HHsearch alignment for GI: 254780866 and conserved domain: COG0651
>COG0651 HyfB Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism].
Probab=100.00 E-value=0 Score=581.48 Aligned_cols=476 Identities=25% Similarity=0.473 Sum_probs=393.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998630888818999863134854054665
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLG 80 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (499)
T Consensus 1 ~~~-~~~~~i~~~l~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~-~gi~~~ 72 (504)
T COG0651 1 MNN-LLLLPIILPLLAAALLLLFLGLRR-LKAKRFLALLGALGLLLLSILGFLEVGG--P---VGGLGGWLAP-FGIVLA 72 (504)
T ss_pred CCH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCC--C---CCCCCCCCCC-CEEEEE
T ss_conf 960-477899999999999999987767-8899999999999999999999999466--4---2001456787-106874
Q ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCCCC--HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC
Q ss_conf 22588999999999999999752011210--0235678999863024302654043311123431034312355312343
Q gi|254780866|r 81 VDGISILLVVLTTFLTPFCILSSWKSIQE--NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS 158 (499)
Q Consensus 81 iD~ls~~f~~l~~~i~~l~~~ys~~~~~~--~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~ 158 (499)
T Consensus 73 ~D~ls~~f~l~~~lv~~~~~iys~~~~~~~~~~~~~~~l~~l~~~g~~g~~~t~dlfnl~Vf~Ei~~isS~~Li~~~~~~ 152 (504)
T COG0651 73 ADPLSAIFLLIIALVGLLASLYSIGYMRHEKERAYYYFLLLLLLAGMLGAFLTGDLFNLYVFFEIMTLSSYFLVAHYGGR 152 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 20457999999999999999982898623330039999999999999999997559999999999999999999980876
Q ss_pred -CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC--CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf -32321000113554455677666554432100010034432101--330378999985410344455400023201010
Q gi|254780866|r 159 -ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSK--FPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNA 235 (499)
Q Consensus 159 -~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~--~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~ 235 (499)
T Consensus 153 ~~~~~a~~~Y~i~~~~~~~l~L~gv~lly~~tGtln~~~i~~~~~~~~~~~~~~~~~~L~ligf~~KaglfPlh~WLP~A 232 (504)
T COG0651 153 RRQASAGFKYLILGHIGTLLLLIGVGLLYAATGTLNFADIALKLSSELDPGLGIAAFLLLLIGFGVKAGLFPLHFWLPDA 232 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHEECHHH
T ss_conf 56664577887788689999999999999971720299887554203463589999999999999963765112331012
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC--CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCH
Q ss_conf 002222344333323223332111000011122331--000000000122222122111000024432233210013540
Q gi|254780866|r 236 HVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS--QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGY 313 (499)
Q Consensus 236 y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~--~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~ 313 (499)
T Consensus 233 ~~~ap~pvSAllS~v~~k~g~y~i~ril~~~~~~~~~~~~~~~~l~~~~~~t~i~G~~~Al~q~d~KRlLAYsti~q~G~ 312 (504)
T COG0651 233 HSEAPSPVSALLSGVLVKVGVYGILRILYLVFPLLGGAYLWGNLLIALGILTILFGVLYALLQKDIKRLLAYSTVSQMGY 312 (504)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 06796169999989999999999999999992640003578999999999999999999999999999999999988999
Q ss_pred HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHC
Q ss_conf 23331048754221023455542102333035677776420011110023556542023320134555530102444311
Q gi|254780866|r 314 VTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFI 393 (499)
Q Consensus 314 i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~ 393 (499)
T Consensus 313 illg~~ig~~~~l~~ai~~~l~H~l~K~~LFL~aG~v~~~~g~~~i~~~gGl~~~~P~~~~~~~i~~lsl~GlPp~~GF~ 392 (504)
T COG0651 313 ILLGLGIGTPLGLAGAIFHLLNHALVKALLFLGAGAVLYRTGTRDLEKLGGLAKRMPLTAVAFLIGALSLAGLPPFNGFI 392 (504)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 99999966805799999999999999999999711899972733197703747545399999999999980798505389
Q ss_pred CHHHHHHHHHH-----HHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 22899999998-----6599-99999999999999999999999728898765556878891268999999999999977
Q gi|254780866|r 394 GEFLVIMSVFQ-----NSNT-VAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGI 467 (499)
Q Consensus 394 ~k~~i~~~~~~-----~~~~-~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi 467 (499)
T Consensus 393 sk~~l~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ila~~~i~~g~ 471 (504)
T COG0651 393 SKFLLIQALFKANALLAILIILAALILLASLATFISLARIFMLLFFGQGAP-IERDVPEVPLLMLAPMVILAILCLVLGL 471 (504)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-HHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999987622236999999999999999999999999999986034674-1015542148888879999999999986
Q ss_pred HHHHHHHHHH-HHHHHHHH
Q ss_conf 2488999999-99999985
Q gi|254780866|r 468 YPVPIRDTFS-VPLSSIIE 485 (499)
Q Consensus 468 ~p~~~~~~~~-~~~~~l~~ 485 (499)
T Consensus 472 ~~~~~~~~~~~~~~~~~~~ 490 (504)
T COG0651 472 APDPLLPKILQAAAAILLV 490 (504)
T ss_pred HHHHHHHHHHHHHHHHHHH
T ss_conf 1799999888899998712