HHsearch alignment for GI: 254780866 and conserved domain: MTH00137
>MTH00137 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=534.09 Aligned_cols=398 Identities=21% Similarity=0.322 Sum_probs=347.8
Q ss_pred EEEEEECC---CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCCEEEEECCCCCHH
Q ss_conf 99863134---8540546652258899999999999999975201121--002356789998630243026540433111
Q gi|254780866|r 64 MIEYYHWI---DYFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIAFLVLESMVIGAFLSLDMLLFY 138 (499)
Q Consensus 64 ~~~~~~~~---~~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~llll~~~~~~~~~~s~dl~~l~ 138 (499)
T Consensus 66 ~~~~~~w~~~~~~~i~~~f~~D~~S~~f~~vv~~Is~~I~~yS~~YM~~d~~~~RF~~~l~lF~~sMl~LV~s~Nl~~lf 145 (611)
T MTH00137 66 IITNWHWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPNMNRFFKYLLLFLIAMIILVTANNMFQLF 145 (611)
T ss_pred EEEEHHHHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 25412453238815176632185389999999999999999978970799982279999999999999999974399999
Q ss_pred HHHHHCCCCCEEEEEECC-CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHC
Q ss_conf 234310343123553123-4332321000113554455677666554432100010034432101330378999985410
Q gi|254780866|r 139 IFFEASLIPMFVIIGVWG-GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFC 217 (499)
Q Consensus 139 v~~El~~l~~~~Li~~~~-~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~ 217 (499)
T Consensus 146 iGWEgvGl~SylLI~~w~~r~~a~~aa~~a~l~nRiGDiglll~i~~l~~~~gs~~~~~i~~~~~~~~~--~~~~~~l~l 223 (611)
T MTH00137 146 IGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWFAMNLNSWEIQQIFALSKDFDL--TLPLLGLIL 223 (611)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCH--HHHHHHHHH
T ss_conf 999999999999999953986789999999999934389999999999999777449999986121035--999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEE
Q ss_conf 3444554000232010100022223443333-232233321110000111223310000000001222221221110000
Q gi|254780866|r 218 SFAIKIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQ 296 (499)
Q Consensus 218 g~~~K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q 296 (499)
T Consensus 224 aa~~KSAQfPfh~WLP~A-MegPTPVSALlHSsTmV~AGVyLliR~~-pl~~~-~~~~l~~~l~lG~lT~l~aa~~Al~Q 300 (611)
T MTH00137 224 AATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLIRLS-PLMEN-NQTALTTCLCLGALTTLFTATCALTQ 300 (611)
T ss_pred HHHHHHCCCCCCHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 997542317560523888-6589816799988899996189999985-78762-69999999999999999999999731
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-HCCCCCCHHHHHHHHHHCCCCC
Q ss_conf 244322332100135402333104875422102345554210233303567777642-0011110023556542023320
Q gi|254780866|r 297 TDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-LHTRDIFAYGGLVHNMPRYAVV 375 (499)
Q Consensus 297 ~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~g~~~l~~l~Gl~~~~P~~~~~ 375 (499)
T Consensus 301 ~DiKkiiAyST~SQLGlM~~~iGlg~~---~lA~fHL~tHA~FKAlLFL~aG~iIH~~~~~QDir~mGgl~~~mP~t~~~ 377 (611)
T MTH00137 301 NDIKKIVAFSTSSQLGLMMVTIGLNQP---QLAFLHICTHAFFKAMLFLCSGSIIHSLNDEQDIRKMGGLHNLTPFTSSC 377 (611)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH
T ss_conf 218789998788899999999874628---89999999999999999983069999637853199867974102899999
Q ss_pred HHHHHHHHCCCHHHHHHCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 1345555301024443112289999999865--99999999999999999999999997288987655568788912689
Q gi|254780866|r 376 MMVFTMANMGLPGTSGFIGEFLVIMSVFQNS--NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERC 453 (499)
Q Consensus 376 ~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~--~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 453 (499)
T Consensus 378 ~~igsLaL~G~PflsGFySKD~IlE~~~~s~~n~~~~~l~~~at~lT~~Ys~Rl~~~~~~~~~~~~~~~~~~E~~~~m~~ 457 (611)
T MTH00137 378 LTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSMGHPRFLPLSPINENNPAVIN 457 (611)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
T ss_conf 99999998534231378758999999986670899999999999999999999999995589988787888889778999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999997724
Q gi|254780866|r 454 MVYPIAVLTVFFGIYP 469 (499)
Q Consensus 454 ~~~~l~~~~i~lGi~p 469 (499)
T Consensus 458 pl~~La~gSI~~G~ll 473 (611)
T MTH00137 458 PIKRLAWGSIIAGLLI 473 (611)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999999