RPSBLAST alignment for GI: 254780865 and conserved domain: COG1008

>gnl|CDD|31212 COG1008, NuoM, NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]. Length = 497
 Score =  127 bits (320), Expect = 1e-29
 Identities = 126/510 (24%), Positives = 220/510 (43%), Gaps = 51/510 (10%)

Query: 1   MAMIYEVIVFLPLIGAVFSGFFGRLMGKQFADIFTSLLMVIGAFLSWYVFYEIGFGHDVQ 60
              +  +++FLPLIGA+           +FA     ++ +    LS Y+F          
Sbjct: 2   SFPLLSLLIFLPLIGALLILLIPD--NGKFARWIALVVSLATLLLSLYLFAGFDISSP-G 58

Query: 61  VVKREIFPWIIFDGLDIPWGLRIDTLSSVMFVVVNSISAVVHIYSIGYMHDDPHRPRFFS 120
               E +PWI    L + + L +D +S ++ V++ ++  ++ I +     +   RP+ F 
Sbjct: 59  FQFVESYPWI--PQLGLSYHLGVDGIS-LLLVLLTALLTLLAILA--SWREIEKRPKLFY 113

Query: 121 YLSFFTFAMLVLV-SSDNLLQMFFGWEGVGLASYLLIGFWSFKESAIKASMKAFVVNRIG 179
            L       ++ V ++ +LL  +  WE + +  Y LIG W  K   I A+ K F+   +G
Sbjct: 114 ALFLLLEGGVIGVFAALDLLLFYVFWELMLIPMYFLIGIWGGKRR-IYAATKFFLYTLLG 172

Query: 180 DLGLILAISAIIYLFHSVDFDAVFQNASHYWKIGNSVSSGMVSHRSFSFFGIDVHPHDSI 239
            L ++LA   + +L  S  FD +   A        ++  G+   ++  F G         
Sbjct: 173 SLFMLLAFLYLYFLTGSPTFDILELLA-------LNLPLGV---QTLLFLG--------- 213

Query: 240 AIICLLFFLGAMGKSAQLLLHVWLPDA-MEGPTPVSALIHAATMVTAGVFLVARMSPLF- 297
                 F +    K     LH WLPDA +E PT  S ++    +   G  L+    PLF 
Sbjct: 214 ------FLIAFAVKMPLFPLHTWLPDAHVEAPTAGSVILAGILLKMGGYGLLRFSLPLFP 267

Query: 298 ELSPFVLDCITVLGCITAFFAATVGLVQHDIKRVIAYSTCSQLGYM---FVALGCRAYGA 354
           + S +    +  LG I+  + A V   Q DIKR+IAYS+ S +G++     +        
Sbjct: 268 DASAYFAPLLVALGVISIIYGALVAFAQTDIKRLIAYSSISHMGFVTLGIFSFNELGVSG 327

Query: 355 SIFHLFTHAFFKALLFLGSGSVIHAVAGEQDMRRMGGLYPHLPRTCWMMIVGTLALTGFG 414
           ++F + +H    A LFL  G V++     +D+  +GGL   +P+   + ++  +A    G
Sbjct: 328 AVFQMLSHGLISAALFLLVG-VLYERTHTRDIADLGGLANKMPKLAALFMLFAMA--SLG 384

Query: 415 IPETSIGFSGFFSKDIILEVAYTSSHFTFVFFLLLFAAFLTSFYSWRLMFLTFFGKMRVD 474
           +P    G SGF  + +IL  ++    F +V FL  F   LT+ Y   +    FFG   + 
Sbjct: 385 LP----GTSGFVGEFLILLGSF--QVFPWVAFLAAFGLILTAVYMLWMYQRVFFG--PLK 436

Query: 475 KDISHKIHESPLVMQIPLFILAIGSIFFGF 504
           +    ++ +        L  L +  +F G 
Sbjct: 437 EGSLAELPDLNGREVFILAPLVVLILFLGV 466