HHsearch alignment for GI: 254780864 and conserved domain: pfam00420
>pfam00420 Oxidored_q2 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L.
Probab=99.83 E-value=2.4e-20 Score=126.61 Aligned_cols=68 Identities=37% Similarity=0.587 Sum_probs=66.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
Q ss_conf 96999999999999999997378315999999999999999999999999997217857999962189
Q gi|254780864|r 1 MSIELMLLAVNLNMISFSAYMQDISGQIFSLFILLVAAAETSIGLAILVIFYRKCGSISVDDFNQMKG 68 (68)
Q Consensus 1 m~iElmLnavnl~~v~f~~~~~~~~Gqi~~lfil~iAAaEaAiGLAi~v~~yR~~~si~~d~~~~LkG 68 (68)
T Consensus 29 l~lE~m~~~~~l~~~~~~~~~~~~~~~~~~l~~l~iaa~E~aigLallv~~~R~~gt~~~~~l~~lk~ 96 (96)
T pfam00420 29 LCLELMMLSLFLLLVLFSLLLADPLPQALPLTLLVFAACEAALGLALLVALYRTHGTDDVQSLNLLKC 96 (96)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
T ss_conf 99999999999999999998578414999999999999999999999999999617660866153269