HHsearch alignment for GI: 254780866 and conserved domain: PRK12644
>PRK12644 putative monovalent cation/H+ antiporter subunit A; Reviewed.
Probab=100.00 E-value=0 Score=638.55 Aligned_cols=471 Identities=22% Similarity=0.346 Sum_probs=399.3
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCC-CEEEEEEEEHH
Q ss_conf 89999999999999987203553035799999999999999999999863088881899986313485-40546652258
Q gi|254780866|r 6 LSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWIDY-FCSYHLGVDGI 84 (499)
Q Consensus 6 l~lii~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~iD~l 84 (499)
T Consensus 2 l~~~~~~~~-~a~~~p~l~r~~-gr~a~~----~~a~~~l~~~~~~~~~~~~~~~g~~~~~~~~Wip~lgl~l~~rlDgL 75 (968)
T PRK12644 2 LALLLAHAA-AAVLAPLLVRRL-GRRAFY----PLALVPAASFVWVLAQWPAVTPGGEVTVSLPWIPSLGMDLAFRMDAL 75 (968)
T ss_pred HHHHHHHHH-HHHHHHHHHHHH-CHHHHH----HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEECHH
T ss_conf 279999999-999999999984-408889----99999999999999967645689748998632367887268874267
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CC
Q ss_conf 899999999999999975201121---00235678999863024302654043311123431034312355312343-32
Q gi|254780866|r 85 SILLVVLTTFLTPFCILSSWKSIQ---ENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ER 160 (499)
Q Consensus 85 s~~f~~l~~~i~~l~~~ys~~~~~---~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~ 160 (499)
T Consensus 76 S~lfalli~~IG~lv~lYs~~Y~~~~~~~~~rF~~llllF~~aMlGlvls~dl~~lfvfWEltsl~SylLIg~~~~~~~a 155 (968)
T PRK12644 76 AALMSLLVLGVGALVLLYCARYFDDDDGRLGRFAAELVAFAGAMFGLVLSDDLLLLYVFWELTTVLSFLLIGHYAERAAS 155 (968)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 89999999999999999968875148987125999999999999999998219999999999999999999764788889
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32100011355445567766655443210001003443210133037899998541034445540002320101000222
Q gi|254780866|r 161 IYAAYKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAP 240 (499)
Q Consensus 161 ~~aa~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap 240 (499)
T Consensus 156 ~~aA~k~ll~t~~Ggl~lL~giilL~~~~Gt~~ls~i~~~~~~-~~~~~~a~~Lil~Ga~~KsAqfPfH~WLP~Am-aAP 233 (968)
T PRK12644 156 RRAALQALLVTTAGGLAMLVGIIILGQAAGTYRLSELLADPPT-GTAVSVAVVLILVGALSKSAIVPFHFWLPGAM-AAP 233 (968)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-CCC
T ss_conf 9999999999999999999999999999387439999744766-44899999999999999865354600165110-489
Q ss_pred CCCCCCC-CCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 2344333-323223332111000011122331000000000122222122111000024432233210013540233310
Q gi|254780866|r 241 TAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIF 319 (499)
Q Consensus 241 ~~~sall-s~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~ 319 (499)
T Consensus 234 TPVSA~LHSa~mVKaGvYll~R~~-p~~~~-~~~w~~~l~~lG~~T~l~Ga~~Al~Q~DlKrlLAYSTVSqLG~i~l~lG 311 (968)
T PRK12644 234 TPVSAYLHAAAMVKAGVYLVARLA-PGFAD-VPPWRPTVLGLGLATMLLGGWRALRQYDLKLILAYGTVSQLGFLTVVVG 311 (968)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH-HHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 679999999999999999999998-87523-6999999999999999999999996644899999988999999999986
Q ss_pred CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCHHHHH
Q ss_conf 48754221023455542102333035677776420011110023556542023320134555530102444311228999
Q gi|254780866|r 320 SGMKSGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVI 399 (499)
Q Consensus 320 ~~~~~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~Pp~~GF~~k~~i~ 399 (499)
T Consensus 312 lgt~~a~~aa~~hll~HAlfKa~LFm~aG~i~h~tGtrdi~~LgGL~r~mP~Ta~~~~iaalSmaGvPp~~GF~sKE~~~ 391 (968)
T PRK12644 312 LGTRDAALAGLAMLVAHALFKATLFLVVGIIDHQTGTRDIRKLSGLGRRSPPLAVVAALAAASMAGLPPLLGFVAKEAAF 391 (968)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf 26799999999999999999999998563867870875488838955303999999999999985165102799999999
Q ss_pred HHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999986------5999999999999999999999999972889876-555687889126899999999999997724889
Q gi|254780866|r 400 MSVFQN------SNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCE-KVQQLKDLSLRERCMVYPIAVLTVFFGIYPVPI 472 (499)
Q Consensus 400 ~~~~~~------~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~~i~lGi~p~~~ 472 (499)
T Consensus 392 ~a~l~~~~~~~~~~~~~~~~~~~s~lt~aYs~rf~~~~F~~~~~~~~~~~~~h~~~~~m~~pp~~La~~~l~~G~~p~~~ 471 (968)
T PRK12644 392 EAVLHSMLLGPAGPWVLAGIVLGSVLTTAYSLRFLWGAFARKPGVPPRVTEMHPPSPAFLAAPAVLAALTLVLGLWPAPL 471 (968)
T ss_pred HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99870544211899999999999999999999999974268999988878899998078788999999999998227766
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999852
Q gi|254780866|r 473 RDTFSVPLSSIIEN 486 (499)
Q Consensus 473 ~~~~~~~~~~l~~~ 486 (499)
T Consensus 472 ~~~l~~~a~~~~~~ 485 (968)
T PRK12644 472 DAVIGPYADTVPGA 485 (968)
T ss_pred HHHHHHHHHHHCCC
T ss_conf 88889999974168