HHsearch alignment for GI: 254780865 and conserved domain: MTH00068
>MTH00068 ND4 NADH dehydrogenase subunit 4; Provisional.
Probab=100.00 E-value=0 Score=575.41 Aligned_cols=391 Identities=17% Similarity=0.267 Sum_probs=327.3
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78743378999999999999999997475306888-6-618999999999999999865589999888888568899887
Q gi|254780865|r 80 GLRIDTLSSVMFVVVNSISAVVHIYSIGYMHDDPH-R-PRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIG 157 (666)
Q Consensus 80 ~~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~~~~-~-~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~ 157 (666)
T Consensus 55 ~~gvD~lS~~li~Lt~~l~~l~ilaS~~~~~~~~~~r~~~f~~l~l~l~~~l~~~F~s~dl~lFyiffE~~LIp~~~LI~ 134 (458)
T MTH00068 55 YLGIDQISSPLLILTCWLLPLMILASQNHLKNNPLNRQRMYISMLIILQLTLILAFSATELILFYIAFEATLIPTLIIIT 134 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88017868999999999999999995799841852038899999999999999999996899999999999999999999
Q ss_pred HHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 62034454103630002212247899999999999962059899998754310001245555666666665320245531
Q gi|254780865|r 158 FWSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHD 237 (666)
Q Consensus 158 ~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (666)
T Consensus 135 ~wG~~~~r~~A~~~~~~yT~~gSl~lL~~i~~ly~~~gs~~~~~~~~~~~~~------------------------~~~~ 190 (458)
T MTH00068 135 RWGNQAERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLTLLELMPPMQ------------------------LMTY 190 (458)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH------------------------HHHH
T ss_conf 8699768999999999999999999999999999975997399999988775------------------------4367
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHH
Q ss_conf 799999999999865433432343124000-0233221000134566667779999630135-78134444567777788
Q gi|254780865|r 238 SIAIICLLFFLGAMGKSAQLLLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMSPLFE-LSPFVLDCITVLGCITA 315 (666)
Q Consensus 238 ~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~-~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~~-~~~~~~~~~~~~g~~t~ 315 (666)
T Consensus 191 ~~~~~~~~~llaF~vK~p~~p~H~WLP~Ah~eAP~~~S~il-agvllK~G~YgliR~~~~~~~~~~~~~~~~~~l~~~~~ 269 (458)
T MTH00068 191 TNKIWWLACLLAFMVKMPLYGLHLWLPKAHVEAPIAGSMIL-AAVLLKLGGYGILRISIMLTPLSKELSYPFIILALWGV 269 (458)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCHHHHHH-HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999976788888666165445980789999-99999998999999975144258999999999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 76300111024520244321000135334456553---111003465553100012222101232111000011012776
Q gi|254780865|r 316 FFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCR---AYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGL 392 (666)
Q Consensus 316 ~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~---~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl 392 (666)
T Consensus 270 ~~~~~~al~Q~DlKrliAYSSvshmG~i~~gi~~~~~~g~~Gal~~mi~Hgl~ss~LF~l~g~-~y~r~~tr~i~~~~Gl 348 (458)
T MTH00068 270 LMTSLICMRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSFSGAIILMISHGLTSSALFCLANT-NYERTHSRTLLLLRGA 348 (458)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCEEHHHHCCH
T ss_conf 999999998236669999987999999999999737688999999999999999999999999-9970486248884895
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 15466999999988642101100000000244321788888898641024444421022113454333103424578744
Q gi|254780865|r 393 YPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMR 472 (666)
Q Consensus 393 ~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~ 472 (666)
T Consensus 349 ~~~~P~~~~~~~i~~la~~g~P------p~~gF~gE~~il~~~~~~~~--~~~~~~~~~~~lsa~YsL~l~~~~~~G~~~ 420 (458)
T MTH00068 349 QTILPLMATWWLLINLSNMALP------PSPNLWGELTIMVSLFNWSN--WTILITGLGTLITAAYTLYMFLMTQRGPLP 420 (458)
T ss_pred HHHHHHHHHHHHHHHHHHCCCC------CCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 5554899999999999971788------75648999999999999849--999999999999999999999999769981
Q ss_pred CCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 33210000001355333202456566632100000
Q gi|254780865|r 473 VDKDISHKIHESPLVMQIPLFILAIGSIFFGFIFH 507 (666)
Q Consensus 473 ~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~ 507 (666)
T Consensus 421 ~~~~---~~~~~~~rE~~ll~lh~~pl~~l~~~p~ 452 (458)
T MTH00068 421 NHLK---TLFPTYTREHLLLALHILPMLLLILKPE 452 (458)
T ss_pred HHCC---CCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5201---5899718999999999999999998399