HHsearch alignment for GI: 254780865 and conserved domain: MTH00197
>MTH00197 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=343.27 Aligned_cols=296 Identities=17% Similarity=0.212 Sum_probs=243.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 61899999999999999986558999988888856889988762034454103630002212247899999999999962
Q gi|254780865|r 116 PRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFH 195 (666)
Q Consensus 116 ~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~g 195 (666)
T Consensus 2 P~~~~~~l~~~~g~l~~vsS~n~~~~wvglEl~~l~~~~li~~~-~~~~s~ea~~KYFiiq~~gS~~~L~g~~l~~~~~~ 80 (325)
T MTH00197 2 PSSFFFYIFMVGGVLLSLSSSNWFLVWVGLEMNLICFIPLLSQA-KSLSEIESAFKYFLFQEVGSYLVLVGGLLSFLPLP 80 (325)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999999999999869-99318999999999999999999999999999986
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC
Q ss_conf 05989999875431000124555566666666532024553179999999999986543343234312400002332210
Q gi|254780865|r 196 SVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSA 275 (666)
Q Consensus 196 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSA 275 (666)
T Consensus 81 ~~~~~-----------------------------------------~~~li~~gl~~KlG~~PfH~W~p~v~~~~~~~~~ 119 (325)
T MTH00197 81 LETLG-----------------------------------------WGALVISGLSVKLGVAPFHFWVPPVVSSVSWFNC 119 (325)
T ss_pred HHHHH-----------------------------------------HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHH
T ss_conf 38999-----------------------------------------9999999999985765301044788767719999
Q ss_pred CHHHHHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 00134566667779999-63013578134444567777788763001110245202443210001353344565531110
Q gi|254780865|r 276 LIHAATMVTAGVFLVAR-MSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYGA 354 (666)
Q Consensus 276 llhs~~mv~~Gvy~l~r-~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~~~ 354 (666)
T Consensus 120 ~l-l~t~~Ki~pl~il~~~~~-------~~~~l~~~~~lS~~~G~i~al~Q~~iKrlLAYSSI~h~G~~l~~~~~~~-~~ 190 (325)
T MTH00197 120 FL-LLVWQKLAPLFILASLSS-------SKIGLSWCGVTSVLWGAIGMMGQSNIRQILAYSSINQTGWMLSVIVYSP-SI 190 (325)
T ss_pred HH-HHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HH
T ss_conf 99-999999999999999543-------3689999999999998764034044029999988988999999999859-99
Q ss_pred HHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 03465553100012222101232111000011012776154669999999886421011000000002443217888888
Q gi|254780865|r 355 SIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEV 434 (666)
Q Consensus 355 a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~ 434 (666)
T Consensus 191 ~~~y~~~Y~~~~~~~~~~----l~-~~~~~~~~~~~~l~~~~~~~~~~~~l~~lSLaGiP------Pf~GF~~K~~ii~~ 259 (325)
T MTH00197 191 LPFYFLIYFTIMVALLLF----LS-QMNFYASFSQKNVPDTMSWGLMLLGLSLLSLSGFP------PLVGFFPKWLSVEV 259 (325)
T ss_pred HHHHHHHHHHHHHHHHHH----HH-HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHHH
T ss_conf 999999999999999999----99-98770898987266536999999999999986304------38669999999999
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 9864102444442102211345433310342457874433
Q gi|254780865|r 435 AYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVD 474 (666)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~ 474 (666)
T Consensus 260 ~i~~~~~-~l~~i~ll~S~isl~yYLrl~~~~~~~~~~~~ 298 (325)
T MTH00197 260 LLSSGSS-LLTFLVMIASCFSLYAYISLGYKILNWAKNVL 298 (325)
T ss_pred HHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 9982839-99999999999999999999999998098764