RPSBLAST alignment for GI: 254780866 and conserved domain: TIGR00940

>gnl|CDD|162123 TIGR00940, 2a6301s01, Tmonovalent cation:proton antiporter. This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. Length = 793

 Score =  112 bits (282), Expect = 2e-25
 Identities = 129/526 (24%), Positives = 225/526 (42%), Gaps = 44/526 (8%)

Query: 6   LSIVTFLPFLGVFVILFSSYLGCGRRSFFGVALGISTINFIFSLFVWSVFDKGRSSFQMI 65
            S     PF    + +           +F   L I  + F+++L ++     G      I
Sbjct: 2   HSAFILPPFAASLIPILYPSDQRIHIGWF--VLAIPLVCFLYTLGLYPYTASGGVLHYTI 59

Query: 66  EYYHWIDYF-CSYHLGVDGISILLVVLTTFLTPFCILSS--WKSIQENFREYMIAFLVLE 122
           +   W+     ++ L +DG+++L  +L T +    +L S  + S +E    +    L   
Sbjct: 60  D---WVPELGLNFTLYMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFM 116

Query: 123 SMVIGAFLSLDMLLFYIFFEASLIPMFVIIGVWGGSER-IYAAYKFFLYTFFGSIFMLFA 181
             ++G  LS +++L Y+F+E + I  F++I  W       Y A K    T FG + ML  
Sbjct: 117 GAMLGVVLSDNLILLYVFWELTSIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGG 176

Query: 182 IVVMCWEKKTSSIIDLY----AMSKFPFSIQYWMWIAFFCSFAIKIPMFPFHTWLPNAHV 237
           ++++     + SI  +     A+   P      M +    +F  K   FPFH WLP+A +
Sbjct: 177 LILLGKITGSFSIDAVIASADAIRNSPLFG-TAMVLVLLGAFT-KSAQFPFHIWLPDA-M 233

Query: 238 QAPTAGSVFL-AGIMLKMGGYGCIRFLLPLFPLASQYFAPVIFFLSLIAIIYASLVSMVQ 296
           +APT  S +L +  M+K G Y   RF  P+F     +F  V     LI +++ S  ++ Q
Sbjct: 234 EAPTPVSAYLHSATMVKAGLYLLARFT-PVFAGTEAWFWIVGLA-GLITLLWGSYFAIFQ 291

Query: 297 TDIKKLIAYSSIAHMGYVT----IGIFSGMKSGVE---------GAMFQMLSHGLVSSAL 343
            D+K ++A+S+I+ +G +     +G  S    G +          A+F +++H     +L
Sbjct: 292 QDLKGILAFSTISQLGLIMVLLGLGSPSYHYQGDDSKIYALAAVAAVFHLINHATFKGSL 351

Query: 344 FFCVGVIYDRLHTRDIFAYGGLVHNMPRYAVVMMVFTMANMGLPGTSGFIGEFLVIMSVF 403
           F   G+I     TRDI   GGL H MP    + M+ + A  G+P  +GF+ + +      
Sbjct: 352 FMAAGIIDHETGTRDIRKLGGLFHIMPITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAI 411

Query: 404 QNS-----NTVA------VLASFGVVLSALYSLWLYRKVVFGVSKCEKV-QQLKDLSLRE 451
                   +TV        +A+   V + +YSL     V FG  K E + ++  +     
Sbjct: 412 TAHLVNPFDTVTLGYLFPYVATVASVFTFVYSLRFIHGVFFGRPKPEDLPRKPHEPPRWM 471

Query: 452 RCMVYPIAVLTVFFGIYPVPIRDTFSVPLSSIIENYTLKTGYSDSV 497
                 + +L + FG++P  +      P    I    +   YS SV
Sbjct: 472 LASPDILVLLVLVFGLFPAQLTGPIIEPAVLSILREGVPDDYSLSV 517