HHsearch alignment for GI: 254780865 and conserved domain: MTH00011
>MTH00011 ND2 NADH dehydrogenase subunit 2; Validated.
Probab=100.00 E-value=0 Score=356.28 Aligned_cols=325 Identities=18% Similarity=0.229 Sum_probs=256.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 18999999999999999865589999888888568899887620344541036300022122478999999999999620
Q gi|254780865|r 117 RFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHS 196 (666)
Q Consensus 117 ~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs 196 (666)
T Consensus 7 ~~~lf~~~li~g~l~~isS~~~~~lwvglEl~~l~~~~Li~~~-~~~~s~eaa~KYFl~qs~~S~~~L~g~~~~~~~~~~ 85 (333)
T MTH00011 7 TMLLFFSTLTMGTLMALSSNNWLFLWMGMELNLLSFVPLIASS-QMNQETEAAVKYFLAQALGSGLLLMSSVMSMMWSSS 85 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999899999999999999999999859-995089999999999999999999999999998888
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC-CCCCCC
Q ss_conf 5989999875431000124555566666666532024553179999999999986543343234312400002-332210
Q gi|254780865|r 197 VDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEG-PTPVSA 275 (666)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~a-PtpvSA 275 (666)
T Consensus 86 ~~---------------------------------------~~~~~~~li~~~l~~Klg~~PfH~W~pdv~~~~~~~~~~ 126 (333)
T MTH00011 86 SL---------------------------------------MKNTTALMLLLSILLKLGSAPCHFWYPSVMSSISWLSCL 126 (333)
T ss_pred HH---------------------------------------HHHHHHHHHHHHHHHHHHCCCHHHCHHHHHCCCCHHHHH
T ss_conf 88---------------------------------------778999999999999980021220338887379789999
Q ss_pred CHHHHHHHHHHHH-HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 0013456666777-999963013578134444567777788763001110245202443210001353344565531110
Q gi|254780865|r 276 LIHAATMVTAGVF-LVARMSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYGA 354 (666)
Q Consensus 276 llhs~~mv~~Gvy-~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~~~ 354 (666)
T Consensus 127 ~l-s-t~~Ki~~l~~l~~~~~-----~~~~~~~~~~~~lS~lvG~i~al~Q~~lKrllAYSSI~h~G~~l~~~~~~~~~~ 199 (333)
T MTH00011 127 IL-S-TWQKLAPLSILNFITP-----HNITAYILSMAAMNALVGGLGGMNQTQLRALMAYSSIGHLGWMMSMAIVFKPSI 199 (333)
T ss_pred HH-H-HHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99-9-9999989999999974-----206999999999999999875443023009999999999999999999856999
Q ss_pred HHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 03465553100012222101232111000011012776154669999999886421011000000002443217888888
Q gi|254780865|r 355 SIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEV 434 (666)
Q Consensus 355 a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~ 434 (666)
T Consensus 200 ~~~y~~~y~~~~~~lf~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~i~llSLaGiP------P~~GF~~K~~i~~~ 268 (333)
T MTH00011 200 FIIYFMVYCIITSPLMLMMFYL-----SSFNSKFNSKLSSMSYITFMSLMILLFSLGGLP------PFTGFLPKWMIINS 268 (333)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH------HHCHHHHHHHHHHH
T ss_conf 9999999999999999999999-----864299998398885999999999998762131------01218899999999
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 986410244444210221134543331034245787443321000000135533320245656663210000
Q gi|254780865|r 435 AYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISHKIHESPLVMQIPLFILAIGSIFFGFIF 506 (666)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~ 506 (666)
T Consensus 269 ~~~~g~~-~l~~~lil~S~isl~yYlRi~~~~~~~~p~~~~~------~~~~~~~~~~~~~~~~~~~~g~~p 333 (333)
T MTH00011 269 LTSSEMS-LILLTLITGSLMNLFYYLSIIFNFITMMPTCSNL------TSAPTPGANLILTSICTLTLGLAP 333 (333)
T ss_pred HHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC------CCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 9987839-9999999999999999999999998179999988------889842699999999999970899