RPSBLAST alignment for GI: 254780865 and conserved domain: TIGR01972

>gnl|CDD|162632 TIGR01972, NDH_I_M, proton-translocating NADH-quinone oxidoreductase, chain M. This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. Length = 479
 Score =  119 bits (300), Expect = 3e-27
 Identities = 123/472 (26%), Positives = 193/472 (40%), Gaps = 53/472 (11%)

Query: 7   VIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREI 66
           +++FLPLIGA+         GK         L  +   L     ++   G   Q    E 
Sbjct: 3   LLIFLPLIGALLILLLPSKKGKARWIALVVALATLLLSLLLLFQFDPT-GSGFQFT--ES 59

Query: 67  FPWIIFDGLDIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFSYLSFFT 126
            PWI    L I + L +D +S +  V++ ++  ++ I +         +  +  +L    
Sbjct: 60  IPWI--PALGISYHLGVDGIS-LPLVLLTALLTLLSILASWESIQKRVKEFYALFLLLEA 116

Query: 127 FAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGLILA 186
             + V  + D LL   F WE + +  YLLIG W    + I A+MK F+    G L ++LA
Sbjct: 117 GVIGVFAALDLLLFYVF-WEAMLIPMYLLIGVWG-GPNRIYAAMKFFLYTLAGSLLMLLA 174

Query: 187 ISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIICLLF 246
           I  + +L  + D   +                   S +++ F                 F
Sbjct: 175 ILGLYFLGGTFDLLELINL------------PLPFSVQTWLFLA---------------F 207

Query: 247 FLGAMGKSAQLLLHVWLPDAM-EGPTPVSALIHAATMVTAGVFLVARMSPLF-ELSPFVL 304
           F+    K     LH WLPDA  E PT  S ++    +       +    PLF + S +  
Sbjct: 208 FIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFPDASLYFA 267

Query: 305 DCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGC-----RAYGASIFHL 359
             +  L  I   + A + L Q DIKR+IAYS+ S +G  FV LG           ++F +
Sbjct: 268 PVLAALAVIAIIYGALIALAQTDIKRLIAYSSISHMG--FVLLGIFSFNELGISGAVFQM 325

Query: 360 FTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFGIPETS 419
            +H    A LFL  G V++  A  +D+ + GGL   +P      ++  +A    G+P   
Sbjct: 326 ISHGLITAALFLLVG-VLYDRAHTRDIAKYGGLANKMPVLAAFFMLFAMA--SLGLP--- 379

Query: 420 IGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKM 471
            G SGF  + +IL  A+       V FL      LT+ Y   L    FFG++
Sbjct: 380 -GTSGFVGEFLILLGAFKV--NPVVAFLAALGIVLTAAYMLWLYKRVFFGEL 428