RPSBLAST alignment for GI: 254780865 and conserved domain: PRK06525

>gnl|CDD|180606 PRK06525, PRK06525, hydrogenase 4 subunit D; Validated. Length = 479
 Score =  216 bits (553), Expect = 1e-56
 Identities = 148/516 (28%), Positives = 240/516 (46%), Gaps = 73/516 (14%)

Query: 11  LPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWI 70
           LP IGA+   F       +   +F +L  +    L++  FY+ G        K  +   +
Sbjct: 10  LPFIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAY-AFYQAG--------KVAVTLTL 60

Query: 71  IFDGLDIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHD-------DPHRPRFFSYLS 123
           +  G    +GL ID +S ++  VV  +  +V +YS GYM              R++++L 
Sbjct: 61  VNLGDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGNREHPVHEGTGRYYAFLL 120

Query: 124 FFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGL 183
            F  AM  LV S  LL +   +E  GL S+ LI ++     A+++++KA ++  IG LGL
Sbjct: 121 LFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQ-SPKALRSALKALLITHIGSLGL 179

Query: 184 ILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIIC 243
            LA + +     +    A+           + +   +                  +  + 
Sbjct: 180 YLAAATLFLQTGTFALSAL-----------SGLHGSL----------------KYLVFLG 212

Query: 244 LLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVAR----MSPLFEL 299
           +LF   A GKSAQL  + WLPDAME PTP SA +HAA+MV  GV++ AR    M P+  +
Sbjct: 213 ILF--AAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHV 270

Query: 300 SPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYG------ 353
             +V     V+  +T  +   + L Q D+KR++AYST +QLGYMF  L     G      
Sbjct: 271 IGYV---GAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSRLALE 327

Query: 354 ASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGF 413
            SI ++F HAF K+L FL +G++ ++  G + + R+ G+   LP       V  LA+T  
Sbjct: 328 GSIAYIFNHAFAKSLFFLVAGALSYS-CGTRLLPRLRGVLKKLPLVGVGFCVAALAIT-- 384

Query: 414 GIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTS--FYSWRLMFLTFFGKM 471
           G+P     F+GFFSK  I    +  S   ++    +    + S   ++W   FL +FG++
Sbjct: 385 GVPP----FNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVASFAW---FLRWFGRV 437

Query: 472 RVDK--DISHKIHESPLVMQIPLFILAIGSIFFGFI 505
              +  +        P  M++ L +L + S+    I
Sbjct: 438 VFGEPSEAVADAAPLPGSMKLVLIVLIVMSLVSPVI 473