLPFLVAIGLGSMWSVID 949
Query: 111 NFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHR 168
+ G + + E G + + + +L ++ VL+ R
Sbjct: 950 SIDESHMLGVPNGSDGDDTDGEVAGSKKPSDLFHTF-VRTILLAGDLLAIPVLIYSRR 1006
>gi|299829142|ref|YP_003735154.1| NADH dehydrogenase subunit 6 [Rhinochimaera pacifica]
gi|298110941|gb|ADI57890.1| NADH dehydrogenase subunit 6 [Rhinochimaera pacifica]
Length = 173
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 66/170 (38%), Gaps = 2/170 (1%)
Query: 6 LFFYLFSFMAIISSFLVVTVRN-PIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
++F + + I + V P + F L+ + GL G F++ + ++Y+G
Sbjct: 2 IYFVILMLVCFIMGLVAVASNPAPYFGAFGLVVSAAVGCGLLASHGTSFLSFVLFLIYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + + ++ + ++ ++ + + G
Sbjct: 62 GMLVVFVYSAALTAEPFPKSWWDRSVLINVLLYLAGVGVGVLYFYGDWNMLNWLGVDEFS 121
Query: 125 VFKGNNVENIGKVL-YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ G L Y+ L ++G+ILLL++ + L+ R R
Sbjct: 122 GLSLWRGDLSGTSLMYSSGVLLLILAGWILLLTLFVVLELIRGLSRGALR 171
>gi|60685279|gb|AAX34490.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685284|gb|AAX34494.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685289|gb|AAX34498.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685294|gb|AAX34502.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685299|gb|AAX34506.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685304|gb|AAX34510.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685309|gb|AAX34514.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685314|gb|AAX34518.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685319|gb|AAX34522.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685324|gb|AAX34526.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685329|gb|AAX34530.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685334|gb|AAX34534.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685339|gb|AAX34538.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685344|gb|AAX34542.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685349|gb|AAX34546.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685354|gb|AAX34550.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685359|gb|AAX34554.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685364|gb|AAX34558.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685369|gb|AAX34562.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685374|gb|AAX34566.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685379|gb|AAX34570.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685384|gb|AAX34574.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685389|gb|AAX34578.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685394|gb|AAX34582.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685399|gb|AAX34586.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685884|gb|AAX34974.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685889|gb|AAX34978.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685894|gb|AAX34982.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685899|gb|AAX34986.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685904|gb|AAX34990.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685909|gb|AAX34994.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685914|gb|AAX34998.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685919|gb|AAX35002.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685924|gb|AAX35006.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685929|gb|AAX35010.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685934|gb|AAX35014.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685939|gb|AAX35018.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685944|gb|AAX35022.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685949|gb|AAX35026.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685954|gb|AAX35030.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685959|gb|AAX35034.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685964|gb|AAX35038.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685969|gb|AAX35042.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685974|gb|AAX35046.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685979|gb|AAX35050.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685984|gb|AAX35054.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685989|gb|AAX35058.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685994|gb|AAX35062.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685999|gb|AAX35066.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686004|gb|AAX35070.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686009|gb|AAX35074.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686014|gb|AAX35078.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686019|gb|AAX35082.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686024|gb|AAX35086.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686029|gb|AAX35090.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686034|gb|AAX35094.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686039|gb|AAX35098.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686044|gb|AAX35102.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686049|gb|AAX35106.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686054|gb|AAX35110.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686059|gb|AAX35114.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686064|gb|AAX35118.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686069|gb|AAX35122.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686074|gb|AAX35126.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686079|gb|AAX35130.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686084|gb|AAX35134.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686089|gb|AAX35138.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686094|gb|AAX35142.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686099|gb|AAX35146.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686104|gb|AAX35150.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686109|gb|AAX35154.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686114|gb|AAX35158.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686119|gb|AAX35162.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686124|gb|AAX35166.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686129|gb|AAX35170.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686134|gb|AAX35174.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686139|gb|AAX35178.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686144|gb|AAX35182.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686149|gb|AAX35186.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686154|gb|AAX35190.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686159|gb|AAX35194.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686164|gb|AAX35198.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686169|gb|AAX35202.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686174|gb|AAX35206.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686179|gb|AAX35210.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686184|gb|AAX35214.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686189|gb|AAX35218.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686194|gb|AAX35222.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686199|gb|AAX35226.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686204|gb|AAX35230.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686209|gb|AAX35234.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686219|gb|AAX35242.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686224|gb|AAX35246.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686229|gb|AAX35250.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686234|gb|AAX35254.1| NADH dehydrogenase subunit 6 [Elephas maximus]
Length = 183
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 70/176 (39%), Gaps = 11/176 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
VM + F + S + ++ + +P+Y SL+ + G+ + G F+ ++ +V
Sbjct: 8 VMMYIVF-IMSVLYVVGFIGFSSKPSPVYGGMSLVVSGGLGCGIIMSSGGSFLGLVVFLV 66
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSA 117
Y+G ++V F + I M + ++ ++V + + F
Sbjct: 67 YLGGMMVVFGYTIAMATEEYPETWGSNVVVLSAFLVGLLMEVFMVVWLFSGEHELVGFYF 126
Query: 118 EGELSRLVFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
G S + E + G LY+ + L ++G++L +S+ A + +
Sbjct: 127 GGLESFVTLGEGGFEYVREDYSGGASLYSCGFWFLAMAGWMLFVSIFIATEITRKR 182
>gi|24119268|ref|NP_705936.1| hyaluronan synthase 2 [Danio rerio]
gi|10441760|gb|AAG17180.1|AF190742_1 hyaluronan synthase 2 [Danio rerio]
gi|72679388|gb|AAI00131.1| Hyaluronan synthase 2 [Danio rerio]
gi|169158180|emb|CAQ13472.1| hyaluronan synthase 2 [Danio rerio]
Length = 552
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 50/161 (31%), Gaps = 7/161 (4%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSL----IFAFVNAAGLFLLLG--AEFV 54
M +++ F F I ++ + + L + A + ++ L G
Sbjct: 376 MTYEAVITGFFPFFLIATAIQLFYQGRIWNILLFLLIVQVVALIKSSFASCLRGNIVMVF 435
Query: 55 AMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
V+Y+ +++ +F I ++ RK I I I+ +
Sbjct: 436 MSFYSVLYMSSLLPAKMFAIATINKSGWGTSGRKTVVVNFIGLIPISIWFTILFV-GIIY 494
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLL 155
+ V IG ++Y Y +L++
Sbjct: 495 TIIQETRKPFPESEKVVLIIGAIVYISYWVVFLTLYAVLIM 535
>gi|125985649|ref|XP_001356588.1| GA10302 [Drosophila pseudoobscura pseudoobscura]
gi|54644912|gb|EAL33652.1| GA10302 [Drosophila pseudoobscura pseudoobscura]
Length = 941
Score = 34.6 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 46/149 (30%), Gaps = 12/149 (8%)
Query: 27 NPIYSVFSLIFAFVNA------AGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDID 80
+P+ F+ AGL++ L +A L+ V +V +
Sbjct: 73 SPVALSMFSALVFIRVGYIVGNAGLYITLLQFLIAYGILLFTVASVCAISTNGAIEGGGV 132
Query: 81 IEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYT 140
+ F GS IG L V S + + G + + G L
Sbjct: 133 YFMISRTLGVEFGGS--IGTLFFFANVVGSAMAITGCTEAIMDNFGPGGHFVSDGATLPD 190
Query: 141 QYAYPLEISGFI----LLLSMIGAIVLML 165
+ S I LL+ ++GA +
Sbjct: 191 GDWWRFLTSSIINTCQLLVCLVGAALFAK 219
>gi|302348177|ref|YP_003815815.1| NADH-quinone oxidoreductase subunit J [Acidilobus saccharovorans
345-15]
gi|302328589|gb|ADL18784.1| NADH-quinone oxidoreductase subunit J [Acidilobus saccharovorans
345-15]
Length = 165
Score = 34.6 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 47/99 (47%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ S MAI S+ LVV +++ +Y+ +L A L + G V+ ++VYVGA ++
Sbjct: 13 IVLSIMAIASAMLVVRLKDLVYASITLAILGSFTAALLAVAGFGLVSAYLVLVYVGAAVM 72
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
F + I M+ + + + + + + +++
Sbjct: 73 FIVISISMIGPQGQESFDSFRGLTVAAALATFIITVVVI 111
>gi|156142580|gb|ABU52055.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
Length = 166
Score = 34.6 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 41/101 (40%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G + LG F++++ ++VY+G ++V
Sbjct: 1 FLGLCFVLGGLAVASNPSPXYGVLGLVVAAVAGCGWLVSLGVSFISLVLVMVYLGGMLVV 60
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
F++ + + A G ++ ++
Sbjct: 61 FVYSVSLAAEPYPEAWGSSGVVGYGFGMGLVVVVGFMMSGM 101
>gi|120586750|ref|YP_961406.1| NADH dehydrogenase subunit 6 [Elaphodus cephalophus]
gi|111380732|gb|ABH09747.1| NADH dehydrogenase subunit 6 [Elaphodus cephalophus]
Length = 175
Score = 34.6 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 63/174 (36%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIIFVLGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ A ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWLSNKAVLGAFITGLLMEAMMVYYVLKDEEVEIVFQF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|71662064|ref|XP_818044.1| dispersed gene family protein 1 (DGF-1) [Trypanosoma cruzi strain CL
Brener]
gi|70883272|gb|EAN96193.1| dispersed gene family protein 1 (DGF-1), putative [Trypanosoma cruzi]
Length = 3454
Score = 34.6 bits (78), Expect = 7.0, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIF---AFVNAAGLFLLLGAEFVAMITLVVYVGA 65
Y +++ V+ N + S F + +F+ A L ++ A +A A
Sbjct: 3315 YFCMAAVLLAGAGVIAFTNMMRSAFLTVIQTASFLLLAALCVVSAANHLAPSDGGARAYA 3374
Query: 66 VIVFFLFIIMM 76
IV L +M+
Sbjct: 3375 AIVLLLSTVML 3385
>gi|150024770|ref|YP_001295596.1| hypothetical protein FP0676 [Flavobacterium psychrophilum JIP02/86]
gi|149771311|emb|CAL42780.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 593
Score = 34.6 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 6/143 (4%)
Query: 35 LIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG 94
L ++ G+F A+F+ ++V +++ FF+ I+ML
Sbjct: 235 LGDVIISILGIF----AKFLGAFIVMVASISLLGFFVASIVMLFSSTMPDSFALNYISTP 290
Query: 95 SFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVL-YTQYAYPLEISGFIL 153
L + I+ F + + L N+++IG + Y+ + + ++
Sbjct: 291 IGLEIPLWIQGILFLLVFGIPFFFLLILGLKLLVTNLKSIGSIAKYSLLSLWIIALAILI 350
Query: 154 LLSMIGAIVLMLRHRRDIKRQDI 176
+L + A L + +++Q I
Sbjct: 351 VLGIKEATQLAFDGKV-VQKQSI 372
>gi|240102763|ref|YP_002959072.1| hypothetical protein TGAM_0706 [Thermococcus gammatolerans EJ3]
gi|239910317|gb|ACS33208.1| membrane bound oxidoreductase, MbxD subunit (MbxD) [Thermococcus
gammatolerans EJ3]
Length = 94
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 34/91 (37%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + Y+ + I+S+ L V R+ + + + + A+ LF +L A VAM
Sbjct: 1 MNCIACVEYIIVALMILSAVLAVEWRDLLAATVGMAAVSLFASILFFMLQAPDVAMTEAA 60
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRG 91
+ F+F I E +
Sbjct: 61 IGAALSGAVFIFAIKRTQRFETEEEEKPGWW 91
>gi|156142566|gb|ABU52048.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
Length = 166
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 36/79 (45%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G + LG F++++ ++VY+G ++V
Sbjct: 1 FLGLCFVLGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFISLVLVMVYLGGMLVV 60
Query: 70 FLFIIMMLDIDIEVAEPRK 88
F++ + + A
Sbjct: 61 FVYSVSLAAEPYPEAWGNF 79
>gi|60685824|gb|AAX34926.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685829|gb|AAX34930.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685834|gb|AAX34934.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685839|gb|AAX34938.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685844|gb|AAX34942.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685849|gb|AAX34946.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685854|gb|AAX34950.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685859|gb|AAX34954.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685864|gb|AAX34958.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685869|gb|AAX34962.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685874|gb|AAX34966.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60685879|gb|AAX34970.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686214|gb|AAX35238.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686239|gb|AAX35258.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686244|gb|AAX35262.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686249|gb|AAX35266.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686254|gb|AAX35270.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686259|gb|AAX35274.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686264|gb|AAX35278.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686269|gb|AAX35282.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686274|gb|AAX35286.1| NADH dehydrogenase subunit 6 [Elephas maximus]
gi|60686279|gb|AAX35290.1| NADH dehydrogenase subunit 6 [Elephas maximus]
Length = 183
Score = 34.6 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 69/176 (39%), Gaps = 11/176 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
VM + F + S + ++ + +P+Y SL+ + G+ + G F+ ++ +V
Sbjct: 8 VMMYIVF-IMSVLYVVGFIGFSSKPSPVYGGMSLVVSGGLGCGIIMSSGGSFLGLVVFLV 66
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSA 117
Y+G ++V F + I M + ++ ++V + + F
Sbjct: 67 YLGGMMVVFGYTIAMATEEYPETWGSNVVVLSAFLVGLLMEVFMVVWLFSGEHELVGFYF 126
Query: 118 EGELSRLVFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
G S + E + G LY + L ++G++L +S+ A + +
Sbjct: 127 GGLESFVTLGEGGFEYVREDYSGGASLYGCGFWFLAMAGWMLFVSIFIATEITRKR 182
>gi|156142564|gb|ABU52047.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
Length = 166
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 36/79 (45%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G + LG F++++ ++VY+G ++V
Sbjct: 1 FLGLCFVLGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFISLVLVMVYLGGMLVV 60
Query: 70 FLFIIMMLDIDIEVAEPRK 88
F++ + + A
Sbjct: 61 FVYSVSLAAEPYPEAWGNF 79
>gi|28301766|ref|NP_783566.1| NADH dehydrogenase subunit 6 [Muntiacus muntjak]
gi|28207788|gb|AAO32139.1| NADH dehydrogenase subunit 6 [Muntiacus muntjak]
Length = 175
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 63/174 (36%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIIFVLGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ A ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWLSSKAVLGAFITGLLMEAAMVYYVLKDEEVEIVFQF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|1171849|sp|P43205|NU6M_SYNHY RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394686|emb|CAA52126.1| NADH dehydrogenase subunit 6 [Synthliboramphus hypoleucus]
Length = 173
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 65/162 (40%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFMLFLGLCFVLGGLGVASNPSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G FI +L +++ + +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGVSFIAVLVVGVVIGGLVECWDLGVITVDSV 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLML 165
++ G ++ ++G+ LLL++ + L+
Sbjct: 122 GMFSVRLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVR 163
>gi|5834908|ref|NP_006976.1|ND6_10181 NADH dehydrogenase subunit 6 [Strongylocentrotus purpuratus]
gi|128823|sp|P15553|NU6M_STRPU RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|13676|emb|CAA31161.1| NADH dehydrogenase (ND6) subunit 6 [Strongylocentrotus purpuratus]
Length = 165
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y+ + + S LV +P YS L+ V + + LG+ FV ++ +VY+G ++V
Sbjct: 4 YVTLIVMLFGSTLVFYSLSPYYSALGLVVFSVPGSFVLSFLGSSFVPIVLFLVYIGGMLV 63
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + + + L F + +F LV
Sbjct: 64 VFPYSSAISPERFPSVNNLGEVVGLVFLFSSWVFMSFDNFQDLKNIFHCFVSGESLVGS- 122
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
Y + + F+LL++++GA+++
Sbjct: 123 -------NTFYNSGGVLVILGVFVLLVALVGALIISR 152
>gi|171683545|ref|XP_001906715.1| hypothetical protein [Podospora anserina S mat+]
gi|170941732|emb|CAP67386.1| unnamed protein product [Podospora anserina S mat+]
Length = 729
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 28/196 (14%), Positives = 66/196 (33%), Gaps = 35/196 (17%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
S+ F+L S + + + +SV + + ++ A L + + VG
Sbjct: 130 SIVFWLLSAL--------IYSQGFWHSVLASLMYVLSCAMLMVNM-------------VG 168
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
+ + D + F + G+ A ++ + FS L+
Sbjct: 169 YFKGHYPQKFELDDDQRTLILQTMSFFFWLAGGAGVFCALEGFTYADSLYFSQVTILTVG 228
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIV----------LMLRHRRDIKRQ 174
+ G+ + + +I G I L +IG++ ++ RHR+ +
Sbjct: 229 FGDFAPKTDSGRG----FLFAFQIIGVIFLGLVIGSLTRFAANISADKIIKRHRQHKRES 284
Query: 175 DISKQLESNPDNSIVM 190
+ + + S + +
Sbjct: 285 TVGRTVTSEKELRERL 300
>gi|19481588|gb|AAL88866.1|AF407133_1 NADH dehydrogenase subunit 6 [Molothrus bonariensis]
Length = 159
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGMCFVLGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|5081455|gb|AAD39390.1|AF123910_1 NADH dehydrogenase subunit 6 [Grus japonensis]
gi|224504078|gb|ACN53656.1| NADH dehydrogenase subunit 6 [Grus japonensis]
Length = 173
Score = 34.6 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 70/171 (40%), Gaps = 3/171 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFMFFMGMCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMML--DIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
++V F++ + + + R +G + I+ + + +
Sbjct: 62 GMLVVFVYSVSLAADPYPEAWGDWRVVGYIVGLVLVLIMGDGCWGVVEGWNLGVVTVDSG 121
Query: 123 RLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ + + + Y++ A ++G+ LLL++ + L+ R R
Sbjct: 122 GILSVRLDFSGVA-MFYSRGAGLFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|197311225|ref|YP_002154515.1| NADH dehydrogenase subunit 6 [Hyporhamphus sajori]
gi|197304258|dbj|BAG69218.1| NADH dehydrogenase subunit 6 [Hyporhamphus sajori]
Length = 173
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 62/173 (35%), Gaps = 3/173 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+ ++F+ F + +++ V + +P ++ L+ G+ + G F+++I ++
Sbjct: 1 MTYIIYFFFFGLILGLAA--VASNPSPYFAALGLVVVAGMGCGVLVSCGGSFLSLILFLI 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F + + + ++ + A ++ +
Sbjct: 59 YLGGMLVVFAYSAALAAEPYPEGWGSWPVLGVTVVYMLGVFAVAVLFWGGWYDGDWFSAD 118
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISGF-ILLLSMIGAIVLMLRHRRDIKR 173
+ G L L + G ILLL++ + L R R
Sbjct: 119 EFGELSTFRGDIGGVALMYSMGGGLLVLGAWILLLTLFVVLELTRGLSRGALR 171
>gi|13508744|emb|CAC35115.1| NADH dehydrogenase subunit 6 [Ficedula parva]
gi|14268392|emb|CAC39330.1| NADH dehydrogenase subunit 6 [Ficedula parva]
Length = 172
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+MQ + F I+ V + +P Y V L+ A + G + LG FV+++ ++V
Sbjct: 1 MMQFVLF--LGVCFILGGLAVASNPSPYYGVVGLVLASIAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|304320220|ref|YP_003853863.1| hypothetical protein PB2503_03227 [Parvularcula bermudensis
HTCC2503]
gi|303299123|gb|ADM08722.1| hypothetical protein PB2503_03227 [Parvularcula bermudensis
HTCC2503]
Length = 225
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 25/72 (34%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
+ ++ +F +V R + +A F+L+ A VA V G V
Sbjct: 23 FLLSLLVVCAFAMVVQRRLFAVAMLSGIYSLLSAVFFVLMDAVDVAFTEAAVGAGVSTVL 82
Query: 70 FLFIIMMLDIDI 81
L +M+
Sbjct: 83 VLSGMMLASRRE 94
>gi|157367452|gb|ABV45586.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367618|gb|ABV45719.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367674|gb|ABV45771.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367688|gb|ABV45784.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
Length = 175
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 10/169 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + ++ + +P+Y SLI + G+ + G F+ ++ +VY+G ++V
Sbjct: 6 FVMSVLYVVGFIGFSSKPSPVYGGMSLIVSGGLGCGIIMSSGGSFLGLVVFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSAEGELSRL 124
F + I M + ++ +IV + + F G +
Sbjct: 66 VFGYTIAMATEEYPETWGSNVVVLSAFLVGLLMEIFMIVWLFSGEHELVGFYFGGLEDLV 125
Query: 125 VFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V + + G LY+ + L ++G++L +S+ AI + +
Sbjct: 126 VLGEGSFGYVREDYSGGASLYSYGFWFLAMAGWMLFVSIFIAIEVTRKR 174
>gi|68989240|ref|YP_254711.1| NADH dehydrogenase subunit 6 [Cervus nippon yakushimae]
gi|67625647|dbj|BAD99598.1| NADH dehydrogenase subunit6 [Cervus nippon yakushimae]
Length = 175
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIIFVLGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWVSNKTVLGAFVTGLLMEVTMVYYVLKDEEVEIVFQF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|71651716|ref|XP_814530.1| dispersed gene family protein 1 (DGF-1) [Trypanosoma cruzi strain CL
Brener]
gi|70879510|gb|EAN92679.1| dispersed gene family protein 1 (DGF-1), putative [Trypanosoma cruzi]
Length = 3497
Score = 34.6 bits (78), Expect = 7.6, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 36/103 (34%), Gaps = 11/103 (10%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIF---AFVNAAGLFLLLGAEFVAM--------I 57
Y +++ VV N + S + +FV A L L+ A +A
Sbjct: 3325 YFCMAAVLLAGAGVVAFTNMMRSALLTVLQTASFVLLAALCLISAANHLAPSDGGARAYA 3384
Query: 58 TLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGI 100
T+V+ + AV+V M++ + + G +
Sbjct: 3385 TIVLLLAAVLVTVTVYSMVVWYAEDRHWQELREPRRGGLEALL 3427
>gi|281308240|gb|ADA58268.1| NADH dehydrogenase subunit 6 [Buteogallus aequinoctialis]
gi|281308242|gb|ADA58269.1| NADH dehydrogenase subunit 6 [Buteogallus aequinoctialis]
Length = 172
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 66/161 (40%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++ V + +P Y V L+ V G + LG FVA++ +VY+G
Sbjct: 2 AYFVLLLGMGFVLGGLAVASNPSPYYGVIGLVLGSVVGCGWLVSLGVPFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G+ + +L ++V + +
Sbjct: 62 GMLVVFVYSVCLAADPFPEAWGDWRVLGYGAGMVLVLVVGMVVGGVEYWKAGVVTVDNGG 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+F + + Y+ A +G+ LLL++ + L+
Sbjct: 122 IFVDRLDFSGVAMFYSWGAGMFLAAGWGLLLTLFVVLELVR 162
>gi|213136065|gb|ACJ43620.1| NADH dehydrogenase subunit 6 [Echinotriton andersoni]
Length = 172
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 64/165 (38%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+L + ++ V + +P ++ F LI A V L + LG F++++ +VY+G ++V
Sbjct: 6 FLSMVVMLVGLVAVASNPSPYFAAFGLILASVGGCCLLVDLGVSFLSLVLFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + + A ++ L A +++ ++ +
Sbjct: 66 VFAYSASLAAEPYPEAWGSWSVMGYVCVYVAFLVAGVMLFNCSYSIMYLFSCCCVNFRMV 125
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
V+Y+ L + G+ LLL++ + + R R
Sbjct: 126 GLDWGGVGVMYSFGGLVLVVVGWALLLTLFVVLEVTRGVSRGALR 170
>gi|298207535|ref|YP_003715714.1| peptidase, M20/M25/M40 family protein [Croceibacter atlanticus
HTCC2559]
gi|83850171|gb|EAP88039.1| peptidase, M20/M25/M40 family protein [Croceibacter atlanticus
HTCC2559]
Length = 783
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
FF + F+ ++S +L + R P L+ A +N GL +++ A + + + + +
Sbjct: 454 FFIIPVFLGLLSFWLCIRQRKP----MPLLLALIN--GLSIIILAPLIQFFPVGLGLKML 507
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVF 126
+V LF +++ + + V K++ GS F+ + A I N + + + LV+
Sbjct: 508 MVSSLFTVLLFGLLLPVFGFYKRKYIFGSVFLLLSAVFFIKAHLNAQFSEEQPKPNSLVY 567
Query: 127 KGNN 130
N
Sbjct: 568 SFNQ 571
>gi|170583485|ref|XP_001896601.1| Patched family protein [Brugia malayi]
gi|158596125|gb|EDP34524.1| Patched family protein [Brugia malayi]
Length = 797
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 32/192 (16%), Positives = 70/192 (36%), Gaps = 21/192 (10%)
Query: 3 MQSLFFYLFSFMAII-SSFLVVTVRNPIYS--------VFSLIFAFVNAAGLFLLLGAEF 53
+Q+L F SF+A++ + + ++PI S VF I + V + GL F
Sbjct: 166 LQALPFITVSFVAVLLFTVITSLKKDPITSKPWEAAFGVFCPILSLVASFGLLFWCNFPF 225
Query: 54 VAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFM 113
+ ++ ++ ++ + + + + L + +G + I +NF+
Sbjct: 226 LPIVCVIPFLV-LAIGVDDVFIFLHCYHQTDPRLPVEERIGKMLAEAGPSITITSLTNFL 284
Query: 114 VFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFIL----------LLSMIGAIVL 163
F+ + + I + Y Y + + IL L + I + +
Sbjct: 285 SFAISIFTPTPAIQIFSA-YISVAVVFDYTYQIFLYSAILTFGAHREKKRLHAFIPCMSI 343
Query: 164 MLRHRRDIKRQD 175
+R +K Q
Sbjct: 344 AETEKRSVKTQS 355
>gi|283479194|emb|CAY75110.1| gcd [Erwinia pyrifoliae DSM 12163]
Length = 799
Score = 34.6 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 67/178 (37%), Gaps = 20/178 (11%)
Query: 27 NPIYS-----VFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
+ ++S + L F +GL+LL+G ++A + +Y V L +L
Sbjct: 5 HTMHSKASRILILLTVIFAAMSGLYLLIGGIWLAKLGGSLYYIIAGVVLLITAFLLHR-- 62
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ 141
F +G L S+F + +++ + + I + L T+
Sbjct: 63 ---RRGAALLLYALFLLGTTVWSLWEVGSDFWALTPRLDVTFFLGLWLALPFIWRELNTK 119
Query: 142 YAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDNSIVMVKVKSGKGI 199
A+P +L+ ++ VL D Q+I+ L S+ + V + +G+
Sbjct: 120 GAFPRVALSAVLVFAVA---VLAYSVFNDP--QEINGTLNSDRAAA-----VPAEEGV 167
>gi|37596539|gb|AAQ95030.1| NADH dehydrogenase subunit 6 [Stagonopleura guttata]
Length = 159
Score = 34.6 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|314936828|ref|ZP_07844175.1| Na+/H+ antiporter, MnhA component [Staphylococcus hominis subsp.
hominis C80]
gi|313655447|gb|EFS19192.1| Na+/H+ antiporter, MnhA component [Staphylococcus hominis subsp.
hominis C80]
Length = 800
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 17 ISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMM 76
IS+FLVVT + ++S+ L + LF+ A +A+ VV + +F L +
Sbjct: 634 ISAFLVVTATSRLFSIIMLSVVGYAVSVLFVFFKAPDLALTQFVVESISTGLFLLCFYHL 693
Query: 77 LDIDIEVAEPRKK-RGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
+++ + K + S +G+ L + A FS+ GE
Sbjct: 694 PNLNRYNEKTSFKLTNAIISIGVGLAVTMLGLIAYGNRHFSSIGEY 739
>gi|254409466|ref|ZP_05023247.1| dolichyl-phosphate-mannose-protein mannosyltransferase [Microcoleus
chthonoplastes PCC 7420]
gi|196183463|gb|EDX78446.1| dolichyl-phosphate-mannose-protein mannosyltransferase [Microcoleus
chthonoplastes PCC 7420]
Length = 963
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 53/148 (35%), Gaps = 6/148 (4%)
Query: 35 LIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLG 94
LI + + L+ ++ + + +V +F + +++ R + +G
Sbjct: 216 LIGSRSLQSLLWAIIFGLSLGLALMVKQTALFFLFIPIVWVIVGTIRRRYWGRLVQLIVG 275
Query: 95 SFFIGILAAELIV--CASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFI 152
G++ A S + + + LY P +S +
Sbjct: 276 LLVSGLVFAPWYRTNWLLILTSGKRATLDSAIAEGDPALNTLEAWLYYGKILPFLVSWVL 335
Query: 153 LLLSMIGAIVLMLRHRRDI---KRQDIS 177
LL+ ++G ++L R + + +R+D+
Sbjct: 336 LLVPIVG-LILYWRKKERVWGREREDVF 362
>gi|164449790|ref|YP_001648844.1| NADH dehydrogenase subunit 6 [Sylvia crassirostris]
gi|164414720|emb|CAP10146.1| NADH dehydrogenase subunit 6 [Sylvia crassirostris]
Length = 172
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 60/149 (40%), Gaps = 3/149 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F S ++ + V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMKFVLF--LSLFFVLGGWAVASNPSPYYGVVGLVVASVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
Y+G ++V F++ + + D F +G++ + + G +
Sbjct: 59 YLGGMLVVFVYSVSLA-ADPYPEGWSDWGVVGYGFGMGLVIVIGAILGEVYGFLVDAGTV 117
Query: 122 SRLVFKGNNVENIGKVLYTQYAYPLEISG 150
+ G ++ + L + G
Sbjct: 118 DNGGLSMVRSDFSGVAMFYSWGAGLLMVG 146
>gi|110747873|gb|ABG89466.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747881|gb|ABG89472.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747885|gb|ABG89475.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747889|gb|ABG89478.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747897|gb|ABG89484.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747909|gb|ABG89493.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747965|gb|ABG89535.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747973|gb|ABG89541.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747985|gb|ABG89550.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747989|gb|ABG89553.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110747993|gb|ABG89556.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748021|gb|ABG89577.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748045|gb|ABG89595.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748053|gb|ABG89601.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748065|gb|ABG89610.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748093|gb|ABG89631.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748097|gb|ABG89634.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748101|gb|ABG89637.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748153|gb|ABG89676.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748173|gb|ABG89691.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
gi|110748201|gb|ABG89712.1| NADH dehydrogenase subunit 6 [Loxodonta africana]
Length = 175
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 66/169 (39%), Gaps = 10/169 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S ++ + +P+Y SL+ + G+ + G F+ ++ +VY+G ++V
Sbjct: 6 FIMSVFYVVGFIGFSSKPSPVYGGMSLVVSGGLGCGIVMSSGGSFLGLVVFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSAEGELSRL 124
F + M + ++ +++ + + F G +
Sbjct: 66 VFGYTTAMATEEYPETWGSNVVVLSAFLVGLLMEIFMVMWLFSGEHELVGFYFSGLEGLM 125
Query: 125 VFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V E + G LY+ + L ++G++L +S+ AI + +
Sbjct: 126 VLGEGGFEYVREDYSGGASLYSYGFWFLAMAGWMLFVSIFIAIEVTRKR 174
>gi|5081425|gb|AAD39375.1|AF123895_1 NADH dehydrogenase subunit 6 [Balearica pavonina]
Length = 173
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 66/167 (39%), Gaps = 5/167 (2%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 7 FMGLCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGISFVSLVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + E +G IL + + F+ G ++
Sbjct: 67 FVYSVSL--AADPYPEAWGDWRVMGYAVGFILVLGMGLVVGGFVEHWNFGVVTVDSGGMF 124
Query: 130 NVENIGK---VLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+V + Y++ ++G+ LLL++ + L+ R R
Sbjct: 125 SVRLDFSGVAMFYSRGGGLFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|208433855|ref|YP_002265560.1| NADH dehydrogenase subunit 6 [Cantherhines pardalis]
gi|207367043|dbj|BAG72019.1| NADH dehydrogenase subunit 6 [Cantherhines pardalis]
Length = 173
Score = 34.6 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 53/142 (37%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
LF F ++ V + +P ++ L+ G+ L G F++++ ++Y+G ++V
Sbjct: 7 LFLFGLVMGLLAVASNPSPYFAALGLVVTAGLGCGVLLGHGGSFLSLVLFLIYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F + + + +++ ++ + + + + +S VF
Sbjct: 67 FAYSAALAAEPYPESWGSGPVVMALLWYLLMVGMGVALFQAGWYEYSWAPADESGVFAMG 126
Query: 130 NVENIGKVLYTQYAYPLEISGF 151
+ G L PL +
Sbjct: 127 RGDMSGVALMFTSGGPLLMISA 148
>gi|161561751|ref|YP_001586147.1| NADH dehydrogenase subunit 6 [Rhynochetos jubatus]
gi|143024744|gb|ABO93095.1| NADH dehydrogenase subunit 6 [Rhynochetos jubatus]
Length = 172
Score = 34.6 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 67/164 (40%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ + V + +P Y V L+ A + G L LG FV+++ +VY+G ++V
Sbjct: 7 FLGGWFVLGALAVASNPSPYYGVVGLVVASIAGCGWLLSLGVSFVSLVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + A G+ +G++ ++ + F +F
Sbjct: 67 FVYSVSLAAEPFPEAWGDWGVIGYGAGLVGVIVVGVVAWGVADVGFGVVTVDGGGLFSVR 126
Query: 130 NVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+ + Y+ A ++G+ LLL++ + L+ R R
Sbjct: 127 LDFSGVSMFYSHGAGMFLVAGWGLLLTLFVVLELVRGLSRGTIR 170
>gi|30314637|dbj|BAC76076.1| NADH dehydrogenase 6 [Cervus nippon yesoensis]
Length = 175
Score = 34.6 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 63/174 (36%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIIFVLGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWVSNKTVLGAFVTGLLMEVMMVYYVLKDEEVEIVFQF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ A+ + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGAWLVIVTGWSLLIGVVVIMEITR 173
>gi|328554804|gb|AEB25296.1| monovalent cation/H+ antiporter subunit A [Bacillus
amyloliquefaciens TA208]
gi|328913163|gb|AEB64759.1| Na+/H+ antiporter [Bacillus amyloliquefaciens LL3]
Length = 800
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ S + + ++ V ++ + ++ SL A F++ A +A+ LV+ +V +
Sbjct: 631 IVLSLVMVSATAATVFAKSRLTAIISLGVVGYTLALFFVIFRAPDLALTQLVIETISVAL 690
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F L + ++ +K R F + FI L +IV S + + S F
Sbjct: 691 FLLCFYHL----PKMRRKKKTRTFRMTNFIISLGVGVIVTMLGIASSSEKTKDSIASFFT 746
Query: 129 NNVENIG 135
+G
Sbjct: 747 AYSHKLG 753
>gi|300711487|ref|YP_003737301.1| Oligosaccharyl transferase STT3 subunit [Halalkalicoccus jeotgali
B3]
gi|299125170|gb|ADJ15509.1| Oligosaccharyl transferase STT3 subunit [Halalkalicoccus jeotgali
B3]
Length = 889
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 23/175 (13%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIY--------SVFSLIFAFVNAAGLFLLLGAEFVAMIT 58
F + A++++ V P+Y + A+ AG+ L L
Sbjct: 183 LFMAIAVFAMMAALRVAERERPVYEQFVDRDLAGLKRPLAYGVLAGVALALYVWTWPPGV 242
Query: 59 LVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
++ + +F +F + L +D F+G+ + + + +
Sbjct: 243 IL-----IGIFGVFFAISLSVDYWRGVSPDHAAFVGALALAVAGVLTAAVIDQWSASATT 297
Query: 119 GELSRLVFKGNN------VENIGKVL----YTQYAYPLEISGFILLLSMIGAIVL 163
+ V + + + + + YPL + G I LL+ I A+VL
Sbjct: 298 FGYLQPVLAFGVAAGCLFMAWLARFWDARGFPRAGYPLAVLGLIALLTAITALVL 352
>gi|37596527|gb|AAQ95024.1| NADH dehydrogenase subunit 6 [Amandava amandava]
Length = 159
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG F++++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFMSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|37596559|gb|AAQ95040.1| NADH dehydrogenase subunit 6 [Lonchura castaneothorax]
Length = 158
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|37596429|gb|AAQ94975.1| NADH dehydrogenase subunit 6 [Lagonosticta senegala rendalli]
Length = 159
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|28972924|gb|AAM95262.1| NADH dehydrogenase subunit 6 [Plexaurella dichotoma]
Length = 120
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 17/125 (13%)
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
+IM++ +V + L L+ + ++ + ++
Sbjct: 1 LXXLVIMLIQQPNKVETQDHSHFLPVGLSVIFLFYSLLTNSPTYVS-------NPVIGSR 53
Query: 129 NNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIK----------RQDISK 178
N+ IG LYT Y + ++ +LL++MIGAI+L + +QD+ +
Sbjct: 54 TNIGAIGSHLYTTYYELVLVASLVLLVAMIGAILLAKQPNSPSLYNSYGDSLRSKQDLFQ 113
Query: 179 QLESN 183
Q+
Sbjct: 114 QISRE 118
>gi|313126880|ref|YP_004037150.1| hypothetical protein Hbor_21410 [Halogeometricum borinquense DSM
11551]
gi|312293245|gb|ADQ67705.1| hypothetical protein Hbor_21410 [Halogeometricum borinquense DSM
11551]
Length = 125
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 9/104 (8%)
Query: 84 AEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYT--- 140
R + G+ A L V V ++ E N +IG ++
Sbjct: 1 MTTRPRLKLGSHLVPGLAAVALFVVMVAAFVTASFPEPQGFGGDVNITASIGYAMFNLGF 60
Query: 141 ------QYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISK 178
+ EI +L+ +++GA++L R D Q ++
Sbjct: 61 GEVASESFLVAFEIIDIVLVAALVGAVMLARRETGDSAGQVLAD 104
>gi|163793077|ref|ZP_02187053.1| putative multicomponent Na+-H+ antiporter subunit A [alpha
proteobacterium BAL199]
gi|159181723|gb|EDP66235.1| putative multicomponent Na+-H+ antiporter subunit A [alpha
proteobacterium BAL199]
Length = 188
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 39/110 (35%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ L + + I++ ++T R+ + + +A L + L A VA V
Sbjct: 1 MELLINVVLLGLLGITAIAILTTRHLFVATMLAGGYSLTSAALLVNLDAVDVAFTEAAVG 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF 112
G V L + + +V + + FL G L V F
Sbjct: 61 AGISTVLMLGTLTLTRRREKVKKDFRWSPFLVVLATGALLVYGTVDMPAF 110
>gi|150388966|ref|YP_001319015.1| hypothetical protein Amet_1145 [Alkaliphilus metalliredigens
QYMF]
gi|149948828|gb|ABR47356.1| hypothetical protein Amet_1145 [Alkaliphilus metalliredigens
QYMF]
Length = 179
Score = 34.6 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 27/70 (38%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
Y+F + ++ + L V +V + + + +L A VA+ V+ +
Sbjct: 3 YVFYTLIVVFAILAVQTSQVRRAVIYVGIFALAISFCYLFYSAPDVAIAQAVITSTLGTI 62
Query: 69 FFLFIIMMLD 78
+L + +
Sbjct: 63 LYLIALQKKN 72
>gi|108793334|ref|YP_637164.1| NADH dehydrogenase subunit 6 [Pelobates cultripes]
gi|88683170|emb|CAI38769.1| NADH dehydrogenase subunit 6 [Pelobates cultripes]
Length = 169
Score = 34.6 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 41/100 (41%)
Query: 11 FSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFF 70
F + ++ V + +P ++ L+ + + GA F++++ +VY+G ++V F
Sbjct: 8 FFILMVLGLVAVASNPSPYFAALGLVMVSAAGCWVIISAGASFLSLVLFLVYLGGMMVVF 67
Query: 71 LFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
+ + A G+ ++G+L +
Sbjct: 68 AYSAALTAEPYPEAWGNWAVGWYILVYLGLLWLVSYLVGG 107
>gi|331675449|ref|ZP_08376199.1| protein YijP [Escherichia coli TA280]
gi|331067509|gb|EGI38914.1| protein YijP [Escherichia coli TA280]
Length = 577
Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A ++Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYIIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|284924056|emb|CBG37155.1| putative membrane protein [Escherichia coli 042]
Length = 577
Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A ++Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYIIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|260858073|ref|YP_003231964.1| hypothetical protein ECO26_5072 [Escherichia coli O26:H11 str.
11368]
gi|260870675|ref|YP_003237077.1| hypothetical protein ECO111_4780 [Escherichia coli O111:H- str.
11128]
gi|257756722|dbj|BAI28224.1| conserved predicted inner membrane protein [Escherichia coli
O26:H11 str. 11368]
gi|257767031|dbj|BAI38526.1| conserved predicted inner membrane protein [Escherichia coli
O111:H- str. 11128]
gi|320201551|gb|EFW76129.1| UPF0141 membrane protein YijP [Escherichia coli EC4100B]
gi|323155508|gb|EFZ41687.1| hypothetical protein ECEPECA14_2614 [Escherichia coli EPECa14]
gi|323177980|gb|EFZ63564.1| hypothetical protein ECOK1180_3576 [Escherichia coli 1180]
Length = 577
Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLHPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|16797942|gb|AAL29223.1| NADH dehydrogenase subunit 6 [Numenius phaeopus]
Length = 173
Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 68/170 (40%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLLLGVCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGISFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G+ F+ +L ++V +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGASFMLVLVVGMVVGGLVECWNFGVITVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|319442856|ref|ZP_07992012.1| histidine kinase [Corynebacterium variabile DSM 44702]
Length = 427
Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 59/186 (31%), Gaps = 4/186 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLV-VTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
V+QS F F + + + V +P+ +V + V GL + + +
Sbjct: 34 VIQSALFLFFGGIDLAGAVNTRVEDTDPVSAVILSVGYLVVFVGLLVQRRRPEAGLTVVA 93
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
V + V + ++ + + A + A + A
Sbjct: 94 VGLVVAAVALSEVYILAAGIVGYEAWFIAGYIRRRRRAWLGALLVGALAGATLAVLAPYV 153
Query: 121 LSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQL 180
V + E G+ + +S ILL+ ++ ++ L + ++RQ +
Sbjct: 154 ELSWVADLSREELYGESASLR-ELLFVLS--ILLVLIVVSVALCWQLGLGVRRQHQQMEN 210
Query: 181 ESNPDN 186
+
Sbjct: 211 LAARAE 216
>gi|157157305|ref|YP_001465452.1| hypothetical protein EcE24377A_4494 [Escherichia coli E24377A]
gi|191169549|ref|ZP_03031276.1| putative sulfatase [Escherichia coli B7A]
gi|256021658|ref|ZP_05435523.1| hypothetical protein ShiD9_22239 [Shigella sp. D9]
gi|293472273|ref|ZP_06664683.1| hypothetical protein ECCG_04518 [Escherichia coli B088]
gi|300824345|ref|ZP_07104460.1| arylsulfatase [Escherichia coli MS 119-7]
gi|307314717|ref|ZP_07594314.1| sulfatase [Escherichia coli W]
gi|309797153|ref|ZP_07691550.1| arylsulfatase [Escherichia coli MS 145-7]
gi|331670810|ref|ZP_08371646.1| protein YijP [Escherichia coli TA271]
gi|331680076|ref|ZP_08380738.1| protein YijP [Escherichia coli H591]
gi|157079335|gb|ABV19043.1| putative sulfatase [Escherichia coli E24377A]
gi|190900412|gb|EDV60234.1| putative sulfatase [Escherichia coli B7A]
gi|291321367|gb|EFE60807.1| hypothetical protein ECCG_04518 [Escherichia coli B088]
gi|300523151|gb|EFK44220.1| arylsulfatase [Escherichia coli MS 119-7]
gi|306905772|gb|EFN36298.1| sulfatase [Escherichia coli W]
gi|308119232|gb|EFO56494.1| arylsulfatase [Escherichia coli MS 145-7]
gi|315063290|gb|ADT77617.1| conserved inner membrane protein [Escherichia coli W]
gi|323380647|gb|ADX52915.1| sulfatase [Escherichia coli KO11]
gi|323943628|gb|EGB39735.1| sulfatase [Escherichia coli H120]
gi|331062065|gb|EGI33988.1| protein YijP [Escherichia coli TA271]
gi|331072402|gb|EGI43735.1| protein YijP [Escherichia coli H591]
Length = 577
Score = 34.6 bits (78), Expect = 8.3, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 52/163 (31%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A V+Y LF++ + + + A ++
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAMAVLL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQYAYPLE 147
+ S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYIVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|296099596|gb|ADG95203.1| NADH dehydrogenase subunit 6 [Polypterus endlicherii congicus]
Length = 167
Score = 34.6 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 48/110 (43%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ +FS +IS V + +P ++ F L+ G+ + G F++MI ++Y+G
Sbjct: 2 VLMVVFSMFFLISLIAVASNPSPYFAAFGLMIGAGAGCGMLVQCGMTFLSMILFLIYLGG 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
++V F + + A + ++ ++ +V NF VF
Sbjct: 62 MLVVFAYSAALAAEPYPRAWGSWEVFSYVLGYVLLIMGMWVVFVGNFEVF 111
>gi|308174850|ref|YP_003921555.1| Na+/H+ antiporter [Bacillus amyloliquefaciens DSM 7]
gi|307607714|emb|CBI44085.1| Na+/H+ antiporter [Bacillus amyloliquefaciens DSM 7]
Length = 800
Score = 34.6 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ S + + ++ V ++ + ++ SL A F++ A +A+ LV+ +V +
Sbjct: 631 IVLSLVMVSATAATVFAKSRLTAIISLGVVGYTLALFFVIFRAPDLALTQLVIETISVAL 690
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F L + ++ +K R F + FI L +IV S + + S F
Sbjct: 691 FLLCFYHL----PKMRRKKKTRTFRMTNFIISLGVGVIVTMLGIASSSEKTKDSIASFFT 746
Query: 129 NNVENIG 135
+G
Sbjct: 747 AYSHKLG 753
>gi|294494689|ref|YP_448957.2| NADH dehydrogenase subunit 6 [Cervus elaphus]
gi|266265871|dbj|BAE66711.2| NADH dehydrogenase subunit 6 [Cervus elaphus]
Length = 175
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIIFVVGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWVSNKTVLGAFVTGLLMEIVMVYYVLKDEEVEIVFQF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|157367480|gb|ABV45612.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
gi|157367494|gb|ABV45625.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
Length = 175
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 10/169 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + ++ + +P+Y SLI + G+ + G F+ ++ +VY+G ++V
Sbjct: 6 FIMSVLYVVGFIGFSSKPSPVYGGMSLIVSGGLGCGIIMSSGGSFLGLVVFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSAEGELSRL 124
F + I M + ++ +IV + + F G +
Sbjct: 66 VFGYTIAMATEEYPETWGSNVVVLSAFLVGLLMEIFMIVWLFSGEHELVGFYFGGLEGLV 125
Query: 125 VFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V + + G LY+ + L ++G++L +S+ AI + +
Sbjct: 126 VLGEGSFGYVREDYSGGASLYSYGFWFLAMAGWMLFVSIFIAIEVTRKR 174
>gi|62736205|ref|YP_227593.1| NADH dehydrogenase subunit 6 [Cervus nippon yesoensis]
gi|63025138|ref|YP_232844.1| NADH dehydrogenase subunit 6 [Cervus nippon centralis]
gi|116014308|ref|YP_788154.1| NADH dehydrogenase subunit 6 [Cervus nippon taiouanus]
gi|288903462|ref|YP_003434180.1| NADH dehydrogenase subunit 6 [Cervus nippon hortulorum]
gi|288903490|ref|YP_003434206.1| NADH dehydrogenase subunit 6 [Cervus elaphus xanthopygus]
gi|312233477|ref|YP_004021876.1| NADH dehydrogenase subunit 6 [Cervus elaphus songaricus]
gi|62241305|dbj|BAD93681.1| NADH dehydrogenase subunit 6 [Cervus nippon yesoensis]
gi|62751082|dbj|BAD95773.1| NADH dehydrogenase subunit6 [Cervus nippon centralis]
gi|115531532|gb|ABJ09691.1| NADH dehydrogenase subunit 6 [Cervus nippon taiouanus]
gi|117649980|gb|ABK54036.1| NADH dehydrogenase subunit 6 [Cervus nippon taiouanus]
gi|285013428|gb|ADC32707.1| NADH dehydrogenase subunit 6 [Cervus nippon hortulorum]
gi|285013442|gb|ADC32720.1| NADH dehydrogenase subunit 6 [Cervus elaphus xanthopygus]
gi|309399278|gb|ADO78912.1| NADH dehydrogenase subunit 6 [Cervus nippon hortulorum]
gi|309399292|gb|ADO78925.1| NADH dehydrogenase subunit 6 [Cervus elaphus songaricus]
Length = 175
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIIFVLGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWVSNKTVLGAFVTGLLMEVMMVYYVLKDEEVEIVFQF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|260782703|ref|XP_002586423.1| hypothetical protein BRAFLDRAFT_107702 [Branchiostoma floridae]
gi|229271531|gb|EEN42434.1| hypothetical protein BRAFLDRAFT_107702 [Branchiostoma floridae]
Length = 1765
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 68/194 (35%), Gaps = 25/194 (12%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVT-------VRNPIY---SVFSLIFAFVNAAGLFLLLGA 51
+ F L + II++ +V+ +R PIY + ++ F L+ +G
Sbjct: 1076 TGTDIVFSLIGLIEIIANAVVILGIIGTKELRKPIYFFLANLAMADVFAGIGLLYRTVGH 1135
Query: 52 EFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAA-----ELI 106
V + + + F +F M + + G + I A ++
Sbjct: 1136 --VGHNQMYDFSVTYLNFLIFSQMTSASALSLLSINSYVGVRHPIYFHIHANSAKLRAVV 1193
Query: 107 VCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYA---YPLEISGFILLLSMI----- 158
++++FS + + ++E + T Y Y + + L+ M+
Sbjct: 1194 AMIVSWIIFSLIAFSPSMGWNCLHMETLTTGTCTYYFPQAYIIMCLSIMFLMCMVMLFTN 1253
Query: 159 GAIVLMLRHRRDIK 172
++ + +R R +
Sbjct: 1254 ISVYVAIRDREKRR 1267
>gi|71658035|ref|YP_271975.1| NADH dehydrogenase subunit 6 [Alectura lathami]
gi|38048816|gb|AAR10289.1| NADH dehydrogenase subunit 6 [Alectura lathami]
Length = 173
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ S V + +P Y V L+ V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLFLGVSFMLGSLAVASNPSPYYGVVGLVLGSVAGCGWLLSLGGSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ ++ +
Sbjct: 62 GMLVVFVYSVALAADPFPGAWGDWRVVGYGVGFVLVVFVGVVWGGFVDFWGVEVNTVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ Y ++G+ LLL++ + L+ R R
Sbjct: 122 GSTLMRLDFSGVAVFYSYGVGLFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|157367466|gb|ABV45599.1| NADH dehydrogenase subunit 6 [Mammuthus primigenius]
Length = 175
Score = 34.6 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 68/169 (40%), Gaps = 10/169 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + ++ + +P+Y SLI + G+ + G F+ ++ +VY+G ++V
Sbjct: 6 FIMSVLYVVGFIGFSSKPSPVYGGMSLIVSGGLGCGIIMSSGGSFLGLVVFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASN----FMVFSAEGELSRL 124
F + I M + ++ +IV + + F G +
Sbjct: 66 VFGYTIAMATEEYPETWGSNVVVLSAFLVGLLMEIFMIVWLFSGEHELVGFYFGGLEGLV 125
Query: 125 VFKGNNVENI------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
V + + G LY+ + L ++G++L +S+ AI + +
Sbjct: 126 VLGEGSFGYVREDYSGGASLYSYGFWFLAMAGWMLFVSIFIAIEVTRKR 174
>gi|115532038|ref|YP_783968.1| NADH dehydrogenase subunit 6 [Lagostrophus fasciatus]
gi|115345135|emb|CAK22241.1| NADH dehydrogenase subunit 6 [Lagostrophus fasciatus]
Length = 167
Score = 34.6 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 63/167 (37%), Gaps = 1/167 (0%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + +LFS + I + +P+Y SL+ + + + L F+ +I +VY
Sbjct: 1 MKMMVIFLFSVLLIFGFVAFASKPSPVYGGLSLVASGGLGCAIVVSLEDVFLGLIVFLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+G ++V F + M + + F ++ + + + V
Sbjct: 61 LGGMLVVFGYTAAMATEEYPESWVGNTVALSMLLFTLLIESVWYLLSGQVKVSMTVELFD 120
Query: 123 RLVFKGNNVENIGKVLYTQY-AYPLEISGFILLLSMIGAIVLMLRHR 168
+ + G L + L + G+IL +++ + ++ H
Sbjct: 121 TVGDYCVGRDYSGVSLLYGCGGWALVLLGWILFITIYVVLEVVRGHN 167
>gi|37886710|gb|AAR04680.1| NADH dehydrogenase subunit 6 [Coragyps atratus]
Length = 170
Score = 34.6 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 69/169 (40%), Gaps = 2/169 (1%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLFLGVCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A ++ +G IL + V + S
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDRRV--VGYGVGLILVLAVGVGGMGGWEWGVVTVDSGG 119
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
+F + + Y++ A ++G+ LLL++ + L+ R R
Sbjct: 120 LFSVRLDFSGVAMFYSRGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 168
>gi|1171843|sp|P43200|NU6M_FRAAR RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394674|emb|CAA52134.1| NADH dehydrogenase subunit 6 [Fratercula arctica]
Length = 173
Score = 34.6 bits (78), Expect = 8.7, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + S ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVFFLSLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+G+L L+V + +
Sbjct: 62 GMLVVFVYSVALAADPFPEAWGDWRVVGYGVGFVGVLVMGLVVGGFIGCLNFGVITVDST 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G + Y++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMLSVRLDFSGVAMFYSRGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|228474358|ref|ZP_04059093.1| Na(+)/H(+) antiporter subunit A [Staphylococcus hominis SK119]
gi|228271717|gb|EEK13064.1| Na(+)/H(+) antiporter subunit A [Staphylococcus hominis SK119]
Length = 800
Score = 34.2 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 17 ISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMM 76
IS+FLVVT + ++S+ L + LF+ A +A+ VV + +F L +
Sbjct: 634 ISAFLVVTATSRLFSIIMLSVVGYAVSVLFVFFKAPDLALTQFVVESISTGLFLLCFYHL 693
Query: 77 LDIDIEVAEPRKK-RGFLGSFFIGILAAELIVCASNFMVFSAEGEL 121
+++ + K + S +G+ L + A FS+ GE
Sbjct: 694 PNLNRYNEKTSFKLTNAIISIGVGLAVTMLGLIAYGNRHFSSIGEY 739
>gi|183982355|ref|YP_001850646.1| MmpL family transport protein [Mycobacterium marinum M]
gi|183175681|gb|ACC40791.1| conserved transmembrane transport protein, MmpL family
[Mycobacterium marinum M]
Length = 1457
Score = 34.2 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 53/150 (35%), Gaps = 12/150 (8%)
Query: 4 QSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLI----FAFVNAAGL-----FLLLGAEFV 54
+ F +F+ + I+ LV+ +R + + LI +F++A GL L+LG +
Sbjct: 837 HDIQFIVFATILIVFLILVILLRAIV-APLYLIGSVLVSFLSALGLGVIVFQLILGKDLH 895
Query: 55 AMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
+ + ++ V V + ++++ + + + G +G + F
Sbjct: 896 WSLPGLSFILLVAVGADYNMLLISRIRDESPHGVRVG--VIRTVGSTGGVITSAGLIFAA 953
Query: 115 FSAEGELSRLVFKGNNVENIGKVLYTQYAY 144
+ + IG +
Sbjct: 954 SMFGLLAASITTMVEAGFIIGSGILIDTFL 983
>gi|312233449|ref|YP_004021850.1| NADH dehydrogenase subunit 6 [Cervus eldi]
gi|308277999|gb|ADO27635.1| NADH dehydrogenase subunit 6 [Cervus eldi]
Length = 175
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSILFVLGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWVSNKTVLGAFVTGLLMEVMMVFYVLKDEEVEIVFQF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|296099680|gb|ADG95281.1| NADH dehydrogenase subunit 6 [Polypterus palmas buettikoferi]
Length = 167
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 53/129 (41%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
L +FS + +IS V + +P ++ F L+ G+ + G F++MI ++Y+G
Sbjct: 2 LLMVVFSIIFLISLIAVASNPSPYFAAFGLMVGAGAGCGMLMQCGVTFLSMILFLIYLGG 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLV 125
++V F + + A + ++ ++ +V +F +F V
Sbjct: 62 MLVVFAYSAALAAEPYPHAWGSWEVFSYVLGYMFLVIVLWVVFVGDFGLFDDIEGHFGAV 121
Query: 126 FKGNNVENI 134
+ V +
Sbjct: 122 RQYVGVAEV 130
>gi|298386689|ref|ZP_06996244.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_14]
gi|298260363|gb|EFI03232.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_14]
Length = 541
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 76 MLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIG 135
+ + E K ++ I AA+ + + + + + + +E
Sbjct: 292 IFNRGGSYGELYKLEKEEKNYPAAIAAADSFIYYLDSIYDTTKAAEITRLADQYEIEFYQ 351
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDN 186
+ + +Y E+ +LL + GAI L + RR K ++ QL + +
Sbjct: 352 QKIAGRYKI--EVLSLLLLFIIGGAISLWIDKRRKKKYLELQNQLMKSRTD 400
>gi|269956631|ref|YP_003326420.1| hypothetical protein Xcel_1842 [Xylanimonas cellulosilytica DSM
15894]
gi|269305312|gb|ACZ30862.1| hypothetical protein Xcel_1842 [Xylanimonas cellulosilytica DSM
15894]
Length = 304
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 57/174 (32%), Gaps = 9/174 (5%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M + + F I+ + V +++ + + A+ +LL A VA+ V
Sbjct: 1 MGIDQIVFVF----MIVFAVRAVFASCLKHAIITSGVFGLWASLAYLLYHAPDVAVSEAV 56
Query: 61 VYVGAVIVFFLFII-----MMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
V V + I + + + RK L G++ A
Sbjct: 57 VASSLGTVLLILTIRSYDDVTVPGIPRMIWHRKGVDLLMLGTCGLVLWLTAQAAPVAATP 116
Query: 116 SAEGELSRLVFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRR 169
E + R + V + +L + +LL++++G + L R
Sbjct: 117 VHEEVMRRFLEGSRAVNPVTSILLHHRVLDTVLEALMLLVAVLGVMHLTRSDGR 170
>gi|260833590|ref|XP_002611740.1| hypothetical protein BRAFLDRAFT_98689 [Branchiostoma floridae]
gi|229297111|gb|EEN67750.1| hypothetical protein BRAFLDRAFT_98689 [Branchiostoma floridae]
Length = 805
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 54/174 (31%), Gaps = 21/174 (12%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSV-------------FSLIFAFVNAAGLFLLLGAEFVA 55
YL + +S+ V IYS+ L+ + V+AA LF++ GA +
Sbjct: 536 YLTLALICLSAISAVIY--TIYSLGNKRLRPLDGKLKLQLVLSLVSAAVLFVV-GAILLP 592
Query: 56 MITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGS----FFIGILAAELIVCASN 111
+ + A L + L + + + + +
Sbjct: 593 GPLCIFFAIATHHLLLVAFSTMSAMAFDLYLHFSDSPLAANKKPWCFFLYSWGVPTVVVG 652
Query: 112 FMVFSAEGELSRLVFKGNNVE-NIGKVLYTQYAYPLEISGFILLLSMIGAIVLM 164
F S + IG + + A+ + ++ ++ + A +L
Sbjct: 653 VTAFMDFCSCSSIEVGYGQAHCWIGNPVASICAFGVPVALVLVTNACFAARMLC 706
>gi|156142592|gb|ABU52061.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142594|gb|ABU52062.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
gi|156142596|gb|ABU52063.1| NADH dehydrogenase subunit 6 [Coereba flaveola]
Length = 166
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 36/79 (45%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
++ V + +P Y V L+ A V G + LG F++++ ++VY+G ++V
Sbjct: 1 FLGLCFVLGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFISLVLVMVYLGGMLVV 60
Query: 70 FLFIIMMLDIDIEVAEPRK 88
F++ + + A
Sbjct: 61 FVYSVSLAAEPYPEAWGNF 79
>gi|28867229|ref|NP_789859.1| NADH dehydrogenase subunit 6 [Muntiacus crinifrons]
gi|28569629|gb|AAO43649.1| NADH dehydrogenase subunit 6 [Muntiacus crinifrons]
Length = 175
Score = 34.2 bits (77), Expect = 8.9, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIIFVLGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWLSSKAVLGAFITGLLMEIAMVYYVLKDEEVEIVFQF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|322422839|ref|YP_004222623.1| NADH dehydrogenase subunit 6 [Heterocephalus glaber]
gi|316891383|gb|ADU57108.1| NADH dehydrogenase subunit 6 [Heterocephalus glaber]
Length = 176
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 42/121 (34%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M +Y S + +I +PIY SLI + + L G F+ ++ +V+
Sbjct: 1 MTLNVYYFLSILFVIGCVGFSVKPSPIYGGLSLIVSGALGCVIILGYGGSFLGLMVFLVF 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELS 122
+G ++V F + M + + F + L N+ + +
Sbjct: 61 LGGMMVVFGYTTAMSMEQYPESWVSNVAVWSVMLFSLFMEGLLSYVWLNYDYVEVIVQFN 120
Query: 123 R 123
Sbjct: 121 N 121
>gi|300926215|ref|ZP_07142020.1| arylsulfatase [Escherichia coli MS 182-1]
gi|301324927|ref|ZP_07218486.1| arylsulfatase [Escherichia coli MS 78-1]
gi|300417750|gb|EFK01061.1| arylsulfatase [Escherichia coli MS 182-1]
gi|300848178|gb|EFK75938.1| arylsulfatase [Escherichia coli MS 78-1]
Length = 577
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 52/163 (31%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVC 108
A +A V+Y LF++ + + + A ++
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAMAVLL 138
Query: 109 ASNFMVFSAEGEL----SRLVFKGNNVENIGKVLYTQYAYPLE 147
+ S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYIVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|253571123|ref|ZP_04848530.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_6]
gi|251839076|gb|EES67160.1| TPR-repeat-containing protein [Bacteroides sp. 1_1_6]
Length = 541
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 76 MLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIG 135
+ + E K ++ I AA+ + + + + + + +E
Sbjct: 292 IFNRGGSYGELYKLEKEEKNYPAAIAAADSFIYYLDSIYDTTKAAEITRLADQYEIEFYQ 351
Query: 136 KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKRQDISKQLESNPDN 186
+ + +Y E+ +LL + GAI L + RR K ++ QL + +
Sbjct: 352 QKIAGRYKI--EVLSLLLLFIIGGAISLWIDKRRKKKYLELQNQLMKSRTD 400
>gi|226225420|ref|YP_002759526.1| major facilitator superfamily protein [Gemmatimonas aurantiaca
T-27]
gi|226088611|dbj|BAH37056.1| major facilitator superfamily protein [Gemmatimonas aurantiaca
T-27]
Length = 458
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 38/128 (29%), Gaps = 3/128 (2%)
Query: 25 VRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDI---DI 81
+ P +VF LI F F++ G +A ++ + F +L +
Sbjct: 96 AKKPFLAVFMLIGVFSTLGMYFIMHGDLLLASTLFILAMAGATGSMTFYESLLPHIADER 155
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQ 141
E+ +G G+L A + +N + + + V
Sbjct: 156 EIDRVSTAAYAMGYVGGGVLLAINLAWITNPGLIGLPSGEGLTRAQATLPVRLAFVSVGI 215
Query: 142 YAYPLEIS 149
+ I
Sbjct: 216 WWLLFSIP 223
>gi|37596495|gb|AAQ95008.1| NADH dehydrogenase subunit 6 [Uraeginthus cyanocephalus]
Length = 159
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|37596499|gb|AAQ95010.1| NADH dehydrogenase subunit 6 [Uraeginthus bengalus]
Length = 159
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|1171844|sp|P43201|NU6M_FRACR RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|394676|emb|CAA52135.1| NADH dehydrogenase subunit 6 [Fratercula corniculata]
Length = 173
Score = 34.2 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 71/170 (41%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F + S ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVFFLSLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+G+L L+V + + +
Sbjct: 62 GMLVVFVYSVALAADPFPEAWGDWRVVGYGVGFVGVLVVGLVVGGFIECLNFGVVTVDSV 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|37596507|gb|AAQ95014.1| NADH dehydrogenase subunit 6 [Estrilda atricapilla]
Length = 159
Score = 34.2 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|110644295|ref|YP_672025.1| hypothetical protein ECP_4168 [Escherichia coli 536]
gi|117626224|ref|YP_859547.1| hypothetical protein APECO1_2512 [Escherichia coli APEC O1]
gi|161486035|ref|NP_756768.2| hypothetical protein c4914 [Escherichia coli CFT073]
gi|191172701|ref|ZP_03034239.1| putative sulfatase [Escherichia coli F11]
gi|218561026|ref|YP_002393939.1| hypothetical protein ECS88_4410 [Escherichia coli S88]
gi|218692241|ref|YP_002400453.1| hypothetical protein ECED1_4660 [Escherichia coli ED1a]
gi|227885298|ref|ZP_04003103.1| conserved inner membrane protein [Escherichia coli 83972]
gi|300975914|ref|ZP_07173221.1| arylsulfatase [Escherichia coli MS 45-1]
gi|300986771|ref|ZP_07177763.1| arylsulfatase [Escherichia coli MS 200-1]
gi|301048625|ref|ZP_07195638.1| arylsulfatase [Escherichia coli MS 185-1]
gi|306813778|ref|ZP_07447954.1| hypothetical protein ECNC101_00248 [Escherichia coli NC101]
gi|331649810|ref|ZP_08350890.1| protein YijP [Escherichia coli M605]
gi|331660515|ref|ZP_08361449.1| protein YijP [Escherichia coli TA206]
gi|259586168|sp|P0CB40|CPTA_ECOLX RecName: Full=Phosphoethanolamine transferase CptA
gi|4741821|gb|AAD28716.1|AF112861_1 membrane protein YijP [Escherichia coli RS218]
gi|110345887|gb|ABG72124.1| protein YijP [Escherichia coli 536]
gi|115515348|gb|ABJ03423.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|190907005|gb|EDV66606.1| putative sulfatase [Escherichia coli F11]
gi|218367795|emb|CAR05589.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
gi|218429805|emb|CAR10767.2| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|222035671|emb|CAP78416.1| UPF0141 membrane protein yijP [Escherichia coli LF82]
gi|227837674|gb|EEJ48140.1| conserved inner membrane protein [Escherichia coli 83972]
gi|281181026|dbj|BAI57356.1| conserved hypothetical protein [Escherichia coli SE15]
gi|294490741|gb|ADE89497.1| sulfatase family protein [Escherichia coli IHE3034]
gi|300299545|gb|EFJ55930.1| arylsulfatase [Escherichia coli MS 185-1]
gi|300306389|gb|EFJ60909.1| arylsulfatase [Escherichia coli MS 200-1]
gi|300410180|gb|EFJ93718.1| arylsulfatase [Escherichia coli MS 45-1]
gi|305852776|gb|EFM53223.1| hypothetical protein ECNC101_00248 [Escherichia coli NC101]
gi|307556103|gb|ADN48878.1| inner membrane protein [Escherichia coli ABU 83972]
gi|307629032|gb|ADN73336.1| hypothetical protein UM146_20030 [Escherichia coli UM146]
gi|312948534|gb|ADR29361.1| hypothetical protein NRG857_19760 [Escherichia coli O83:H1 str. NRG
857C]
gi|315289673|gb|EFU49066.1| arylsulfatase [Escherichia coli MS 110-3]
gi|315292682|gb|EFU52034.1| arylsulfatase [Escherichia coli MS 153-1]
gi|315298499|gb|EFU57754.1| arylsulfatase [Escherichia coli MS 16-3]
gi|323949449|gb|EGB45338.1| sulfatase [Escherichia coli H252]
gi|323954270|gb|EGB50055.1| sulfatase [Escherichia coli H263]
gi|324006702|gb|EGB75921.1| arylsulfatase [Escherichia coli MS 57-2]
gi|324012475|gb|EGB81694.1| arylsulfatase [Escherichia coli MS 60-1]
gi|330908278|gb|EGH36797.1| UPF0141 membrane protein YijP [Escherichia coli AA86]
gi|331041443|gb|EGI13593.1| protein YijP [Escherichia coli M605]
gi|331052464|gb|EGI24501.1| protein YijP [Escherichia coli TA206]
gi|332002398|gb|AED99288.1| membrane protein [Escherichia coli]
Length = 577
Score = 34.2 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|108793419|ref|YP_637009.1| NADH dehydrogenase subunit 6 [Nipponia nippon]
gi|84579397|dbj|BAE72088.1| NADH dehydrogenase subunit 6 [Nipponia nippon]
Length = 173
Score = 34.2 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 1/165 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
I+ V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 7 FLGVGFILGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + + G F+ +L +V +
Sbjct: 67 FVYSVALAADLFPETWGDWRVVGYGVGFVSVLWVGAVVGGLAEGWKLGVVTVDSGGVFSV 126
Query: 130 NVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G + Y + A ++G+ LLL++ A+ L+ R R
Sbjct: 127 RLDFSGVAMFYAEGAGMFLVAGWGLLLTLFVALELVRGLSRGAIR 171
>gi|56548773|ref|YP_161232.1| NADH dehydrogenase subunit 6 [Macrotis lagotis]
gi|56398544|emb|CAG26418.1| NADH dehydrogenase subunit 6 [Macrotis lagotis]
Length = 167
Score = 34.2 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 42/105 (40%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + +LFS + I + +P+Y SL+ + + + L F+ ++ +VY
Sbjct: 1 MKMMVLFLFSILLIFGFVAFASKPSPVYGGLSLVISGGVGCAIVVSLEDTFLGLVVFLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
+G ++V F + M + F+ ++ A
Sbjct: 61 LGGMLVVFGYTAAMATEEYPETWVGNVVALSMLCFVLLMEAIWYF 105
>gi|71658077|ref|YP_272084.1| NADH dehydrogenase subunit 6 [Gallus gallus bankiva]
gi|71040234|dbj|BAE16090.1| NADH dehydrogenase subunit 6 [Gallus gallus bankiva]
Length = 173
Score = 34.2 bits (77), Expect = 9.2, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 65/170 (38%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G + LG FV++ +VY+G
Sbjct: 2 TYFVIFLGICFMLGVLAVASNPSPYYGVVGLVVASVMGCGWLVSLGVSFVSLALFLVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ +++ +
Sbjct: 62 GMLVVFVYSVSLAADPYPEAWGNWRVVGYGLGFVLVVWMGVVLGGLVDFWKVGVVTVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 122 GVSFARLDFSGVAVFYSCGVGLFLVAGWGLLLALFVVLELVRGLSRGAIR 171
>gi|326535894|ref|YP_004300341.1| NADH dehydrogenase subunit 6 [Emberiza chrysophrys]
gi|325305644|gb|ADZ10809.1| NADH dehydrogenase subunit 6 [Emberiza chrysophrys]
Length = 172
Score = 34.2 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
LF + V + +P Y V L+ A V G + LG FV+++ ++VY+G
Sbjct: 3 LFVLFLGLCFVFGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVPFVSLVLVMVYLGG 62
Query: 66 VIVFFLFIIMM 76
++V F++ + +
Sbjct: 63 MLVVFVYSVSL 73
>gi|254822550|ref|ZP_05227551.1| hypothetical protein MintA_21654 [Mycobacterium intracellulare
ATCC 13950]
Length = 99
Score = 34.2 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M YL + + + LVV +R+ SV +L LF+++ A VA+ T+
Sbjct: 1 MTSLWAVDYLCLALVVGCAVLVVFLRSITGSVMALSAMGTVLGALFVVMAAPDVALATVA 60
Query: 61 VYVGAVIVFFLFII 74
V A V +L I
Sbjct: 61 VGAIAQPVLYLIAI 74
>gi|254039217|ref|ZP_04873267.1| yijP [Escherichia sp. 1_1_43]
gi|226838653|gb|EEH70682.1| yijP [Escherichia sp. 1_1_43]
Length = 577
Score = 34.2 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|215979579|ref|YP_002333087.1| NADH dehydrogenase subunit 6 [Chelonodon patoca]
gi|215422767|dbj|BAG85598.1| NADH dehydrogenase subunit 6 [Chelonodon patoca]
Length = 173
Score = 34.2 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 1/153 (0%)
Query: 22 VVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDI 81
V + +P + SL+ G+ + G F++++ ++Y+G ++V F + +
Sbjct: 19 VASNPSPYFGALSLVVVAAFGCGVLIWHGGAFLSLVLFLIYLGGMLVVFAYSAALAAEPY 78
Query: 82 EVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVENIG-KVLYT 140
++GI+ ++ ++ + + G LY+
Sbjct: 79 PETLGSWSVLVWMLTYLGIVVLVYVILLGWGDEYTWPIVDEAEPCLASRGDATGVAFLYS 138
Query: 141 QYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
L + G+ LLL++ + L R R
Sbjct: 139 HGGGMLMVGGWALLLTLFVVLELTRGSSRGALR 171
>gi|52548534|gb|AAU82383.1| F420H2-quinone oxidoreductase 16.5 kD subunit [uncultured
archaeon GZfos17C7]
Length = 160
Score = 34.2 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 36/71 (50%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M ++ L + A++SS V+ R+ Y+ + + A ++ L G + V ++ +
Sbjct: 1 MSIEMLLLSALACTAVLSSVAVLLTRDNFYASMFMSATMIMVATIYALFGIQPVFVLIVF 60
Query: 61 VYVGAVIVFFL 71
++VGA+ + +
Sbjct: 61 IFVGALGMITV 71
>gi|37596565|gb|AAQ95043.1| NADH dehydrogenase subunit 6 [Lemuresthes nana]
Length = 159
Score = 34.2 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGVCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|21908058|ref|NP_663803.1|ND6_16534 NADH dehydrogenase subunit 6 [Muntiacus reevesi]
gi|116235413|ref|YP_794160.1| NADH dehydrogenase subunit 6 [Muntiacus reevesi micrurus]
gi|21842402|gb|AAM77766.1|AF527537_13 NADH dehydrogenase subunit 6 [Muntiacus reevesi]
gi|116006455|gb|ABJ51761.1| NADH dehydrogenase subunit 6 [Muntiacus reevesi micrurus]
Length = 175
Score = 34.2 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIIFVLGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWLSSKAVLGAFITGLLMEVAMVYYVLKDEEVEIVFQF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|288903540|ref|YP_003434294.1| NADH dehydrogenase subunit 6 [Cervus elaphus yarkandensis]
gi|285013456|gb|ADC32733.1| NADH dehydrogenase subunit 6 [Cervus elaphus yarkandensis]
Length = 175
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIIFVLGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWVSNKTVLGAFVTGLLMEVVMVYYVLKDEEVEIVFQF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|219524214|ref|YP_002456357.1| NADH dehydrogenase subunit 6 [Hydropotes inermis]
gi|161824391|gb|ABX79766.1| NADH dehydrogenase subunit 6 [Hydropotes inermis]
Length = 175
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 66/174 (37%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIIFVLGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNF----MVFSA 117
Y+G ++V F + M K ++ ++ +VF
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEIWVSNKTVLGAFITGLLMEVVMVYYVMKDEEVEIVFQF 119
Query: 118 EGELSRLVFKGNNVENIGKV------LYTQYAYPLEISGFILLLSMIGAIVLML 165
G +++ + + LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGVGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|116734813|ref|YP_842411.1| NADH dehydrogenase subunit 6 [Pteroglossus azara flavirostris]
gi|109676670|gb|ABG37758.1| NADH dehydrogenase subunit 6 [Pteroglossus azara flavirostris]
Length = 173
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 66/162 (40%), Gaps = 1/162 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+FA V G + LG FV ++ +VY+G
Sbjct: 2 AYFLLFLGVCFVLGGLAVASNPSPYYGVMGLVFASVVGCGWLVSLGMSFVGLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G +L ++ + + G +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVLGYGMSMALLLVVGVVAGGVVESLGAGVGTVDGE 121
Query: 125 VFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
++ G + Y+Q L + G+ LLL++ + L+
Sbjct: 122 GVCFVRMDFSGVAMFYSQGVGALLVGGWSLLLTLFVVMELVR 163
>gi|37596463|gb|AAQ94992.1| NADH dehydrogenase subunit 6 [Estrilda troglodytes]
gi|37596465|gb|AAQ94993.1| NADH dehydrogenase subunit 6 [Estrilda melpoda]
gi|37596467|gb|AAQ94994.1| NADH dehydrogenase subunit 6 [Estrilda rhodopyga]
Length = 159
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|18138256|ref|NP_542467.1|ND6_15900 NADH dehydrogenase subunit 6 [Lepidosiren paradoxa]
gi|18001021|gb|AAL55255.1|AF302934_13 NADH dehydrogenase subunit 6 [Lepidosiren paradoxa]
Length = 169
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 42/108 (38%)
Query: 7 FFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAV 66
F + IIS V + +P+++ L+ G+ + LG F++++ ++Y+G +
Sbjct: 4 IFVMLLVGFIISLIGVASNPSPMFAALGLVCGAAFGCGILVWLGGSFLSLVLFLIYLGGM 63
Query: 67 IVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMV 114
+V F + + + + A G+ + V
Sbjct: 64 LVVFAYSVALSSEEYPEAWMDWPVMMNFIMLGGVTVWWWVFLEVGVDV 111
>gi|71402426|ref|XP_804128.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70866932|gb|EAN82277.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 898
Score = 34.2 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 47/143 (32%), Gaps = 4/143 (2%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFL-LLGAEFVAMITLVV 61
+ S+ F+ + + + ++ R P SV N G+ L L G + ++
Sbjct: 668 LSSVVFFFALTVFLRKTLGTISCRAPWRSVSY--TTMFNLDGIMLTLFGYFMLVLLATFA 725
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELI-VCASNFMVFSAEGE 120
+ + + + A P + + + + +++
Sbjct: 726 FALVYSRWHTREEIEAHVQEFQALPEFWTFRNTTKVVAVYVIGIGQALCLGYLMKLWIYR 785
Query: 121 LSRLVFKGNNVENIGKVLYTQYA 143
S +V+ +IG VLY +
Sbjct: 786 TSNVVWNWEASPSIGAVLYMTFL 808
>gi|296099568|gb|ADG95177.1| NADH dehydrogenase subunit 6 [Polypterus bichir bichir]
Length = 167
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 48/110 (43%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ +FS + + S V + +P ++ F L+ G+ + G F++MI ++Y+G
Sbjct: 2 VLMVVFSVIFLFSLIAVASNPSPYFAAFGLMVGAGAGCGMLMQCGMTFLSMILFLIYLGG 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
++V F + + A + ++ ++ +V +F VF
Sbjct: 62 MLVVFAYSAALAAEPYPRAWGSWEVFSYVLGYVLLIVGVWVVFVGDFEVF 111
>gi|295395946|ref|ZP_06806131.1| cytochrome c oxidase, subunit I [Brevibacterium mcbrellneri ATCC
49030]
gi|294971219|gb|EFG47109.1| cytochrome c oxidase, subunit I [Brevibacterium mcbrellneri ATCC
49030]
Length = 570
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 43/143 (30%), Gaps = 17/143 (11%)
Query: 7 FFYLFS----------FMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAM 56
F+ F F I+S V R PI+ L++A + A L + + A
Sbjct: 256 LFWFFGHPEVYVIALPFFGIVSEIFPVFSRKPIFGYKMLVYATITIAALSISVWAHH--- 312
Query: 57 ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFS 116
+YV ++ F M + I + F ++ + F
Sbjct: 313 ----MYVTGAVMLPFFAFMTMLIAVPTGVKIFNWIFTMFKGSLTFETPMLWSIGFLVSFV 368
Query: 117 AEGELSRLVFKGNNVENIGKVLY 139
G ++ + I +
Sbjct: 369 FGGLTGVILASPALDQQIADSYF 391
>gi|189095527|ref|YP_001936482.1| NADH dehydrogenase subunit 6 [Syrmaticus humiae]
gi|171702203|dbj|BAG16234.1| NADH dehydrogenase subunit 6 [Syrmaticus humiae]
Length = 173
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 53/146 (36%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G + LG FV++ +VY+G
Sbjct: 2 TYFVIFLGVCFMLGVLAVASNPSPYYGVVGLVLASVVGCGWLVSLGVSFVSLALFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ + + +
Sbjct: 62 GMLVVFVYSVSLAADPYPEAWGDWRVVGYGLGFVLVVCVGVFLVGFVDFWKFVVVTVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISG 150
++ G ++ Y L +
Sbjct: 122 GVSFVRLDFSGVAVFYSYGVGLFLVA 147
>gi|108793517|ref|YP_637113.1| NADH dehydrogenase subunit 6 [Podiceps cristatus]
gi|108755535|dbj|BAE95766.1| NADH dehydrogenase subunit 6 [Podiceps cristatus]
Length = 173
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 55/146 (37%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G L LGA FV+++ +VY+G
Sbjct: 2 AYFVIFLGVCFVLGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGASFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G + +L +V +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWWDWGVVWYGVGLVLVLVVGSVVGGILEGWKLGVVTVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISG 150
++ G L+ + + + G
Sbjct: 122 GVFSVRLDFSGVALFYSWGTGMLMVG 147
>gi|327492833|ref|YP_004347715.1| NADH dehydrogenase subunit 6 [Tylerius spinosissimus]
gi|327392656|dbj|BAK10079.1| NADH dehydrogenase subunit 6 [Tylerius spinosissimus]
Length = 173
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNP--IYSVFSLIFAFVNAAGLFLLLGAEFVAMITL 59
++ +L F L + + +VV NP Y VF+L+ + G +L G F++++ L
Sbjct: 1 MLYALVFLLLGMLVV----MVVLSTNPAPFYGVFNLVLVALLCCGAIILHGGTFLSLVLL 56
Query: 60 VVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
++Y+G ++V F++ + A + + + L +
Sbjct: 57 LIYMGGMLVVFIYSSALSADKDPEAPTGWQVSLFFFGYFSFVLGVLGM 104
>gi|323152297|gb|EFZ38586.1| major Facilitator Superfamily protein [Escherichia coli EPECa14]
Length = 436
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 20/175 (11%), Positives = 54/175 (30%), Gaps = 5/175 (2%)
Query: 1 MVMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
M M + Y+ + ++ + + + + ++F LF L ++
Sbjct: 47 MHM-VIVSYVLTVAVMLPASGWLADKVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLAR 105
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGE 120
G + + + + I E + + + +++
Sbjct: 106 ALQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHW 165
Query: 121 LSRLVFKGNNVENIGKVL----YTQYAYPLEISGFILLLSMIGAIVLMLRHRRDI 171
+ + + I ++ YT ++SGF+LL + + L L +
Sbjct: 166 IFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMAVLTLALDGSKGT 220
>gi|331685699|ref|ZP_08386282.1| protein YijP [Escherichia coli H299]
gi|331077170|gb|EGI48385.1| protein YijP [Escherichia coli H299]
Length = 577
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|293413397|ref|ZP_06656058.1| conserved hypothetical protein [Escherichia coli B354]
gi|291468145|gb|EFF10643.1| conserved hypothetical protein [Escherichia coli B354]
Length = 577
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|215489292|ref|YP_002331723.1| hypothetical protein E2348C_4267 [Escherichia coli O127:H6 str.
E2348/69]
gi|215267364|emb|CAS11815.1| conserved inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
Length = 577
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|108793377|ref|YP_637100.1| NADH dehydrogenase subunit 6 [Gavia pacifica]
gi|108755482|dbj|BAE95717.1| NADH dehydrogenase subunit 6 [Gavia pacifica]
Length = 173
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 63/165 (38%), Gaps = 1/165 (0%)
Query: 10 LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVF 69
S + V + +P Y V L+ A V G L LG FV+++ +VY+G ++V
Sbjct: 7 FLSVCFALGGLAVASNPSPYYGVVGLVLASVVGCGWLLSLGVSFVSLVLFMVYLGGMLVV 66
Query: 70 FLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGN 129
F++ + + A + G F +L + V +
Sbjct: 67 FVYSVSLAADPFPEAWGDWRVVGYGVGFTLVLVVGVAVGGFVEWWKLGVVTVDGGGMFSV 126
Query: 130 NVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ Y ++G+ LLL++ + L+ R R
Sbjct: 127 RLDFSGVAMFYSYGVGMFLVAGWGLLLTLFVVLELVRGLSRGALR 171
>gi|13786597|ref|NP_112662.1| NADH dehydrogenase subunit 6 [Isoodon macrourus]
gi|13676812|gb|AAK38292.1|AF358864_10 NADH dehydrogenase subunit 6 [Isoodon macrourus]
Length = 166
Score = 34.2 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 42/108 (38%)
Query: 3 MQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVY 62
M+ + +LFS + I + +P+Y SL+ + + + LG F+ ++ +VY
Sbjct: 1 MKMMIIFLFSVLLIFGFVAFASKPSPVYGGLSLVASGGVGCAIVVSLGDTFLGLVVFLVY 60
Query: 63 VGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCAS 110
+G ++V F + M + F ++ +
Sbjct: 61 LGGMLVVFGYTAAMATEEYPETWVGNMVAFSMFVITLLIEIVWYISGG 108
>gi|296099582|gb|ADG95190.1| NADH dehydrogenase subunit 6 [Polypterus bichir lapradei]
Length = 167
Score = 34.2 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 49/110 (44%)
Query: 6 LFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGA 65
+ +FS + +IS V + +P ++ F L+ G+ + G F++MI ++Y+G
Sbjct: 2 VLMVVFSVIFLISLIAVASNPSPYFAAFGLMVGAGAGCGMLMQCGMTFLSMILFLIYLGG 61
Query: 66 VIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVF 115
++V F + + A + ++ ++ +V +F VF
Sbjct: 62 MLVVFAYSAALAAEPYPRAWGSWEVFSYVLGYVLLIVGVWVVFVGDFEVF 111
>gi|312965388|ref|ZP_07779621.1| UPF0141 membrane protein yijP [Escherichia coli 2362-75]
gi|312290062|gb|EFR17949.1| UPF0141 membrane protein yijP [Escherichia coli 2362-75]
gi|320196774|gb|EFW71396.1| UPF0141 membrane protein YijP [Escherichia coli WV_060327]
Length = 577
Score = 34.2 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|281308306|gb|ADA58301.1| NADH dehydrogenase subunit 6 [Buteo ridgwayi]
gi|281308308|gb|ADA58302.1| NADH dehydrogenase subunit 6 [Buteo ridgwayi]
Length = 172
Score = 34.2 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 67/169 (39%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F L ++ V + +P Y V L+ + G + LG FVA++ +VY+G
Sbjct: 2 AYFVLLLGMGFVLGGLAVASNPSPYYGVVGLVLGSIVGCGWLVSLGVPFVALVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G+ + +L ++V +
Sbjct: 62 GMLVVFVYSVCLAADPFPEAWGDWRVLGYGAGMVLVLVVGVVVGGVECWKTGVVTVDNGG 121
Query: 125 VFKGNNVENIGKVLYTQYAYPLEISGFILLLSMIGAIVLMLRHRRDIKR 173
F + + Y+ A ++G+ LLL++ + L+ R R
Sbjct: 122 TFVDRLDFSGVAMFYSWGAGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 170
>gi|218697669|ref|YP_002405336.1| hypothetical protein EC55989_4437 [Escherichia coli 55989]
gi|300937141|ref|ZP_07151997.1| arylsulfatase [Escherichia coli MS 21-1]
gi|218354401|emb|CAV01184.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|300457784|gb|EFK21277.1| arylsulfatase [Escherichia coli MS 21-1]
Length = 577
Score = 34.2 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|5834856|ref|NP_006927.1|ND6_10016 NADH dehydrogenase subunit 6 [Gallus gallus]
gi|71658063|ref|YP_272058.1| NADH dehydrogenase subunit 6 [Gallus gallus spadiceus]
gi|71658091|ref|YP_272071.1| NADH dehydrogenase subunit 6 [Gallus gallus gallus]
gi|128810|sp|P18941|NU6M_CHICK RecName: Full=NADH-ubiquinone oxidoreductase chain 6; AltName:
Full=NADH dehydrogenase subunit 6
gi|12973|emb|CAA36637.1| unnamed protein product [Gallus gallus]
gi|28557167|dbj|BAC57587.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|28629851|gb|AAO44996.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|28629864|gb|AAO45008.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|42557373|dbj|BAD11051.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|42557387|dbj|BAD11064.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|42558162|dbj|BAD11126.1| NADH dehydrogenase subunit VI [Gallus gallus]
gi|71040178|dbj|BAE16038.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|71040192|dbj|BAE16051.1| NADH dehydrogenase subunit 6 [Gallus sonneratii]
gi|71040206|dbj|BAE16064.1| NADH dehydrogenase subunit 6 [Gallus gallus spadiceus]
gi|71040220|dbj|BAE16077.1| NADH dehydrogenase subunit 6 [Gallus gallus gallus]
gi|71040290|dbj|BAE16142.1| NADH dehydrogenase subunit 6 [Gallus sonneratii]
gi|283048766|gb|ADB06580.1| NADH dehydrogenase subunit 6 [Gallus gallus jabouillei]
gi|283048781|gb|ADB06594.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283048809|gb|ADB06620.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283048837|gb|ADB06646.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283048851|gb|ADB06659.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283048865|gb|ADB06672.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283048879|gb|ADB06685.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283048907|gb|ADB06711.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283048921|gb|ADB06724.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283048935|gb|ADB06737.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283048949|gb|ADB06750.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049019|gb|ADB06815.1| NADH dehydrogenase subunit 6 [Gallus gallus spadiceus]
gi|283049033|gb|ADB06828.1| NADH dehydrogenase subunit 6 [Gallus gallus spadiceus]
gi|283049047|gb|ADB06841.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049061|gb|ADB06854.1| NADH dehydrogenase subunit 6 [Gallus gallus spadiceus]
gi|283049075|gb|ADB06867.1| NADH dehydrogenase subunit 6 [Gallus gallus jabouillei]
gi|283049089|gb|ADB06880.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049103|gb|ADB06893.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049117|gb|ADB06906.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049131|gb|ADB06919.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049145|gb|ADB06932.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049187|gb|ADB06971.1| NADH dehydrogenase subunit 6 [Gallus gallus spadiceus]
gi|283049201|gb|ADB06984.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049215|gb|ADB06997.1| NADH dehydrogenase subunit 6 [Gallus gallus spadiceus]
gi|283049229|gb|ADB07010.1| NADH dehydrogenase subunit 6 [Gallus gallus murghi]
gi|283049243|gb|ADB07023.1| NADH dehydrogenase subunit 6 [Gallus gallus murghi]
gi|283049257|gb|ADB07036.1| NADH dehydrogenase subunit 6 [Gallus gallus murghi]
gi|283049299|gb|ADB07075.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049313|gb|ADB07088.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049327|gb|ADB07101.1| NADH dehydrogenase subunit 6 [Gallus gallus]
gi|283049355|gb|ADB07127.1| NADH dehydrogenase subunit 6 [Gallus gallus spadiceus]
gi|283049383|gb|ADB07153.1| NADH dehydrogenase subunit 6 [Gallus gallus]
Length = 173
Score = 34.2 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 65/170 (38%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G + LG FV++ +VY+G
Sbjct: 2 TYFVIFLGICFMLGVLAVASNPSPYYGVVGLVVASVMGCGWLVSLGVSFVSLALFLVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ ++ +++ +
Sbjct: 62 GMLVVFVYSVSLAADPYPEAWGDWRVVGYGLGFVLVVWMGVVLGGLVDFWKVGVVTVDGG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 122 GVSFARLDFSGVAVFYSCGVGLFLVAGWGLLLALFVVLELVRGLSRGAIR 171
>gi|291485609|dbj|BAI86684.1| monovalent cation/H+ antiporter subunit A [Bacillus subtilis subsp.
natto BEST195]
Length = 801
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
+ + + I ++ V R+ + ++ +L A F++ A +A+ LV+ +V +
Sbjct: 631 IILTLVMISATVATVFARSRLTAIIALGVVGYTLALFFVIFRAPDLALTQLVIETISVAL 690
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F L + + + K R F + FI L +IV S + S F
Sbjct: 691 FLLCFYHLPKLRL----KTKTRTFRMTNFIISLGVGIIVTLLGIASSSQRTKDSIASFFV 746
Query: 129 NNVENIG 135
+ ++G
Sbjct: 747 KHSHDLG 753
>gi|293417463|ref|ZP_06660087.1| hypothetical protein ECDG_04533 [Escherichia coli B185]
gi|291430983|gb|EFF03979.1| hypothetical protein ECDG_04533 [Escherichia coli B185]
Length = 577
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|223976118|ref|YP_002600881.1| NADH dehydrogenase subunit 6 [Antilope cervicapra]
gi|223972287|dbj|BAH23326.1| NADH dehydrogenase subunit 6 [Antilope cervicapra]
Length = 175
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 11/174 (6%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M + F + S + ++ + +PIY LI + G+ L G F+ ++ ++
Sbjct: 1 MMTYIVF-ILSIVFVVGFVGFSSKPSPIYGGLGLIVSGGVGCGIVLNFGGSFLGLMVFLI 59
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV---------CASNF 112
Y+G ++V F + M K ++ ++ F
Sbjct: 60 YLGGMMVVFGYTTAMATEQYPEVWVSNKAVLGAFVTGLLMEFLMVYYVLKDKEVEIVFEF 119
Query: 113 MVFSAEGELSRLVFKGNNVENIG-KVLYTQYAYPLEISGFILLLSMIGAIVLML 165
+ E +G LY+ + + ++G+ LL+ ++ + +
Sbjct: 120 NGLGDWVIYDTGDSGFFSEEAMGIAALYSYGTWLVIVTGWSLLIGVVVIMEITR 173
>gi|215979761|ref|YP_002333256.1| NADH dehydrogenase subunit 6 [Torquigener brevipennis]
gi|215422711|dbj|BAG85546.1| NADH dehydrogenase subunit 6 [Torquigener brevipennis]
Length = 173
Score = 34.2 bits (77), Expect = 9.7, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 6/118 (5%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNP--IYSVFSLIFAFVNAAGLFLLLGAEFVAMITL 59
+ +L F L + + ++V NP Y VF+L+ + G +L G F++++ L
Sbjct: 1 MFYALVFLLLGMLVV----MIVLSTNPAPFYGVFNLVLVALLCCGASVLHGGTFLSLVLL 56
Query: 60 VVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSA 117
++Y+G ++V F++ + A + + + L
Sbjct: 57 MIYMGGMLVVFIYSSALSADKDPEAPTGWQVVLFFFGYFFFVFGILSTNTVLDEELWW 114
>gi|291391916|ref|XP_002712304.1| PREDICTED: CG9723-like [Oryctolagus cuniculus]
Length = 607
Score = 34.2 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 13/95 (13%), Positives = 32/95 (33%), Gaps = 6/95 (6%)
Query: 26 RNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVI--VFFLFIIMMLDIDIEV 83
RN + L+ AG+FL L AE ++ + Y + V + ++L + +
Sbjct: 332 RNIVDVRLFLV----CVAGVFLFLYAETLSQSAVFYYSSGTVLGVLMTLVFVLLLVKRYI 387
Query: 84 AEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAE 118
+ + + + + ++
Sbjct: 388 PKYSTFWALMVGCWFASVYVVCQLMEDMKWLWYEN 422
>gi|300780412|ref|ZP_07090268.1| CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A
[Corynebacterium genitalium ATCC 33030]
gi|300534522|gb|EFK55581.1| CPA3 family monovalent cation:proton (H+) antiporter-3 subunit A
[Corynebacterium genitalium ATCC 33030]
Length = 1016
Score = 34.2 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 12/165 (7%)
Query: 12 SFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFL 71
+ + +I + RN + V + A +F L GA +A+ ++V ++V
Sbjct: 619 AIILMICAVAATRARNRLSIVILVGMTGYALAFMFALHGAPDLALTQVLVETIVMVV--- 675
Query: 72 FIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNV 131
M++ + +K + L V + SA F +
Sbjct: 676 --FMLVLRKLPTDVDVRKDLDNRLRAWLSVGTGLSVVVVAMVAMSARTATPISEFMPDLA 733
Query: 132 ENIGKVLYTQYAYPLEISGF-------ILLLSMIGAIVLMLRHRR 169
IG T +++ +L+++ G L+ R +
Sbjct: 734 FEIGHGRNTVNVLLVDLRAADTLGEISVLVIAATGVASLIYRTQS 778
>gi|82778877|ref|YP_405226.1| hypothetical protein SDY_3790 [Shigella dysenteriae Sd197]
gi|309783892|ref|ZP_07678537.1| UPF0141 membrane protein yijP [Shigella dysenteriae 1617]
gi|81243025|gb|ABB63735.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308928263|gb|EFP73725.1| UPF0141 membrane protein yijP [Shigella dysenteriae 1617]
Length = 577
Score = 34.2 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|16131793|ref|NP_418390.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. MG1655]
gi|89110075|ref|AP_003855.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. W3110]
gi|170083424|ref|YP_001732744.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|238903020|ref|YP_002928816.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|256026007|ref|ZP_05439872.1| hypothetical protein E4_21726 [Escherichia sp. 4_1_40B]
gi|300948262|ref|ZP_07162379.1| arylsulfatase [Escherichia coli MS 116-1]
gi|300954686|ref|ZP_07167125.1| arylsulfatase [Escherichia coli MS 175-1]
gi|301024101|ref|ZP_07187814.1| arylsulfatase [Escherichia coli MS 196-1]
gi|301645147|ref|ZP_07245105.1| arylsulfatase [Escherichia coli MS 146-1]
gi|307140654|ref|ZP_07500010.1| hypothetical protein EcolH7_21247 [Escherichia coli H736]
gi|331644692|ref|ZP_08345811.1| protein YijP [Escherichia coli H736]
gi|259586167|sp|P0CB39|CPTA_ECOLI RecName: Full=Phosphoethanolamine transferase CptA
gi|396302|gb|AAC43061.1| ORF_f577 [Escherichia coli str. K-12 substr. MG1655]
gi|1790392|gb|AAC76937.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. MG1655]
gi|85676106|dbj|BAE77356.1| conserved inner membrane protein [Escherichia coli str. K12 substr.
W3110]
gi|169891259|gb|ACB04966.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|238860203|gb|ACR62201.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|260451209|gb|ACX41631.1| sulfatase [Escherichia coli DH1]
gi|299880556|gb|EFI88767.1| arylsulfatase [Escherichia coli MS 196-1]
gi|300318356|gb|EFJ68140.1| arylsulfatase [Escherichia coli MS 175-1]
gi|300452205|gb|EFK15825.1| arylsulfatase [Escherichia coli MS 116-1]
gi|301076574|gb|EFK91380.1| arylsulfatase [Escherichia coli MS 146-1]
gi|309704379|emb|CBJ03728.1| putative membrane protein [Escherichia coli ETEC H10407]
gi|315138520|dbj|BAJ45679.1| hypothetical protein ECDH1ME8569_3823 [Escherichia coli DH1]
gi|315617751|gb|EFU98356.1| UPF0141 membrane protein yijP [Escherichia coli 3431]
gi|323939036|gb|EGB35254.1| sulfatase [Escherichia coli E482]
gi|331036154|gb|EGI08390.1| protein YijP [Escherichia coli H736]
Length = 577
Score = 34.2 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|74314457|ref|YP_312876.1| hypothetical protein SSON_4128 [Shigella sonnei Ss046]
gi|82546306|ref|YP_410253.1| hypothetical protein SBO_3974 [Shigella boydii Sb227]
gi|157163432|ref|YP_001460750.1| hypothetical protein EcHS_A4189 [Escherichia coli HS]
gi|170022033|ref|YP_001726987.1| hypothetical protein EcolC_4061 [Escherichia coli ATCC 8739]
gi|187732871|ref|YP_001882649.1| hypothetical protein SbBS512_E4441 [Shigella boydii CDC 3083-94]
gi|188492953|ref|ZP_03000223.1| putative sulfatase [Escherichia coli 53638]
gi|193068100|ref|ZP_03049065.1| putative sulfatase [Escherichia coli E110019]
gi|194438360|ref|ZP_03070451.1| putative sulfatase [Escherichia coli 101-1]
gi|253775406|ref|YP_003038237.1| hypothetical protein ECBD_4069 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163905|ref|YP_003047013.1| hypothetical protein ECB_03840 [Escherichia coli B str. REL606]
gi|300819372|ref|ZP_07099570.1| arylsulfatase [Escherichia coli MS 107-1]
gi|300916991|ref|ZP_07133689.1| arylsulfatase [Escherichia coli MS 115-1]
gi|300928734|ref|ZP_07144250.1| arylsulfatase [Escherichia coli MS 187-1]
gi|312971753|ref|ZP_07785927.1| UPF0141 membrane protein yijP [Escherichia coli 1827-70]
gi|73857934|gb|AAZ90641.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81247717|gb|ABB68425.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|157069112|gb|ABV08367.1| putative sulfatase [Escherichia coli HS]
gi|169756961|gb|ACA79660.1| sulfatase [Escherichia coli ATCC 8739]
gi|187429863|gb|ACD09137.1| putative sulfatase [Shigella boydii CDC 3083-94]
gi|188488152|gb|EDU63255.1| putative sulfatase [Escherichia coli 53638]
gi|192958720|gb|EDV89158.1| putative sulfatase [Escherichia coli E110019]
gi|194422797|gb|EDX38793.1| putative sulfatase [Escherichia coli 101-1]
gi|242379491|emb|CAQ34306.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|253326450|gb|ACT31052.1| sulfatase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975806|gb|ACT41477.1| conserved inner membrane protein [Escherichia coli B str. REL606]
gi|253979963|gb|ACT45633.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|300415743|gb|EFJ99053.1| arylsulfatase [Escherichia coli MS 115-1]
gi|300463259|gb|EFK26752.1| arylsulfatase [Escherichia coli MS 187-1]
gi|300528055|gb|EFK49117.1| arylsulfatase [Escherichia coli MS 107-1]
gi|310334130|gb|EFQ00335.1| UPF0141 membrane protein yijP [Escherichia coli 1827-70]
gi|320173027|gb|EFW48249.1| UPF0141 membrane protein YijP [Shigella dysenteriae CDC 74-1112]
gi|320182816|gb|EFW57693.1| UPF0141 membrane protein YijP [Shigella flexneri CDC 796-83]
gi|323167434|gb|EFZ53142.1| hypothetical protein SS53G_2364 [Shigella sonnei 53G]
gi|323174304|gb|EFZ59930.1| hypothetical protein ECLT68_1000 [Escherichia coli LT-68]
gi|323959276|gb|EGB54937.1| sulfatase [Escherichia coli H489]
gi|323969707|gb|EGB64991.1| sulfatase [Escherichia coli TA007]
gi|332088291|gb|EGI93411.1| hypothetical protein SB359474_4613 [Shigella boydii 3594-74]
Length = 577
Score = 34.2 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|331655653|ref|ZP_08356645.1| protein YijP [Escherichia coli M718]
gi|331665611|ref|ZP_08366509.1| protein YijP [Escherichia coli TA143]
gi|323974243|gb|EGB69373.1| sulfatase [Escherichia coli TW10509]
gi|331046754|gb|EGI18839.1| protein YijP [Escherichia coli M718]
gi|331057296|gb|EGI29286.1| protein YijP [Escherichia coli TA143]
Length = 577
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|301023727|ref|ZP_07187470.1| arylsulfatase [Escherichia coli MS 69-1]
gi|300396911|gb|EFJ80449.1| arylsulfatase [Escherichia coli MS 69-1]
Length = 577
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 53/163 (32%), Gaps = 23/163 (14%)
Query: 5 SLFFYLFSFMAIISSFLVVT--------VRNPIYSVFSLIFAFVN-------AAGLFLLL 49
L+F+ FS ++ + + ++ + ++S LI F+ AA + ++L
Sbjct: 21 LLYFWFFS--TLLQAIIYISGYSGTNGIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVL 78
Query: 50 GAEFVAM-ITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSF----FIGILAAE 104
A +A V+Y LF++ + + + + +
Sbjct: 79 WAASLAALCYYVIYGQEFSQSVLFVMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLL 138
Query: 105 LIVCASNFMVFSAEGELSRLVFKGNNVENIGKVLYTQYAYPLE 147
++ +S + G + I + + P E
Sbjct: 139 WTRLRPVYIPKPWRYVVSFALLYGLILHPIAMNTFIK-NKPFE 180
>gi|213850073|ref|ZP_03380971.1| hypothetical protein SentesT_00115 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 552
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 39/128 (30%), Gaps = 12/128 (9%)
Query: 27 NPIYSVFSLIFAFVN-------AAGLFLLLGAEFVAMI-TLVVYVGAVIVFFLFIIMMLD 78
+ +YS LI F+ AA + ++L A +A + V+Y LF++ +
Sbjct: 24 SLLYSSLWLIPVFLFPGRIRVIAAVIGVVLWAASLAALSYYVIYGQEFSQSVLFVMFETN 83
Query: 79 IDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGEL----SRLVFKGNNVENI 134
+ + I+ + S + G + I
Sbjct: 84 ANEASEYLSQYFSLKIVLVALAYTVAAILLWTRLRPVYIPSPWRYLVSFALLYGLILHPI 143
Query: 135 GKVLYTQY 142
+ ++
Sbjct: 144 AMNTFIKH 151
>gi|148922598|ref|YP_001293630.1| NADH dehydrogenase subunit 6 [Mammut americanum]
gi|148540940|gb|ABQ86190.1| NADH dehydrogenase subunit 6 [Mammut americanum]
Length = 175
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 63/169 (37%), Gaps = 10/169 (5%)
Query: 9 YLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIV 68
++ S + +I + +P+Y SL+ + G+ + G F+ ++ +VY+G ++V
Sbjct: 6 FIMSVLYVIGFIGFSSKPSPVYGGMSLVVSGGLGCGIVMSSGGSFLGLVVFLVYLGGMMV 65
Query: 69 FFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKG 128
F + I M + ++ +++ + L
Sbjct: 66 VFGYTIAMATEEYPETWGSNVVVLSAFLVGLLMEIVMVMWMFSGEYELVGFYFGGLEGFM 125
Query: 129 NNVENI----------GKVLYTQYAYPLEISGFILLLSMIGAIVLMLRH 167
E I G LY+ + L ++G++L +S+ I + +
Sbjct: 126 VFGEEIFEHTCEDYSGGASLYSYGVWFLAVAGWMLFVSIFIVIEITRKR 174
>gi|66276071|ref|YP_238215.1| NADH dehydrogenase subunit 6 [Larus dominicanus]
gi|34223678|gb|AAQ63032.1| NADH dehydrogenase subunit 6 [Larus dominicanus]
Length = 173
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 65/170 (38%), Gaps = 1/170 (0%)
Query: 5 SLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVG 64
+ F ++ V + +P Y V L+ A V G L LG FV+++ +VY+G
Sbjct: 2 TYFVLFLGLCFVLGGLAVASNPSPYYGVVGLVLASVAGCGWLLSLGVSFVSLVLFMVYLG 61
Query: 65 AVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIVCASNFMVFSAEGELSRL 124
++V F++ + + A + G F+ +L +V +
Sbjct: 62 GMLVVFVYSVSLAADPFPEAWGDWRVVGYGVGFVLVLVVGGVVGGLVEFWHPGVITVDSG 121
Query: 125 VFKGNNVENIGKVLYTQYAY-PLEISGFILLLSMIGAIVLMLRHRRDIKR 173
++ G ++ ++G+ LLL++ + L+ R R
Sbjct: 122 GMFSVRLDFSGVAMFYSCGVGMFLVAGWGLLLTLFVVLELVRGLSRGAIR 171
>gi|89100281|ref|ZP_01173147.1| MrpA [Bacillus sp. NRRL B-14911]
gi|89085019|gb|EAR64154.1| MrpA [Bacillus sp. NRRL B-14911]
Length = 762
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 3 MQSLFFY--LFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLV 60
+ S+ FY L + + +S ++ ++ + S+ L A F+L A +A+ LV
Sbjct: 586 LSSIGFYEVLLALIIAAASISILFAKSRLTSIILLGAVGYTVALFFVLFRAPDLALTQLV 645
Query: 61 VYVGAVIVFFLFIIMMLDIDIEVAEPRKK 89
+ +V +F L + + R K
Sbjct: 646 IETVSVSLFLLCFYHLPKLKRNEERIRFK 674
>gi|327330438|gb|EGE72187.1| YhgE/Pip protein [Propionibacterium acnes HL097PA1]
Length = 728
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 56/145 (38%), Gaps = 15/145 (10%)
Query: 31 SVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKR 90
+V +L A++ A G++L+LG + V + +V + ++ +
Sbjct: 565 AVIALAGAYIMAFGVWLILGLDPVHPWYFIGFVTLASLSWMMLAF--------WMRLIFG 616
Query: 91 GFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVEN-------IGKVLYTQYA 143
+ F+ +L +L C F V +L + I + A
Sbjct: 617 SPQTAIFLILLVLQLPTCGGTFPVTMLPPVYQKLAVVMPMKYSVDAFRVLISGGPMSTLA 676
Query: 144 YPLEISGFILLLSMIGAIVLMLRHR 168
+ G IL++SMI +VL+ RH+
Sbjct: 677 LGFAVEGGILVISMIITLVLVHRHK 701
>gi|313818738|gb|EFS56452.1| YhgE/Pip protein [Propionibacterium acnes HL046PA2]
Length = 728
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 56/145 (38%), Gaps = 15/145 (10%)
Query: 31 SVFSLIFAFVNAAGLFLLLGAEFVAMITLVVYVGAVIVFFLFIIMMLDIDIEVAEPRKKR 90
+V +L A++ A G++L+LG + V + +V + ++ +
Sbjct: 565 AVIALAGAYIMAFGVWLILGLDPVHPWYFIGFVTLASLSWMMLAF--------WMRLIFG 616
Query: 91 GFLGSFFIGILAAELIVCASNFMVFSAEGELSRLVFKGNNVEN-------IGKVLYTQYA 143
+ F+ +L +L C F V +L + I + A
Sbjct: 617 SPQTAIFLILLVLQLPTCGGTFPVTMLPPVYQKLAVVMPMKYSVDAFRVLISGGPMSTLA 676
Query: 144 YPLEISGFILLLSMIGAIVLMLRHR 168
+ G IL++SMI +VL+ RH+
Sbjct: 677 LGFAVEGGILVISMIITLVLVHRHK 701
>gi|37596461|gb|AAQ94991.1| NADH dehydrogenase subunit 6 [Estrilda paludicola]
Length = 159
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F ++ V + +P Y V L+ A V G + LG FV+++ ++V
Sbjct: 1 MMEFVLF--LGLCFVLGGLGVASNPSPYYGVMGLVVAAVAGCGWLVSLGVSFVSLVLVMV 58
Query: 62 YVGAVIVFFLFIIMM 76
Y+G ++V F++ + +
Sbjct: 59 YLGGMLVVFVYSVSL 73
>gi|9230591|gb|AAF85920.1|AF171656_2 NADH dehydrogenase subunit 6 [Loxia scotica]
Length = 172
Score = 34.2 bits (77), Expect = 9.9, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 2 VMQSLFFYLFSFMAIISSFLVVTVRNPIYSVFSLIFAFVNAAGLFLLLGAEFVAMITLVV 61
+M+ + F + V + +P Y V L+ A V G + LG F++++ ++V
Sbjct: 1 MMEFVLF--LGVCFALGGLAVASNPSPYYGVLGLVVAAVAGCGWLVSLGVSFISLVLVMV 58
Query: 62 YVGAVIVFFLFIIMMLDIDIEVAEPRKKRGFLGSFFIGILAAELIV 107
Y+G ++V F++ + + + G ++ L++
Sbjct: 59 YLGGMLVVFVYSVSLAADPYPESWVSWGVVGYGLGMGLVVLVGLVM 104
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.320 0.138 0.364
Lambda K H
0.267 0.0423 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,768,500,806
Number of Sequences: 14124377
Number of extensions: 84221581
Number of successful extensions: 1116899
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 5655
Number of HSP's successfully gapped in prelim test: 28101
Number of HSP's that attempted gapping in prelim test: 1083850
Number of HSP's gapped (non-prelim): 50716
length of query: 199
length of database: 4,842,793,630
effective HSP length: 132
effective length of query: 67
effective length of database: 2,978,375,866
effective search space: 199551183022
effective search space used: 199551183022
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.3 bits)
S2: 77 (34.2 bits)