RPSBLAST alignment for GI: 254780865 and conserved domain: PRK06525
>gnl|CDD|180606 PRK06525, PRK06525, hydrogenase 4 subunit D; Validated. Length = 479
Score = 216 bits (553), Expect = 1e-56
Identities = 148/516 (28%), Positives = 240/516 (46%), Gaps = 73/516 (14%)
Query: 11 LPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQVVKREIFPWI 70
LP IGA+ F + +F +L + L++ FY+ G K + +
Sbjct: 10 LPFIGALVVFFLPGRRAAELGVLFAALTTLCMLSLAY-AFYQAG--------KVAVTLTL 60
Query: 71 IFDGLDIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHD-------DPHRPRFFSYLS 123
+ G +GL ID +S ++ VV + +V +YS GYM R++++L
Sbjct: 61 VNLGDVALFGLVIDPVSVLIGFVVVLLGLLVTLYSTGYMSPGNREHPVHEGTGRYYAFLL 120
Query: 124 FFTFAMLVLVSSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIGDLGL 183
F AM LV S LL + +E GL S+ LI ++ A+++++KA ++ IG LGL
Sbjct: 121 LFIGAMAGLVYSSTLLGLLLFFEITGLCSWALISYYQ-SPKALRSALKALLITHIGSLGL 179
Query: 184 ILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSIAIIC 243
LA + + + A+ + + + + +
Sbjct: 180 YLAAATLFLQTGTFALSAL-----------SGLHGSL----------------KYLVFLG 212
Query: 244 LLFFLGAMGKSAQLLLHVWLPDAMEGPTPVSALIHAATMVTAGVFLVAR----MSPLFEL 299
+LF A GKSAQL + WLPDAME PTP SA +HAA+MV GV++ AR M P+ +
Sbjct: 213 ILF--AAWGKSAQLPFYSWLPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHV 270
Query: 300 SPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYMFVALGCRAYG------ 353
+V V+ +T + + L Q D+KR++AYST +QLGYMF L G
Sbjct: 271 IGYV---GAVMAIVTLLYGFLMYLPQQDMKRLLAYSTITQLGYMFFGLSLAILGSRLALE 327
Query: 354 ASIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGF 413
SI ++F HAF K+L FL +G++ ++ G + + R+ G+ LP V LA+T
Sbjct: 328 GSIAYIFNHAFAKSLFFLVAGALSYS-CGTRLLPRLRGVLKKLPLVGVGFCVAALAIT-- 384
Query: 414 GIPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTS--FYSWRLMFLTFFGKM 471
G+P F+GFFSK I + S ++ + + S ++W FL +FG++
Sbjct: 385 GVPP----FNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVASFAW---FLRWFGRV 437
Query: 472 RVDK--DISHKIHESPLVMQIPLFILAIGSIFFGFI 505
+ + P M++ L +L + S+ I
Sbjct: 438 VFGEPSEAVADAAPLPGSMKLVLIVLIVMSLVSPVI 473