HHsearch alignment for GI: 254780866 and conserved domain: PRK06277
>PRK06277 hydrogenase subunit F; Validated.
Probab=100.00 E-value=0 Score=627.50 Aligned_cols=468 Identities=18% Similarity=0.256 Sum_probs=394.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCCCEEEEEEEEECCCCCEEEEE
Q ss_conf 98307899999999999999872035530357999999999999999999998-63088881899986313485405466
Q gi|254780866|r 1 MNLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWS-VFDKGRSSFQMIEYYHWIDYFCSYHL 79 (499)
Q Consensus 1 m~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (499)
T Consensus 1 m~l--L~l~v~~Pl~~a~li~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~---~~i~~ 68 (479)
T PRK06277 1 MNL--LPLMVVFPMICAIIFNLLHGK---DKLIKPLTLLTAILLPILPFIGSYGIYFFGGHGP----ENGLH---SGITY 68 (479)
T ss_pred CCH--HHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH----HHCCC---CCCEE
T ss_conf 976--899999999999999996795---5899999999999999999999988772554106----54035---67010
Q ss_pred EEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 52258899999999999999975201121002356789998630243026540433111234310343123553123433
Q gi|254780866|r 80 GVDGISILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSE 159 (499)
Q Consensus 80 ~iD~ls~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~ 159 (499)
T Consensus 69 ~~d~l~~~~~~~~~l~~~l~~~~~~~~-~~~~~~f~~l~l~~~~~~~g~~~s~dl~~~fvf~E~~~i~sy~Li~~~~~~~ 147 (479)
T PRK06277 69 LYGPAKQLIITVLMLIASLVLITGLGE-KKSSGLYVALMLMGLASVSAIVLADDIFNIYVFFEIAAIAQVGLVIASGTEK 147 (479)
T ss_pred EECHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 453066999999999999999999510-3467889999999999999999997899999999999999999999779899
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 232100011355445567766655443210001003443210133--037899998541034445540002320101000
Q gi|254780866|r 160 RIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFP--FSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237 (499)
Q Consensus 160 ~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~--~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~ 237 (499)
T Consensus 148 ~~~aa~ky~i~~~~gs~~~L~gi~~ly~~tgs~~~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~l~PfH~Wlpday~ 227 (479)
T PRK06277 148 AYRTALKYMILGNVAGSILLLGIAFLLAATGTLNISDMHNFLLNNPTTPTIYGGLLMLIIGLLYGSGLPPFHTVKADIYA 227 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHC
T ss_conf 99999999999999999999999999999679579999999871964089999999999999999874234214033407
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC--CCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHH
Q ss_conf 222234433332322333211100001112233--100000000012222212211100002443223321001354023
Q gi|254780866|r 238 QAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLA--SQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVT 315 (499)
Q Consensus 238 ~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~--~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~ 315 (499)
T Consensus 228 ~ap~~~salLs~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~tii~g~l~Al~Q~dlKrllAYSSIs~~Gyi~ 306 (479)
T PRK06277 228 KAKPFGSALLQTY-SKFVLVALMLVIFKLFGGLSYFASAQGVLIALSVLAMVFGVVMALLQTDYKKLLAYHAISQGGYVA 306 (479)
T ss_pred CCCHHHHHHHHHH-HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_conf 6867999999999-999999999999997022444689999999999999999999999712468888887899999999
Q ss_pred HHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCH
Q ss_conf 33104875422102345554210233303567777642001111002355654202332013455553010244431122
Q gi|254780866|r 316 IGIFSGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGE 395 (499)
Q Consensus 316 ~~l~~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k 395 (499)
T Consensus 307 lgi~~~~~~~~~gai~~~i~h~~~k~~LFl-~g~i~~~~~~~~i~~l~Gl~~~~P~~a~~~~i~~lsl~GiPp~~GF~sK 385 (479)
T PRK06277 307 AGLALGTPLGIVAGIFHAINHVIYKSALFL-GAHIVYRTKEGNLNKLGGLLPVMPAVAFMVLCAKLAISGVPPFNGFQSK 385 (479)
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999837688899999999999999999999-9999995598529986281867799999999999999866664279999
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999865-999999999999999999999999972889876555--687889126899999999999997724889
Q gi|254780866|r 396 FLVIMSVFQNS-NTVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQ--QLKDLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 396 ~~i~~~~~~~~-~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
T Consensus 386 ~~i~~~a~~~~~~~l~~~~~~~sv~~~~y~lr~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l~i~~Gi~P~~~ 465 (479)
T PRK06277 386 LLLAQAAMNVNMPELAIIMIIVSIGTFVSMMKAFYLIYLKPCPEEQLEEYKKAKVPKYAVFSLVVLTILCIILGICPDLV 465 (479)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999838799999999999999999999999996088885433334667898879999999999999999633999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780866|r 473 RDTFSVPLSSI 483 (499)
Q Consensus 473 ~~~~~~~~~~l 483 (499)
T Consensus 466 l~~i~p~~~~l 476 (479)
T PRK06277 466 TNIIYPFANEI 476 (479)
T ss_pred HHHHHHHHHHH
T ss_conf 99899999986