HHsearch alignment for GI: 254780866 and conserved domain: PRK06521
>PRK06521 hydrogenase 4 subunit B; Validated.
Probab=100.00 E-value=0 Score=668.09 Aligned_cols=479 Identities=20% Similarity=0.325 Sum_probs=408.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEE
Q ss_conf 83078999999999999998720355303579999999999999999999986308888189998631348540546652
Q gi|254780866|r 2 NLPFLSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDYFCSYHLGV 81 (499)
Q Consensus 2 ~~p~l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 81 (499)
T Consensus 3 ~~~l~~~~i~~~l~~a~~~l~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~--~~~~~~~p~~~~~~~l 77 (670)
T PRK06521 3 ALQLLLWSLLLWLALALAGLLLLRRT---RLAIRLSGPTGLLGGLLGLASALTALFAGPTVA--AVLPLGLPWLPFHLRL 77 (670)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE--EECCCCCCCCCEEEEE
T ss_conf 16899999999999999999844781---678999999999999999999998863797620--2425689987558898
Q ss_pred EHHHHHHHHHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECC-
Q ss_conf 2588999999999999999752011210----02356789998630243026540433111234310343123553123-
Q gi|254780866|r 82 DGISILLVVLTTFLTPFCILSSWKSIQE----NFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWG- 156 (499)
Q Consensus 82 D~ls~~f~~l~~~i~~l~~~ys~~~~~~----~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~- 156 (499)
T Consensus 78 D~LSa~fllli~~v~~~~~lYs~~Y~~~~~~~~~~~~~~~~~lf~~~m~~vv~a~dl~~f~vfwElm~l~sy~LV~~~~~ 157 (670)
T PRK06521 78 DSLSAFFLLVISLLGAAASLYSLGYGREYEGKGPGRMGFFYNLFLASMVLVLLADDAFSFLVAWEMMSLSSWFLVMANHR 157 (670)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 77789999999999999999805874106787602899999999999999999958999999999999999999984089
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 43323210001135544556776665544321000100344321013303789999854103444554000232010100
Q gi|254780866|r 157 GSERIYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAH 236 (499)
Q Consensus 157 ~~~~~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y 236 (499)
T Consensus 158 ~~~~~~Aa~~y~i~~~~G~~~lL~g~~lly~~~Gs~~f~~~~~~~-~~~~~~~~~f~l~l~Gf~~Kagl~PfH~WLP~A~ 236 (670)
T PRK06521 158 DAENRRAGFLYLLMAHAGTLAILLAFGLLAGESGSYDFAAMRAAH-LSPFLASLVFLLALFGFGAKAGLVPLHVWLPRAH 236 (670)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
T ss_conf 899999999999999999999999999999994791099998505-5616899999999999998737375502215777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 02222344333323223332111000011122331000000000122222122111000024432233210013540233
Q gi|254780866|r 237 VQAPTAGSVFLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTI 316 (499)
Q Consensus 237 ~~ap~~~salls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~ 316 (499)
T Consensus 237 ~~APtpVSALlSgvmvK~GvygliR~~~~l~~~~~~~~~~~ll~lg~~t~v~G~l~Al~Q~DiKRlLAYSSIsq~G~i~l 316 (670)
T PRK06521 237 PAAPSHVSALMSGVMTKVAIYGILRVVFDLLGAPQWWWGVLVLALGAISAVLGVLYALAETDLKRLLAYSTIENIGIIFV 316 (670)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88980899999888999999999998887046348899999999999999999999998845899999988999999999
Q ss_pred HHCCC-----------CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCC
Q ss_conf 31048-----------7542210234555421023330356777764200111100235565420233201345555301
Q gi|254780866|r 317 GIFSG-----------MKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMG 385 (499)
Q Consensus 317 ~l~~~-----------~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G 385 (499)
T Consensus 317 glG~~~~~~~~g~~~l~~l~~~gal~H~~nHa~fK~lLFl~aG~v~~~tgtr~i~~mgGL~~~mP~t~~~flig~lai~G 396 (670)
T PRK06521 317 GLGLAMVFIAYGMPALAALALTAALYHLLNHALFKSLLFLGAGAVLHATGTRDMEKLGGLIRRMPWTAWAFLIGCLAISA 396 (670)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99852331001210213789999999999999999999999999999968651889589554347999999999999863
Q ss_pred CHHHHHHCCHHHHHHHHHHHH----H-------HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 024443112289999999865----9-------99999999999999999999999972889876555687889126899
Q gi|254780866|r 386 LPGTSGFIGEFLVIMSVFQNS----N-------TVAVLASFGVVLSALYSLWLYRKVVFGVSKCEKVQQLKDLSLRERCM 454 (499)
Q Consensus 386 ~Pp~~GF~~k~~i~~~~~~~~----~-------~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 454 (499)
T Consensus 397 lPP~~GF~Sk~li~q~~~~~~~~~~~~~~~~~~~~~~~lal~~ala~~~fvk~~g~~FlG~pR~~~~~~~~e~p~~m~~~ 476 (670)
T PRK06521 397 LPPLNGFVSEWLLFQSLLSSPGLPQWGLKLLVPLAAALLALTAALAAMCFVKFYGITFLGRPRSPKAEQAHEVPRWMRAA 476 (670)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 66425499999999999845666615899999999999999999999999999998303799987655778797435799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999772488999999999999852
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVPIRDTFSVPLSSIIEN 486 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~~~ 486 (499)
T Consensus 477 m~iLA~~cv~~Gl~p~~~~~~l~~~~~~~~~~ 508 (670)
T PRK06521 477 MLLLAALCVLLGLLPGWVAPLIAPVAQALVGG 508 (670)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
T ss_conf 99999999999955487798888999873144