HHsearch alignment for GI: 254780865 and conserved domain: MTH00165
>MTH00165 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=840.58 Aligned_cols=536 Identities=32% Similarity=0.545 Sum_probs=475.6
Q ss_pred EEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 31013088223577874337899999999999999999747530688866189999999999999998655899998888
Q gi|254780865|r 67 FPWIIFDGLDIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWE 146 (666)
Q Consensus 67 ~~wi~~~~~~~~~~~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE 146 (666)
T Consensus 34 ~~~~~~~~~~~~~~~~~D~~S~~f~~~v~~Is~~V~~yS~~YM~~d~~~~rF~~~l~lFv~sM~~lv~s~nl~~l~lgWE 113 (571)
T MTH00165 34 WELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISILLGWD 113 (571)
T ss_pred EEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44201267063887734852899999999999999999889837999842899999999999999999804999999999
Q ss_pred HHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88568899887620344541036300022122478999999999999620598999987543100012455556666666
Q gi|254780865|r 147 GVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSF 226 (666)
Q Consensus 147 ~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (666)
T Consensus 114 glGl~SylLI~fy-~~~~s~~a~~~t~l~nRiGD~~ll~~i~~~~-~~gs~~~~~~~~~~-------------------- 171 (571)
T MTH00165 114 GLGLVSYCLVIYY-QNVKSYNAGMLTALSNRIGDVAILLSIAWML-NFGSWNFIFYLDSM-------------------- 171 (571)
T ss_pred HHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCHHHHHHHHH--------------------
T ss_conf 9999999998136-8868999999999999876999999999999-95772699998763--------------------
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 65320245531799999999999865433432343124000023322100013456666777999963013578134444
Q gi|254780865|r 227 SFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVARMSPLFELSPFVLDC 306 (666)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAllhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~ 306 (666)
T Consensus 172 -------~~~~~~~~~~~ll~laa~~KSAQ~Pfh~WLP~AM~aPTPVSALvHssTlVtAGvylliR~~~~~~~~-~~~~~ 243 (571)
T MTH00165 172 -------SNSFEMLLIGFLIILAAMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNPLLSGS-FFSKL 243 (571)
T ss_pred -------CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHH
T ss_conf -------0330899999999999988732177622116764589728999987689988899999988985216-89999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 56777778876300111024520244321000135334456553111003465553100012222101232111000011
Q gi|254780865|r 307 ITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDM 386 (666)
Q Consensus 307 ~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i 386 (666)
T Consensus 244 l~~ig~~T~l~a~~~Al~q~DiKkiiAyST~SQlG~M~~~~glg~~~la~fHl~~HA~fKAlLFl~aG~vIh~~~~~qDi 323 (571)
T MTH00165 244 LLLISSLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSLGFYKLAFFHLLTHALFKALLFMCAGVIIHSMGGSQDI 323 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 99999999999999999764077898987898999999999805599999999999999999998332999972797308
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 01277615466999999988642101100000000244321788888898641024444421022113454333103424
Q gi|254780865|r 387 RRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLT 466 (666)
Q Consensus 387 ~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~v 466 (666)
T Consensus 324 r~mggl~~~~P~t~~~~~i~~lsL~G~P------flsGFySKD~IlE~~~~~~~~~~~~~~~~~~~~lT~~YS~Rl~~~~ 397 (571)
T MTH00165 324 RFMGGLSKSMPLTSSCFNVSNLALCGFP------FLAGFYSKDLILEMVFMSNLNMFSFLLFIFSTGLTVSYSFRLMYYS 397 (571)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHCCH------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8866965424699999999999985350------5418988899999998744559999999999997899999999999
Q ss_pred CCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 57874433210000001355333202456566632100000124676421134554335753332012336889999999
Q gi|254780865|r 467 FFGKMRVDKDISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVFFGSAYSSFWKGALFASSSNNVLERYHEVPLWVEYSS 546 (666)
Q Consensus 467 F~G~~~~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~l~~~~i~ 546 (666)
T Consensus 398 ~~~~~~~~--~~~~~~~~~~~m~~pl~~L~~~si~~G~~~~~~~~~~~-------------------~~~~l~~~~K~l~ 456 (571)
T MTH00165 398 MTGDFNLS--SLNNLSDESYIMLKSMILLLFMSIFGGSFLSWLIFPNP-------------------YMICLPFYLKLLT 456 (571)
T ss_pred HHCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------CHHHHHHHHHHHH
T ss_conf 81899898--78618889898999999999999999999999982656-------------------2215329999999
Q ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 99999999999999870401246656411258999870578168999999999999999999987557-66534154999
Q gi|254780865|r 547 FIAFFVGFFSAFLMYIICPSLPKFLSEKCRFFYCFLQNAWYFDRIYDCLLVRPIVRLATILWKRVDLS-IDKYGPGGIVA 625 (666)
Q Consensus 547 ll~~iiGi~la~lly~~~~~~~~~~~~~~~~l~~~l~~~~y~d~lY~~~ivk~~~~ls~~l~~~~D~~-i~d~~v~gi~~ 625 (666)
T Consensus 457 ~~~~~~g~~l~~~~~~~~~~~~-~~~~~~~~~~~f~~~mwfl~~l~~~~~~~~~~~~~~~~~k~~D~gw~E~~g~~Gi~~ 535 (571)
T MTH00165 457 LFVILLGGLLGYLLSLFSLSFL-LKSLNYYKLSSFLGSMWFMPFLSTYGISYLPLNLGYSSFKNFDQGWSEYFGGQGLYN 535 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999987335-454566799999997446398888788899999999999999976999862569999
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999988509628899999999999999999
Q gi|254780865|r 626 CVRYLSSYSSRLQTGYLDHYAFSMLIGISILVIVM 660 (666)
Q Consensus 626 ~v~~~s~~lr~lQtG~i~~Yi~~i~igl~llli~~ 660 (666)
T Consensus 536 ~~~~~s~~~~~~q~~~i~~Y~~~~~~~~~~~~~~l 570 (571)
T MTH00165 536 SLKKLSKFLQWLQMNNLKIYLLSFLLWIIILFLLL 570 (571)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999985789999999999999999997