HHsearch alignment for GI: 254780866 and conserved domain: PRK02546
>PRK02546 NAD(P)H-quinone oxidoreductase subunit 4; Provisional.
Probab=100.00 E-value=0 Score=716.32 Aligned_cols=484 Identities=34% Similarity=0.651 Sum_probs=436.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCEEEEEEEEECCC-CCEEEEE
Q ss_conf 8307899999999999999872035530357999999999999999999998-6308888189998631348-5405466
Q gi|254780866|r 2 NLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWS-VFDKGRSSFQMIEYYHWID-YFCSYHL 79 (499)
Q Consensus 2 ~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~l 79 (499)
T Consensus 8 ~~PwLsllI~lPLlgalli~~l~~~~~~-~~~~~~al~~~l~~~~l~l~~~~~~~~~~~~~~q~~~~~~Wip~lgi~~~l 86 (531)
T PRK02546 8 NFPWLTTIILFPIVAALLIPFIPDKGDG-KTVRWYALIVGLIDFLITVAAFYTGYDPSNPGLQLVESYSWLPQLGLTWSV 86 (531)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEE
T ss_conf 4699999999999999999997603631-889999999999999999999999828888874899985304766717998
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 52258899999999999999975201121002356789998630243026540433111234310343123553123433
Q gi|254780866|r 80 GVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSE 159 (499)
Q Consensus 80 ~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~ 159 (499)
T Consensus 87 gvDglSl~lvlLt~~l~~l~~l~s~~~-~~~~~~f~~l~L~~~~~m~gvf~a~Dl~~fyvf~E~~~i~sy~LIg~~g~~~ 165 (531)
T PRK02546 87 GADGLSMPLILLTGFITTLAVLAAWPV-TFKPKLFYFLMLAMYGGQIAVFAVQDMLLFFLAWELELIPVYLLLAIWGGKK 165 (531)
T ss_pred EEHHHHHHHHHHHHHHHHHHHHHCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 525668999999999999999740544-6663099999999999999999980799999999999999999999809899
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23210001135544556776665544321000100--3443210133037899998541034445540002320101000
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSI--IDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~--~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~ 237 (499)
T Consensus 166 ~~~Aa~k~~l~t~~gs~~lL~~~~~l~~~~g~~~f~~~~l~~-~~~~~~~~~~~~~~~li~f~vK~~~fP~H~WLPdA~~ 244 (531)
T PRK02546 166 RQYAATKFILYTAGSSLFILLAALAMAFYGDTPSFDMTHLAA-KDFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHG 244 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC
T ss_conf 999999999999777999999999999984873799999985-4356279999999999999985010345126688877
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22223443333232233321110000111223310000000001222221221110000244322332100135402333
Q gi|254780866|r 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIG 317 (499)
Q Consensus 238 ~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~ 317 (499)
T Consensus 245 ~aPt~~S~llagvl~K~G~Y~liR~~~~l~p~~~~~~~~~l~~lg~itii~gal~Al~Q~DiKrllAYSSIshmG~i~lG 324 (531)
T PRK02546 245 EATAPVHMLLAGILLKMGGYALLRMNAGMLPDAHAQFAPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIG 324 (531)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89906788888999987445349987764125788872599999999999999999987338999999999999999999
Q ss_pred HCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHH
Q ss_conf 10487542210234555421023330356777764200111100235565420233201345555301024443112289
Q gi|254780866|r 318 IFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFL 397 (499)
Q Consensus 318 l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~ 397 (499)
T Consensus 325 i~~~~~~g~~Gai~~~~~H~~~ka~LFl~~G~i~~r~gt~~i~~lgGL~~~mP~~~~~f~i~~la~~GlP~~~GF~sk~l 404 (531)
T PRK02546 325 IGSFSDLGTSGAMLQMISHGLIGASLFFLVGATYDRTHTLMLDEMGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELM 404 (531)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
T ss_conf 99715999999999999999999999999818999739616787188687755999999999999873420260999999
Q ss_pred HHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999865-------9999999999999999999999999728898765--5568788912689999999999999772
Q gi|254780866|r 398 VIMSVFQNS-------NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEK--VQQLKDLSLRERCMVYPIAVLTVFFGIY 468 (499)
Q Consensus 398 i~~~~~~~~-------~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~l~~~~i~lGi~ 468 (499)
T Consensus 405 il~G~~~~~~~~~~~~~~~~~~a~~g~vl~a~Y~l~~~~rvf~G~~~~~~~~~~~~~dl~~rE~~~~~~l~~~~~~~G~y 484 (531)
T PRK02546 405 VFVGFATDDAYTLPFRVVVVFLAAIGVILTPIYLLSMLREIFFGKENKELVSHENLVDAEPREVYIIACLLVPIIGIGLY 484 (531)
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99722104543106999999999999999999999999999759998543434568788788999999999999999758
Q ss_pred HHHHHHHHHHHHHHHHHHCC
Q ss_conf 48899999999999985202
Q gi|254780866|r 469 PVPIRDTFSVPLSSIIENYT 488 (499)
Q Consensus 469 p~~~~~~~~~~~~~l~~~~~ 488 (499)
T Consensus 485 P~~~l~~~~~~v~~l~~~~~ 504 (531)
T PRK02546 485 PKLVTQSYDATINQLVARDR 504 (531)
T ss_pred CHHHHHHHHHHHHHHHHHHH
T ss_conf 89987032889999999766