HHsearch alignment for GI: 254780866 and conserved domain: MTH00197
>MTH00197 ND2 NADH dehydrogenase subunit 2; Provisional.
Probab=100.00 E-value=0 Score=370.22 Aligned_cols=297 Identities=16% Similarity=0.229 Sum_probs=251.1
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 35678999863024302654043311123431034312355312343323210001135544556776665544321000
Q gi|254780866|r 112 REYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKT 191 (499)
Q Consensus 112 ~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs 191 (499)
T Consensus 2 P~~~~~~l~~~~g~l~~vsS~n~~~~wvglEl~~l~~~~li~~~~~~~s~ea~~KYFiiq~~gS~~~L~g~~l~~~~~~~ 81 (325)
T MTH00197 2 PSSFFFYIFMVGGVLLSLSSSNWFLVWVGLEMNLICFIPLLSQAKSLSEIESAFKYFLFQEVGSYLVLVGGLLSFLPLPL 81 (325)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 57999999999999999999999999999999999999999869993189999999999999999999999999999863
Q ss_pred CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
Q ss_conf 10034432101330378999985410344455400023201010002222344333323223332111000011122331
Q gi|254780866|r 192 SSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLAS 271 (499)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~ 271 (499)
T Consensus 82 ~~~~---------------~~~li~~gl~~KlG~~PfH~W~p~v~~~~~~~~~~ll~-t~~Ki~pl~il~~~~------- 138 (325)
T MTH00197 82 ETLG---------------WGALVISGLSVKLGVAPFHFWVPPVVSSVSWFNCFLLL-VWQKLAPLFILASLS------- 138 (325)
T ss_pred HHHH---------------HHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHH-HHHHHHHHHHHHHHC-------
T ss_conf 8999---------------99999999999857653010447887677199999999-999999999999954-------
Q ss_pred CCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf 00000000012222212211100002443223321001354023331048754221023455542102333035677776
Q gi|254780866|r 272 QYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIY 351 (499)
Q Consensus 272 ~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~ 351 (499)
T Consensus 139 -~~~~~l~~~~~lS~~~G~i~al~Q~~iKrlLAYSSI~h~G~~l~~~~~~~----~~~~~y~~~Y~~~~~~~~~~----l 209 (325)
T MTH00197 139 -SSKIGLSWCGVTSVLWGAIGMMGQSNIRQILAYSSINQTGWMLSVIVYSP----SILPFYFLIYFTIMVALLLF----L 209 (325)
T ss_pred -CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHH----H
T ss_conf -33689999999999998764034044029999988988999999999859----99999999999999999999----9
Q ss_pred HHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 42001111002355654202332013455553010244431122899999998659-99999999999999999999999
Q gi|254780866|r 352 DRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQNSN-TVAVLASFGVVLSALYSLWLYRK 430 (499)
Q Consensus 352 ~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~~~-~~~~~~~~~~~ls~~~~l~~~~~ 430 (499)
T Consensus 210 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~lSLaGiPPf~GF~~K~~ii~~~i~~~~~~l~~i~ll~S~isl~yYLrl~~~ 289 (325)
T MTH00197 210 SQMNFYASFSQKNVPDTMSWGLMLLGLSLLSLSGFPPLVGFFPKWLSVEVLLSSGSSLLTFLVMIASCFSLYAYISLGYK 289 (325)
T ss_pred HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99877089898726653699999999999998630438669999999999998283999999999999999999999999
Q ss_pred HHCCCCCCCC
Q ss_conf 9728898765
Q gi|254780866|r 431 VVFGVSKCEK 440 (499)
Q Consensus 431 ~~~g~~~~~~ 440 (499)
T Consensus 290 ~~~~~~~~~~ 299 (325)
T MTH00197 290 ILNWAKNVLM 299 (325)
T ss_pred HHHCCCCCCC
T ss_conf 9980987647