HHsearch alignment for GI: 254780866 and conserved domain: MTH00208
>MTH00208 ND5 NADH dehydrogenase subunit 5; Provisional.
Probab=100.00 E-value=0 Score=520.28 Aligned_cols=421 Identities=20% Similarity=0.286 Sum_probs=362.2
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEEEEEECCC---CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC--CHHHHHHHH
Q ss_conf 999999999986308888189998631348---540546652258899999999999999975201121--002356789
Q gi|254780866|r 43 INFIFSLFVWSVFDKGRSSFQMIEYYHWID---YFCSYHLGVDGISILLVVLTTFLTPFCILSSWKSIQ--ENFREYMIA 117 (499)
Q Consensus 43 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~iD~ls~~f~~l~~~i~~l~~~ys~~~~~--~~~~~f~~l 117 (499)
T Consensus 66 ~~~~~sl~pl~~~~~~g~~~~~~~~~~W~~~~~f~i~~sf~~D~~S~~F~~vvl~Vs~sI~~fS~~YM~~Dp~~~rF~~~ 145 (631)
T MTH00208 66 SLAFLSLIPLFLYISLGCPEINITLSNWLSNNGFSFSLSFIFDFYFNLFFSVALIVTWSIIEFSHYYMSNDPNKNAFFRL 145 (631)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 99999999999998189852412075776238815063121694299999999999999999967870089992169999
Q ss_pred HHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf 99863024302654043311123431034312355312343-32321000113554455677666554432100010034
Q gi|254780866|r 118 FLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIID 196 (499)
Q Consensus 118 lll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~ 196 (499)
T Consensus 146 l~lF~~sM~~Lv~s~Nl~~lfiGWeGvGl~SflLI~~w~~r~~a~~aal~a~l~NRiGD~glll~~~~~~~~~~s~~~~~ 225 (631)
T MTH00208 146 LIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWWTTRSDANSSALQAVIYNRIGDIGLLLFFSLSLLNFNSWNLSE 225 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf 99999999999997139999999999999998967664795899999999999998879999999999999958812999
Q ss_pred HHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCC
Q ss_conf 4321013303789999854103444554000232010100022223443333-232233321110000111223310000
Q gi|254780866|r 197 LYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFA 275 (499)
Q Consensus 197 ~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~ 275 (499)
T Consensus 226 ~~~~~~~~~~~~~~~~~~l~laa~~KSAQfplh~WLP~A-MegPTPVSALlHssTmVtAGVyLliR~~-p~~~-~~~~~~ 302 (631)
T MTH00208 226 ILLINNNNSFLINLLLFGLLLAAAGKSAQFGLHPWLPAA-MEGPTPVSALLHSSTMVVAGVFLLIRTS-PLYS-NSPFFN 302 (631)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHCC-CHHH-HHHHHH
T ss_conf 998705530489999999999998652307574210566-4699818888856578762166642107-5143-009999
Q ss_pred CHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH-H
Q ss_conf 000001222221221110000244322332100135402333104875422102345554210233303567777642-0
Q gi|254780866|r 276 PVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDR-L 354 (499)
Q Consensus 276 ~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~-~ 354 (499)
T Consensus 303 ~~~l~iG~~T~l~a~~~Al~q~DiKkIiA~ST~SQLG~M~~~iglg~~---~la~fHl~tHA~FKAlLFLcaGsiIH~~~ 379 (631)
T MTH00208 303 SWCLILGGITALFAASTAISQHDIKKIVAYSTTSQLGLMVVAIGLGQP---IIAFFHICTHAFFKAMLFLCSGSIIHSLN 379 (631)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999999999999999999878878741103078999999971308---89999999999999999982338998268
Q ss_pred CCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 011110023556542023320134555530102444311228999999986--599999999999999999999999997
Q gi|254780866|r 355 HTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQN--SNTVAVLASFGVVLSALYSLWLYRKVV 432 (499)
Q Consensus 355 g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~--~~~~~~~~~~~~~ls~~~~l~~~~~~~ 432 (499)
T Consensus 380 ~~QDiRkMGgl~~~~P~t~~~~~igslaL~G~PflsGFySKD~IiE~~~~s~~n~~~~~l~liat~lTa~YS~Rlif~~f 459 (631)
T MTH00208 380 DEQDIRKMGGLSFLLPVTSACIILGSLALSGTPFLAGFYSKDLILEAGLASLSNFLGIILAFLATLLTAVYSFRIIFFCF 459 (631)
T ss_pred CHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 74479986798642739999999999998286222115037999999997510799999999999999999999999874
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 2889876555687889126899999999999997724
Q gi|254780866|r 433 FGVSKCEKVQQLKDLSLRERCMVYPIAVLTVFFGIYP 469 (499)
Q Consensus 433 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p 469 (499)
T Consensus 460 ~g~~~~~~~~~i~E~~~~m~~Pl~~La~gSI~~G~l~ 496 (631)
T MTH00208 460 SLPPSFSPLSPISEENNNLTNALNRLALGTIISGWFF 496 (631)
T ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4789887411177798989999999999999999999