RPSBLAST alignment for GI: 254780865 and conserved domain: CHL00025
>gnl|CDD|176967 CHL00025, ndhF, NADH dehydrogenase subunit 5. Length = 741
Score = 378 bits (974), Expect = e-105
Identities = 203/503 (40%), Positives = 280/503 (55%), Gaps = 47/503 (9%)
Query: 1 MAMIYE---VIVFLPLIGAVFSG---FFGRLMGKQFADI---FTSLLMVIGAFLSWYVFY 51
M Y+ +I FLPL + G K + + LL+ I S +
Sbjct: 1 MEHTYQYAWIIPFLPLPVPMLIGLGLLLFPTATKNLRRMWAFPSILLLSIVMIFSLNLSI 60
Query: 52 EIGFGHDVQVVKREIFPWIIFDGLDIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHD 111
+ G + + ++ W I + + +G ID L+S+M +++ ++ +V IYS YM
Sbjct: 61 QQINGSSIY---QYLWSWTINNDFSLEFGYLIDPLTSIMLILITTVGILVLIYSDNYMSH 117
Query: 112 DPHRPRFFSYLSFFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMK 171
D RFF+YLSFF +ML LV+S NL+Q++ WE VG+ SYLLIGFW + A A K
Sbjct: 118 DQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQK 177
Query: 172 AFVVNRIGDLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGI 231
AFV NR+GD GL+L I ++ S +F +F+ N + + V+ F
Sbjct: 178 AFVTNRVGDFGLLLGILGFYWITGSFEFRDLFE------IFNNLIYNNEVN----LLFAT 227
Query: 232 DVHPHDSIAIICLLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVA 291
+ L FLG + KSAQ LHVWLPDAMEGPTP+SALIHAATMV AG+FLVA
Sbjct: 228 ---------LCAFLLFLGPVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVA 278
Query: 292 RMSPLFELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRA 351
R+ PLF + P++++ I+++G ITA AT+ L Q DIKR +AYST SQLGYM +ALG +
Sbjct: 279 RLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGS 338
Query: 352 YGASIFHLFTHAFFKALLFLGSGSVIH---AVAG-----EQDMRRMGGLYPHLPRTCWMM 403
Y A++FHL THA+ KALLFLGSGSVIH + G Q+M MGGL ++P T
Sbjct: 339 YRAALFHLITHAYSKALLFLGSGSVIHSMEPIVGYSPDKSQNMVLMGGLRKYMPITKTTF 398
Query: 404 IVGTLALTGFGIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLM 463
++GTL+L GIP + F+SKD IL ++ S + A LT+FY +R+
Sbjct: 399 LLGTLSLC--GIPP----LACFWSKDEILNDSWLYS--PIFAIIAWSTAGLTAFYMFRIY 450
Query: 464 FLTFFGKMRVDKDISHKIHESPL 486
LTF G +RV S
Sbjct: 451 LLTFEGHLRVHFQNYSGKKNSSF 473