HHsearch alignment for GI: 254780866 and conserved domain: MTH00112
>MTH00112 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=417.54 Aligned_cols=337 Identities=18% Similarity=0.267 Sum_probs=277.8
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 35678999863024302654043311123431034312355312343323210001135544556776665544321000
Q gi|254780866|r 112 REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKT 191 (499)
Q Consensus 112 ~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs 191 (499)
T Consensus 3 ~~~ll~~~~lilG~~~~~sS~~~~~~wvglEl~~ls~~~Li~~~~~~~s~Ea~~KYFl~~~~~S~~~L~g~~l~y~~tg~ 82 (345)
T MTH00112 3 HAKLIITTSLILGTLITISSNHWLLAWTGLEINTLAIIPLISKSHHPRAIEAATKYFLTQAAASALILFSSTTNAWNTGQ 82 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 89999999999999999999899999999999999999999869995189999999999999999999999999999838
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
Q ss_conf 10034432101330378999985410344455400023201010002222344333323223332111000011122331
Q gi|254780866|r 192 SSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS 271 (499)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~ 271 (499)
T Consensus 83 ~~i~~~~~~---------~~~~li~~~l~~Klg~~PfH~W~Pdv~~g~~~~~~~~ls-t~~Kia~~~il~~~~~~----- 147 (345)
T MTH00112 83 WDITQLTNP---------TSCTILTLALAMKLGLAPFHFWLPEVLQGSTTTTALILL-TWQKLAPLTLLLMTSNS----- 147 (345)
T ss_pred CHHHHHCCH---------HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHH-HHHHHHHHHHHHHHHCC-----
T ss_conf 067652126---------899999999999981342441099998579688999999-99999999999998222-----
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 00000000012222212211100002443223321001354023331048754221023455542102333035677776
Q gi|254780866|r 272 QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIY 351 (499)
Q Consensus 272 ~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~ 351 (499)
T Consensus 148 -~~~~il~~~~~lS~~vG~~~al~Q~~iKrlLAYSSIsh~G~ml~~l~~~~~----~~~~~~~~Y~i~~~~~f~~~---- 218 (345)
T MTH00112 148 -LNTTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIAHLGWMIAIITYAPK----LTLLTFYLYIIMTTTMFLTL---- 218 (345)
T ss_pred -CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH----
T ss_conf -104999999999999999999842008999999999999999999998699----99999999999999999999----
Q ss_pred HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42001111002355654202332013455553010244431122899999998659-99999999999999999999999
Q gi|254780866|r 352 DRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRK 430 (499)
Q Consensus 352 ~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~ 430 (499)
T Consensus 219 ~~~~~~~i~~l~~l~~~~p~~~~~~~i~llSLaGlPP~~GF~~K~~i~~~~i~~~~~~l~~i~il~S~isl~yYlRi~y~ 298 (345)
T MTH00112 219 NTTSTKTIKDMGTSWTKSPMLNATLMLTLLSLAGLPPLTGFMPKWLILQELTKQNMTPTATTMAMLSLLSLFFYLRLAYY 298 (345)
T ss_pred HHHCCCCHHHHHCCHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99767759987282410099999999999872656521158899999999998484999999999999999999999999
Q ss_pred HHCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 972889876555--687889126899999999999997724889
Q gi|254780866|r 431 VVFGVSKCEKVQ--QLKDLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 431 ~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~i~ 342 (345)
T MTH00112 299 STITLPPNTTNMMKKWRTKPKKNTTTAILTTLSTLLLPLTPMIL 342 (345)
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99867999998667377799962599999999999999889999