HHsearch alignment for GI: 254780865 and conserved domain: MTH00066

>MTH00066 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00  E-value=0  Score=893.39  Aligned_cols=564  Identities=34%  Similarity=0.548  Sum_probs=499.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99999999999999999999725898528999753101308822357787433789999999999999999974753068
Q gi|254780865|r   33 IFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHDD  112 (666)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~~  112 (666)
T Consensus        32 ~~~~~~v~~af~~slipl~~~~~~~~~~~--~~~~~w~~~~~~~~~~~f~~D~~S~~f~~vv~~Is~~V~~yS~~YM~~d  109 (598)
T MTH00066         32 TIVKTSVKTAFFISLIPLMIFINQGLESI--TTNFHWMSINNFNINSSFKFDQYSILFLPIALFVTWSILEFAIWYMHSD  109 (598)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCCEE--EEEEECCEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             99999999999999999999981798625--7752540247736177753286289999999999999999978970789


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH
Q ss_conf             88661899999999999999986558999988888856889988762034454103630002212247899999999999
Q gi|254780865|r  113 PHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIY  192 (666)
Q Consensus       113 ~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~  192 (666)
T Consensus       110 ~~~~rF~~~l~lF~~sMl~lv~s~Nl~~lfigWEgvgl~SylLI~~~~~~~~a~~aa~~a~l~nriGd~~lll~i~~l~~  189 (598)
T MTH00066        110 PKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARSDANTAALQAVLYNRVGDIGLILSMAWLAM  189 (598)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             98148999999999999999998059999999999999999999887497678999999999997759999999999999


Q ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
Q ss_conf             96205989999875431000124555566666666532024553179999999999986543343234312400002332
Q gi|254780865|r  193 LFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTP  272 (666)
Q Consensus       193 ~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPtp  272 (666)
T Consensus       190 ~~gs~~~~~~~~~~~------------------------------~~~~~~l~lilaa~~KSAQfP~h~WLP~AMeaPTP  239 (598)
T MTH00066        190 NTNSWELQQIFLLYD------------------------------NSTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTP  239 (598)
T ss_pred             HCCCCCHHHHHHHCC------------------------------HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
T ss_conf             839810999987464------------------------------06999999999998743318670422666148996


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             21000134566667779999630135781344445677777887630011102452024432100013533445655311
Q gi|254780865|r  273 VSALIHAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAY  352 (666)
Q Consensus       273 vSAllhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~  352 (666)
T Consensus       240 VSALlHSsTmV~AGVylLiR~~~~~~~~~~~~~~~l~lG~lT~l~a~~~Al~Q~DiKkilAyST~SQLG~M~~~iglg~~  319 (598)
T MTH00066        240 VSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP  319 (598)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             02333125898850889899887874169999999999999999999999863218899998999899999999872519


Q ss_pred             CCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             10034655531000122221012321110000110127761546699999998864210110000000024432178888
Q gi|254780865|r  353 GASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIIL  432 (666)
Q Consensus       353 ~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il  432 (666)
T Consensus       320 ~lA~fHl~~HA~FKAlLFL~aG~iIh~~~~~qDir~mGgl~~~mP~T~~~~~ig~laL~G~P------flsGF~SKD~Il  393 (598)
T MTH00066        320 QLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQNMLPMTTSCLTIGSLALTGTP------FLAGFFSKDAII  393 (598)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHH
T ss_conf             89999999999999999983048986357713598808988776699999999999996440------432887589999


Q ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             88986410244444210221134543331034245787443321000000135533320245656663210000012467
Q gi|254780865|r  433 EVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVFFG  512 (666)
Q Consensus       433 ~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~~~  512 (666)
T Consensus       394 e~~~~~~~n~~~~~~~~~~~~lT~~Ys~Rl~~~~~~~~~~~~--~~~~~~E~~~~m~~pl~~La~gsI~~G~~~~~~~~p  471 (598)
T MTH00066        394 EAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSL--PLSPINENNKLIINPIKRLAWGSIIAGLLIINNILP  471 (598)
T ss_pred             HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             998857458999999999999999999999999964899888--777878896789999999999999999999998756


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCHHHHH
Q ss_conf             64211345543357533320123368899999999999999999999987040124665641125899987057816899
Q gi|254780865|r  513 SAYSSFWKGALFASSSNNVLERYHEVPLWVEYSSFIAFFVGFFSAFLMYIICPSLPKFLSEKCRFFYCFLQNAWYFDRIY  592 (666)
Q Consensus       513 ~~~~~~~~~~l~~~~~~~~l~~~~~~~l~~~~i~ll~~iiGi~la~lly~~~~~~~~~~~~~~~~l~~~l~~~~y~d~lY  592 (666)
T Consensus       472 ~~~------------------~~~~~p~~~Kl~~l~~~~~G~~~~~~l~~~~~~~~-----~~~~~~~f~~~~~f~~~~~  528 (598)
T MTH00066        472 MKT------------------QILTMPTIMKLSALLVTILGLIIAMDLAKITSKTT-----PKTKMHSFSNLLAFFPTII  528 (598)
T ss_pred             CCC------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----CCCHHHHHHHHHHHHHHHH
T ss_conf             896------------------25132399999999999999999999999860256-----5205889971367789889


Q ss_pred             HHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999-998755-7665341549999999999998850962889999999999999999
Q gi|254780865|r  593 DCLLVRPIVRLATIL-WKRVDL-SIDKYGPGGIVACVRYLSSYSSRLQTGYLDHYAFSMLIGISILVIV  659 (666)
Q Consensus       593 ~~~ivk~~~~ls~~l-~~~~D~-~i~d~~v~gi~~~v~~~s~~lr~lQtG~i~~Yi~~i~igl~llli~  659 (666)
T Consensus       529 ~~~~~~~~l~~~~~~~~~~~D~gw~E~~Gp~gi~~~~~~~s~~~~~~q~g~ik~Yl~~f~i~~~~~l~~  597 (598)
T MTH00066        529 HRLSPKTNLNLGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLIL  597 (598)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             998899999999999999887002997715789999999999999998658999999999999999997