HHsearch alignment for GI: 254780866 and conserved domain: MTH00160
>MTH00160 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=374.86 Aligned_cols=327 Identities=16% Similarity=0.227 Sum_probs=266.7
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 67899986302430265404331112343103431235531234332321000113554455677666554432100010
Q gi|254780866|r 114 YMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSS 193 (499)
Q Consensus 114 f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~ 193 (499)
T Consensus 6 ~~i~~~~~~~g~l~~~ss~~~~~lwv~lEi~~l~~~~l~~~~~~~~s~ea~~KYfi~q~~~S~~~L~~~~~~~~~~~~~~ 85 (336)
T MTH00160 6 KILFLSTLILGTLISISSNSWFGAWMGLEINLLSFIPLISNKKNLLSSESSLKYFLIQALASSMLLFSIILMMLNSFFNN 85 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999989999999999999999999984899417999999999999999999999999999987778
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
Q ss_conf 03443210133037899998541034445540002320101000222234433332322333211100001112233100
Q gi|254780866|r 194 IIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQY 273 (499)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~ 273 (499)
T Consensus 86 ~---------------~~~~li~~~l~~Klg~~PfH~Wlpdv~~~~~~~~~~~lst-~~Ki~pl~~l~~~--------~~ 141 (336)
T MTH00160 86 S---------------FSSMMINSSLLLKLGAAPFHFWFPSVMEGLSWINCFILMT-WQKIAPLILLSYI--------IN 141 (336)
T ss_pred H---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH-HHHHHHHHHHHHH--------HH
T ss_conf 9---------------9999999999999864028865999984787899999999-9999999999999--------85
Q ss_pred CCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 00000001222221221110000244322332100135402333104875422102345554210233303567777642
Q gi|254780866|r 274 FAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR 353 (499)
Q Consensus 274 ~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~ 353 (499)
T Consensus 142 ~~~~l~~~~~lS~~~G~~~al~q~~iKrllaySSI~~~G~ml~~~~~~~~~~----~~y~~~Y~~~----~~~~~~~~~~ 213 (336)
T MTH00160 142 INSFIIILIILSAIIGALGGLNQTSLRKLLAYSSINHLGWMLSAMMISENLW----LIYFLIYSII----SLSIILLFNK 213 (336)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH----HHHHHHHHHH
T ss_conf 7899999999999999998774777899999988988999999999869999----9999999999----9999999988
Q ss_pred HCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00111100235565420233201345555301024443112289999999865-99999999999999999999999997
Q gi|254780866|r 354 LHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNS-NTVAVLASFGVVLSALYSLWLYRKVV 432 (499)
Q Consensus 354 ~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~-~~~~~~~~~~~~ls~~~~l~~~~~~~ 432 (499)
T Consensus 214 ~~~~~~~~~~~~~~~~p~~~~~~~i~~lSL~GiPP~~GF~~K~~ii~~~~~~~~~~l~~~~il~S~is~~yYlri~~~~~ 293 (336)
T MTH00160 214 FNIFHLNQLFNSMNMSKIIKFLLFLNLLSLGGLPPFLGFFPKWIVIQFLILNNMYFLLFILIMSSLITLYFYLRISYSSF 293 (336)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 36446998865543149999999999987668851416899999999999837299999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 28898765556878891268999999999999977248899
Q gi|254780866|r 433 FGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPIR 473 (499)
Q Consensus 433 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~~ 473 (499)
T Consensus 294 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~i~~~~~~~~~~ 333 (336)
T MTH00160 294 MLNYSENKWN-LNKKNKSMILSLLILSFISIFGLIFISLIF 333 (336)
T ss_pred HCCCCCCCHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7589875315-640542799999999999999988899999