HHsearch alignment for GI: 254780865 and conserved domain: MTH00208
>MTH00208 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=883.66 Aligned_cols=571 Identities=36% Similarity=0.571 Sum_probs=504.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999972589852899975310130882235778743378999999999999999997475306
Q gi|254780865|r 32 DIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHD 111 (666)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~ 111 (666)
T Consensus 57 ~~~~~~~~k~~~~~sl~pl~~~~~~g~~-~~~~~~~~W~~~~~f~i~~sf~~D~~S~~F~~vvl~Vs~sI~~fS~~YM~~ 135 (631)
T MTH00208 57 GPFSISILKSLAFLSLIPLFLYISLGCP-EINITLSNWLSNNGFSFSLSFIFDFYFNLFFSVALIVTWSIIEFSHYYMSN 135 (631)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCC-CEEEEHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 6109999999999999999999818985-241207577623881506312169429999999999999999996787008
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHH
Q ss_conf 88866189999999999999998655899998888885688998876203445410363000221224789999999999
Q gi|254780865|r 112 DPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAII 191 (666)
Q Consensus 112 ~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~ 191 (666)
T Consensus 136 Dp~~~rF~~~l~lF~~sM~~Lv~s~Nl~~lfiGWeGvGl~SflLI~~w~~r~~a~~aal~a~l~NRiGD~glll~~~~~~ 215 (631)
T MTH00208 136 DPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRSDANSSALQAVIYNRIGDIGLLLFFSLSL 215 (631)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99921699999999999999999713999999999999999896766479589999999999999887999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
Q ss_conf 99620598999987543100012455556666666653202455317999999999998654334323431240000233
Q gi|254780865|r 192 YLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPT 271 (666)
Q Consensus 192 ~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPt 271 (666)
T Consensus 216 ~~~~s~~~~~~~~~~~~--------------------------~~~~~~~~~~~l~laa~~KSAQfplh~WLP~AMegPT 269 (631)
T MTH00208 216 LNFNSWNLSEILLINNN--------------------------NSFLINLLLFGLLLAAAGKSAQFGLHPWLPAAMEGPT 269 (631)
T ss_pred HHHCCCHHHHHHHHHCC--------------------------CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
T ss_conf 99588129999987055--------------------------3048999999999999865230757421056646998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 22100013456666777999963013578134444567777788763001110245202443210001353344565531
Q gi|254780865|r 272 PVSALIHAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRA 351 (666)
Q Consensus 272 pvSAllhs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~ 351 (666)
T Consensus 270 PVSALlHssTmVtAGVyLliR~~p~~~~~~~~~~~~l~iG~~T~l~a~~~Al~q~DiKkIiA~ST~SQLG~M~~~iglg~ 349 (631)
T MTH00208 270 PVSALLHSSTMVVAGVFLLIRTSPLYSNSPFFNSWCLILGGITALFAASTAISQHDIKKIVAYSTTSQLGLMVVAIGLGQ 349 (631)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
T ss_conf 18888856578762166642107514300999999999999999999999999987887874110307899999997130
Q ss_pred CCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 11003465553100012222101232111000011012776154669999999886421011000000002443217888
Q gi|254780865|r 352 YGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDII 431 (666)
Q Consensus 352 ~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~i 431 (666)
T Consensus 350 ~~la~fHl~tHA~FKAlLFLcaGsiIH~~~~~QDiRkMGgl~~~~P~t~~~~~igslaL~G~P------flsGFySKD~I 423 (631)
T MTH00208 350 PIIAFFHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLSFLLPVTSACIILGSLALSGTP------FLAGFYSKDLI 423 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC------HHHHHCCHHHH
T ss_conf 889999999999999999982338998268744799867986427399999999999982862------22115037999
Q ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 88898641024444421022113454333103424578744332100000013553332024565666321000001246
Q gi|254780865|r 432 LEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVFF 511 (666)
Q Consensus 432 l~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~~ 511 (666)
T Consensus 424 iE~~~~s~~n~~~~~l~liat~lTa~YS~Rlif~~f~g~~~~~~--~~~i~E~~~~m~~Pl~~La~gSI~~G~l~s~~~~ 501 (631)
T MTH00208 424 LEAGLASLSNFLGIILAFLATLLTAVYSFRIIFFCFSLPPSFSP--LSPISEENNNLTNALNRLALGTIISGWFFSNFVF 501 (631)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999751079999999999999999999999987447898874--1117779898999999999999999999999871
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCHHHH
Q ss_conf 76421134554335753332012336889999999999999999999998704012466564112589998705781689
Q gi|254780865|r 512 GSAYSSFWKGALFASSSNNVLERYHEVPLWVEYSSFIAFFVGFFSAFLMYIICPSLPKFLSEKCRFFYCFLQNAWYFDRI 591 (666)
Q Consensus 512 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~l~~~~i~ll~~iiGi~la~lly~~~~~~~~~~~~~~~~l~~~l~~~~y~d~l 591 (666)
T Consensus 502 ~~--------------------~~~~~p~~~K~~~l~v~i~G~~~~~~l~~~~~~~-----~~~~~~~~f~~~~~ff~~~ 556 (631)
T MTH00208 502 PP--------------------PSFTLPLVLKILALLVTILGIALSFSSLISLSSN-----LISSTLYNFLSNQWFFVNI 556 (631)
T ss_pred CC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHHHHH
T ss_conf 73--------------------0437759999999999999999999999998746-----5642899999881664988
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999-9998755-7665341549999999999998850962889999999999999999998
Q gi|254780865|r 592 YDCLLVRPIVRLATI-LWKRVDL-SIDKYGPGGIVACVRYLSSYSSRLQTGYLDHYAFSMLIGISILVIVMLL 662 (666)
Q Consensus 592 Y~~~ivk~~~~ls~~-l~~~~D~-~i~d~~v~gi~~~v~~~s~~lr~lQtG~i~~Yi~~i~igl~llli~~ll 662 (666)
T Consensus 557 ~~~~~~~~~l~~~~~~~~~~~D~gW~E~~Gp~Gi~~~~~~ls~~~~~~Q~G~Ik~Yl~~fll~~~lil~l~l~ 629 (631)
T MTH00208 557 SHSILTLFSFFSSLFGSTRTLDRGWTENLGPQGIAYTSSSLSKSYQLSQTGYIKQYILFSILSFLIIFTLSLL 629 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8889999999999999999999868999838999999999999999987182999999999999999999999