HHsearch alignment for GI: 254780865 and conserved domain: MTH00041
>MTH00041 ND2 NADH dehydrogenase subunit 2; Validated.
Probab=100.00 E-value=0 Score=376.66 Aligned_cols=302 Identities=17% Similarity=0.283 Sum_probs=251.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 18999999999999999865589999888888568899887620344541036300022122478999999999999620
Q gi|254780865|r 117 RFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHS 196 (666)
Q Consensus 117 ~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs 196 (666)
T Consensus 3 ~~~~ll~~~~~G~~~~~sS~~~~~~wvglEi~sls~~~Li~~~-~~~~s~EAa~KYFl~qa~aS~llL~g~~l~~~~~gs 81 (350)
T MTH00041 3 VLLFLITNVILGTIIVVSSHHWFLIWVGLELNTLSIIPILCSN-FTPRNVEATIKYFLVQAFSAAILLNGALIQAWLSGS 81 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999818-994289999999999999999999999999999862
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC
Q ss_conf 59899998754310001245555666666665320245531799999999999865433432343124000023322100
Q gi|254780865|r 197 VDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSAL 276 (666)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAl 276 (666)
T Consensus 82 ~~i~~~~~-----------------------------------~~~~~li~~al~~Klgl~PfH~W~Pdv~~g~~~~~~~ 126 (350)
T MTH00041 82 WSINGPLN-----------------------------------SLSSIIITIALGLKLGLFPCHFWFPDVIQGLNFLQGL 126 (350)
T ss_pred HHHHHHHH-----------------------------------HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH
T ss_conf 37654777-----------------------------------9999999999998538415988887685667289999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHH
Q ss_conf 01345666677799996301357813444456777778876300111024520244321000135334456553111003
Q gi|254780865|r 277 IHAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYGASI 356 (666)
Q Consensus 277 lhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~~~a~ 356 (666)
T Consensus 127 ~lst~~Kiap~~ll~~~~~~-----~~~~il~~l~~lS~liG~~~al~Q~~lkrlLAYSSIsh~G~ml~~~~~~~-~~~~ 200 (350)
T MTH00041 127 ILSTWQKIAPLIILIYIINN-----LNSNILITLGILSVLIGGWGGLNQTQTRKILAFSSIAHMGWIIITSAYSL-NAGI 200 (350)
T ss_pred HHHHHHHHHHHHHHHHHHCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_conf 99999999999999999600-----01889999999879999999998877879999989989999999999869-9999
Q ss_pred HHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 46555310001222210123211100001101277615466999999988642101100000000244321788888898
Q gi|254780865|r 357 FHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAY 436 (666)
Q Consensus 357 ~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~ 436 (666)
T Consensus 201 ~~~~~Y~~~~~~lf~~~-----~~~~~~~i~~l~gl~~~~p~~~~~~~i~lLSLaGlP------Pl~GF~~K~lil~~li 269 (350)
T MTH00041 201 IMFLIYIIINTSIFLIF-----NEFNISTLSHLNRLSYLNPISAATLILVILSLGGLP------PLTGFLNKFISLNCLI 269 (350)
T ss_pred HHHHHHHHHHHHHHHHH-----HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH
T ss_conf 99999999999999999-----883106099998499986999999999999987051------5766999999999999
Q ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 641024444421022113454333103424578744
Q gi|254780865|r 437 TSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMR 472 (666)
Q Consensus 437 ~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~ 472 (666)
T Consensus 270 ~~~~~-~la~i~il~Slisl~yYLRl~y~~~l~~~p 304 (350)
T MTH00041 270 QNNSI-LLSIILIIGSLLSLFFYLRISFNSSLILFP 304 (350)
T ss_pred HCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 80839-999999999999999999999999986899