HHsearch alignment for GI: 254780865 and conserved domain: PRK06473
>PRK06473 NAD(P)H-quinone oxidoreductase subunit D4; Validated.
Probab=100.00 E-value=0 Score=691.91 Aligned_cols=462 Identities=23% Similarity=0.408 Sum_probs=395.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEE
Q ss_conf 79899999999999999730124214789999999999999999999997258985289997531013088223577874
Q gi|254780865|r 4 IYEVIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWIIFDGLDIPWGLRI 83 (666)
Q Consensus 4 l~~l~~~~Pl~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~~~~~~~~~~~~ 83 (666)
T Consensus 1 mLsllI~lPLlgAll~~~l~~~~~~~~~~~i~l~~~~~~~~~sl~l~~~~~~~~~~~~-~~~~~~Wi~--~~gi~~~l~v 77 (500)
T PRK06473 1 MLSALIWVPLLGAILIGFLPSGLNGKLSRSVALVIASVLLLLSLVLAFQFDPGNPNQQ-FTEFIPWID--SLGLSYHLGV 77 (500)
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE-EEEEECCCC--CCCEEEEEEH
T ss_conf 9899999999999999997523545999999999999999999999999918998669-998742567--6780677535
Q ss_pred EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Q ss_conf 33789999999999999999974753068886618999999999999999865589999888888568899887620344
Q gi|254780865|r 84 DTLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKE 163 (666)
Q Consensus 84 D~ls~~~~~~~~~i~~~~~~ys~~y~~~~~~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li~~~~~~~ 163 (666)
T Consensus 78 Dgls~~ll~lt~~l~~i~-i~~~~--~~~~~~~~f~~l~ll~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~LI~~~g-~~ 153 (500)
T PRK06473 78 DGLSLPLLVLNSLLTLIA-IYSSD--ESLERPRFYYSLLLLLNAGVSGAFLAQDLLLFFLFYELELIPLYLLIAIWG-GQ 153 (500)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHCC--CCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC-CH
T ss_conf 888999999999999999-99636--655641299999999999999999975299999999999999999999438-78
Q ss_pred HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
Q ss_conf 54103630002212247899999999999962059899998754310001245555666666665320245531799999
Q gi|254780865|r 164 SAIKASMKAFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIIC 243 (666)
Q Consensus 164 ~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (666)
T Consensus 154 ~~~~aa~ky~i~~~~gs~~~L~gi~~l~~~~g~~~~~~~~~~~~-------------------------~~~~~~~~~~~ 208 (500)
T PRK06473 154 RRGYAATKFLLYTAISGILVLVSFLGLVWLSGASSFDYEPLLSH-------------------------TLPLATQLLLL 208 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH-------------------------CCCCHHHHHHH
T ss_conf 88999998999997526899999999999938650889999872-------------------------67524899999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCHH-CCCCCCCCCHHHHHHHHHHHHHHHHHH-CCCC-CCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999865433432343124000-023322100013456666777999963-0135-7813444456777778876300
Q gi|254780865|r 244 LLFFLGAMGKSAQLLLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMS-PLFE-LSPFVLDCITVLGCITAFFAAT 320 (666)
Q Consensus 244 ~l~~~g~~~K~a~~P~h~WLp~A~-~aPtpvSAllhs~~mv~~Gvy~l~r~~-~~~~-~~~~~~~~~~~~g~~t~~~g~~ 320 (666)
T Consensus 209 ~~~l~gf~~K~~~~P~H~WLPdA~~~aPt~vSall-sg~l~K~G~y~liR~~~~~~~~~~~~~~~~l~~lg~~t~i~g~~ 287 (500)
T PRK06473 209 APILVGFGIKIPLVPFHTWLPDAHVEASTPVSVLL-AGVLLKLGTYGLLRFGVGLFPEAWVYLAPWLATWAVVSVLYGAS 287 (500)
T ss_pred HHHHHHHHHHHHHCCCHHHHCHHHHCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999862131215031414200898504778-89999888998798666412457999999999999999989999
Q ss_pred HHHCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCC---CC
Q ss_conf 111024520244321000135334456553---111003465553100012222101232111000011012776---15
Q gi|254780865|r 321 VGLVQHDIKRVIAYSTCSQLGYMFVALGCR---AYGASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGL---YP 394 (666)
Q Consensus 321 ~al~q~d~Kr~lAySsis~~G~i~~~~g~~---~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~~~~~~i~~~gGl---~~ 394 (666)
T Consensus 288 ~Al~Q~DlKrllAYSSis~mG~i~lgi~~~~~~g~~ga~~~~i~H~~~k~~LFl~~G~i-~~~~gt~~i~~lgGL~~~~~ 366 (500)
T PRK06473 288 CAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLSILAAVAQMISHGLISALLFLLVGVV-YKKTGSRDVDVLRGLLNPER 366 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCHHHHCCHHHHHC
T ss_conf 99998036278898569999999999996765679999999999999999999999999-98628813998589453322
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 46699999998864210110000000024432178888889864102444442102211345433310342457874433
Q gi|254780865|r 395 HLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVD 474 (666)
Q Consensus 395 ~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~~~~~~~~~~~~~~~lt~~Y~~r~~~~vF~G~~~~~ 474 (666)
T Consensus 367 ~mP~~~~~f~i~~la~~G~P------p~~GF~~k~li~~g~~~~~~--~~~~~~~~~~~lta~Y~l~~~~~~f~G~~~-- 436 (500)
T PRK06473 367 GLPITGSLMILGVMASAGIP------GMVGFIAEFLVFRGSFPIFP--VQTLLCMIGTGLTAVYFLLLINRVFFGRLT-- 436 (500)
T ss_pred CCCHHHHHHHHHHHHHCCCC------CCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--
T ss_conf 08399999999999871774------30409999999999999859--999999999999999999999999808997--
Q ss_pred CCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 210000001355333202456566632100000124
Q gi|254780865|r 475 KDISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVF 510 (666)
Q Consensus 475 ~~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~ 510 (666)
T Consensus 437 -~~~~~~~~~~~~~~~~~~~L~~~~i~~Gi~P~~~l 471 (500)
T PRK06473 437 -AELSNLPRVLWSERLPALVLAVLIVILGIQPSWLV 471 (500)
T ss_pred -CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf -00256899738699999999999999997689999