HHsearch alignment for GI: 254780866 and conserved domain: PRK06588
>PRK06588 putative monovalent cation/H+ antiporter subunit D; Reviewed.
Probab=100.00 E-value=9e-41 Score=240.69 Aligned_cols=323 Identities=15% Similarity=0.167 Sum_probs=236.7
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 99999999999999975201121002356789998630243026540433111234310343123553123433232100
Q gi|254780866|r 86 ILLVVLTTFLTPFCILSSWKSIQENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSERIYAAY 165 (499)
Q Consensus 86 ~~f~~l~~~i~~l~~~ys~~~~~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~~~~~aa~ 165 (499)
T Consensus 25 qlia~afli~t~i~~Ly~isq--~RklE~-li~~LY~gSsIivvfAgDfISmiIswEfMai~s~liIf--s~~~~IKag~ 99 (504)
T PRK06588 25 QLIALAFLIVTAILNLYTISQ--NRKLEC-LIGSLYCLSSIICVFAADFISMIISLEFMTIFACIIIF--CDQLKIKPAR 99 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHC--CCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE--ECCCCCHHHH
T ss_conf 699999999999998986611--522799-99999997687755565799999999999988401688--2730023666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 01135544556776665544321000100344321013303789999854103444554000232010100022223443
Q gi|254780866|r 166 KFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTAGSV 245 (499)
Q Consensus 166 ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~~sa 245 (499)
T Consensus 100 RYlivHlfGggLLLaGI~l~i~~TGnlaft~lte~V~n~-e---L~~~LILiG~LINAA~pPf~aWL~DAYPeAS~SG~V 175 (504)
T PRK06588 100 QYFLTHLFSSGLILIGMTLLIQTTSNTAFTSLTESVNNF-E---LPAIFILAGCLINASAIFVNGWVVNCYPIASSSGIV 175 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCC-C---HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf 645789863399998788852304850012243321243-1---259999999998037775000035657566655302
Q ss_pred CCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 33323223332111000011122331000000000122222122111000024432233210013540233310487542
Q gi|254780866|r 246 FLAGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSGMKSG 325 (499)
Q Consensus 246 lls~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~~~~~ 325 (499)
T Consensus 176 FLsAFTTKtavyvLlRlF----sG-----leILi~lGi~MiiYGiIyALLENd~RRLLaYsiVsQvGfmlAaIgI~sp~i 246 (504)
T PRK06588 176 YLISFTTKVTLIIILKLF----SG-----LEILKFFGISMIIYGLVFSLIEKNLKRLICYLTVSQLGFILAAISINSPNI 246 (504)
T ss_pred HHHHHHHHHHHHHHHHHC----CC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
T ss_conf 245788889999999975----43-----189999979999999999999876999999999987515146760599850
Q ss_pred CCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH
Q ss_conf 21023455542102333035677776420011110023556542023320134555530102444311228999999986
Q gi|254780866|r 326 VEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVFQN 405 (499)
Q Consensus 326 ~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~~~~~~~ 405 (499)
T Consensus 247 ~yli~~fif~hilyng~falyf~~ied~~~iknyqdl~~-t~~n~~ll~gfv~siliy~silpi~ssyik~~i~n~l~~n 325 (504)
T PRK06588 247 AYLITSFIFIHILYNGLFALYFTYIEDEYDIKNYQDLQN-TQINLILLIGFVISILIYTSILPISSSYIKDEIANILNEN 325 (504)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHH-CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
T ss_conf 999999999999985188765401113335331767733-6616445688899999876301153688889998762547
Q ss_pred H-----HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5-----999999999999999999999
Q gi|254780866|r 406 S-----NTVAVLASFGVVLSALYSLWL 427 (499)
Q Consensus 406 ~-----~~~~~~~~~~~~ls~~~~l~~ 427 (499)
T Consensus 326 ~~~~f~ki~tctvlf~l~~e~~~~l~~ 352 (504)
T PRK06588 326 NVMLFSKIATCTVLFGLLMESLHSLPY 352 (504)
T ss_pred CEEEEEHHHHHHHHHHHHHHHHHHHHH
T ss_conf 569862577999999999976340016