HHsearch alignment for GI: 254780865 and conserved domain: MTH00066
>MTH00066 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=893.39 Aligned_cols=564 Identities=34% Similarity=0.548 Sum_probs=499.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 99999999999999999999725898528999753101308822357787433789999999999999999974753068
Q gi|254780865|r 33 IFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHDD 112 (666)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~~ 112 (666)
T Consensus 32 ~~~~~~v~~af~~slipl~~~~~~~~~~~--~~~~~w~~~~~~~~~~~f~~D~~S~~f~~vv~~Is~~V~~yS~~YM~~d 109 (598)
T MTH00066 32 TIVKTSVKTAFFISLIPLMIFINQGLESI--TTNFHWMSINNFNINSSFKFDQYSILFLPIALFVTWSILEFAIWYMHSD 109 (598)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCEE--EEEEECCEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999981798625--7752540247736177753286289999999999999999978970789
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHH
Q ss_conf 88661899999999999999986558999988888856889988762034454103630002212247899999999999
Q gi|254780865|r 113 PHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIY 192 (666)
Q Consensus 113 ~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~ 192 (666)
T Consensus 110 ~~~~rF~~~l~lF~~sMl~lv~s~Nl~~lfigWEgvgl~SylLI~~~~~~~~a~~aa~~a~l~nriGd~~lll~i~~l~~ 189 (598)
T MTH00066 110 PKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARSDANTAALQAVLYNRVGDIGLILSMAWLAM 189 (598)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98148999999999999999998059999999999999999999887497678999999999997759999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCC
Q ss_conf 96205989999875431000124555566666666532024553179999999999986543343234312400002332
Q gi|254780865|r 193 LFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTP 272 (666)
Q Consensus 193 ~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPtp 272 (666)
T Consensus 190 ~~gs~~~~~~~~~~~------------------------------~~~~~~l~lilaa~~KSAQfP~h~WLP~AMeaPTP 239 (598)
T MTH00066 190 NTNSWELQQIFLLYD------------------------------NSTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTP 239 (598)
T ss_pred HCCCCCHHHHHHHCC------------------------------HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC
T ss_conf 839810999987464------------------------------06999999999998743318670422666148996
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 21000134566667779999630135781344445677777887630011102452024432100013533445655311
Q gi|254780865|r 273 VSALIHAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAY 352 (666)
Q Consensus 273 vSAllhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~ 352 (666)
T Consensus 240 VSALlHSsTmV~AGVylLiR~~~~~~~~~~~~~~~l~lG~lT~l~a~~~Al~Q~DiKkilAyST~SQLG~M~~~iglg~~ 319 (598)
T MTH00066 240 VSALLHSSTMVVAGIFLLIRFHPLLENNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQP 319 (598)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf 02333125898850889899887874169999999999999999999999863218899998999899999999872519
Q ss_pred CCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 10034655531000122221012321110000110127761546699999998864210110000000024432178888
Q gi|254780865|r 353 GASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIIL 432 (666)
Q Consensus 353 ~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il 432 (666)
T Consensus 320 ~lA~fHl~~HA~FKAlLFL~aG~iIh~~~~~qDir~mGgl~~~mP~T~~~~~ig~laL~G~P------flsGF~SKD~Il 393 (598)
T MTH00066 320 QLAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLQNMLPMTTSCLTIGSLALTGTP------FLAGFFSKDAII 393 (598)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHH
T ss_conf 89999999999999999983048986357713598808988776699999999999996440------432887589999
Q ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 88986410244444210221134543331034245787443321000000135533320245656663210000012467
Q gi|254780865|r 433 EVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVFFG 512 (666)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~~~ 512 (666)
T Consensus 394 e~~~~~~~n~~~~~~~~~~~~lT~~Ys~Rl~~~~~~~~~~~~--~~~~~~E~~~~m~~pl~~La~gsI~~G~~~~~~~~p 471 (598)
T MTH00066 394 EAMNTSNLNSWALILTLIATSFTAVYSFRIIYFSSMKFPRSL--PLSPINENNKLIINPIKRLAWGSIIAGLLIINNILP 471 (598)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 998857458999999999999999999999999964899888--777878896789999999999999999999998756
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCHHHHH
Q ss_conf 64211345543357533320123368899999999999999999999987040124665641125899987057816899
Q gi|254780865|r 513 SAYSSFWKGALFASSSNNVLERYHEVPLWVEYSSFIAFFVGFFSAFLMYIICPSLPKFLSEKCRFFYCFLQNAWYFDRIY 592 (666)
Q Consensus 513 ~~~~~~~~~~l~~~~~~~~l~~~~~~~l~~~~i~ll~~iiGi~la~lly~~~~~~~~~~~~~~~~l~~~l~~~~y~d~lY 592 (666)
T Consensus 472 ~~~------------------~~~~~p~~~Kl~~l~~~~~G~~~~~~l~~~~~~~~-----~~~~~~~f~~~~~f~~~~~ 528 (598)
T MTH00066 472 MKT------------------QILTMPTIMKLSALLVTILGLIIAMDLAKITSKTT-----PKTKMHSFSNLLAFFPTII 528 (598)
T ss_pred CCC------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-----CCCHHHHHHHHHHHHHHHH
T ss_conf 896------------------25132399999999999999999999999860256-----5205889971367789889
Q ss_pred HHHHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999-998755-7665341549999999999998850962889999999999999999
Q gi|254780865|r 593 DCLLVRPIVRLATIL-WKRVDL-SIDKYGPGGIVACVRYLSSYSSRLQTGYLDHYAFSMLIGISILVIV 659 (666)
Q Consensus 593 ~~~ivk~~~~ls~~l-~~~~D~-~i~d~~v~gi~~~v~~~s~~lr~lQtG~i~~Yi~~i~igl~llli~ 659 (666)
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~D~gw~E~~Gp~gi~~~~~~~s~~~~~~q~g~ik~Yl~~f~i~~~~~l~~ 597 (598)
T MTH00066 529 HRLSPKTNLNLGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNIQTGLIKTYLTLFLITLLLMLIL 597 (598)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 998899999999999999887002997715789999999999999998658999999999999999997