HHsearch alignment for GI: 254780866 and conserved domain: MTH00137

>MTH00137 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00  E-value=0  Score=534.09  Aligned_cols=398  Identities=21%  Similarity=0.322  Sum_probs=347.8

Q ss_pred             EEEEEECC---CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHH
Q ss_conf             99863134---8540546652258899999999999999975201121--002356789998630243026540433111
Q gi|254780866|r   64 MIEYYHWI---DYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFY  138 (499)
Q Consensus        64 ~~~~~~~~---~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~  138 (499)
T Consensus        66 ~~~~~~w~~~~~~~i~~~f~~D~~S~~f~~vv~~Is~~I~~yS~~YM~~d~~~~RF~~~l~lF~~sMl~LV~s~Nl~~lf  145 (611)
T MTH00137         66 IITNWHWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLLFLIAMIILVTANNMFQLF  145 (611)
T ss_pred             EEEEHHHHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf             25412453238815176632185389999999999999999978970799982279999999999999999974399999


Q ss_pred             HHHHHCCCCCEEEEEECC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf             234310343123553123-4332321000113554455677666554432100010034432101330378999985410
Q gi|254780866|r  139 IFFEASLIPMFVIIGVWG-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFC  217 (499)
Q Consensus       139 v~~El~~l~~~~Li~~~~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~  217 (499)
T Consensus       146 iGWEgvGl~SylLI~~w~~r~~a~~aa~~a~l~nRiGDiglll~i~~l~~~~gs~~~~~i~~~~~~~~~--~~~~~~l~l  223 (611)
T MTH00137        146 IGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWFAMNLNSWEIQQIFALSKDFDL--TLPLLGLIL  223 (611)
T ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCH--HHHHHHHHH
T ss_conf             999999999999999953986789999999999934389999999999999777449999986121035--999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEE
Q ss_conf             3444554000232010100022223443333-232233321110000111223310000000001222221221110000
Q gi|254780866|r  218 SFAIKIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQ  296 (499)
Q Consensus       218 g~~~K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q  296 (499)
T Consensus       224 aa~~KSAQfPfh~WLP~A-MegPTPVSALlHSsTmV~AGVyLliR~~-pl~~~-~~~~l~~~l~lG~lT~l~aa~~Al~Q  300 (611)
T MTH00137        224 AATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRLS-PLMEN-NQTALTTCLCLGALTTLFTATCALTQ  300 (611)
T ss_pred             HHHHHHCCCCCCHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             997542317560523888-6589816799988899996189999985-78762-69999999999999999999999731


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCC
Q ss_conf             244322332100135402333104875422102345554210233303567777642-0011110023556542023320
Q gi|254780866|r  297 TDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVV  375 (499)
Q Consensus       297 ~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~  375 (499)
T Consensus       301 ~DiKkiiAyST~SQLGlM~~~iGlg~~---~lA~fHL~tHA~FKAlLFL~aG~iIH~~~~~QDir~mGgl~~~mP~t~~~  377 (611)
T MTH00137        301 NDIKKIVAFSTSSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHNLTPFTSSC  377 (611)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH
T ss_conf             218789998788899999999874628---89999999999999999983069999637853199867974102899999


Q ss_pred             HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             1345555301024443112289999999865--99999999999999999999999997288987655568788912689
Q gi|254780866|r  376 MMVFTMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERC  453 (499)
Q Consensus       376 ~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~  453 (499)
T Consensus       378 ~~igsLaL~G~PflsGFySKD~IlE~~~~s~~n~~~~~l~~~at~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~E~~~~m~~  457 (611)
T MTH00137        378 LTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFLPLSPINENNPAVIN  457 (611)
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
T ss_conf             99999998534231378758999999986670899999999999999999999999995589988787888889778999


Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             9999999999997724
Q gi|254780866|r  454 MVYPIAVLTVFFGIYP  469 (499)
Q Consensus       454 ~~~~l~~~~i~lGi~p  469 (499)
T Consensus       458 pl~~La~gSI~~G~ll  473 (611)
T MTH00137        458 PIKRLAWGSIIAGLLI  473 (611)
T ss_pred             HHHHHHHHHHHHHHHH
T ss_conf             9999999999999999