HHsearch alignment for GI: 254780866 and conserved domain: TIGR00940
>TIGR00940 2a6301s01 monovalent cation:proton antiporter; InterPro: IPR005663 This family of proteins consists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterised systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter.; GO: 0015077 monovalent inorganic cation transmembrane transporter activity, 0030004 cellular monovalent inorganic cation homeostasis.
Probab=100.00 E-value=0 Score=631.21 Aligned_cols=474 Identities=24% Similarity=0.417 Sum_probs=401.7
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCC-CCEEEEEEEEHHHHHH
Q ss_conf 999999999998720355303579999999999999999999986308888189998631348-5405466522588999
Q gi|254780866|r 10 TFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMIEYYHWID-YFCSYHLGVDGISILL 88 (499)
Q Consensus 10 i~lPll~~li~~~~~~~~~~~~~~~~i~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~iD~ls~~f 88 (499)
T Consensus 6 ilp~~~a~~IpIly~~~~rih~gWFv--l~~plV~F~y~l~L~p~t~sGgv---~h~ti~WvP~lG~NFtly~DGl~lLF 80 (809)
T TIGR00940 6 ILPLLLALLIPILYKYDKRIHIGWFV--LAIPLVLFLYTLSLLPITASGGV---VHKTIDWVPELGLNFTLYLDGLALLF 80 (809)
T ss_pred EHHHHHHHHHHHHCCCCCCHHHHHHH--HHHHHHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 07899999988744222320246889--99999999999976556515960---21015877667874213442589999
Q ss_pred HHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCCCCEEEEEECCCC-CCCCCC
Q ss_conf 9999999999997520112---100235678999863024302654043311123431034312355312343-323210
Q gi|254780866|r 89 VVLTTFLTPFCILSSWKSI---QENFREYMIAFLVLESMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGS-ERIYAA 164 (499)
Q Consensus 89 ~~l~~~i~~l~~~ys~~~~---~~~~~~f~~llll~~~~~~~~~~s~dl~~l~v~~El~~l~~~~Li~~~~~~-~~~~aa 164 (499)
T Consensus 81 slLItgIG~LVvLYsiyYlskk~e~l~nFy~ylL~FMGaMLGVVLSdNlI~LyvFWELTS~~SfLLIsyW~hr~~s~ygA 160 (809)
T TIGR00940 81 SLLITGIGVLVVLYSIYYLSKKEEKLPNFYVYLLLFMGAMLGVVLSDNLIVLYVFWELTSLASFLLISYWFHREKSRYGA 160 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998899999999877753012676169999999953565467877899999999999999999988887468888998
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC--CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 001135544556776665544321000100344321013--303789999854103444554000232010100022223
Q gi|254780866|r 165 YKFFLYTFFGSIFMLFAIVVMCWEKKTSSIIDLYAMSKF--PFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHVQAPTA 242 (499)
Q Consensus 165 ~ky~i~~~~~s~~lL~g~~~l~~~~gs~~~~~~~~~~~~--~~~~~~~~~~ll~~g~~~K~~~~PfH~WlP~~y~~ap~~ 242 (499)
T Consensus 161 qksl~ITvfGGlamlgG~ill~~itgsfsi~~~i~~adai~nsplf~~am~LvllGAfTKSAQFPFhiWLPdA-MeAPTP 239 (809)
T TIGR00940 161 QKSLLITVFGGLAMLGGLILLAVITGSFSIDAVIESADAIRNSPLFLTAMVLVLLGAFTKSAQFPFHIWLPDA-MEAPTP 239 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH-CCCCCC
T ss_conf 7543464323689999999885751632399999611354205238999999999876542038755478021-168584
Q ss_pred CCCCCC-CCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 443333-2322333211100001112233100000000012222212211100002443223321001354023331048
Q gi|254780866|r 243 GSVFLA-GIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQTDIKKLIAYSSIAHMGYVTIGIFSG 321 (499)
Q Consensus 243 ~salls-~~~~k~g~~~l~r~~~~l~~~~~~~~~~~l~~l~~~t~~~g~l~al~q~d~KrllAySsi~~~G~i~~~l~~~ 321 (499)
T Consensus 240 VSAYLHSATMVKAGlyL~aR~t-Pvfa-gt~~WfW~v~l~GliTL~wgs~~A~~QqDLKgiLAfSTiS~LGlI~~llglG 317 (809)
T TIGR00940 240 VSAYLHSATMVKAGLYLVARLT-PVFA-GTEAWFWIVALVGLITLLWGSLSAVKQQDLKGILAFSTISQLGLIMVLLGLG 317 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 0276766799998899888761-1202-7557999999999999999999876676667788898885899999999623
Q ss_pred CC---------------CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHCCC
Q ss_conf 75---------------422102345554210233303567777642001111002355654202332013455553010
Q gi|254780866|r 322 MK---------------SGVEGAMFQMLSHGLVSSALFFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGL 386 (499)
Q Consensus 322 ~~---------------~~~~~~~~~~~~h~~~k~~lFl~~g~i~~~~g~~~l~~l~Gl~~~~P~~~~~~~i~~lsl~G~ 386 (499)
T Consensus 318 s~~~Hy~~~DSmiK~YA~A~~AAvFHliNHATFKgsLFM~~GiiDHetGTRDirkLGGL~~iMPitfT~~~i~~aaMAGv 397 (809)
T TIGR00940 318 SASLHYDGDDSMIKIYALAAVAAVFHLINHATFKGSLFMAAGIIDHETGTRDIRKLGGLLAIMPITFTVALIASAAMAGV 397 (809)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 03215488723899999999999998886578768887551502458886157652650104468999999999984477
Q ss_pred HHHHHHCCHHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCHHHH
Q ss_conf 2444311228999999986-----------5999999999999999999999999972889876-555687889126899
Q gi|254780866|r 387 PGTSGFIGEFLVIMSVFQN-----------SNTVAVLASFGVVLSALYSLWLYRKVVFGVSKCE-KVQQLKDLSLRERCM 454 (499)
Q Consensus 387 Pp~~GF~~k~~i~~~~~~~-----------~~~~~~~~~~~~~ls~~~~l~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 454 (499)
T Consensus 398 PpfNGFLSKEmFf~~~~~a~~~n~f~~~T~GyLFP~~a~vasvFtfvYs~~fi~~~FfG~~Kpe~lp~k~HE~p~~Ml~s 477 (809)
T TIGR00940 398 PPFNGFLSKEMFFAEAITASLVNLFDVETLGYLFPVVAIVASVFTFVYSLKFIFRVFFGRYKPEDLPKKAHEAPILMLLS 477 (809)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCC
T ss_conf 53342112788888888875157422025667877999999999999999999865168856012679888776075306
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
Q ss_conf 9999999999977248899999999999985202002
Q gi|254780866|r 455 VYPIAVLTVFFGIYPVPIRDTFSVPLSSIIENYTLKT 491 (499)
Q Consensus 455 ~~~l~~~~i~lGi~p~~~~~~~~~~~~~l~~~~~~~~ 491 (499)
T Consensus 478 p~iL~~lv~vfGlfP~~l~~~iiepAv~sil~~~v~d 514 (809)
T TIGR00940 478 PAILALLVVVFGLFPALLTGSIIEPAVLSILREDVID 514 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 8889888887540024576337888888762378878