HHsearch alignment for GI: 254780865 and conserved domain: MTH00211
>MTH00211 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=895.99 Aligned_cols=562 Identities=38% Similarity=0.597 Sum_probs=496.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
Q ss_conf 99999999999999972589852899975310130882235778743378999999999999999997475306888661
Q gi|254780865|r 38 LMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPR 117 (666)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~ 117 (666)
T Consensus 31 ~vk~~f~~sl~pl~~~~~~~~~~~~--~~~~w~~~~~~~i~~~~~~D~~S~~f~~~v~~is~~V~~yS~~YM~~d~~~~r 108 (595)
T MTH00211 31 AVKISFFISLIPLFIFLDQEMESLL--TGWEWLNLGGFSLNLSFRYDFYSIFFFVVALYVTWSILEFSLWYMSTDPNVNR 108 (595)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEE--EEEECCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 9999999999999999947997578--86151144884727651158308999999999999999996887378999578
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 89999999999999998655899998888885688998876203445410363000221224789999999999996205
Q gi|254780865|r 118 FFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILAISAIIYLFHSV 197 (666)
Q Consensus 118 f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~ 197 (666)
T Consensus 109 F~~~l~lF~~sMl~Lv~s~Nl~~l~igWEgvgl~SylLI~~~~~r~~a~~aa~~a~i~nriGd~~lll~i~~l~~~~~s~ 188 (595)
T MTH00211 109 FFKYLLLFLISMLILVSANNLFQLLIGWEGVGIMSFLLISWWYGRSDANTAALQAIIYNRIGDIGLILSMFWLLMNLNSW 188 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999999999836999999999999999998923189589999999999999389999999999999992772
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCH
Q ss_conf 98999987543100012455556666666653202455317999999999998654334323431240000233221000
Q gi|254780865|r 198 DFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALI 277 (666)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~~aPtpvSAll 277 (666)
T Consensus 189 ~~~~i~~~-----------------------------~~~~~~~~~~~l~laa~~KSAQfPlh~WLP~AM~aPTPVSALl 239 (595)
T MTH00211 189 TMQQLFIL-----------------------------SDMVNTLPLLGFLLAAMGKSAQFGLHPWLPAAMEGPTPVSALL 239 (595)
T ss_pred HHHHHHHH-----------------------------CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHH
T ss_conf 49999863-----------------------------6438899999999999987431657254587606999289999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 13456666777999963013578134444567777788763001110245202443210001353344565531110034
Q gi|254780865|r 278 HAATMVTAGVFLVARMSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYGASIF 357 (666)
Q Consensus 278 hs~~mv~~Gvy~l~r~~~~~~~~~~~~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~~~~~a~~ 357 (666)
T Consensus 240 HsstmV~AGvylliR~~~~~~~~~~~~~~~l~lG~lT~l~a~~~Al~q~DiKkilAyST~SQlG~M~~aiglg~~~~a~f 319 (595)
T MTH00211 240 HSSTMVVAGVFLLIRLSPLILNNFLVLGAVLCLGALTTLFAALCALTQNDMKKIVAFSTTSQLGLMVVALGLGQPQLAFL 319 (595)
T ss_pred HHHHHHHCCHHHEECCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 87589980631001105274417899999999999999999999987777878887426988889999987658999999
Q ss_pred HHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 65553100012222101232111000011012776154669999999886421011000000002443217888888986
Q gi|254780865|r 358 HLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYT 437 (666)
Q Consensus 358 ~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl~~~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~ 437 (666)
T Consensus 320 Hl~~HA~fKalLFL~aG~iIh~~~~~qDir~mGgl~~~mP~t~~~~~ig~lsL~G~P------~lsGF~SKD~IlE~~~~ 393 (595)
T MTH00211 320 HICTHAFFKAMLFLCSGSIIHSLNNEQDIRKMGGLSKALPFTSSCLIIGSLALMGFP------FLAGFFSKDSILENMNM 393 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC------CCCHHHHHHHHHHHHHH
T ss_conf 999789999999983128877447713798707988763899999999999984676------00225116899999986
Q ss_pred HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 41024444421022113454333103424578744332100000013553332024565666321000001246764211
Q gi|254780865|r 438 SSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVDKDISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVFFGSAYSS 517 (666)
Q Consensus 438 ~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~~~~~~~~ 517 (666)
T Consensus 394 s~~n~~~l~l~liat~lTa~YS~Rli~~v~~~~~~~~~--~~~~~e~~~~~~~Pl~~La~~Si~~G~~~~~~~~~~~--- 468 (595)
T MTH00211 394 SNLNSWALLLTLLATSLTAAYSLRLIYLSLGGNPRMLP--LSPINEENNSLKNPLKRLAYGSIIGGVFFTLFLLPIK--- 468 (595)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---
T ss_conf 62469999999999999999999999999948988998--8888899889999999999999999999998883578---
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHH
Q ss_conf 34554335753332012336889999999999999999999998704012466564112589998705781689999999
Q gi|254780865|r 518 FWKGALFASSSNNVLERYHEVPLWVEYSSFIAFFVGFFSAFLMYIICPSLPKFLSEKCRFFYCFLQNAWYFDRIYDCLLV 597 (666)
Q Consensus 518 ~~~~~l~~~~~~~~l~~~~~~~l~~~~i~ll~~iiGi~la~lly~~~~~~~~~~~~~~~~l~~~l~~~~y~d~lY~~~iv 597 (666)
T Consensus 469 ---------------~~~~~~p~~~kl~~l~v~~~G~~~a~~l~~~~~~~------~~~~~~~~~~~~~f~~~~~~~~~~ 527 (595)
T MTH00211 469 ---------------NQILSLPFTLKLAALMVTIIGLLLAWELTNLLHSQ------EKVSYLSFSTQLGYYPPIIHRLTP 527 (595)
T ss_pred ---------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC------CCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---------------60416869999999999999999999999987453------442899999999966999999999
Q ss_pred HHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999-9987557-665341549999999999998850962889999999999999999998
Q gi|254780865|r 598 RPIVRLATIL-WKRVDLS-IDKYGPGGIVACVRYLSSYSSRLQTGYLDHYAFSMLIGISILVIVMLL 662 (666)
Q Consensus 598 k~~~~ls~~l-~~~~D~~-i~d~~v~gi~~~v~~~s~~lr~lQtG~i~~Yi~~i~igl~llli~~ll 662 (666)
T Consensus 528 ~~~l~~~~~~~~~~~D~~w~E~~g~~g~~~~~~~~s~~~~~~Q~G~ik~Yl~~f~~~l~i~l~~~~~ 594 (595)
T MTH00211 528 KLWLNLGQKLSTQLMDRGWIEKIGPKGLGANQTKLSSLVTQAQQGLIKMYLAIMLLTLLLILLILLL 594 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999698887997789999999999999999987329999999999999999999997