HHsearch alignment for GI: 254780865 and conserved domain: MTH00091
>MTH00091 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=98.08 E-value=9.6e-06 Score=52.97 Aligned_cols=213 Identities=15% Similarity=0.145 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99998655899998888885688998876203445410363000221224789999999999996205989999875431
Q gi|254780865|r 130 LVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHY 209 (666)
Q Consensus 130 ~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~ 209 (666)
T Consensus 5 ~l~~~~~N~~~WWs~fl~mtl~fv~L~k----~~~~~~s~~nYfv~Qe~~gl~FLl~~~~-~------------------ 61 (273)
T MTH00091 5 LLNFFSLNIIVWWSVFLLMTLLFVFLNK----GMKSYSSLLNYFVWQESLGLFFLVFNLN-F------------------ 61 (273)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHH----CCHHHHHHHHHHHHHHHHHHHHHHHHHH-H------------------
T ss_conf 9999981799999999999999999986----2306899999999999999999999999-9------------------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 00012455556666666653202455317999999999998654334323431240000233221000134566667779
Q gi|254780865|r 210 WKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFL 289 (666)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAllhs~~mv~~Gvy~ 289 (666)
T Consensus 62 -----------------------------------~~~~ilmmK~G~aPFHfW~~~v~~~l~~~~------------~~~ 94 (273)
T MTH00091 62 -----------------------------------FQFFFLMMKMGVAPFHFWVFSVTNGLSGWS------------LMW 94 (273)
T ss_pred -----------------------------------HHHHHHHHHHCCCCHHHHHHHHHHHHHHHH------------HHH
T ss_conf -----------------------------------999999999179718989999998735889------------999
Q ss_pred HH---HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCH
Q ss_conf 99---963013578134444567777788763001110245202443210001353344565531110034655531000
Q gi|254780865|r 290 VA---RMSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYGASIFHLFTHAFFK 366 (666)
Q Consensus 290 l~---r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~~~a~~~~~~H~~~k 366 (666)
T Consensus 95 flT~qKLp~l~il~~~~~~~~~~~lif~~~i~~~~~~~~ks~k~ll~~SS~~sf~Wmi~~~~~S~~~~~~yf~~Y-~--- 170 (273)
T MTH00091 95 FLTFQKLPFLFVLLQIMDNFFFFLLFFGIILCYLQMFVLKSYKNLLIISSTESFNWMILSFFFSLKNVFVLFLYY-F--- 170 (273)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H---
T ss_conf 999989879999999999999999999999999999999999999999986348899999999999999999999-9---
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 1222210123211100001101277615466999999988642101100000000244321788888898641
Q gi|254780865|r 367 ALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSS 439 (666)
Q Consensus 367 a~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~ 439 (666)
T Consensus 171 ~l~~~----li~~~~~~~~~-------~---~---~~~e~iL~f~nlP------p~~~Ff~Ki~il~~~~~~~ 220 (273)
T MTH00091 171 FLMFM----LIPYFSSNKEL-------N---F---FNWETILVFFNLP------PSVTFFIKIFSLSEIFKLD 220 (273)
T ss_pred HHHHH----HHHHHHCCCHH-------H---H---HHHHHHHHHHCCC------CHHHHHHHHHHHHHHHHHH
T ss_conf 99999----99998112027-------8---9---9999999995799------4543999999999999999