>TIGR01972 NDH_I_M proton-translocating NADH-quinone oxidoreductase, chain M; InterPro: IPR010227 This entry describes the 13th (based on Escherichia coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex.; GO: 0008137 NADH dehydrogenase (ubiquinone) activity, 0042773 ATP synthesis coupled electron transport.

Probab=100.00 E-value=0 Score=719.56 Aligned_cols=472 Identities=25% Similarity=0.417 Sum_probs=412.4 Q ss_pred HHHHHHHHHHHHHHHHHHCC--CCHH---HHHHHHHHHHHHHHHHHHHHHHH-HHCCCC-CEEEEEEEEEEEECCCCCEE Q ss_conf 89999999999999973012--4214---78999999999999999999999-725898-52899975310130882235 Q gi|254780865|r 6 EVIVFLPLIGAVFSGFFGRL--MGKQ---FADIFTSLLMVIGAFLSWYVFYE-IGFGHD-VQVVKREIFPWIIFDGLDIP 78 (666) Q Consensus 6 ~l~~~~Pl~~a~i~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~wi~~~~~~~~ 78 (666) T Consensus 2 s~~iflPligal~~l~~~~~~~~~~~~~~~~r~~Al~~~~~~l~l~~~l~~~~fD~~~~~~~fQ~~e~~~Wip~-~lG~~ 80 (532) T TIGR01972 2 SLLIFLPLIGALLILLLPRQNNKGKAREQAVRWIALVVALATLLLSLLLLFQEFDPTNSGPGFQFTESLPWIPA-DLGIS 80 (532) T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCC-CCCEE T ss_conf 69998999999999983456776025899999999999999999999998604334566444015773112234-55704 Q ss_pred EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 77874337899999999999999999747530688--8661899999999999999986558999988888856889988 Q gi|254780865|r 79 WGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHDDP--HRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLI 156 (666) Q Consensus 79 ~~~~~D~ls~~~~~~~~~i~~~~~~ys~~y~~~~~--~~~~f~~~l~l~~~~m~~~~~s~~l~~~~v~wE~~~l~sy~Li 156 (666) T Consensus 81 Y~lGVDGiSl~l~~LtaLlt~l~~~~~w~~R~i~k~g~~k~f~~~~L~le~~~~G~F~A~D~~LFY~FwE~~LiPmyllI 160 (532) T TIGR01972 81 YHLGVDGISLLLVLLTALLTLLSILASWESREIQKEGRVKEFYALLLLLEAGVIGVFLALDLLLFYVFWEAMLIPMYLLI 160 (532) T ss_pred EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 64203279999999999999999998654401047885799999999999999999999989999999999998899998 Q ss_pred HHHC----CCHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 7620----34454103630002212247899999999999962------0598999987543100012455556666666 Q gi|254780865|r 157 GFWS----FKESAIKASMKAFVVNRIGDLGLILAISAIIYLFH------SVDFDAVFQNASHYWKIGNSVSSGMVSHRSF 226 (666) Q Consensus 157 ~~~~----~~~~~~~a~~k~~~~~~~g~~~~l~~i~~l~~~~g------s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (666) T Consensus 161 g~WGdka~~g~~R~yAA~KFfLYTl~GSvlML~a~l~l~~~~g~~~~~~tF~l~~l~~~~~------------------- 221 (532) T TIGR01972 161 GVWGDKAEAGPNRIYAAMKFFLYTLAGSVLMLLAILGLYFLGGTQLLILTFDLAELLNQPV------------------- 221 (532) T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHCCCC------------------- T ss_conf 6411001364652378899999999999999999999999823411121034288740213------------------- Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH-CCCCCCCCCHHHHHHHHHHHHHHHHHH-CCC-CCCHHH Q ss_conf 65320245531799999999999865433432343124000-023322100013456666777999963-013-578134 Q gi|254780865|r 227 SFFGIDVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMS-PLF-ELSPFV 303 (666) Q Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~g~~~K~a~~P~h~WLp~A~-~aPtpvSAllhs~~mv~~Gvy~l~r~~-~~~-~~~~~~ 303 (666) T Consensus 222 ------~~~~~~q~~Lf~aFf~aFAvK~PlfPlHTWLPDAH~~Apt~gSV~L-aGvLlK~G~YGflRf~LpLfPdas~~f 294 (532) T TIGR01972 222 ------NLPLSVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVIL-AGVLLKMGTYGFLRFNLPLFPDASLYF 294 (532) T ss_pred ------CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH T ss_conf ------6419999999999999855224776653343203102774689999-999998888999998765449999999 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCC---CCCCHHHHHHHHHCCHHHHHHHCCCCCCCC Q ss_conf 44456777778876300111024520244321000135334456553---111003465553100012222101232111 Q gi|254780865|r 304 LDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCR---AYGASIFHLFTHAFFKALLFLGSGSVIHAV 380 (666) Q Consensus 304 ~~~~~~~g~~t~~~g~~~al~q~d~Kr~lAySsis~~G~i~~~~g~~---~~~~a~~~~~~H~~~ka~LFl~aG~vi~~~ 380 (666) T Consensus 295 ~p~~~~L~~~~IiYgal~A~aQ~D~KrLiAYSSiSHMGfV~LGifs~n~~G~~GA~~qM~~HGl~~a~LFl~vG-~ly~R 373 (532) T TIGR01972 295 APVLAALAVIAIIYGALIALAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVLQMISHGLITAALFLLVG-VLYDR 373 (532) T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH T ss_conf 99999999999999999999986288999986357999999999976188999999999986699999999999-99863 Q ss_pred CCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCCCCCHHH Q ss_conf 00001101277615----466999999988642101100000000244321788888898641-----024444421022 Q gi|254780865|r 381 AGEQDMRRMGGLYP----HLPRTCWMMIVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSS-----HFTFVFFLLLFA 451 (666) Q Consensus 381 ~~~~~i~~~gGl~~----~~P~~~~~~~i~~lsl~G~P~~~~~~p~~gf~sk~~il~~~~~~~-----~~~~~~~~~~~~ 451 (666) T Consensus 374 ~hTr~i~~~GGl~~hp~~~mP~~~~f~~~~~~As~GlP------Gt~GFvGEFl~l~G~f~~~~~S~P~~~~~~~~A~~G 447 (532) T TIGR01972 374 AHTRDIAKYGGLANHPYRKMPVLAAFFMLFAMASLGLP------GTSGFVGEFLILLGAFKSDILSFPVNPVVAFLAALG 447 (532) T ss_pred HCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH T ss_conf 24333786251343021111479999999999733200------003499999999854167766755189999999999 Q ss_pred HHHHHHHHHHCCCCCCCCC----------CCCC-C-CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC Q ss_conf 1134543331034245787----------4433-2-100000013553332024565666321000001246 Q gi|254780865|r 452 AFLTSFYSWRLMFLTFFGK----------MRVD-K-DISHKIHESPLVMQIPLFILAIGSIFFGFIFHDVFF 511 (666) Q Consensus 452 ~~lt~~Y~~r~~~~vF~G~----------~~~~-~-~~~~~~~e~~~~m~~pl~vLa~~si~~G~~~~~~~~ 511 (666) T Consensus 448 ~vl~A~Y~L~~~~r~~fG~~~P~~~~~~~~~~~~~~~~~~~~~Dl~~rE~~~~~~lv~~~~~lGlyP~~~l~ 519 (532) T TIGR01972 448 IVLTAAYMLWLYKRVFFGERKPDSLYLQDKISNISDPEVAEFPDLNGREIAVLAPLVVLILFLGLYPKPLLD 519 (532) T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH T ss_conf 999999999999998517987853121022002543134323675088999999999999999724568875

HHsearch alignment for GI: 254780865 and conserved domain: TIGR01972